0.009968
0.000000
0.002126
0.000000
0.017666
0.000000
0.000000
0.000000
0.010978
0.00000
0.00000
0.00000
Gridley, C.L.
Jaeger, J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
102.04
90.00
100.321
56.607
93.144
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C10 H17 N2 O13 P3
466.169
n
2',3'-DIDEOXY-THYMIDINE-5'-TRIPHOSPHATE
DNA OH 3 prime terminus
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Na 1
22.990
SODIUM ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
R
P
N
89
N
O
N
90
N
O
N
91
N
O
N
92
N
C
N
93
S
C
N
94
N
O
N
95
R
C
N
96
N
N
N
97
N
C
N
98
N
C
N
99
N
O
N
100
N
N
N
101
N
C
N
102
N
O
N
103
N
C
N
104
N
C
N
105
N
C
N
106
N
C
N
107
N
O
N
108
R
P
N
109
N
O
N
110
N
O
N
111
N
O
N
112
N
P
N
113
N
O
N
114
N
O
N
115
N
O
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
O
N
134
N
P
N
135
N
O
N
136
N
O
N
137
N
O
N
138
N
C
N
139
R
C
N
140
N
O
N
141
S
C
N
142
N
O
N
143
N
C
N
144
R
C
Y
145
N
N
Y
146
N
C
Y
147
N
N
Y
148
N
C
Y
149
N
C
N
150
N
N
Y
151
N
N
Y
152
N
C
Y
153
N
N
Y
154
N
C
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
O
N
170
N
P
N
171
N
O
N
172
N
O
N
173
N
O
N
174
N
C
N
175
R
C
N
176
N
O
N
177
S
C
N
178
N
O
N
179
N
C
N
180
R
C
N
181
N
N
N
182
N
C
N
183
N
O
N
184
N
N
N
185
N
C
N
186
N
N
N
187
N
C
N
188
N
C
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
O
N
204
N
P
N
205
N
O
N
206
N
O
N
207
N
O
N
208
N
C
N
209
R
C
N
210
N
O
N
211
S
C
N
212
N
O
N
213
N
C
N
214
R
C
Y
215
N
N
Y
216
N
C
Y
217
N
N
Y
218
N
C
N
219
N
C
N
220
N
O
N
221
N
N
N
222
N
C
N
223
N
N
N
224
N
N
Y
225
N
C
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
O
N
241
N
P
N
242
N
O
N
243
N
O
N
244
N
O
N
245
N
C
N
246
R
C
N
247
N
O
N
248
S
C
N
249
N
O
N
250
N
C
N
251
R
C
N
252
N
N
N
253
N
C
N
254
N
O
N
255
N
N
N
256
N
C
N
257
N
O
N
258
N
C
N
259
N
C
N
260
N
C
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
N
N
277
S
C
N
278
N
C
N
279
N
O
N
280
N
C
N
281
N
C
N
282
N
C
N
283
N
O
N
284
N
N
N
285
N
O
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
N
N
297
S
C
N
298
N
C
N
299
N
O
N
300
N
C
N
301
N
C
N
302
N
C
N
303
N
O
N
304
N
O
N
305
N
O
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
N
N
316
N
C
N
317
N
C
N
318
N
O
N
319
N
O
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
N
N
326
S
C
N
327
N
C
N
328
N
O
N
329
N
C
Y
330
N
C
Y
331
N
N
Y
332
N
C
Y
333
N
C
Y
334
N
N
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
O
N
347
N
H
N
348
N
H
N
349
N
N
N
350
S
C
N
351
N
C
N
352
N
O
N
353
S
C
N
354
N
C
N
355
N
C
N
356
N
C
N
357
N
O
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
N
N
372
S
C
N
373
N
C
N
374
N
O
N
375
N
C
N
376
N
C
N
377
N
C
N
378
N
C
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
N
N
394
S
C
N
395
N
C
N
396
N
O
N
397
N
C
N
398
N
C
N
399
N
C
N
400
N
C
N
401
N
N
N
402
N
O
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
N
N
419
S
C
N
420
N
C
N
421
N
O
N
422
N
C
N
423
N
C
N
424
N
S
N
425
N
C
N
426
N
O
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
NA
N
439
N
N
N
440
S
C
N
441
N
C
N
442
N
O
N
443
N
C
Y
444
N
C
Y
445
N
C
Y
446
N
C
Y
447
N
C
Y
448
N
C
Y
449
N
C
N
450
N
O
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
N
N
463
S
C
N
464
N
C
N
465
N
O
N
466
N
C
N
467
N
C
N
468
N
C
N
469
N
O
N
470
N
H
N
471
N
H
N
472
N
H
N
473
N
H
N
474
N
H
N
475
N
H
N
476
N
H
N
477
N
H
N
478
N
H
N
479
N
N
N
480
S
C
N
481
N
C
N
482
N
O
N
483
N
C
N
484
N
O
N
485
N
O
N
486
N
H
N
487
N
H
N
488
N
H
N
489
N
H
N
490
N
H
N
491
N
H
N
492
N
H
N
493
N
N
N
494
S
C
N
495
N
C
N
496
N
O
N
497
R
C
N
498
N
O
N
499
N
C
N
500
N
O
N
501
N
H
N
502
N
H
N
503
N
H
N
504
N
H
N
505
N
H
N
506
N
H
N
507
N
H
N
508
N
H
N
509
N
H
N
510
N
N
N
511
S
C
N
512
N
C
N
513
N
O
N
514
N
C
Y
515
N
C
Y
516
N
C
Y
517
N
C
Y
518
N
N
Y
519
N
C
Y
520
N
C
Y
521
N
C
Y
522
N
C
Y
523
N
C
N
524
N
O
N
525
N
H
N
526
N
H
N
527
N
H
N
528
N
H
N
529
N
H
N
530
N
H
N
531
N
H
N
532
N
H
N
533
N
H
N
534
N
H
N
535
N
H
N
536
N
H
N
537
N
N
N
538
S
C
N
539
N
C
N
540
N
O
N
541
N
C
Y
542
N
C
Y
543
N
C
Y
544
N
C
Y
545
N
C
Y
546
N
C
Y
547
N
C
N
548
N
O
N
549
N
O
N
550
N
H
N
551
N
H
N
552
N
H
N
553
N
H
N
554
N
H
N
555
N
H
N
556
N
H
N
557
N
H
N
558
N
H
N
559
N
H
N
560
N
H
N
561
N
N
N
562
S
C
N
563
N
C
N
564
N
O
N
565
N
C
N
566
N
C
N
567
N
C
N
568
N
O
N
569
N
H
N
570
N
H
N
571
N
H
N
572
N
H
N
573
N
H
N
574
N
H
N
575
N
H
N
576
N
H
N
577
N
H
N
578
N
H
N
579
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
doub
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
doub
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
doub
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
doub
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
doub
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
doub
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
Y
152
N
sing
Y
153
N
sing
Y
154
N
doub
N
155
N
sing
Y
156
N
sing
Y
157
N
sing
Y
158
N
doub
N
159
N
sing
Y
160
N
doub
N
161
N
sing
N
162
N
sing
Y
163
N
sing
Y
164
N
doub
N
165
N
sing
Y
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
doub
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
doub
N
193
N
sing
N
194
N
doub
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
doub
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
doub
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
Y
225
N
sing
Y
226
N
sing
Y
227
N
doub
N
228
N
sing
Y
229
N
sing
N
230
N
sing
Y
231
N
doub
N
232
N
doub
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
doub
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
doub
N
271
N
sing
N
272
N
sing
N
273
N
doub
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
doub
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
doub
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
doub
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
doub
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
doub
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
doub
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
Y
335
N
sing
Y
336
N
doub
Y
337
N
doub
N
338
N
sing
Y
339
N
sing
N
340
N
sing
Y
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
doub
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
doub
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
doub
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
doub
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
doub
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
Y
443
N
doub
Y
444
N
sing
Y
445
N
sing
N
446
N
sing
Y
447
N
doub
N
448
N
sing
Y
449
N
doub
N
450
N
sing
Y
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
doub
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
N
466
N
sing
N
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
sing
N
471
N
sing
N
472
N
sing
N
473
N
sing
N
474
N
sing
N
475
N
sing
N
476
N
sing
N
477
N
sing
N
478
N
doub
N
479
N
sing
N
480
N
sing
N
481
N
sing
N
482
N
sing
N
483
N
sing
N
484
N
sing
N
485
N
sing
N
486
N
sing
N
487
N
sing
N
488
N
sing
N
489
N
sing
N
490
N
sing
N
491
N
doub
N
492
N
sing
N
493
N
sing
N
494
N
sing
N
495
N
sing
N
496
N
sing
N
497
N
sing
N
498
N
sing
N
499
N
sing
N
500
N
sing
N
501
N
sing
N
502
N
sing
N
503
N
sing
N
504
N
sing
N
505
N
sing
N
506
N
sing
N
507
N
doub
N
508
N
sing
N
509
N
sing
N
510
N
sing
N
511
N
sing
Y
512
N
doub
Y
513
N
sing
Y
514
N
sing
N
515
N
sing
Y
516
N
doub
Y
517
N
sing
Y
518
N
sing
N
519
N
sing
Y
520
N
sing
Y
521
N
doub
N
522
N
sing
Y
523
N
doub
N
524
N
sing
Y
525
N
sing
N
526
N
sing
N
527
N
sing
N
528
N
sing
N
529
N
sing
N
530
N
sing
N
531
N
sing
N
532
N
sing
N
533
N
sing
N
534
N
sing
N
535
N
doub
N
536
N
sing
N
537
N
sing
N
538
N
sing
N
539
N
sing
Y
540
N
doub
Y
541
N
sing
Y
542
N
sing
N
543
N
sing
Y
544
N
doub
N
545
N
sing
Y
546
N
doub
N
547
N
sing
Y
548
N
sing
N
549
N
sing
N
550
N
sing
N
551
N
sing
N
552
N
sing
N
553
N
sing
N
554
N
sing
N
555
N
sing
N
556
N
sing
N
557
N
sing
N
558
N
sing
N
559
N
doub
N
560
N
sing
N
561
N
sing
N
562
N
sing
N
563
N
sing
N
564
N
sing
N
565
N
sing
N
566
N
sing
N
567
N
sing
N
568
N
sing
N
569
N
sing
N
570
N
sing
US
Biochemistry
BICHAW
0033
0006-2960
52
4422
4432
10.1021/bi301368f
23651085
Structural Changes in the Hydrophobic Hinge Region Adversely Affect the Activity and Fidelity of the I260Q Mutator DNA Polymerase beta.
