0.012300 0.000000 0.001458 0.000000 0.026545 0.000000 0.000000 0.000000 0.016144 0.00000 0.00000 0.00000 Gan, J.H. Abdur, R. Huang, Z. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 96.76 90.00 81.301 37.672 62.378 C10 H14 N5 O7 P 347.221 y ADENOSINE-5'-MONOPHOSPHATE RNA linking C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C9 H14 N3 O8 P 323.197 y CYTIDINE-5'-MONOPHOSPHATE RNA linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O8 P 363.221 y GUANOSINE-5'-MONOPHOSPHATE RNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Mg 2 24.305 MAGNESIUM ION non-polymer C10 H15 N5 O10 P2 427.201 n 2'-DEOXYGUANOSINE-3',5'-DIPHOSPHATE DNA linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C9 H13 N2 O9 P 324.181 y URIDINE-5'-MONOPHOSPHATE RNA linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N O N 2 N P N 3 N O N 4 N O N 5 N O N 6 N C N 7 R C N 8 N O N 9 S C N 10 N O N 11 R C N 12 N O N 13 R C Y 14 N N Y 15 N C Y 16 N N Y 17 N C Y 18 N C N 19 N N Y 20 N N Y 21 N C Y 22 N N Y 23 N C N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N N N 39 S C N 40 N C N 41 N O N 42 N C N 43 N O N 44 N H N 45 N H N 46 N H N 47 N H N 48 N H N 49 N H N 50 N H N 51 N N N 52 S C N 53 N C N 54 N O N 55 N C N 56 N C N 57 N C N 58 N N N 59 N C N 60 N N N 61 N N N 62 N O N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N H N 78 N N N 79 S C N 80 N C N 81 N O N 82 N C N 83 N C N 84 N O N 85 N N N 86 N O N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N N N 96 S C N 97 N C N 98 N O N 99 N C N 100 N C N 101 N O N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N O N 112 N P N 113 N O N 114 N O N 115 N O N 116 N C N 117 R C N 118 N O N 119 S C N 120 N O N 121 R C N 122 N O N 123 R C N 124 N N N 125 N C N 126 N O N 127 N N N 128 N C N 129 N N N 130 N C N 131 N C N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N H N 146 N O N 147 N P N 148 N O N 149 N O N 150 N O N 151 N C N 152 R C N 153 N O N 154 S C N 155 N O N 156 N C N 157 R C Y 158 N N Y 159 N C Y 160 N N Y 161 N C Y 162 N C N 163 N N Y 164 N N Y 165 N C Y 166 N N Y 167 N C N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N O N 183 N P N 184 N O N 185 N O N 186 N O N 187 N C N 188 R C N 189 N O N 190 S C N 191 N O N 192 N C N 193 R C N 194 N N N 195 N C N 196 N O N 197 N N N 198 N C N 199 N N N 200 N C N 201 N C N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N O N 217 N P N 218 N O N 219 N O N 220 N O N 221 N C N 222 R C N 223 N O N 224 S C N 225 N O N 226 N C N 227 R C Y 228 N N Y 229 N C Y 230 N N Y 231 N C N 232 N C N 233 N O N 234 N N N 235 N C N 236 N N N 237 N N Y 238 N C N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N O N 254 N P N 255 N O N 256 N O N 257 N O N 258 N C N 259 R C N 260 N O N 261 S C N 262 N O N 263 N C N 264 R C N 265 N N N 266 N C N 267 N O N 268 N N N 269 N C N 270 N O N 271 N C N 272 N C N 273 N C N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N O N 290 N P N 291 N O N 292 N O N 293 N O N 294 N C N 295 R C N 296 N O N 297 S C N 298 N O N 299 R C N 300 N O N 301 R C Y 302 N N Y 303 N C Y 304 N N Y 305 N C N 306 N C N 307 N O N 308 N N N 309 N C N 310 N N N 311 N N Y 312 N C N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N N N 328 S C N 329 N C N 330 N O N 331 N C N 332 N C N 333 N C N 334 N O N 335 N N N 336 N O N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N N N 348 S C N 349 N C N 350 N O N 351 N C N 352 N C N 353 N C N 354 N O N 355 N O N 356 N O N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N N N 