0.022937
0.000000
0.000000
0.000000
0.010167
0.000000
0.000000
0.000000
0.010065
0.000000
0.000000
0.000000
Tempel, W.
Chao, X.
Bian, C.
Li, Y.
Bountra, C.
Weigelt, J.
Arrowsmith, C.H.
Edwards, A.M.
Min, J.
Structural Genomics Consortium (SGC)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.000
90.000
90.000
43.598
98.354
99.358
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
UNKNOWN ATOM OR ION
non-polymer
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
R
C
N
309
N
O
N
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
N
Y
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
N
359
N
O
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
N
N
373
S
C
N
374
N
C
N
375
N
O
N
376
N
C
N
377
N
C
N
378
N
C
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
Y
345
N
doub
Y
346
N
sing
Y
347
N
sing
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
US
Sci.Signal.
1937-9145
5
ra39
ra39
10.1126/scisignal.2002979
22649097
Sequence-Specific Recognition of a PxLPxI/L Motif by an Ankyrin Repeat Tumbler Lock.
2012
10.2210/pdb3uxg/pdb
pdb_00003uxg
100
1
1
CCD
2011-07-21
ADSC QUANTUM 315
SINGLE WAVELENGTH
M
x-ray
1
0.97911
1.0
19-ID
APS
0.97911
SYNCHROTRON
APS BEAMLINE 19-ID
18907.254
DNA-binding protein RFXANK
UNP residues 90-260
R199H
1
man
polymer
1796.113
Histone deacetylase 4
3.5.1.98
1
syn
polymer
UNKNOWN ATOM OR ION
5
syn
non-polymer
18.015
water
117
nat
water
Ankyrin repeat family A protein 1, Regulatory factor X subunit B, RFX-B, Regulatory factor X-associated ankyrin-containing protein
HD4
no
no
GDSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGG
YTDIVGLLLERDVDINIYDWNGGTPLLYAVHGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILK
LFQSNLVPADPE
GDSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGG
YTDIVGLLLERDVDINIYDWNGGTPLLYAVHGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILK
LFQSNLVPADPE
A
polypeptide(L)
no
no
LPLYTSPSLPNITLGLP
LPLYTSPSLPNITLGLP
B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
RFXANK, ANKRA1, RFXB
9606
Homo sapiens
562
Escherichia coli
BL21-V2R-pRARE2
pET28-MHL
1
2.7
54.5
VAPOR DIFFUSION, SITTING DROP
7.5
25% PEG3350, 0.2M sodium chloride, 0.1M HEPES, pH 7.5, vapor diffusion, sitting drop, temperature 291K
291
Structural Genomics Consortium