2013
10.2210/pdb3uxp/pdb
pdb_00003uxp
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2011-09-14
ADSC QUANTUM 315
Monochromator: Double silicon(111) crystal monochromator with cryogenically-cooled first crystal and sagittally-bent second crystal horizontally-focusing at 3.3:1 demagnification. Mirror: Meridionally-bent fused silica mirror with palladium and uncoated stripes vertically-focusing at 6.6:1 demagnification.
SINGLE WAVELENGTH
M
x-ray
1
1.1
1.0
X25
NSLS
1.1
SYNCHROTRON
NSLS BEAMLINE X25
38403.734
DNA polymerase beta
2.7.7.7, 4.2.99.-
I260Q
2
man
polymer
Primer DNA Strand
2177.459
DNA 5'-D(P*AP*TP*GP*TP*GP*AP*G)-3'
2
syn
polymer
Template DNA Strand
2683.801
DNA 5'-D(P*AP*CP*TP*CP*AP*CP*AP*TP*A)-3'
2
syn
polymer
466.169
2',3'-DIDEOXY-THYMIDINE-5'-TRIPHOSPHATE
2
syn
non-polymer
22.990
SODIUM ION
7
syn
non-polymer
18.015
water
41
nat
water
no
no
MSKRKAPQETLNGGITDMLVELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG
KLRKLEKIRQDDTSSSINFLTRVTGIGPSAARKLVDEGIKTLEDLRKNEDKLNHHQRIGLKYFEDFEKRIPREEMLQMQD
IVLNEVKKLDPEYIATVCGSFRRGAESSGDMDVLLTHPNFTSESSKQPKLLHRVVEQLQKVRFITDTLSKGETKFMGVCQ
LPSENDENEYPHRRIDIRLQPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEQDIF
DYIQWRYREPKDRSE
MSKRKAPQETLNGGITDMLVELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG
KLRKLEKIRQDDTSSSINFLTRVTGIGPSAARKLVDEGIKTLEDLRKNEDKLNHHQRIGLKYFEDFEKRIPREEMLQMQD
IVLNEVKKLDPEYIATVCGSFRRGAESSGDMDVLLTHPNFTSESSKQPKLLHRVVEQLQKVRFITDTLSKGETKFMGVCQ
LPSENDENEYPHRRIDIRLQPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEQDIF
DYIQWRYREPKDRSE
A,B
polypeptide(L)
no
no
(DA)(DT)(DG)(DT)(DG)(DA)(DG)
ATGTGAG
P,D
polydeoxyribonucleotide
no
no
(DA)(DC)(DT)(DC)(DA)(DC)(DA)(DT)(DA)
ACTCACATA
T,E
polydeoxyribonucleotide
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
rat
sample
Polb
10116
Rattus norvegicus
562
Escherichia coli
1
2.99
58.85
VAPOR DIFFUSION, SITTING DROP
6.5
Peg3350, NaCl, Glycerol, Cacodylate, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 296K
296
2.317
1
20
P
2
T
9
12.868
P_DT2:DA9_T
1
-11.116
-0.395
-0.045
-0.158
0.851
1
19
P
3
T
8
7.357
P_DG3:DC8_T
2
-17.404
1.650
0.392
-0.149
10.953
1
20
P
4
T
7
-6.311
P_DT4:DA7_T
3
-11.003
-1.295
-0.162
-0.371
-5.758
1
19
P
5
T
6
-1.633
P_DG5:DC6_T
4
-4.735
-0.942
0.456
-0.068
6.113
1
20
P
6
T
5
-0.842
P_DA6:DT5_T
5
-7.782
0.130
0.212
-0.430
2.939
1
P
7
T
4
37.224
P_DG7:DC4_T
6
-9.603
1.134
-0.041
0.803
-9.063
1
20
D
2
E
9
2.297
D_DT2:DA9_E
7
-10.432
-0.870
0.556
-0.414
-5.614
1
19
D
3
E
8
-8.863
D_DG3:DC8_E
8
-16.152
0.367
-0.163
-0.154
-9.705
1
20
D
4
E
7
0.526
D_DT4:DA7_E
9
-19.577
-1.390
-0.091
-0.251
-12.251
1
19
D
5
E
6
6.305
D_DG5:DC6_E
10
-6.854
-0.201
-0.175
0.145
-11.069
1
20
D
6
E
5
-6.609
D_DA6:DT5_E
11
-16.487
0.614
-0.769
-0.182
1.798
1
D
7
E
4
17.807
D_DG7:DC4_E
12
-9.804
1.088
-0.281
0.318
3.510
43.703
P
P
2
3
2.722
T
T
9
8
3.447
2.025
-0.590
0.917
PP_DT2DG3:DC8DA9_TT
1
-2.363
3.177
43.597
1.026
0.552
2.667
17.787
P
P
3
4
4.573
T
T
8
7
2.941
1.398
-0.233
-1.478
PP_DG3DT4:DA7DC8_TT
2
4.442
-14.533
17.171
-5.499
3.041
3.316
35.805
P
P
4
5
18.761
T
T
7
6
3.683
11.332
0.965
-0.286
PP_DT4DG5:DC6DA7_TT
3
-3.266
5.407
33.867
-2.261
-2.087
3.231
37.389
P
P
5
6
-2.633
T
T
6
5
3.186
-1.686
0.478
-0.599
PP_DG5DA6:DT5DC6_TT
4
2.175
-3.396
37.291
-0.717
-0.465
3.707
35.900
P
P
6
7
-0.088
T
T
5
4
3.493
-0.054
2.007
-0.454
PP_DA6DG7:DC4DT5_TT
5
4.394
-7.146
35.639
-0.727
-2.563
3.230
36.450
D
D
2
3
10.667
E
E
9
8
3.347
6.626
-0.787
0.179
DD_DT2DG3:DC8DA9_EE
6
3.788
-6.097
35.668
-0.649
1.792
1.943
21.016
D
D
3
4
26.509
E
E
8
7
3.311
9.338
0.707
-2.321
DD_DG3DT4:DA7DC8_EE
7
-0.222
0.631
18.847
-9.705
-2.018
3.502
38.335
D
D
4
5
5.879
E
E
7
6
3.538
3.852
0.972
0.443
DD_DT4DG5:DC6DA7_EE
8
-2.302
3.514
38.081
0.154
-1.791
3.410
37.942
D
D
5
6
6.183
E
E
6
5
3.514
4.010
0.088
-0.818
DD_DG5DA6:DT5DC6_EE
9
2.634
-4.061
37.648
-1.802
0.222
2.986
37.353
D
D
6
7
11.332
E
E
5
4
3.036
7.209
0.595
0.279
DD_DA6DG7:DC4DT5_EE
10
-2.717
4.271
36.577
-0.450
-1.262
chem_comp_atom
chem_comp_bond
database_2
pdbx_struct_conn_angle
struct_conn
struct_ref_seq_dif
struct_site
repository
Initial release
Database references