367 N C N 368 N C N 369 N O N 370 N O N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N N N 377 S C N 378 N C N 379 N O N 380 N C Y 381 N C Y 382 N N Y 383 N C Y 384 N C Y 385 N N N 386 N O N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N O N 398 N H N 399 N H N 400 N N N 401 S C N 402 N C N 403 N O N 404 S C N 405 N C N 406 N C N 407 N C N 408 N O N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N N N 423 S C N 424 N C N 425 N O N 426 N C N 427 N C N 428 N C N 429 N C N 430 N O N 431 N H N 432 N H N 433 N H N 434 N H N 435 N H N 436 N H N 437 N H N 438 N H N 439 N H N 440 N H N 441 N H N 442 N H N 443 N H N 444 N N N 445 S C N 446 N C N 447 N O N 448 N C N 449 N C N 450 N C N 451 N C N 452 N N N 453 N O N 454 N H N 455 N H N 456 N H N 457 N H N 458 N H N 459 N H N 460 N H N 461 N H N 462 N H N 463 N H N 464 N H N 465 N H N 466 N H N 467 N H N 468 N H N 469 N N N 470 S C N 471 N C N 472 N O N 473 N C N 474 N C N 475 N S N 476 N C N 477 N O N 478 N H N 479 N H N 480 N H N 481 N H N 482 N H N 483 N H N 484 N H N 485 N H N 486 N H N 487 N H N 488 N H N 489 N MG N 490 N P N 491 N O N 492 N O N 493 N O N 494 N P N 495 N O N 496 N O N 497 N O N 498 N O N 499 N C N 500 R C N 501 N O N 502 S C N 503 N O N 504 N C N 505 R C Y 506 N N Y 507 N C Y 508 N N Y 509 N C N 510 N C N 511 N O N 512 N N N 513 N C N 514 N N N 515 N N Y 516 N C N 517 N H N 518 N H N 519 N H N 520 N H N 521 N H N 522 N H N 523 N H N 524 N H N 525 N H N 526 N H N 527 N H N 528 N H N 529 N H N 530 N H N 531 N H N 532 N N N 533 S C N 534 N C N 535 N O N 536 N C Y 537 N C Y 538 N C Y 539 N C Y 540 N C Y 541 N C Y 542 N C N 543 N O N 544 N H N 545 N H N 546 N H N 547 N H N 548 N H N 549 N H N 550 N H N 551 N H N 552 N H N 553 N H N 554 N H N 555 N N N 556 S C N 557 N C N 558 N O N 559 N C N 560 N C N 561 N C N 562 N O N 563 N H N 564 N H N 565 N H N 566 N H N 567 N H N 568 N H N 569 N H N 570 N H N 571 N H N 572 N N N 573 S C N 574 N C N 575 N O N 576 N C N 577 N O N 578 N O N 579 N H N 580 N H N 581 N H N 582 N H N 583 N H N 584 N H N 585 N H N 586 N N N 587 S C N 588 N C N 589 N O N 590 R C N 591 N O N 592 N C N 593 N O N 594 N H N 595 N H N 596 N H N 597 N H N 598 N H N 599 N H N 600 N H N 601 N H N 602 N H N 603 N N N 604 S C N 605 N C N 606 N O N 607 N C Y 608 N C Y 609 N C Y 610 N C Y 611 N N Y 612 N C Y 613 N C Y 614 N C Y 615 N C Y 616 N C N 617 N O N 618 N H N 619 N H N 620 N H N 621 N H N 622 N H N 623 N H N 624 N H N 625 N H N 626 N H N 627 N H N 628 N H N 629 N H N 630 N N N 631 S C N 632 N C N 633 N O N 634 N C Y 635 N C Y 636 N C Y 637 N C Y 638 N C Y 639 N C Y 640 N C N 641 N O N 642 N O N 643 N H N 644 N H N 645 N H N 646 N H N 647 N H N 648 N H N 649 N H N 650 N H N 651 N H N 652 N H N 653 N H N 654 N O N 655 N P N 656 N O N 657 N O N 658 N O N 659 N C N 660 R C N 661 N O N 662 S C N 663 N O N 664 R C N 665 N O N 666 R C N 667 N N N 668 N C N 669 N O N 670 N N N 671 N C N 672 N O N 673 N C N 674 N C N 675 N H N 676 N H N 677 N H N 678 N H N 679 N H N 680 N H N 681 N H N 682 N H N 683 N H N 684 N H N 685 N H N 686 N H N 687 N H N 688 N N N 689 S C N 690 N C N 691 N O N 692 N C N 693 N C N 694 N C N 695 N O N 696 N H N 697 N H N 698 N H N 699 N H N 700 N H N 701 N H N 702 N H N 703 N H N 704 N H N 705 N H N 706 N H N 1 N sing N 2 N sing N 3 N doub N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing Y 25 N sing Y 26 N sing Y 27 N doub N 28 N sing Y 29 N sing Y 30 N sing Y 31 N doub N 32 N sing Y 33 N doub N 34 N sing N 35 N sing Y 36 N sing Y 37 N