SGC
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_struct_special_symmetry
struct_ref_seq_dif
repository
Initial release
Data collection
Database references
Derived calculations
Refinement description
1
0
2012-06-13
1
1
2023-09-13
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
Y
RCSB
Y
RCSB
2011-12-05
REL
REL
UNX
UNKNOWN ATOM OR ION
HOH
water
synthetic peptide
9606
human
Homo sapiens
sample
3SO8
pdb entry 3SO8
PDB
experimental model
UNX
2
3
UNX
UNX
2
A
UNX
3
3
UNX
UNX
3
A
UNX
4
3
UNX
UNX
4
A
UNX
5
3
UNX
UNX
5
A
UNX
6
3
UNX
UNX
6
A
HOH
9
4
HOH
HOH
9
A
HOH
10
4
HOH
HOH
10
A
HOH
11
4
HOH
HOH
11
A
HOH
12
4
HOH
HOH
12
A
HOH
13
4
HOH
HOH
13
A
HOH
14
4
HOH
HOH
14
A
HOH
15
4
HOH
HOH
15
A
HOH
16
4
HOH
HOH
16
A
HOH
17
4
HOH
HOH
17
A
HOH
18
4
HOH
HOH
18
A
HOH
19
4
HOH
HOH
19
A
HOH
20
4
HOH
HOH
20
A
HOH
21
4
HOH
HOH
21
A
HOH
22
4
HOH
HOH
22
A
HOH
24
4
HOH
HOH
24
A
HOH
25
4
HOH
HOH
25
A
HOH
26
4
HOH
HOH
26
A
HOH
28
4
HOH
HOH
28
A
HOH
31
4
HOH
HOH
31
A
HOH
33
4
HOH
HOH
33
A
HOH
36
4
HOH
HOH
36
A
HOH
40
4
HOH
HOH
40
A
HOH
41
4
HOH
HOH
41
A
HOH
42
4
HOH
HOH
42
A
HOH
43
4
HOH
HOH
43
A
HOH
44
4
HOH
HOH
44
A
HOH
46
4
HOH
HOH
46
A
HOH
48
4
HOH
HOH
48
A
HOH
51
4
HOH
HOH
51
A
HOH
52
4
HOH
HOH
52
A
HOH
53
4
HOH
HOH
53
A
HOH
54
4
HOH
HOH
54
A
HOH
55
4
HOH
HOH
55
A
HOH
56
4
HOH
HOH
56
A
HOH
57
4
HOH
HOH
57
A
HOH
60
4
HOH
HOH
60
A
HOH
61
4
HOH
HOH
61
A
HOH
62
4
HOH
HOH
62
A
HOH
64
4
HOH
HOH
64
A
HOH
66
4
HOH
HOH
66
A
HOH
68
4
HOH
HOH
68
A
HOH
69
4
HOH
HOH
69
A
HOH
72
4
HOH
HOH
72
A
HOH
75
4
HOH
HOH
75
A
HOH
76
4
HOH
HOH
76
A
HOH
77
4
HOH
HOH
77
A
HOH
78
4
HOH
HOH
78
A
HOH
79
4
HOH
HOH
79
A
HOH
80
4
HOH
HOH
80
A
HOH
81
4
HOH
HOH
81
A
HOH
82
4
HOH
HOH
82
A
HOH
83
4
HOH
HOH
83
A
HOH
84
4
HOH
HOH
84
A
HOH
88
4
HOH
HOH
88
A
HOH
2
4
HOH
HOH
261
A
HOH
4
4
HOH
HOH
262
A
HOH
5
4
HOH
HOH
263
A
HOH
6
4
HOH
HOH
264
A
HOH
89
4
HOH
HOH
265
A
HOH
91
4
HOH
HOH
266
A
HOH
92
4
HOH
HOH
267
A
HOH
93
4
HOH
HOH
268
A
HOH
97
4
HOH
HOH
269
A
HOH
98
4
HOH
HOH
270
A
HOH
101
4
HOH
HOH
271
A
HOH
102
4
HOH
HOH
272
A
HOH
107
4
HOH
HOH
273
A
HOH
108
4
HOH
HOH
274
A
HOH
114
4
HOH
HOH
275
A
HOH
115
4
HOH
HOH
276
A
HOH
116
4
HOH
HOH
277
A
HOH
117
4
HOH
HOH
278
A
HOH
119
4
HOH
HOH
279
A
HOH
120
4
HOH
HOH
280
A
HOH
124
4
HOH
HOH
281
A
HOH