Data collection
Database references
Derived calculations
1
0
2012-12-05
1
1
2013-08-28
1
2
2024-02-28
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_asym_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2011-12-05
REL
REL
D3T
2',3'-DIDEOXY-THYMIDINE-5'-TRIPHOSPHATE
NA
SODIUM ION
HOH
water
Primer DNA Strand
sample
Template DNA Strand
sample
D3T
1
4
D3T
D3T
336
A
NA
1
5
NA
NA
337
A
NA
2
5
NA
NA
338
A
NA
3
5
NA
NA
339
A
NA
6
5
NA
NA
340
A
D3T
1
4
D3T
D3T
336
B
NA
4
5
NA
NA
337
B
NA
5
5
NA
NA
338
B
NA
7
5
NA
NA
339
B
HOH
2
6
HOH
HOH
341
A
HOH
7
6
HOH
HOH
342
A
HOH
10
6
HOH
HOH
343
A
HOH
20
6
HOH
HOH
344
A
HOH
21
6
HOH
HOH
345
A
HOH
23
6
HOH
HOH
346
A
HOH
24
6
HOH
HOH
347
A
HOH
28
6
HOH
HOH
348
A
HOH
29
6
HOH
HOH
349
A
HOH
37
6
HOH
HOH
350
A
HOH
39
6
HOH
HOH
351
A
HOH
43
6
HOH
HOH
352
A
HOH
44
6
HOH
HOH
353
A
HOH
1
6
HOH
HOH
340
B
HOH
5
6
HOH
HOH
341
B
HOH
6
6
HOH
HOH
342
B
HOH
9
6
HOH
HOH
343
B
HOH
11
6
HOH
HOH
344
B
HOH
15
6
HOH
HOH
345
B
HOH
22
6
HOH
HOH
346
B
HOH
25
6
HOH
HOH
347
B
HOH
26
6
HOH
HOH
348
B
HOH
30
6
HOH
HOH
349
B
HOH
31
6
HOH
HOH
350
B
HOH
33
6
HOH
HOH
351
B
HOH
35
6
HOH
HOH
352
B
HOH
40
6
HOH
HOH
353
B
HOH
41
6
HOH
HOH
354
B
HOH
45
6
HOH
HOH
355
B
HOH
47
6
HOH
HOH
356
B
HOH
14
6
HOH
HOH
14
P
HOH
34
6
HOH
HOH
34
P
HOH
12
6
HOH
HOH
12
T
HOH
18
6
HOH
HOH
18
T
HOH
36
6
HOH
HOH
36
T
HOH
46
6
HOH
HOH
46
T
HOH
19
6
HOH
HOH
19
D
HOH
3
6
HOH
HOH
12
E
HOH
4
6
HOH
HOH
13
E
HOH
17
6
HOH
HOH
17
E
HOH
38
6
HOH
HOH
38
E
n
1
1
A
n
2
2
A
n
3
3
A
n
4
4
A
n
5
5
A
n
6
6
A
n
7
7
A
n
8
8
A
GLU
9
n
9
GLU
9
A
THR
10
n
10
THR
10
A
LEU
11
n
11
LEU
11
A
ASN
12
n
12
ASN
12
A
GLY
13
n
13
GLY
13
A
GLY
14
n
14
GLY
14
A
ILE
15
n
15
ILE
15
A
THR
16
n
16
THR
16
A
ASP
17
n
17
ASP
17
A
MET
18
n
18
MET
18
A
LEU
19
n
19
LEU
19
A
VAL
20
n
20
VAL
20
A
GLU
21
n
21
GLU
21
A
LEU
22
n
22
LEU
22
A
ALA
23
n
23
ALA
23
A
ASN
24
n
24
ASN
24
A
PHE
25
n
25
PHE
25
A
GLU
26
n
26
GLU
26
A
LYS
27
n
27
LYS
27
A
ASN
28
n
28
ASN
28
A
VAL
29
n
29
VAL
29
A
SER
30
n
30
SER
30
A
GLN
31
n
31
GLN
31
A
ALA
32
n
32
ALA
32
A
ILE
33
n
33
ILE
33
A
HIS
34
n
34
HIS
34
A
LYS
35
n
35
LYS
35
A
TYR
36
n
36
TYR
36
A
ASN
37
n
37
ASN
37
A
ALA
38
n
38
ALA
38
A
TYR
39
n
39
TYR
39
A
ARG
40
n
40
ARG
40
A
LYS
41
n
41
LYS
41
A
ALA
42
n
42
ALA
42
A
ALA
43
n
43
ALA
43
A
SER
44
n
44
SER
44
A
VAL
45
n
45
VAL
45
A
ILE
46
n
46
ILE
46
A
ALA
47
n
47
ALA
47
A
LYS
48
n
48
LYS
48
A
TYR
49
n
49
TYR
49
A
PRO
50
n
50
PRO
50
A
HIS
51
n
51
HIS
51
A
LYS
52
n
52
LYS
52
A
ILE
53
n
53
ILE
53
A
LYS
54
n
54
LYS
54
A
SER
55
n
55
SER
55
A
GLY
56
n
56
GLY
56
A
ALA
57
n
57
ALA
57
A
GLU
58
n
58
GLU
58
A
ALA
59
n
59
ALA
59
A
LYS
60
n
60
LYS
60
A
LYS
61
n
61
LYS
61
A
LEU
62
n
62
LEU
62
A
PRO
63
n
63
PRO
63
A
GLY
64
n
64
GLY
64
A
VAL
65
n
65
VAL
65
A
GLY
66
n
66
GLY
66
A
THR
67
n
67
THR
67
A
LYS
68
n
68
LYS
68
A
ILE
69
n
69
ILE
69
A
ALA
70
n
70
ALA
70
A
GLU
71
n
71
GLU
71
A
LYS
72
n
72
LYS
72
A
ILE
73
n
73
ILE
73
A
ASP
74
n
74
ASP
74
A
GLU
75
n
75
GLU
75
A
PHE
76
n
76
PHE
76
A
LEU
77
n
77
LEU
77
A
ALA
78
n
78
ALA
78
A
THR
79
n
79
THR
79
A
GLY
80
n
80
GLY
80
A
LYS
81
n
81
LYS
81
A
LEU
82
n
82
LEU
82
A
ARG
83
n
83
ARG
83
A
LYS
84
n
84
LYS
84
A
LEU
85
n
85
LEU
85
A
GLU
86
n
86
GLU
86
A
LYS
87
n
87
LYS
87
A
ILE
88
n
88
ILE
88
A
ARG
89
n
89
ARG
89
A
GLN
90
n
90
GLN
90
A
ASP
91
n
91
ASP
91
A
ASP
92
n
92
ASP
92
A
THR
93
n
93
THR
93
A
SER
94
n
94
SER
94
A
SER
95
n
95
SER
95
A
SER
96
n
96
SER
96
A
ILE
97
n
97
ILE
97
A
ASN
98
n
98
ASN
98
A
PHE
99
n
99
PHE
99
A
LEU
100
n
100
LEU
100
A
THR
101
n
101
THR
101
A
ARG
102
n
102
ARG
102
A
VAL
103
n
103
VAL
103
A
THR
104
n
104
THR
104
A
GLY
105
n
105
GLY
105
A
ILE
106
n
106
ILE
106
A
GLY
107
n
107
GLY
107
A
PRO
108
n
108
PRO
108
A
SER
109
n
109
SER
109
A
ALA
110
n
110
ALA
110
A
ALA
111
n
111
ALA
111
A
ARG
112
n
112
ARG
112
A
LYS
113
n
113
LYS
113
A
LEU
114
n
114
LEU
114
A
VAL
115
n
115
VAL
115
A
ASP
116
n
116
ASP
116
A
GLU
117
n
117
GLU
117
A
GLY
118
n
118
GLY
118
A
ILE
119
n
119
ILE
119
A
LYS
120
n
120
LYS
120
A
THR
121
n
121
THR
121
A
LEU
122
n
122
LEU
122
A
GLU
123
n
123
GLU
123
A
ASP
124
n
124
ASP
124
A
LEU
125
n
125
LEU
125
A
ARG
126
n
126
ARG
126
A
LYS
127
n
127
LYS
127