doub N 38 N sing Y 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N doub N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N doub N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N doub N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N doub N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N doub N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N doub N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N doub N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N doub N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N doub N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing Y 168 N sing Y 169 N sing Y 170 N doub N 171 N sing Y 172 N sing Y 173 N sing Y 174 N doub N 175 N sing Y 176 N doub N 177 N sing N 178 N sing Y 179 N sing Y 180 N doub N 181 N sing Y 182 N sing N 183 N sing N 184 N sing N 185 N doub N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N doub N 209 N sing N 210 N doub N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N doub N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N doub N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing Y 241 N sing Y 242 N sing Y 243 N doub N 244 N sing Y 245 N sing N 246 N sing Y 247 N doub N 248 N doub N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N doub N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N doub N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N doub N 283 N sing N 284 N sing N 285 N sing N 286 N doub N 287 N sing N 288 N sing N 289 N doub N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N doub N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing Y 318 N sing Y 319 N sing Y 320 N doub N 321 N sing Y 322 N sing N 323 N sing Y 324 N doub N 325 N doub N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N doub N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N doub N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N doub N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N doub N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N doub N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N doub N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N doub N 387 N sing N 388 N sing N 389 N sing N 390 N sing Y 391 N sing Y 392 N doub Y 393 N doub N 394 N sing Y 395 N sing N 396 N sing Y 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N doub N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N doub N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N sing N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N doub N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N sing N 462 N sing N 463 N sing N 464 N sing N 465 N sing N 466 N sing N 467 N sing N 468 N sing N 469 N sing N 470 N sing N 471 N sing N 472 N sing N 473 N sing N 474 N sing N 475 N doub N 476 N sing N 477 N sing N 478 N sing N 479 N sing N 480 N sing N 481 N sing N 482 N sing N 483 N sing N 484 N sing N 485 N sing N 486 N sing N 487 N sing N 488 N doub N 489 N sing N 490 N sing N 491 N sing N 492 N sing N 493 N sing N 494 N doub N 495 N sing N 496 N sing N 497 N sing N 498 N sing N 499 N sing N 500 N sing N 501 N sing N 502 N sing N 503 N sing N 504 N sing N 505 N sing N 506 N sing N 507 N sing N 508 N sing N 509 N sing N 510 N sing N 511 N sing N 512 N sing N 513 N sing N 514 N sing N 515 N sing Y 516 N sing Y 517 N sing Y 518 N doub N 519 N sing Y 520 N sing N 521 N sing Y 522 N doub N 523 N doub N 524 N sing N 525 N sing N 526 N sing N 527 N sing N 528 N doub N 529 N sing N 530 N sing N 531 N sing N 532 