127
4
HOH
HOH
282
A
HOH
128
4
HOH
HOH
283
A
HOH
131
4
HOH
HOH
284
A
HOH
133
4
HOH
HOH
285
A
HOH
134
4
HOH
HOH
286
A
HOH
135
4
HOH
HOH
287
A
HOH
138
4
HOH
HOH
288
A
HOH
139
4
HOH
HOH
289
A
HOH
141
4
HOH
HOH
290
A
HOH
148
4
HOH
HOH
291
A
HOH
152
4
HOH
HOH
292
A
HOH
153
4
HOH
HOH
293
A
HOH
157
4
HOH
HOH
294
A
HOH
162
4
HOH
HOH
295
A
HOH
164
4
HOH
HOH
296
A
HOH
165
4
HOH
HOH
297
A
HOH
167
4
HOH
HOH
298
A
HOH
168
4
HOH
HOH
299
A
HOH
169
4
HOH
HOH
300
A
HOH
170
4
HOH
HOH
301
A
HOH
171
4
HOH
HOH
302
A
HOH
172
4
HOH
HOH
303
A
HOH
173
4
HOH
HOH
304
A
HOH
174
4
HOH
HOH
305
A
HOH
175
4
HOH
HOH
306
A
HOH
177
4
HOH
HOH
307
A
HOH
178
4
HOH
HOH
308
A
HOH
179
4
HOH
HOH
309
A
HOH
180
4
HOH
HOH
310
A
HOH
181
4
HOH
HOH
311
A
HOH
182
4
HOH
HOH
312
A
HOH
37
4
HOH
HOH
37
B
HOH
47
4
HOH
HOH
47
B
HOH
96
4
HOH
HOH
96
B
HOH
99
4
HOH
HOH
99
B
HOH
106
4
HOH
HOH
106
B
HOH
109
4
HOH
HOH
109
B
HOH
118
4
HOH
HOH
118
B
HOH
126
4
HOH
HOH
126
B
HOH
151
4
HOH
HOH
151
B
HOH
156
4
HOH
HOH
156
B
HOH
176
4
HOH
HOH
176
B
n
1
89
A
n
2
90
A
SER
91
n
3
SER
91
A
LEU
92
n
4
LEU
92
A
SER
93
n
5
SER
93
A
ILE
94
n
6
ILE
94
A
HIS
95
n
7
HIS
95
A
GLN
96
n
8
GLN
96
A
LEU
97
n
9
LEU
97
A
ALA
98
n
10
ALA
98
A
ALA
99
n
11
ALA
99
A
GLN
100
n
12
GLN
100
A
GLY
101
n
13
GLY
101
A
GLU
102
n
14
GLU
102
A
LEU
103
n
15
LEU
103
A
ASP
104
n
16
ASP
104
A
GLN
105
n
17
GLN
105
A
LEU
106
n
18
LEU
106
A
LYS
107
n
19
LYS
107
A
GLU
108
n
20
GLU
108
A
HIS
109
n
21
HIS
109
A
LEU
110
n
22
LEU
110
A
ARG
111
n
23
ARG
111
A
LYS
112
n
24
LYS
112
A
GLY
113
n
25
GLY
113
A
ASP
114
n
26
ASP
114
A
ASN
115
n
27
ASN
115
A
LEU
116
n
28
LEU
116
A
VAL
117
n
29
VAL
117
A
ASN
118
n
30
ASN
118
A
LYS
119
n
31
LYS
119
A
PRO
120
n
32
PRO
120
A
ASP
121
n
33
ASP
121
A
GLU
122
n
34
GLU
122
A
ARG
123
n
35
ARG
123
A
GLY
124
n
36
GLY
124
A
PHE
125
n
37
PHE
125
A
THR
126
n
38
THR
126
A
PRO
127
n
39
PRO
127
A
LEU
128
n
40
LEU
128
A
ILE
129
n
41
ILE
129
A
TRP
130
n
42
TRP
130
A
ALA
131
n
43
ALA
131
A
SER
132
n
44
SER
132
A
ALA
133
n
45
ALA
133
A
PHE
134
n
46
PHE
134
A
GLY
135
n
47
GLY
135
A
GLU
136
n
48
GLU
136
A
ILE
137
n
49
ILE
137
A
GLU
138
n
50
GLU
138
A
THR
139
n
51
THR
139
A
VAL
140
n
52
VAL
140
A
ARG
141
n
53
ARG
141
A
PHE
142
n
54
PHE
142
A
LEU
143
n
55
LEU
143
A
LEU
144
n
56
LEU
144
A
GLU
145