A
ASN
128
n
128
ASN
128
A
GLU
129
n
129
GLU
129
A
ASP
130
n
130
ASP
130
A
LYS
131
n
131
LYS
131
A
LEU
132
n
132
LEU
132
A
ASN
133
n
133
ASN
133
A
HIS
134
n
134
HIS
134
A
HIS
135
n
135
HIS
135
A
GLN
136
n
136
GLN
136
A
ARG
137
n
137
ARG
137
A
ILE
138
n
138
ILE
138
A
GLY
139
n
139
GLY
139
A
LEU
140
n
140
LEU
140
A
LYS
141
n
141
LYS
141
A
TYR
142
n
142
TYR
142
A
PHE
143
n
143
PHE
143
A
GLU
144
n
144
GLU
144
A
ASP
145
n
145
ASP
145
A
PHE
146
n
146
PHE
146
A
GLU
147
n
147
GLU
147
A
LYS
148
n
148
LYS
148
A
ARG
149
n
149
ARG
149
A
ILE
150
n
150
ILE
150
A
PRO
151
n
151
PRO
151
A
ARG
152
n
152
ARG
152
A
GLU
153
n
153
GLU
153
A
GLU
154
n
154
GLU
154
A
MET
155
n
155
MET
155
A
LEU
156
n
156
LEU
156
A
GLN
157
n
157
GLN
157
A
MET
158
n
158
MET
158
A
GLN
159
n
159
GLN
159
A
ASP
160
n
160
ASP
160
A
ILE
161
n
161
ILE
161
A
VAL
162
n
162
VAL
162
A
LEU
163
n
163
LEU
163
A
ASN
164
n
164
ASN
164
A
GLU
165
n
165
GLU
165
A
VAL
166
n
166
VAL
166
A
LYS
167
n
167
LYS
167
A
LYS
168
n
168
LYS
168
A
LEU
169
n
169
LEU
169
A
ASP
170
n
170
ASP
170
A
PRO
171
n
171
PRO
171
A
GLU
172
n
172
GLU
172
A
TYR
173
n
173
TYR
173
A
ILE
174
n
174
ILE
174
A
ALA
175
n
175
ALA
175
A
THR
176
n
176
THR
176
A
VAL
177
n
177
VAL
177
A
CYS
178
n
178
CYS
178
A
GLY
179
n
179
GLY
179
A
SER
180
n
180
SER
180
A
PHE
181
n
181
PHE
181
A
ARG
182
n
182
ARG
182
A
ARG
183
n
183
ARG
183
A
GLY
184
n
184
GLY
184
A
ALA
185
n
185
ALA
185
A
GLU
186
n
186
GLU
186
A
SER
187
n
187
SER
187
A
SER
188
n
188
SER
188
A
GLY
189
n
189
GLY
189
A
ASP
190
n
190
ASP
190
A
MET
191
n
191
MET
191
A
ASP
192
n
192
ASP
192
A
VAL
193
n
193
VAL
193
A
LEU
194
n
194
LEU
194
A
LEU
195
n
195
LEU
195
A
THR
196
n
196
THR
196
A
HIS
197
n
197
HIS
197
A
PRO
198
n
198
PRO
198
A
ASN
199
n
199
ASN
199
A
PHE
200
n
200
PHE
200
A
THR
201
n
201
THR
201
A
SER
202
n
202
SER
202
A
GLU
203
n
203
GLU
203
A
SER
204
n
204
SER
204
A
SER
205
n
205
SER
205
A
LYS
206
n
206
LYS
206
A
GLN
207
n
207
GLN
207
A
PRO
208
n
208
PRO
208
A
LYS
209
n
209
LYS
209
A
LEU
210
n
210
LEU
210
A
LEU
211
n
211
LEU
211
A
HIS
212
n
212
HIS
212
A
ARG
213
n
213
ARG
213
A
VAL
214
n
214
VAL
214
A
VAL
215
n
215
VAL
215
A
GLU
216
n
216
GLU
216
A
GLN
217
n
217
GLN
217
A
LEU
218
n
218
LEU
218
A
GLN
219
n
219
GLN
219
A
LYS
220
n
220
LYS
220
A
VAL
221
n
221
VAL
221
A
ARG
222
n
222
ARG
222
A
PHE
223
n
223
PHE
223
A
ILE
224
n
224
ILE
224
A
THR
225
n
225
THR
225
A
ASP
226
n
226
ASP
226
A
THR
227
n
227
THR
227
A
LEU
228
n
228
LEU
228
A
SER
229
n
229
SER
229
A
LYS
230
n
230
LYS
230
A
GLY
231
n
231
GLY
231
A
GLU
232
n
232
GLU
232
A
THR
233
n
233
THR
233
A
LYS
234
n
234
LYS
234
A
PHE
235
n
235
PHE
235
A
MET
236
n
236
MET
236
A
GLY
237
n
237
GLY
237
A
VAL
238
n
238
VAL
238
A
CYS
239
n
239
CYS
239
A
GLN
240
n
240
GLN
240
A
LEU
241
n
241
LEU
241
A
PRO
242
n
242
PRO
242
A
SER
243
n
243
SER
243
A
GLU
244
n
244
GLU
244
A
ASN
245
n
245
ASN
245
A
ASP
246
n
246
ASP
246
A
GLU
247
n
247
GLU
247
A
ASN
248
n
248
ASN
248
A
GLU
249
n
249
GLU
249
A
TYR
250
n
250
TYR
250
A
PRO
251
n
251
PRO
251
A
HIS
252
n
252
HIS
252
A
ARG
253
n
253
ARG
253
A
ARG
254
n
254
ARG
254
A
ILE
255
n
255
ILE
255
A
ASP
256
n
256
ASP
256
A
ILE
257
n
257
ILE
257
A
ARG
258
n
258
ARG
258
A
LEU
259
n
259
LEU
259
A
GLN
260
n
260
GLN
260
A
PRO
261
n
261
PRO
261
A
LYS
262
n
262
LYS
262
A
ASP
263
n
263
ASP
263
A
GLN
264
n
264
GLN
264
A
TYR
265
n
265
TYR
265
A
TYR
266
n
266
TYR
266
A
CYS
267
n
267
CYS
267
A
GLY
268
n
268
GLY
268
A
VAL
269
n
269
VAL
269
A
LEU
270
n
270
LEU
270
A
TYR
271
n
271
TYR
271
A
PHE
272
n
272
PHE
272
A
THR
273
n
273
THR
273
A
GLY
274
n
274
GLY
274
A
SER
275
n
275
SER
275
A
ASP
276
n
276
ASP
276
A
ILE
277
n
277
ILE
277
A
PHE
278
n
278
PHE
278
A
ASN
279
n
279
ASN
279
A
LYS
280
n
280
LYS
280
A
ASN
281
n
281
ASN
281
A
MET
282
n
282
MET
282
A
ARG
283
n
283
ARG
283
A
ALA
284
n
284
ALA
284
A
HIS
285
n
285
HIS
285
A
ALA
286
n
286
ALA
286
A
LEU
287
n
287
LEU
287
A
GLU
288
n
288
GLU
288
A
LYS
289
n
289
LYS
289
A
GLY
290
n
290
GLY
290
A
PHE
291
n
291
PHE
291
A
THR
292
n
292
THR
292
A
ILE
293
n
293
ILE
293
A
ASN
294
n
294
ASN
294
A
GLU
295
n
295
GLU
295
A
TYR
296
n
296
TYR
296
A
THR
297
n
297
THR
297
A
ILE
298
n
298