N sing N 533 N sing N 534 N sing N 535 N sing N 536 N sing N 537 N sing N 538 N doub N 539 N sing N 540 N sing N 541 N sing N 542 N sing Y 543 N doub Y 544 N sing Y 545 N sing N 546 N sing Y 547 N doub N 548 N sing Y 549 N doub N 550 N sing Y 551 N sing N 552 N sing N 553 N sing N 554 N sing N 555 N sing N 556 N sing N 557 N sing N 558 N sing N 559 N sing N 560 N sing N 561 N doub N 562 N sing N 563 N sing N 564 N sing N 565 N sing N 566 N sing N 567 N sing N 568 N sing N 569 N sing N 570 N sing N 571 N sing N 572 N sing N 573 N sing N 574 N sing N 575 N sing N 576 N sing N 577 N sing N 578 N doub N 579 N sing N 580 N sing N 581 N sing N 582 N sing N 583 N sing N 584 N sing N 585 N sing N 586 N sing N 587 N sing N 588 N sing N 589 N sing N 590 N sing N 591 N doub N 592 N sing N 593 N sing N 594 N sing N 595 N sing N 596 N sing N 597 N sing N 598 N sing N 599 N sing N 600 N sing N 601 N sing N 602 N sing N 603 N sing N 604 N sing N 605 N sing N 606 N sing N 607 N doub N 608 N sing N 609 N sing N 610 N sing N 611 N sing Y 612 N doub Y 613 N sing Y 614 N sing N 615 N sing Y 616 N doub Y 617 N sing Y 618 N sing N 619 N sing Y 620 N sing Y 621 N doub N 622 N sing Y 623 N doub N 624 N sing Y 625 N sing N 626 N sing N 627 N sing N 628 N sing N 629 N sing N 630 N sing N 631 N sing N 632 N sing N 633 N sing N 634 N sing N 635 N doub N 636 N sing N 637 N sing N 638 N sing N 639 N sing Y 640 N doub Y 641 N sing Y 642 N sing N 643 N sing Y 644 N doub N 645 N sing Y 646 N doub N 647 N sing Y 648 N sing N 649 N sing N 650 N sing N 651 N sing N 652 N sing N 653 N sing N 654 N sing N 655 N doub N 656 N sing N 657 N sing N 658 N sing N 659 N sing N 660 N sing N 661 N sing N 662 N sing N 663 N sing N 664 N sing N 665 N sing N 666 N sing N 667 N sing N 668 N sing N 669 N sing N 670 N sing N 671 N sing N 672 N sing N 673 N sing N 674 N sing N 675 N sing N 676 N sing N 677 N sing N 678 N sing N 679 N doub N 680 N sing N 681 N sing N 682 N sing N 683 N doub N 684 N sing N 685 N doub N 686 N sing N 687 N sing N 688 N sing N 689 N sing N 690 N sing N 691 N sing N 692 N sing N 693 N sing N 694 N doub N 695 N sing N 696 N sing N 697 N sing N 698 N sing N 699 N sing N 700 N sing N 701 N sing N 702 N sing N 703 N sing N 704 N sing N 705 N sing To be Published 0353 RNA/DNA hybrid in complex with RNase H catalytic domain mutant D132N 10.2210/pdb3uld/pdb pdb_00003uld 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 mirrors CCD 2011-10-25 ADSC QUANTUM 315 mirror SINGLE WAVELENGTH M x-ray 1 0.9765 1.0 5.0.3 ALS 0.9765 SYNCHROTRON ALS BEAMLINE 5.0.3 16329.478 Ribonuclease H 3.1.26.4 catalytic domain D132N 1 man polymer 1875.189 RNA (5'-R(*UP*CP*GP*AP*CP*A)-3') 1 syn polymer 1904.208 DNA (5'-D(*AP*TP*GP*TP*CP*(PGN))-3') 1 syn polymer 24.305 MAGNESIUM ION 4 syn non-polymer 18.015 water 124 nat water RNase H no no GSHMAKEEIIWESLSVDVGSQGNPGIVEYKGVDTKTGEVLFEREPIPIGTNNMGEFLAIVHGLRYLKERNSRKPIYSNSQ TAIKWVKDKKAKSTLVRNEETALIWKLVDEAEEWLNTHTYETPILKWQTDKWGEIKADYGRK GSHMAKEEIIWESLSVDVGSQGNPGIVEYKGVDTKTGEVLFEREPIPIGTNNMGEFLAIVHGLRYLKERNSRKPIYSNSQ TAIKWVKDKKAKSTLVRNEETALIWKLVDEAEEWLNTHTYETPILKWQTDKWGEIKADYGRK A polypeptide(L) no no UCGACA UCGACA B polyribonucleotide no yes (DA)(DT)(DG)(DT)(DC)(PGN) ATGTCG C polydeoxyribonucleotide n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample rnhA, BH0863 86665 Bacillus halodurans 866768 Escherichia coli BL21-Gold(DE3)pLysS AG Plasmid pET15b 1 2.36 47.85 VAPOR DIFFUSION, SITTING DROP 6.0 0.04 M Magnesium chloride, 0.05 M Sodium cacodylate, 