n
57
GLU
145
A
TRP
146
n
58
TRP
146
A
GLY
147
n
59
GLY
147
A
ALA
148
n
60
ALA
148
A
ASP
149
n
61
ASP
149
A
PRO
150
n
62
PRO
150
A
HIS
151
n
63
HIS
151
A
ILE
152
n
64
ILE
152
A
LEU
153
n
65
LEU
153
A
ALA
154
n
66
ALA
154
A
LYS
155
n
67
LYS
155
A
GLU
156
n
68
GLU
156
A
ARG
157
n
69
ARG
157
A
GLU
158
n
70
GLU
158
A
SER
159
n
71
SER
159
A
ALA
160
n
72
ALA
160
A
LEU
161
n
73
LEU
161
A
SER
162
n
74
SER
162
A
LEU
163
n
75
LEU
163
A
ALA
164
n
76
ALA
164
A
SER
165
n
77
SER
165
A
THR
166
n
78
THR
166
A
GLY
167
n
79
GLY
167
A
GLY
168
n
80
GLY
168
A
TYR
169
n
81
TYR
169
A
THR
170
n
82
THR
170
A
ASP
171
n
83
ASP
171
A
ILE
172
n
84
ILE
172
A
VAL
173
n
85
VAL
173
A
GLY
174
n
86
GLY
174
A
LEU
175
n
87
LEU
175
A
LEU
176
n
88
LEU
176
A
LEU
177
n
89
LEU
177
A
GLU
178
n
90
GLU
178
A
ARG
179
n
91
ARG
179
A
ASP
180
n
92
ASP
180
A
VAL
181
n
93
VAL
181
A
ASP
182
n
94
ASP
182
A
ILE
183
n
95
ILE
183
A
ASN
184
n
96
ASN
184
A
ILE
185
n
97
ILE
185
A
TYR
186
n
98
TYR
186
A
ASP
187
n
99
ASP
187
A
TRP
188
n
100
TRP
188
A
ASN
189
n
101
ASN
189
A
GLY
190
n
102
GLY
190
A
GLY
191
n
103
GLY
191
A
THR
192
n
104
THR
192
A
PRO
193
n
105
PRO
193
A
LEU
194
n
106
LEU
194
A
LEU
195
n
107
LEU
195
A
TYR
196
n
108
TYR
196
A
ALA
197
n
109
ALA
197
A
VAL
198
n
110
VAL
198
A
HIS
199
n
111
HIS
199
A
GLY
200
n
112
GLY
200
A
ASN
201
n
113
ASN
201
A
HIS
202
n
114
HIS
202
A
VAL
203
n
115
VAL
203
A
LYS
204
n
116
LYS
204
A
CYS
205
n
117
CYS
205
A
VAL
206
n
118
VAL
206
A
GLU
207
n
119
GLU
207
A
ALA
208
n
120
ALA
208
A
LEU
209
n
121
LEU
209
A
LEU
210
n
122
LEU
210
A
ALA
211
n
123
ALA
211
A
ARG
212
n
124
ARG
212
A
GLY
213
n
125
GLY
213
A
ALA
214
n
126
ALA
214
A
ASP
215
n
127
ASP
215
A
LEU
216
n
128
LEU
216
A
THR
217
n
129
THR
217
A
THR
218
n
130
THR
218
A
GLU
219
n
131
GLU
219
A
ALA
220
n
132
ALA
220
A
ASP
221
n
133
ASP
221
A
SER
222
n
134
SER
222
A
GLY
223
n
135
GLY
223
A
TYR
224
n
136
TYR
224
A
THR
225
n
137
THR
225
A
PRO
226
n
138
PRO
226
A
MET
227
n
139
MET
227
A
ASP
228
n
140
ASP
228
A
LEU
229
n
141
LEU
229
A
ALA
230
n
142
ALA
230
A
VAL
231
n
143
VAL
231
A
ALA
232
n
144
ALA
232
A
LEU
233
n
145
LEU
233
A
GLY
234
n
146
GLY
234
A
TYR
235
n
147
TYR
235
A
ARG
236
n
148
ARG
236
A
LYS
237
n
149
LYS
237
A
VAL
238
n
150
VAL
238
A
GLN
239
n
151
GLN
239
A
GLN
240