ILE
298
A
ARG
299
n
299
ARG
299
A
PRO
300
n
300
PRO
300
A
LEU
301
n
301
LEU
301
A
GLY
302
n
302
GLY
302
A
VAL
303
n
303
VAL
303
A
THR
304
n
304
THR
304
A
GLY
305
n
305
GLY
305
A
VAL
306
n
306
VAL
306
A
ALA
307
n
307
ALA
307
A
GLY
308
n
308
GLY
308
A
GLU
309
n
309
GLU
309
A
PRO
310
n
310
PRO
310
A
LEU
311
n
311
LEU
311
A
PRO
312
n
312
PRO
312
A
VAL
313
n
313
VAL
313
A
ASP
314
n
314
ASP
314
A
SER
315
n
315
SER
315
A
GLU
316
n
316
GLU
316
A
GLN
317
n
317
GLN
317
A
ASP
318
n
318
ASP
318
A
ILE
319
n
319
ILE
319
A
PHE
320
n
320
PHE
320
A
ASP
321
n
321
ASP
321
A
TYR
322
n
322
TYR
322
A
ILE
323
n
323
ILE
323
A
GLN
324
n
324
GLN
324
A
TRP
325
n
325
TRP
325
A
ARG
326
n
326
ARG
326
A
TYR
327
n
327
TYR
327
A
ARG
328
n
328
ARG
328
A
GLU
329
n
329
GLU
329
A
PRO
330
n
330
PRO
330
A
LYS
331
n
331
LYS
331
A
ASP
332
n
332
ASP
332
A
ARG
333
n
333
ARG
333
A
SER
334
n
334
SER
334
A
n
335
335
A
n
1
1
B
n
2
2
B
n
3
3
B
n
4
4
B
n
5
5
B
n
6
6
B
n
7
7
B
n
8
8
B
GLU
9
n
9
GLU
9
B
THR
10
n
10
THR
10
B
LEU
11
n
11
LEU
11
B
ASN
12
n
12
ASN
12
B
GLY
13
n
13
GLY
13
B
GLY
14
n
14
GLY
14
B
ILE
15
n
15
ILE
15
B
THR
16
n
16
THR
16
B
ASP
17
n
17
ASP
17
B
MET
18
n
18
MET
18
B
LEU
19
n
19
LEU
19
B
VAL
20
n
20
VAL
20
B
GLU
21
n
21
GLU
21
B
LEU
22
n
22
LEU
22
B
ALA
23
n
23
ALA
23
B
ASN
24
n
24
ASN
24
B
PHE
25
n
25
PHE
25
B
GLU
26
n
26
GLU
26
B
LYS
27
n
27
LYS
27
B
ASN
28
n
28
ASN
28
B
VAL
29
n
29
VAL
29
B
SER
30
n
30
SER
30
B
GLN
31
n
31
GLN
31
B
ALA
32
n
32
ALA
32
B
ILE
33
n
33
ILE
33
B
HIS
34
n
34
HIS
34
B
LYS
35
n
35
LYS
35
B
TYR
36
n
36
TYR
36
B
ASN
37
n
37
ASN
37
B
ALA
38
n
38
ALA
38
B
TYR
39
n
39
TYR
39
B
ARG
40
n
40
ARG
40
B
LYS
41
n
41
LYS
41
B
ALA
42
n
42
ALA
42
B
ALA
43
n
43
ALA
43
B
SER
44
n
44
SER
44
B
VAL
45
n
45
VAL
45
B
ILE
46
n
46
ILE
46
B
ALA
47
n
47
ALA
47
B
LYS
48
n
48
LYS
48
B
TYR
49
n
49
TYR
49
B
PRO
50
n
50
PRO
50
B
HIS
51
n
51
HIS
51
B
LYS
52
n
52
LYS
52
B
ILE
53
n
53
ILE
53
B
LYS
54
n
54
LYS
54
B
SER
55
n
55
SER
55
B
GLY
56
n
56
GLY
56
B
ALA
57
n
57
ALA
57
B
GLU
58
n
58
GLU
58
B
ALA
59
n
59
ALA
59
B
LYS
60
n
60
LYS
60
B
LYS
61
n
61
LYS
61
B
LEU
62
n
62
LEU
62
B
PRO
63
n
63
PRO
63
B
GLY
64
n
64
GLY
64
B
VAL
65
n
65
VAL
65
B
GLY
66
n
66
GLY
66
B
THR
67
n
67
THR
67
B
LYS
68
n
68
LYS
68
B
ILE
69
n
69
ILE
69
B
ALA
70
n
70
ALA
70
B
GLU
71
n
71
GLU
71
B
LYS
72
n
72
LYS
72
B
ILE
73
n
73
ILE
73
B
ASP
74
n
74
ASP
74
B
GLU
75
n
75
GLU
75
B
PHE
76
n
76
PHE
76
B
LEU
77
n
77
LEU
77
B
ALA
78
n
78
ALA
78
B
THR
79
n
79
THR
79
B
GLY
80
n
80
GLY
80
B
LYS
81
n
81
LYS
81
B
LEU
82
n
82
LEU
82
B
ARG
83
n
83
ARG
83
B
LYS
84
n
84
LYS
84
B
LEU
85
n
85
LEU
85
B
GLU
86
n
86
GLU
86
B
LYS
87
n
87
LYS
87
B
ILE
88
n
88
ILE
88
B
ARG
89
n
89
ARG
89
B
GLN
90
n
90
GLN
90
B
ASP
91
n
91
ASP
91
B
ASP
92
n
92
ASP
92
B
THR
93
n
93
THR
93
B
SER
94
n
94
SER
94
B
SER
95
n
95
SER
95
B
SER
96
n
96
SER
96
B
ILE
97
n
97
ILE
97
B
ASN
98
n
98
ASN
98
B
PHE
99
n
99
PHE
99
B
LEU
100
n
100
LEU
100
B
THR
101
n
101
THR
101
B
ARG
102
n
102
ARG
102
B
VAL
103
n
103
VAL
103
B
THR
104
n
104
THR
104
B
GLY
105
n
105
GLY
105
B
ILE
106
n
106
ILE
106
B
GLY
107
n
107
GLY
107
B
PRO
108
n
108
PRO
108
B
SER
109
n
109
SER
109
B
ALA
110
n
110
ALA
110
B
ALA
111
n
111
ALA
111
B
ARG
112
n
112
ARG
112
B
LYS
113
n
113
LYS
113
B
LEU
114
n
114
LEU
114
B
VAL
115
n
115
VAL
115
B
ASP
116
n
116
ASP
116
B
GLU
117
n
117
GLU
117
B
GLY
118
n
118
GLY
118
B
ILE
119
n
119
ILE
119
B
LYS
120
n
120
LYS
120
B
THR
121
n
121
THR
121
B
LEU
122
n
122
LEU
122
B
GLU
123
n
123
GLU
123
B
ASP
124
n
124
ASP
124
B
LEU
125
n
125
LEU
125
B
ARG
126
n
126
ARG
126
B
LYS
127
n
127
LYS
127
B
ASN
128
n
128
ASN
128
B
GLU
129
n
129
GLU
129
B
ASP
130
n
130
ASP
130
B
LYS
131
n
131
LYS
131
B
LEU
132
n
132
LEU
132
B
ASN
133
n
133
ASN
133
B
HIS
134
n
134
HIS
134
B
HIS
135
n
135
HIS
135
B
GLN
136
n
136
GLN
136
B
ARG
137
n
137
ARG
137
B
ILE
138
n
138
ILE
138
B
GLY
139
n
139
GLY
139
B
LEU
140
n
140
LEU
140
B
LYS
141
n
141
LYS
141
B
TYR
142
n
142
TYR
142
B
PHE
143
n
143
PHE
143
B
GLU
144
n
144
GLU
144
B
ASP
145
n
145
ASP
145
B
PHE
146
n
146
PHE
146
B
GLU
147
n
147
GLU
147
B
LYS
148
n
148
LYS
148
B
ARG
149
n
149
ARG
149
B
ILE
150
n
150
ILE
150
B
PRO
151
n
151
PRO