5% MPD, pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 298K 298 -2.336 1 19 B 2 C 6 -2.330 B_C2:PGN6_C 1 -6.846 0.149 0.048 -0.177 -16.437 1 19 B 3 C 5 0.967 B_G3:DC5_C 2 -11.742 -0.186 -0.390 -0.132 -11.458 1 20 B 4 C 4 2.550 B_A4:DT4_C 3 -13.677 0.076 -0.137 -0.156 -7.507 1 19 B 5 C 3 -0.779 B_C5:DG3_C 4 -8.621 0.212 0.208 -0.227 -12.050 1 20 B 6 C 2 0.696 B_A6:DT2_C 5 -9.571 0.021 -0.296 -0.125 3.381 37.392 B B 2 3 11.425 C C 6 5 3.627 7.253 0.489 -1.138 BB_C2G3:DC5PGN6_CC 1 5.854 -9.223 36.251 -2.815 0.077 3.003 34.187 B B 3 4 9.933 C C 5 4 3.257 5.812 0.684 -1.371 BB_G3A4:DT4DC5_CC 2 0.981 -1.676 33.690 -3.218 -1.015 3.051 29.056 B B 4 5 7.832 C C 4 3 3.226 3.915 -0.733 -1.425 BB_A4C5:DG3DT4_CC 3 -1.937 3.876 28.733 -3.670 1.051 3.002 27.070 B B 5 6 13.889 C C 3 2 3.402 6.325 1.025 -1.970 BB_C5A6:DT2DG3_CC 4 8.824 -19.377 24.835 -5.848 0.097 software chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model pdbx_struct_conn_angle struct_conn struct_ref_seq_dif struct_site repository Initial release Refinement description Data collection Database references Derived calculations Refinement description 1 0 2012-11-14 1 1 2017-11-08 1 2 2023-09-13 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id SELENIUM DERIVATIZED RNA/DNA HYBRID IN COMPLEX WITH RNASE H CATALYTIC DOMAIN MUTANT D132N RCSB Y RCSB 2011-11-10 REL REL MG MAGNESIUM ION HOH water 3TWH PDB entry 3TWH PDB experimental model MG 1 4 MG MG 201 A MG 2 4 MG MG 202 A MG 3 4 MG MG 203 A MG 4 4 MG MG 204 A HOH 1 5 HOH HOH 301 A HOH 5 5 HOH HOH 302 A HOH 6 5 HOH HOH 303 A HOH 7 5 HOH HOH 304 A HOH 8 5 HOH HOH 305 A HOH 9 5 HOH HOH 306 A HOH 10 5 HOH HOH 307 A HOH 11 5 HOH HOH 308 A HOH 13 5 HOH HOH 309 A HOH 15 5 HOH HOH 310 A HOH 16 5 HOH HOH 311 A HOH 17 5 HOH HOH 312 A HOH 19 5 HOH HOH 313 A HOH 20 5 HOH HOH 314 A HOH 22 5 HOH HOH 315 A HOH 24 5 HOH HOH 316 A HOH 25 5 HOH HOH 317 A HOH 26 5 HOH HOH 318 A HOH 28 5 HOH HOH 319 A HOH 29 5 HOH HOH 320 A HOH 30 5 HOH HOH 321 A HOH 31 5 HOH HOH 322 A HOH 32 5 HOH HOH 323 A HOH 33 5 HOH HOH 324 A HOH 34 5 HOH HOH 325 A HOH 38 5 HOH HOH 326 A HOH 39 5 HOH HOH 327 A HOH 41 5 HOH HOH 328 A HOH 44 5 HOH HOH 329 A HOH 45 5 HOH HOH 330 A HOH 46 5 HOH HOH 331 A HOH 47 5 HOH HOH 332 A HOH 48 5 HOH HOH 333 A HOH 49 5 HOH HOH 334 A HOH 51 5 HOH HOH 335 A HOH 52 5 HOH HOH 336 A HOH 53 5 HOH HOH 337 A HOH 54 5 HOH HOH 338 A HOH 2 5 HOH HOH 339 A HOH 3 5 HOH HOH 340 A HOH 4 5 HOH HOH 341 A HOH 56 5 HOH HOH 342 A HOH 57 5 HOH HOH 343 A HOH 58 5 HOH HOH 344 A HOH 59 5 HOH HOH 345 A HOH 60 5 HOH HOH 346 A HOH 61 5 HOH HOH 347 A HOH 62 5 HOH HOH 348 A HOH 64 5 HOH HOH 349 A HOH 65 5 HOH HOH 350 A HOH 66 5 HOH HOH 351 A HOH 67 5 HOH HOH 352 A HOH 68 5 HOH HOH 353 A HOH 69 5 HOH HOH 354 A HOH 70 5 HOH HOH 355 A HOH 73 5 HOH HOH 356 A HOH 74 5 HOH HOH 357 A HOH 75 5 HOH HOH 358 A HOH 76 5 HOH HOH 359 A HOH 77 5 HOH HOH 360 A HOH 78 5 HOH HOH 361 A HOH 79 5 HOH HOH 362 A HOH 80 5 HOH HOH 363 A HOH 81 5 HOH HOH 364 A HOH 82 5 HOH HOH 365 A HOH 83 5 HOH HOH 366 A HOH 84 5 HOH HOH 367 A HOH 86 5 HOH HOH 368 A HOH 87 5 HOH HOH 369 A HOH 88 5 HOH HOH 370 A HOH 89 5 HOH HOH 371 A HOH 90 5 HOH HOH 372 A HOH 91 5 HOH HOH 373 A HOH 92 5 HOH HOH 374 A HOH 94 5 HOH HOH 375 A HOH 96 5 HOH HOH 376 A HOH 97 5 HOH HOH 377 A HOH 98 5 HOH HOH 378 A HOH 99 5 HOH HOH 379 A HOH 100 5 HOH HOH 380 A HOH 103 5 HOH HOH 381 A HOH 104 5 HOH HOH 382 A HOH 105 5 HOH HOH 383 A HOH 106 5 HOH HOH 384 A HOH 107 5 HOH HOH 385 A HOH 108 5 HOH HOH 386 A HOH 109 5 HOH HOH 387 A HOH 