n
152
GLN
240
A
VAL
241
n
153
VAL
241
A
ILE
242
n
154
ILE
242
A
GLU
243
n
155
GLU
243
A
ASN
244
n
156
ASN
244
A
HIS
245
n
157
HIS
245
A
ILE
246
n
158
ILE
246
A
LEU
247
n
159
LEU
247
A
LYS
248
n
160
LYS
248
A
LEU
249
n
161
LEU
249
A
PHE
250
n
162
PHE
250
A
GLN
251
n
163
GLN
251
A
SER
252
n
164
SER
252
A
ASN
253
n
165
ASN
253
A
n
166
254
A
n
167
255
A
n
168
256
A
n
169
257
A
n
170
258
A
n
171
259
A
n
172
260
A
n
1
343
B
PRO
344
n
2
PRO
344
B
LEU
345
n
3
LEU
345
B
TYR
346
n
4
TYR
346
B
THR
347
n
5
THR
347
B
SER
348
n
6
SER
348
B
PRO
349
n
7
PRO
349
B
SER
350
n
8
SER
350
B
LEU
351
n
9
LEU
351
B
PRO
352
n
10
PRO
352
B
ASN
353
n
11
ASN
353
B
ILE
354
n
12
ILE
354
B
THR
355
n
13
THR
355
B
LEU
356
n
14
LEU
356
B
GLY
357
n
15
GLY
357
B
LEU
358
n
16
LEU
358
B
PRO
359
n
17
PRO
359
B
1.9053
-0.6245
1.2406
2.5806
-0.9986
3.5023
-0.0283
0.0353
-0.0269
-0.0032
0.0251
-0.0582
0.0613
0.1248
0.0032
0.0177
-0.0013
0.0255
0.0140
-0.0176
0.0570
refined
5.9683
36.9915
-1.4925
X-RAY DIFFRACTION
5.3716
0.2491
5.2044
2.8623
0.2763
12.2518
-0.2355
-0.7867
0.1929
0.1550
-0.0034
0.3321
-0.1792
-1.2282
0.2390
0.0897
0.0523
0.0534
0.1643
0.0024
0.1833
refined
-5.2007
39.8348
5.5870
X-RAY DIFFRACTION
A
91
A
253
X-RAY DIFFRACTION
1
A
2
A
6
X-RAY DIFFRACTION
1
A
9
A
88
X-RAY DIFFRACTION
1
A
261
A
312
X-RAY DIFFRACTION
1
B
344
B
359
X-RAY DIFFRACTION
2
B
37
B
176
X-RAY DIFFRACTION
2
software_defined_assembly
PISA
2
dimeric
software_defined_assembly
PISA
4
tetrameric
1680
-15
8950
4860
-40
16390
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
3_554
-x,y,-z-1/2
crystal symmetry operation
0.0000000000
0.0000000000
-49.6790000000
1
A
HOH
20
H
HOH
1
A
OG
SER
91
A
OG
SER
3
1
Y
1
A
CG1
ILE
94
A
CG1
ILE
6
1
Y
1
A
CD1
ILE
94
A
CD1
ILE
6
1
Y
1
A
CG
ARG
111
A
CG
ARG
23
1
Y
1
A
CD
ARG
111
A
CD
ARG
23
1
Y
1
A
NE
ARG
111
A
NE
ARG
23
1
Y
1
A
CZ
ARG
111
A
CZ
ARG
23
1
Y
1
A
NH1
ARG
111
A
NH1
ARG
23
1
Y
1
A
NH2
ARG
111
A
NH2
ARG
23
1
Y
1
A
CG
LYS
112
A
CG
LYS
24
1
Y
1
A
CD
LYS
112
A
CD
LYS
24
1
Y
1
A
CE
LYS
112
A
CE
LYS
24
1
Y
1
A
NZ
LYS
112
A
NZ
LYS
24
1
Y
1
A
CD
LYS
119
A
CD
LYS
31
1
Y
1
A
CE
LYS
119
A
CE
LYS
31
1
Y
1
A
NZ
LYS
119
A
NZ
LYS
31
1
Y
1
A
CD
GLU
122
A
CD
GLU
34
1
Y
1
A
OE1
GLU
122
A
OE1
GLU
34
1
Y
1
A
OE2
GLU
122
A
OE2
GLU
34
1
Y