151
B
ARG
152
n
152
ARG
152
B
GLU
153
n
153
GLU
153
B
GLU
154
n
154
GLU
154
B
MET
155
n
155
MET
155
B
LEU
156
n
156
LEU
156
B
GLN
157
n
157
GLN
157
B
MET
158
n
158
MET
158
B
GLN
159
n
159
GLN
159
B
ASP
160
n
160
ASP
160
B
ILE
161
n
161
ILE
161
B
VAL
162
n
162
VAL
162
B
LEU
163
n
163
LEU
163
B
ASN
164
n
164
ASN
164
B
GLU
165
n
165
GLU
165
B
VAL
166
n
166
VAL
166
B
LYS
167
n
167
LYS
167
B
LYS
168
n
168
LYS
168
B
LEU
169
n
169
LEU
169
B
ASP
170
n
170
ASP
170
B
PRO
171
n
171
PRO
171
B
GLU
172
n
172
GLU
172
B
TYR
173
n
173
TYR
173
B
ILE
174
n
174
ILE
174
B
ALA
175
n
175
ALA
175
B
THR
176
n
176
THR
176
B
VAL
177
n
177
VAL
177
B
CYS
178
n
178
CYS
178
B
GLY
179
n
179
GLY
179
B
SER
180
n
180
SER
180
B
PHE
181
n
181
PHE
181
B
ARG
182
n
182
ARG
182
B
ARG
183
n
183
ARG
183
B
GLY
184
n
184
GLY
184
B
ALA
185
n
185
ALA
185
B
GLU
186
n
186
GLU
186
B
SER
187
n
187
SER
187
B
SER
188
n
188
SER
188
B
GLY
189
n
189
GLY
189
B
ASP
190
n
190
ASP
190
B
MET
191
n
191
MET
191
B
ASP
192
n
192
ASP
192
B
VAL
193
n
193
VAL
193
B
LEU
194
n
194
LEU
194
B
LEU
195
n
195
LEU
195
B
THR
196
n
196
THR
196
B
HIS
197
n
197
HIS
197
B
PRO
198
n
198
PRO
198
B
ASN
199
n
199
ASN
199
B
PHE
200
n
200
PHE
200
B
THR
201
n
201
THR
201
B
SER
202
n
202
SER
202
B
GLU
203
n
203
GLU
203
B
SER
204
n
204
SER
204
B
SER
205
n
205
SER
205
B
LYS
206
n
206
LYS
206
B
GLN
207
n
207
GLN
207
B
PRO
208
n
208
PRO
208
B
LYS
209
n
209
LYS
209
B
LEU
210
n
210
LEU
210
B
LEU
211
n
211
LEU
211
B
HIS
212
n
212
HIS
212
B
ARG
213
n
213
ARG
213
B
VAL
214
n
214
VAL
214
B
VAL
215
n
215
VAL
215
B
GLU
216
n
216
GLU
216
B
GLN
217
n
217
GLN
217
B
LEU
218
n
218
LEU
218
B
GLN
219
n
219
GLN
219
B
LYS
220
n
220
LYS
220
B
VAL
221
n
221
VAL
221
B
ARG
222
n
222
ARG
222
B
PHE
223
n
223
PHE
223
B
ILE
224
n
224
ILE
224
B
THR
225
n
225
THR
225
B
ASP
226
n
226
ASP
226
B
THR
227
n
227
THR
227
B
LEU
228
n
228
LEU
228
B
SER
229
n
229
SER
229
B
LYS
230
n
230
LYS
230
B
GLY
231
n
231
GLY
231
B
GLU
232
n
232
GLU
232
B
THR
233
n
233
THR
233
B
LYS
234
n
234
LYS
234
B
PHE
235
n
235
PHE
235
B
MET
236
n
236
MET
236
B
GLY
237
n
237
GLY
237
B
VAL
238
n
238
VAL
238
B
CYS
239
n
239
CYS
239
B
GLN
240
n
240
GLN
240
B
LEU
241
n
241
LEU
241
B
PRO
242
n
242
PRO
242
B
SER
243
n
243
SER
243
B
GLU
244
n
244
GLU
244
B
ASN
245
n
245
ASN
245
B
ASP
246
n
246
ASP
246
B
GLU
247
n
247
GLU
247
B
ASN
248
n
248
ASN
248
B
GLU
249
n
249
GLU
249
B
TYR
250
n
250
TYR
250
B
PRO
251
n
251
PRO
251
B
HIS
252
n
252
HIS
252
B
ARG
253
n
253
ARG
253
B
ARG
254
n
254
ARG
254
B
ILE
255
n
255
ILE
255
B
ASP
256
n
256
ASP
256
B
ILE
257
n
257
ILE
257
B
ARG
258
n
258
ARG
258
B
LEU
259
n
259
LEU
259
B
GLN
260
n
260
GLN
260
B
PRO
261
n
261
PRO
261
B
LYS
262
n
262
LYS
262
B
ASP
263
n
263
ASP
263
B
GLN
264
n
264
GLN
264
B
TYR
265
n
265
TYR
265
B
TYR
266
n
266
TYR
266
B
CYS
267
n
267
CYS
267
B
GLY
268
n
268
GLY
268
B
VAL
269
n
269
VAL
269
B
LEU
270
n
270
LEU
270
B
TYR
271
n
271
TYR
271
B
PHE
272
n
272
PHE
272
B
THR
273
n
273
THR
273
B
GLY
274
n
274
GLY
274
B
SER
275
n
275
SER
275
B
ASP
276
n
276
ASP
276
B
ILE
277
n
277
ILE
277
B
PHE
278
n
278
PHE
278
B
ASN
279
n
279
ASN
279
B
LYS
280
n
280
LYS
280
B
ASN
281
n
281
ASN
281
B
MET
282
n
282
MET
282
B
ARG
283
n
283
ARG
283
B
ALA
284
n
284
ALA
284
B
HIS
285
n
285
HIS
285
B
ALA
286
n
286
ALA
286
B
LEU
287
n
287
LEU
287
B
GLU
288
n
288
GLU
288
B
LYS
289
n
289
LYS
289
B
GLY
290
n
290
GLY
290
B
PHE
291
n
291
PHE
291
B
THR
292
n
292
THR
292
B
ILE
293
n
293
ILE
293
B
ASN
294
n
294
ASN
294
B
GLU
295
n
295
GLU
295
B
TYR
296
n
296
TYR
296
B
THR
297
n
297
THR
297
B
ILE
298
n
298
ILE
298
B
ARG
299
n
299
ARG
299
B
PRO
300
n
300
PRO
300
B
LEU
301
n
301
LEU
301
B
GLY
302
n
302
GLY
302
B
VAL
303
n
303
VAL
303
B
THR
304
n
304
THR
304
B
GLY
305
n
305
GLY
305
B
VAL
306
n
306
VAL
306
B
ALA
307
n
307
ALA
307
B
GLY
308
n
308
GLY
308
B
GLU
309
n
309
GLU
309
B
PRO
310
n
310
PRO
310
B
LEU
311
n
311
LEU
311
B
PRO
312
n
312
PRO
312
B
VAL
313
n
313
VAL
313
B
ASP
314
n
314
ASP
314
B
SER
315
n
315
SER
315
B
GLU
316
n
316
GLU
316
B
GLN
317
n
317
GLN
317
B
ASP
318
n
318
ASP
318
B
ILE
319
n
319
ILE
319
B
PHE
320
n
320
PHE
320
B
ASP
321
n
321
ASP
321
B
TYR
322
n