110 5 HOH HOH 388 A HOH 111 5 HOH HOH 389 A HOH 112 5 HOH HOH 390 A HOH 113 5 HOH HOH 391 A HOH 114 5 HOH HOH 392 A HOH 115 5 HOH HOH 393 A HOH 116 5 HOH HOH 394 A HOH 120 5 HOH HOH 395 A HOH 123 5 HOH HOH 396 A HOH 124 5 HOH HOH 397 A HOH 14 5 HOH HOH 101 B HOH 35 5 HOH HOH 102 B HOH 36 5 HOH HOH 103 B HOH 42 5 HOH HOH 104 B HOH 50 5 HOH HOH 105 B HOH 63 5 HOH HOH 106 B HOH 71 5 HOH HOH 107 B HOH 93 5 HOH HOH 108 B HOH 95 5 HOH HOH 109 B HOH 117 5 HOH HOH 110 B HOH 121 5 HOH HOH 111 B HOH 122 5 HOH HOH 112 B HOH 12 5 HOH HOH 101 C HOH 18 5 HOH HOH 102 C HOH 21 5 HOH HOH 103 C HOH 23 5 HOH HOH 104 C HOH 27 5 HOH HOH 105 C HOH 37 5 HOH HOH 106 C HOH 40 5 HOH HOH 107 C HOH 43 5 HOH HOH 108 C HOH 55 5 HOH HOH 109 C HOH 72 5 HOH HOH 110 C HOH 85 5 HOH HOH 111 C HOH 101 5 HOH HOH 112 C HOH 102 5 HOH HOH 113 C HOH 118 5 HOH HOH 114 C HOH 119 5 HOH HOH 115 C n 1 55 A n 2 56 A n 3 57 A n 4 58 A n 5 59 A n 6 60 A GLU 61 n 7 GLU 61 A GLU 62 n 8 GLU 62 A ILE 63 n 9 ILE 63 A ILE 64 n 10 ILE 64 A TRP 65 n 11 TRP 65 A GLU 66 n 12 GLU 66 A SER 67 n 13 SER 67 A LEU 68 n 14 LEU 68 A SER 69 n 15 SER 69 A VAL 70 n 16 VAL 70 A ASP 71 n 17 ASP 71 A VAL 72 n 18 VAL 72 A GLY 73 n 19 GLY 73 A SER 74 n 20 SER 74 A GLN 75 n 21 GLN 75 A GLY 76 n 22 GLY 76 A ASN 77 n 23 ASN 77 A PRO 78 n 24 PRO 78 A GLY 79 n 25 GLY 79 A ILE 80 n 26 ILE 80 A VAL 81 n 27 VAL 81 A GLU 82 n 28 GLU 82 A TYR 83 n 29 TYR 83 A LYS 84 n 30 LYS 84 A GLY 85 n 31 GLY 85 A VAL 86 n 32 VAL 86 A ASP 87 n 33 ASP 87 A THR 88 n 34 THR 88 A LYS 89 n 35 LYS 89 A THR 90 n 36 THR 90 A GLY 91 n 37 GLY 91 A GLU 92 n 38 GLU 92 A VAL 93 n 39 VAL 93 A LEU 94 n 40 LEU 94 A PHE 95 n 41 PHE 95 A GLU 96 n 42 GLU 96 A ARG 97 n 43 ARG 97 A GLU 98 n 44 GLU 98 A PRO 99 n 45 PRO 99 A ILE 100 n 46 ILE 100 A PRO 101 n 47 PRO 101 A ILE 102 n 48 ILE 102 A GLY 103 n 49 GLY 103 A THR 104 n 50 THR 104 A ASN 105 n 51 ASN 105 A ASN 106 n 52 ASN 106 A MET 107 n 53 MET 107 A GLY 108 n 54 GLY 108 A GLU 109 n 55 GLU 109 A PHE 110 n 56 PHE 110 A LEU 111 n 57 LEU 111 A ALA 112 n 58 ALA 112 A ILE 113 n 59 ILE 113 A VAL 114 n 60 VAL 114 A HIS 115 n 61 HIS 115 A GLY 116 n 62 GLY 116 A LEU 117 n 63 LEU 117 A ARG 118 n 64 ARG 118 A TYR 119 n 65 TYR 119 A LEU 120 n 66 LEU 120 A LYS 121 n 67 LYS 121 A GLU 122 n 68 GLU 122 A ARG 123 n 69 ARG 123 A ASN 124 n 70 ASN 124 A SER 125 n 71 SER 125 A ARG 126 n 72 ARG 126 A LYS 127 n 73 LYS 127 A PRO 128 n 74 PRO 128 A ILE 129 n 75 ILE 129 A TYR 130 n 76 TYR 130 A SER 131 n 77 SER 131 A ASN 132 n 78 ASN 132 A SER 133 n 79 SER 133 A GLN 134 n 80 GLN 134 A THR 135 n 81 THR 135 A ALA 136 n 82 ALA 136 A ILE 137 n 83 ILE 137 A LYS 138 n 84 LYS 138 A TRP 139 n 85 TRP 139 A VAL 140 n 86 VAL 140 A LYS 141 n 87 LYS 141 A ASP 142 n 88 ASP 142 A LYS 143 n 89 LYS 143 A LYS 144 n 90 LYS 144 A ALA 145 n 91 ALA 145 A LYS 146 n 92 LYS 146 A SER 147 n 93 SER 147 A THR 148 n 94 THR 148 A LEU 149 n 95 LEU 149 A VAL 150 n 96 VAL 150 A ARG 151 n 97 ARG 151 A ASN 152 n 98 ASN 152 A GLU 153 n 99 GLU 153 A GLU 154 n 100 GLU 154 A THR 155 n 101 THR 155 A ALA 156 n 102 ALA 156 A LEU 157 n 103 LEU 157 A ILE 158 n 104 ILE 158 A TRP 159 n 105 TRP 159 A LYS 160 n 106 LYS 160 A LEU 161 n 107 LEU 161 A VAL 162 n 108 VAL 162 A ASP 163 n 109 ASP 163 A GLU 164 n 110 GLU 164 A ALA 165 n 111 ALA 165 A GLU 166 n 112 GLU 166 A GLU 167 n 113 GLU 167 A TRP 168 n 114 TRP 168 A LEU 169 n 115 LEU 169 A ASN 170 n 116 ASN 170 A THR 171 n 117 THR 171 A HIS 172 n 118 HIS 172 A THR 173 n 119 THR 173 A TYR 174 n 120 TYR 174 A GLU 175 n 121 GLU 175 A