1
A
CD
GLU
145
A
CD
GLU
57
1
Y
1
A
OE1
GLU
145
A
OE1
GLU
57
1
Y
1
A
OE2
GLU
145
A
OE2
GLU
57
1
Y
1
A
CD
ARG
236
A
CD
ARG
148
1
Y
1
A
NE
ARG
236
A
NE
ARG
148
1
Y
1
A
CZ
ARG
236
A
CZ
ARG
148
1
Y
1
A
NH1
ARG
236
A
NH1
ARG
148
1
Y
1
A
NH2
ARG
236
A
NH2
ARG
148
1
Y
1
A
CE
LYS
248
A
CE
LYS
160
1
Y
1
A
NZ
LYS
248
A
NZ
LYS
160
1
Y
1
A
GLY
89
A
GLY
1
1
Y
1
A
ASP
90
A
ASP
2
1
Y
1
A
LEU
254
A
LEU
166
1
Y
1
A
VAL
255
A
VAL
167
1
Y
1
A
PRO
256
A
PRO
168
1
Y
1
A
ALA
257
A
ALA
169
1
Y
1
A
ASP
258
A
ASP
170
1
Y
1
A
PRO
259
A
PRO
171
1
Y
1
A
GLU
260
A
GLU
172
1
Y
1
B
LEU
343
B
LEU
1
1
Y
1
A
A
CG
CD
GLU
GLU
138
138
0.090
0.015
1.515
1.605
N
1
A
A
CB
SG
CYS
CYS
205
205
-0.121
0.016
1.812
1.691
A
A
N
1
A
ARG
111
-26.69
-57.16
1
A
ASP
114
-98.36
-154.07
70.120
20.7861
5.310
0.6900
0.0000
0.0000
-0.8800
0.0000
0.1900
0.9460
0.9200
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : WITH TLS ADDED. Arp/warp, coot and the molprobity server were also used during refinement. Residues 110 through 116 of chain A are poorly defined by electron density.
0.2215
0.1866
0.1883
1.8500
39.8600
935
18636
5.0000
99.8600
0.2060
0.1720
1.000
0.500
5.7180
0.0780
RANDOM
1
THROUGHOUT
0.000
MOLECULAR REPLACEMENT
0.1210
0.8000
0.8000
1.4000
pdb entry 3SO8
MAXIMUM LIKELIHOOD
MASK
1.8500
39.8600
117
1482
5
0
1360
0.017
0.022
1409
0.001
0.020
908
1.476
1.970
1927
1.013
3.000
2234
5.493
5.000
183
35.704
24.918
61
11.902
15.000
221
15.545
15.000
6
0.102
0.200
224
0.007
0.021
1588
0.001
0.020
267
0.810
1.500
897
0.256
1.500
368
1.401
2.000
1438
2.278
3.000
512
3.632
4.500
486
0.461
0.376
1.898
64
1294
1359
20
99.926
0.325
0.277
1.950
74
1249
1324
20
99.924
0.271
0.194
2.006
67
1214
1282
20
99.922
0.237
0.179
2.068
73
1176
1249
20
100.000
0.184
0.160
2.136
62
1145
1207
20
100.000
0.230
0.166
2.210
57
1122
1180
20
99.915
0.192
0.180
2.293
53
1085
1139
20
99.912
0.193
0.173
2.387
49
1037
1086
20
100.000
0.193
0.180
2.492
48
1010
1059
20
99.906
0.274
0.167
2.614
52
945
997
20
100.000
0.219
0.173
2.754
59
915
976
20
99.795
0.188
0.189
2.921
37
876
913
20
100.000
0.212
0.181
3.121
49
811
861
20
99.884
0.239
0.194
3.369
37
772
811
20
99.753
0.220
0.180
3.688
42
692
734
20
100.000
0.170
0.158
4.119
35
648
685
20
99.708
0.189
0.147
4.748
21
577
599
20