322
TYR
322
B
ILE
323
n
323
ILE
323
B
GLN
324
n
324
GLN
324
B
TRP
325
n
325
TRP
325
B
ARG
326
n
326
ARG
326
B
TYR
327
n
327
TYR
327
B
ARG
328
n
328
ARG
328
B
GLU
329
n
329
GLU
329
B
PRO
330
n
330
PRO
330
B
LYS
331
n
331
LYS
331
B
ASP
332
n
332
ASP
332
B
ARG
333
n
333
ARG
333
B
SER
334
n
334
SER
334
B
n
335
335
B
DA
1
n
1
DA
1
P
DT
2
n
2
DT
2
P
DG
3
n
3
DG
3
P
DT
4
n
4
DT
4
P
DG
5
n
5
DG
5
P
DA
6
n
6
DA
6
P
DG
7
n
7
DG
7
P
DA
3
n
1
DA
3
T
DC
4
n
2
DC
4
T
DT
5
n
3
DT
5
T
DC
6
n
4
DC
6
T
DA
7
n
5
DA
7
T
DC
8
n
6
DC
8
T
DA
9
n
7
DA
9
T
DT
10
n
8
DT
10
T
DA
11
n
9
DA
11
T
DA
1
n
1
DA
1
D
DT
2
n
2
DT
2
D
DG
3
n
3
DG
3
D
DT
4
n
4
DT
4
D
DG
5
n
5
DG
5
D
DA
6
n
6
DA
6
D
DG
7
n
7
DG
7
D
DA
3
n
1
DA
3
E
DC
4
n
2
DC
4
E
DT
5
n
3
DT
5
E
DC
6
n
4
DC
6
E
DA
7
n
5
DA
7
E
DC
8
n
6
DC
8
E
DA
9
n
7
DA
9
E
DT
10
n
8
DT
10
E
DA
11
n
9
DA
11
E
3.3147
0.4113
-0.0988
3.5311
0.3090
3.9375
0.2945
0.1087
-0.1752
0.1357
-0.1296
0.5545
0.8460
-0.2816
-0.1416
0.5719
-0.0692
-0.0780
0.4089
0.0371
0.5910
refined
-13.7385
-11.4364
-14.7591
X-RAY DIFFRACTION
2.6522
-2.9223
-0.7674
5.8095
-0.1938
0.1817
0.0364
-0.2602
0.0828
0.0993
-0.1078
-1.0255
-0.0699
0.1178
0.1087
0.4917
-0.0361
-0.0922
0.5298
-0.1121
0.9166
refined
59.0421
3.5147
-25.4678
X-RAY DIFFRACTION
6.1346
1.9349
-2.4425
6.0563
-1.8663
3.7915
-0.1457
0.7499
-0.6453
-0.1342
-0.1776
-0.2942
0.2710
0.2795
0.2710
0.4091
-0.0592
-0.0417
0.5482
-0.1327
0.4937
refined
9.6720
-1.0881
-24.7163
X-RAY DIFFRACTION
9.2887
2.2768
-0.9394
5.8003
0.0602
2.9518
-0.5793
0.8916
0.8937
-0.6269
0.2514
0.5870
0.3458
-0.6835
0.3712
0.5071
-0.1122
0.0335
0.7209
0.0403
0.6943
refined
35.4696
13.8430
-35.1046
X-RAY DIFFRACTION
A
9
A
150
X-RAY DIFFRACTION
1
( CHAIN A AND RESID 9:150 )
B
9
B
150
X-RAY DIFFRACTION
2
( CHAIN B AND RESID 9:150 )
A
151
A
334
X-RAY DIFFRACTION
3
( CHAIN A AND RESID 151:334 ) OR ( CHAIN P AND RESID 1:7 )
P
1
P
7
X-RAY DIFFRACTION
3
( CHAIN A AND RESID 151:334 ) OR ( CHAIN P AND RESID 1:7 )
B
151
B
334
X-RAY DIFFRACTION
4
( CHAIN B AND RESID 151:334 ) OR ( CHAIN D AND RESID 1:7 )
D
1
D
7
X-RAY DIFFRACTION
4
( CHAIN B AND RESID 151:334 ) OR ( CHAIN D AND RESID 1:7 )
author_and_software_defined_assembly
PISA
3
trimeric
author_and_software_defined_assembly
PISA
3
trimeric
4050
-56
18170
3920
-51
18500
A
THR
101
A
O
THR
101
1_555
A
NA
339
J
NA
NA
1_555
A
VAL
103
A
O
VAL
103
1_555
97.7
A
THR
101
A
O
THR
101
1_555
A
NA
339
J
NA
NA
1_555
A
ILE
106
A
O
ILE
106
1_555
85.4
A
VAL
103
A
O
VAL
103
1_555
A
NA
339
J
NA
NA
1_555
A
ILE
106
A
O
ILE
106
1_555
81.0
A
THR
101
A
O
THR
101
1_555
A
NA
339
J
NA
NA
1_555
P
DA
6
C
OP2
DA
6
1_555
134.8
A
VAL
103
A
O
VAL
103
1_555
A
NA
339
J
NA
NA
1_555
P
DA
6
C
OP2
DA
6
1_555
120.8
A
ILE
106
A
O
ILE
106
1_555
A
NA
339
J
NA
NA
1_555
P
DA
6
C
OP2
DA
6
1_555
79.0
A
ASP
190
A
OD1
ASP
190
1_555
A
NA
338
I
NA
NA
1_555
A
ASP
190
A
O
ASP
190
1_555
62.1
A
ASP
190
A
OD1
ASP
190
1_555
A
NA
338
I
NA
NA
1_555
A
ASP
192
A
OD2
ASP
192
1_555
90.3
A
ASP
190
A
O
ASP
190
1_555
A
NA
338
I
NA
NA
1_555
A
ASP
192
A
OD2
ASP
192
1_555
81.9
A
ASP
190
A
OD1
ASP
190
1_555
A
NA
338
I
NA
NA
1_555
A
D3T
336
G
O1B
D3T
1_555
141.3
A
ASP
190
A
O
ASP
190
1_555
A
NA
338
I
NA
NA
1_555
A
D3T
336
G
O1B
D3T
1_555
134.0
A
ASP
192
A
OD2
ASP
192
1_555
A
NA
338
I
NA
NA
1_555
A
D3T
336
G
O1B
D3T
1_555
123.5
A
ASP
190
A
OD1
ASP
190
1_555
A
NA
338
I
NA
NA
1_555
A
D3T
336
G
O1A
D3T
1_555
86.4
A
ASP
190
A
O
ASP
190
1_555
A
NA
338
I
NA
NA
1_555
A
D3T
336
G
O1A
D3T
1_555
147.9
A
ASP
192
A
OD2
ASP
192
1_555
A
NA
338
I
NA
NA
1_555
A
D3T
336
G
O1A
D3T
1_555
93.3
A
D3T
336
G
O1B
D3T
1_555
A
NA
338
I
NA
NA
1_555
A
D3T
336
G
O1A
D3T
1_555
74.4
B
THR
101
B
O
THR
101
1_555
B
NA
338
N
NA
NA
1_555
B
VAL
103
B
O
VAL
103
1_555
87.7
B
THR
101
B
O
THR
101
1_555
B
NA
338
N
NA
NA
1_555
B
ILE
106
B
O
ILE
106
1_555
92.9
B
VAL
103
B
O
VAL
103
1_555
B
NA
338
N
NA
NA
1_555
B
ILE
106
B
O
ILE
106
1_555
69.2
B
THR
101
B
O
THR
101
1_555
B
NA
338
N
NA
NA
1_555
D
DA
6
E
OP2
DA
6
1_555
156.7
B
VAL
103
B
O
VAL
103
1_555
B
NA
338
N
NA
NA
1_555
D
DA
6
E
OP2
DA
6
1_555
103.2
B
ILE
106
B
O
ILE
106
1_555
B
NA
338
N
NA
NA
1_555
D
DA
6
E
OP2
DA
6
1_555
72.5