THR 176 n 122 THR 176 A PRO 177 n 123 PRO 177 A ILE 178 n 124 ILE 178 A LEU 179 n 125 LEU 179 A LYS 180 n 126 LYS 180 A TRP 181 n 127 TRP 181 A GLN 182 n 128 GLN 182 A THR 183 n 129 THR 183 A ASP 184 n 130 ASP 184 A LYS 185 n 131 LYS 185 A TRP 186 n 132 TRP 186 A GLY 187 n 133 GLY 187 A GLU 188 n 134 GLU 188 A ILE 189 n 135 ILE 189 A LYS 190 n 136 LYS 190 A ALA 191 n 137 ALA 191 A ASP 192 n 138 ASP 192 A TYR 193 n 139 TYR 193 A n 140 194 A n 141 195 A n 142 196 A U 1 n 1 U 1 B C 2 n 2 C 2 B G 3 n 3 G 3 B A 4 n 4 A 4 B C 5 n 5 C 5 B A 6 n 6 A 6 B DA 1 n 1 DA 1 C DT 2 n 2 DT 2 C DG 3 n 3 DG 3 C DT 4 n 4 DT 4 C DC 5 n 5 DC 5 C PGN 6 n 6 PGN 6 C author_and_software_defined_assembly PISA 3 trimeric 2670 -37 8580 A ASP 71 A A OD1 ASP 17 1_555 A MG 201 D MG MG 1_555 A GLU 109 A OE2 GLU 55 1_555 99.3 A ASP 71 A A OD1 ASP 17 1_555 A MG 201 D MG MG 1_555 A ASN 132 A OD1 ASN 78 1_555 138.6 A GLU 109 A OE2 GLU 55 1_555 A MG 201 D MG MG 1_555 A ASN 132 A OD1 ASN 78 1_555 99.7 A ASP 71 A A OD1 ASP 17 1_555 A MG 201 D MG MG 1_555 B A 6 B O3' A 6 1_555 124.6 A GLU 109 A OE2 GLU 55 1_555 A MG 201 D MG MG 1_555 B A 6 B O3' A 6 1_555 95.2 A ASN 132 A OD1 ASN 78 1_555 A MG 201 D MG MG 1_555 B A 6 B O3' A 6 1_555 89.8 A ASP 71 A A OD2 ASP 17 1_555 A MG 202 E MG MG 1_555 A ASP 192 A OD2 ASP 138 1_555 95.2 A ASP 71 A A OD2 ASP 17 1_555 A MG 202 E MG MG 1_555 A HOH 366 H O HOH 1_555 102.6 A ASP 192 A OD2 ASP 138 1_555 A MG 202 E MG MG 1_555 A HOH 366 H O HOH 1_555 82.6 A ASP 71 A A OD2 ASP 17 1_555 A MG 202 E MG MG 1_555 A HOH 383 H O HOH 1_555 82.5 A ASP 192 A OD2 ASP 138 1_555 A MG 202 E MG MG 1_555 A HOH 383 H O HOH 1_555 97.6 A HOH 366 H O HOH 1_555 A MG 202 E MG MG 1_555 A HOH 383 H O HOH 1_555 174.9 A HOH 338 H O HOH 1_555 A MG 203 F MG MG 1_555 A HOH 356 H O HOH 1_555 84.6 C PGN 6 2'-DEOXYGUANOSINE-3',5'-DIPHOSPHATE C PGN 6 DG 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O ILE 100 A O ILE 46 A N VAL 81 A N VAL 27 A O VAL 86 A O VAL 32 A N SER 69 A N SER 15 A N LEU 68 A N LEU 14 A O TYR 130 A O TYR 76 A N ILE 129 A N ILE 75 A O LEU 179 A O LEU 125 1 A GLY 55 A GLY 1 1 Y 1 A SER 56 A SER 2 1 Y 1 A HIS 57 A HIS 3 1 Y 1 A MET 58 A MET 4 1 Y 1 A ALA 59 A ALA 5 1 Y 1 A LYS 60 A LYS 6 1 Y 1 A GLY 194 A GLY 140 1 Y 1 A ARG 195 A ARG 141 1 Y 1 A LYS 196 A LYS 142 1 Y 1 A A MG O MG HOH 204 303 1.70 1 A A O O HOH HOH 317 389 2.13 1 20.72 1.50 110.10 130.82 A A A CB CA C ALA ALA ALA 191 191 191 B B N 1 -13.77 1.90 104.00 90.23 B B B O3' P O5' U C C 1 2 2 Y 1 -8.18 0.80 109.40 101.22 B B B O5' C5' C4' C C C 2 2 2 N 1 -3.29 0.50 129.30 126.01 B B B N1 C2 N3 A A A 6 6 6 N 1 -6.60 0.90 105.70 99.10 C C C O5' P OP2 DT DT DT 2 2 2 N 1 2.50 0.30 108.30 110.80 C C C O4' C1' N1 DT DT DT 4 4 4 N 1 A A CA C ALA ALA 191 191 0.408 0.026 1.525 1.933 B N 1 B B O5' C5' A A 4 4 -0.061 0.009 1.420 1.359 N 21.836 0.11 0.00 -0.58 1.03 0.00 -1.27 0.959 0.941 0.23463 0.19366 0.19589 1.60 30 1201 25140 22402 5.1 93.89 2.080 0.072 RANDOM 1 THROUGHOUT 0 FOURIER SYNTHESIS 0.100 0.80 0.80 1.40 PDB entry 3TWH MAXIMUM LIKELIHOOD MASK 1.60 30 124 1462 4 249 1085 0.012 0.022 1408 1.560 2.175 1966 5.699 5.000 139 35.193 25.370 54 14.499 15.000 208 13.428 15.000 5 0.096 0.200 221 0.007 0.021 976 0.882 1.500 672 1.639 2.000 1096 2.304 3.000 736 3.540 4.500 867 0.297 0.267 1.639 57 1107 1164 20 62.88 1.6 61.94 3ULD 25140 23657 0 0 0.08 1 16.9 4.8 94.1 0.08 1.6 1.639 16.9 25140 1 4.8 94.1 data collection HKL-2000 refinement REFMAC 5.5.0109 data reduction HKL-2000 data scaling HKL-2000 High resolution