99.833
0.187
0.184
5.795
32
488
522
20
99.617
0.191
0.226
8.109
15
400
419
20
99.045
0.273
0.223
39.858
9
245
261
20
97.318
1.85
49.18
3UXG
18676
18636
0.120
1
15.0071
7.11
99.96
0.88
1.85
1.95
19184
2689
1
7.13
99.97
0.54
1.95
2.07
18331
2541
1
7.21
100.00
0.33
2.07
2.21
17320
2394
1
7.23
100.00
0.24
2.21
2.39
15998
2224
1
7.19
100.00
0.16
2.39
2.62
14868
2067
1
7.19
100.00
0.11
2.62
2.93
13530
1889
1
7.16
100.00
0.06
2.93
3.38
11839
1672
1
7.08
100.00
0.05
3.38
4.14
9807
1424
1
6.89
99.94
0.04
4.14
5.85
7830
1121
1
6.98
99.98
0.05
5.85
49.18
4124
655
1
6.30
99.08
data scaling
Phil R. Evans
pre@mrc-lmb.cam.ac.uk
2010/01/06
Fortran_77
http://www.ccp4.ac.uk/dist/html/scala.html
SCALA
other
CCP4_3.3.16
phasing
Randy J. Read
cimr-phaser@lists.cam.ac.uk
http://www-structmed.cimr.cam.ac.uk/phaser/
PHASER
program
refinement
Garib N. Murshudov
garib@ysbl.york.ac.uk
24/04/2001
Fortran_77
http://www.ccp4.ac.uk/dist/html/refmac5.html
REFMAC
program
refmac_5.5.0109
data extraction
PDB
deposit@deposit.rcsb.org
August 3, 2011
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.11
data reduction
XDS
Crystal structure of RFXANK
1
N
N
2
N
N
3
N
N
3
N
N
3
N
N
3
N
N
3
N
N
4
N
N
4
N
N
A
SER
93
A
SER
5
HELX_P
A
GLN
100
A
GLN
12
1
1
8
A
GLU
102
A
GLU
14
HELX_P
A
LEU
110
A
LEU
22
1
2
9
A
ASP
114
A
ASP
26
HELX_P
A
LYS
119
A
LYS
31
5
3
6
A
THR
126
A
THR
38
HELX_P
A
PHE
134
A
PHE
46
1
4
9
A
GLU
136
A
GLU
48
HELX_P
A
GLY
147
A
GLY
59
1
5
12
A
SER
159
A
SER
71
HELX_P
A
GLY
167
A
GLY
79
1
6
9
A
TYR
169
A
TYR
81
HELX_P
A
GLU
178
A
GLU
90
1
7
10
A
THR
192
A
THR
104
HELX_P
A
GLY
200
A
GLY
112
1
8
9
A
HIS
202
A
HIS
114
HELX_P
A
ARG
212
A
ARG
124
1
9
11
A
THR
225
A
THR
137
HELX_P
A
GLY
234
A
GLY
146
1
10
10
A
TYR
235
A
TYR
147
HELX_P
A
LEU
249
A
LEU
161
1
11
15
TRANSCRIPTION
histone, ankyrin repeat, structural genomics consortium, SGC, TRANSCRIPTION
RFXK_HUMAN
UNP
1
90
O14593
DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGY
TDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKL
FQSNLVPADPE
HDAC4_HUMAN
UNP
2
343
P56524
LPLYTSPSLPNITLGLP
90
260
3UXG
90
260
O14593
A
1
2
172
343
359
3UXG
343
359
P56524
B
2
1
17
1
expression tag
GLY
89
3UXG
A
O14593
UNP
1
1
ARG
engineered mutation
HIS
199
3UXG
A
O14593
UNP
199
111
20
C 2 2 21