structure of DNA/RNA hybrid in complex with RNase H catalytic domain D132N mutant 1 N N 2 N N 3 N N 4 N N 4 N N 4 N N 4 N N 5 N N 5 N N 5 N N A THR 104 A THR 50 HELX_P A ARG 123 A ARG 69 1 1 20 A SER 133 A SER 79 HELX_P A LYS 143 A LYS 89 1 2 11 A THR 155 A THR 101 HELX_P A ASN 170 A ASN 116 1 3 16 A GLN 182 A GLN 128 HELX_P A GLY 187 A GLY 133 1 4 6 covale 1.597 both C DC 5 C O3' DC 5 1_555 C PGN 6 C P PGN 6 1_555 metalc 2.221 A A ASP 71 A OD1 ASP 17 1_555 A MG 201 D MG MG 1_555 metalc 1.993 A A ASP 71 A OD2 ASP 17 1_555 A MG 202 E MG MG 1_555 metalc 2.089 A GLU 109 A OE2 GLU 55 1_555 A MG 201 D MG MG 1_555 metalc 2.071 A ASN 132 A OD1 ASN 78 1_555 A MG 201 D MG MG 1_555 metalc 2.473 A ASP 192 A OD2 ASP 138 1_555 A MG 202 E MG MG 1_555 metalc 2.737 A MG 201 D MG MG 1_555 B A 6 B O3' A 6 1_555 metalc 2.009 A MG 202 E MG MG 1_555 A HOH 366 H O HOH 1_555 metalc 1.781 A MG 202 E MG MG 1_555 A HOH 383 H O HOH 1_555 metalc 1.908 A MG 203 F MG MG 1_555 A HOH 338 H O HOH 1_555 metalc 1.915 A MG 203 F MG MG 1_555 A HOH 356 H O HOH 1_555 hydrog WATSON-CRICK B C 2 B N3 C 2 1_555 C PGN 6 C N1 PGN 6 1_555 hydrog WATSON-CRICK B C 2 B N4 C 2 1_555 C PGN 6 C O6 PGN 6 1_555 hydrog WATSON-CRICK B C 2 B O2 C 2 1_555 C PGN 6 C N2 PGN 6 1_555 hydrog WATSON-CRICK B G 3 B N1 G 3 1_555 C DC 5 C N3 DC 5 1_555 hydrog WATSON-CRICK B G 3 B N2 G 3 1_555 C DC 5 C O2 DC 5 1_555 hydrog WATSON-CRICK B G 3 B O6 G 3 1_555 C DC 5 C N4 DC 5 1_555 hydrog WATSON-CRICK B A 4 B N1 A 4 1_555 C DT 4 C N3 DT 4 1_555 hydrog WATSON-CRICK B A 4 B N6 A 4 1_555 C DT 4 C O4 DT 4 1_555 hydrog WATSON-CRICK B C 5 B N3 C 5 1_555 C DG 3 C N1 DG 3 1_555 hydrog WATSON-CRICK B C 5 B N4 C 5 1_555 C DG 3 C O6 DG 3 1_555 hydrog WATSON-CRICK B C 5 B O2 C 5 1_555 C DG 3 C N2 DG 3 1_555 hydrog WATSON-CRICK B A 6 B N1 A 6 1_555 C DT 2 C N3 DT 2 1_555 hydrog WATSON-CRICK B A 6 B N6 A 6 1_555 C DT 2 C O4 DT 2 1_555 HYDROLASE/RNA/DNA RNase H, DNA/RNA hybrid, ENDONUCLEASE, HYDROLASE, MAGNESIUM, RIBONUCLEASE H, HYDROLASE-RNA-DNA complex A ASN 77 A ASN 23 1 A PRO 78 A PRO 24 1.41 RNH1_BACHD UNP 1 59 Q9KEI9 AKEEIIWESLSVDVGSQGNPGIVEYKGVDTKTGEVLFEREPIPIGTNNMGEFLAIVHGLRYLKERNSRKPIYSDSQTAIK WVKDKKAKSTLVRNEETALIWKLVDEAEEWLNTHTYETPILKWQTDKWGEIKADYGRK 3ULD PDB 2 3ULD 3ULD PDB 3 3ULD 59 196 3ULD 59 196 Q9KEI9 A 1 5 142 1 6 3ULD 1 6 3ULD B 2 1 6 1 6 3ULD 1 6 3ULD C 3 1 6 1 expression tag GLY 55 3ULD A Q9KEI9 UNP 1 1 expression tag SER 56 3ULD A Q9KEI9 UNP 2 1 expression tag HIS 57 3ULD A Q9KEI9 UNP 3 1 expression tag MET 58 3ULD A Q9KEI9 UNP 4 1 ASP engineered mutation ASN 132 3ULD A Q9KEI9 UNP 132 78 5 anti-parallel anti-parallel parallel parallel A VAL 93 A VAL 39 A GLY 103 A GLY 49 A GLY 79 A GLY 25 A ASP 87 A ASP 33 A LEU 68 A LEU 14 A GLN 75 A GLN 21 A ILE 129 A ILE 75 A SER 131 A SER 77 A ILE 178 A ILE 124 A LYS 180 A LYS 126 BINDING SITE FOR RESIDUE MG A 201 A MG 201 Software 6 BINDING SITE FOR RESIDUE MG A 202 A MG 202 Software 6 BINDING SITE FOR RESIDUE MG A 203 A MG 203 Software 4 BINDING SITE FOR RESIDUE MG A 204 A MG 204 Software 3 A ASP 71 A ASP 17 6 1_555 A GLU 109 A GLU 55 6 1_555 A ASN 132 A ASN 78 6 1_555 A HOH 301 H HOH 6 1_555 A HOH 302 H HOH 6 1_555 B A 6 B A 6 6 1_555 A ASP 71 A ASP 17 6 1_555 A VAL 72 A VAL 18 6 1_555 A ASP 192 A ASP 138 6 1_555 A HOH 366 H HOH 6 1_555 A HOH 383 H HOH 6 1_555 B U 1 B U 1 6 4_546 A ARG 118 A ARG 64 4 1_555 A TRP 168 A TRP 114 4 1_555 A HOH 338 H HOH 4 1_555 A HOH 356 H HOH 4 1_555 A TYR 83 A TYR 29 3 1_555 A ARG 97 A ARG 43 3 1_555 A HOH 303 H HOH 3 1_555 5 C 1 2 1