B
ASP
192
B
OD2
ASP
192
1_555
B
NA
337
M
NA
NA
1_555
B
D3T
336
L
O1A
D3T
1_555
65.1
B
ASP
192
B
OD2
ASP
192
1_555
B
NA
337
M
NA
NA
1_555
B
D3T
336
L
O1B
D3T
1_555
80.4
B
D3T
336
L
O1A
D3T
1_555
B
NA
337
M
NA
NA
1_555
B
D3T
336
L
O1B
D3T
1_555
56.8
B
ASP
192
B
OD2
ASP
192
1_555
B
NA
337
M
NA
NA
1_555
B
D3T
336
L
O3B
D3T
1_555
117.5
B
D3T
336
L
O1A
D3T
1_555
B
NA
337
M
NA
NA
1_555
B
D3T
336
L
O3B
D3T
1_555
57.5
B
D3T
336
L
O1B
D3T
1_555
B
NA
337
M
NA
NA
1_555
B
D3T
336
L
O3B
D3T
1_555
49.3
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ILE
150
A
N
ILE
150
A
O
SER
188
A
O
SER
188
A
N
ILE
174
A
N
ILE
174
A
O
THR
196
A
O
THR
196
A
N
LEU
195
A
N
LEU
195
A
O
ARG
258
A
O
ARG
258
A
O
ILE
255
A
O
ILE
255
A
N
GLY
237
A
N
GLY
237
A
O
MET
236
A
O
MET
236
A
N
SER
229
A
N
SER
229
B
N
ILE
150
B
N
ILE
150
B
O
SER
188
B
O
SER
188
B
N
ILE
174
B
N
ILE
174
B
O
THR
196
B
O
THR
196
B
N
LEU
195
B
N
LEU
195
B
O
ARG
258
B
O
ARG
258
B
O
ARG
253
B
O
ARG
253
B
N
CYS
239
B
N
CYS
239
B
O
VAL
238
B
O
VAL
238
B
N
THR
225
B
N
THR
225
B
N
THR
292
B
N
THR
292
B
O
ARG
299
B
O
ARG
299
1
P
O3'
DG
7
C
O3'
DG
7
0
Y
1
T
C5'
DA
11
D
C5'
DA
9
1
Y
1
T
C4'
DA
11
D
C4'
DA
9
1
Y
1
T
O4'
DA
11
D
O4'
DA
9
1
Y
1
T
C3'
DA
11
D
C3'
DA
9
1
Y
1
T
O3'
DA
11
D
O3'
DA
9
1
Y
1
T
C2'
DA
11
D
C2'
DA
9
1
Y
1
T
C1'
DA
11
D
C1'
DA
9
1
Y
1
T
N9
DA
11
D
N9
DA
9
1
Y
1
T
C8
DA
11
D
C8
DA
9
1
Y
1
T
N7
DA
11
D
N7
DA
9
1
Y
1
T
C5
DA
11
D
C5
DA
9
1
Y
1
T
C6
DA
11
D
C6
DA
9
1
Y
1
T
N6
DA
11
D
N6
DA
9
1
Y
1
T
N1
DA
11
D
N1
DA
9
1
Y
1
T
C2
DA
11
D
C2
DA
9
1
Y
1
T
N3
DA
11
D
N3
DA
9
1
Y
1
T
C4
DA
11
D
C4
DA
9
1
Y
1
D
O3'
DG
7
E
O3'
DG
7
0
Y
1
E
C5'
DA
11
F
C5'
DA
9
1
Y
1
E
C4'
DA
11
F
C4'
DA
9
1
Y
1
E
O4'
DA
11
F
O4'
DA
9
1
Y
1
E
C3'
DA
11
F
C3'
DA
9
1
Y
1
E
O3'
DA
11
F
O3'
DA
9
1
Y
1
E
C2'
DA
11
F
C2'
DA
9
1
Y
1
E
C1'
DA
11
F
C1'
DA
9
1
Y
1
E
N9
DA
11
F
N9
DA
9
1
Y
1
E
C8
DA
11
F
C8
DA
9
1
Y
1
E
N7
DA
11
F
N7
DA
9
1
Y
1
E
C5
DA
11
F
C5
DA
9
1
Y
1
E
C6
DA
11
F
C6
DA
9
1
Y
1
E
N6
DA
11
F
N6
DA
9
1
Y
1
E
N1
DA
11
F
N1
DA
9
1
Y
1
E
C2
DA
11
F
C2
DA
9
1
Y
1
E
N3
DA
11
F
N3
DA
9
1
Y
1
E
C4
DA
11
F
C4
DA
9
1
Y
1
A
MET
1
A
MET
1
1
Y
1
A
SER
2
A
SER
2
1
Y
1
A
LYS
3
A
LYS
3
1
Y
1
A
ARG
4
A
ARG
4
1
Y
1
A
LYS
5
A
LYS
5
1
Y
1
A
ALA
6
A
ALA
6
1
Y
1
A
PRO
7
A
PRO
7
1
Y
1
A
GLN
8
A
GLN
8
1
Y
1
A
GLU
9
A
GLU
9
0
Y
1
A
GLU
335
A
GLU
335
1
Y
1
B
MET
1
B
MET
1
1
Y
1
B
SER
2
B
SER
2
1
Y
1
B
LYS
3
B
LYS
3
1
Y
1
B
ARG
4
B
ARG
4
1
Y
1
B
LYS
5
B
LYS
5
1
Y
1
B
ALA
6
B
ALA
6
1
Y
1
B
PRO
7
B
PRO
7
1
Y
1
B
GLN
8
B
GLN
8
1
Y
1
B
GLU
9
B
GLU
9
0
Y
1
B
GLU
335
B
GLU
335
1
Y
1
A
A
OH
O
TYR
LEU
173
210
2.18
1
A
A
GLN
ALA
31
32
-148.92
1
11.20
1.50
119.30
130.50
A
A
A
C
N
CA
GLU
PRO
PRO
309
310
310
Y
1
9.32
1.50
119.30
128.62
B
B
B
C
N
CA
TYR
PRO
PRO
49
50
50
Y
1
-4.74
0.40
104.50
99.76
P
P
P
O4'
C4'
C3'
DA
DA
DA
1
1
1
N
1
3.34
0.30
108.30
111.64
P
P
P
O4'
C1'
N9
DA
DA
DA
1
1
1
N
1
-6.34
0.40
104.50
98.16
P
P
P
O4'
C4'
C3'
DT
DT
DT
4
4
4
N
1
-6.46
1.00
110.10
103.64
P
P
P
C1'
O4'
C4'
DT
DT
DT
4
4
4
N
1
6.79
0.30
108.30
115.09
P
P
P
O4'
C1'
N1
DT
DT
DT
4
4
4
N
1
-4.17
0.60
122.30
118.13
P
P
P
N3
C2
O2
DT
DT
DT
4
4
4
N
1
-9.73
1.60
120.90
111.17
P
P
P
P
O5'
C5'
DG
DG
DG
5
5
5
N
1
-4.38
0.40
104.50
100.12
P
P
P
O4'
C4'
C3'
DG
DG
DG
5
5
5
N
1
6.80
0.30
108.30
115.10
P
P
P
O4'
C1'
N9
DG
DG
DG
5
5
5
N
1
2.72
0.30
108.30
111.02
P
P
P
O4'
C1'
N9
DA
DA
DA
6
6
6
N
1
-4.82
0.70
108.00
103.18
P
P
P
O4'
C1'
N9
DG
DG
DG
7
7
7
N
1
3.91
0.60
118.90
122.81
T
T
T
N1
C2
O2
DC
DC
DC
4
4
4
N
1
-4.38
0.70
121.90
117.52
T
T
T
N3
C2
O2
DC
DC
DC
4
4
4
N
1
2.99
0.30
108.30
111.29
T
T
T
O4'
C1'
N1
DC
DC
DC
6
6
6
N
1
5.71
0.60
118.60
124.31
T
T
T
N1
C6
N6
DA
DA
DA
7
7
7
N
1
-5.64
0.40
104.50
98.86
T
T
T
O4'
C4'
C3'
DC
DC
DC
8
8
8
N
1
3.66
0.30
108.30
111.96
T
T
T
O4'
C1'
N1
DC
DC
DC
8
8
8
N
1
4.22
0.60
118.60
122.82
T
T
T
N1
C6
N6
DA
DA
DA
9
9
9
N
1
-3.93
0.40
104.50
100.57
T
T
T
O4'
C4'
C3'
DT
DT
DT
10
10
10
N
1
2.63
0.30
108.30
110.93
T
T
T
O4'
C1'
N1
DT
DT
DT
10
10
10
N
1
10.42
1.60
120.90
131.32
D
D
D
P
O5'
C5'
DA
DA
DA
1
1
1
N
1
-7.88
0.40
104.50
96.62
D
D
D
O4'
C4'
C3'
DA
DA
DA
1
1
1
N
1
2.00
0.30
108.30
110.30
D
D
D
O4'
C1'
N9
DA
DA
DA
1
1
1
N
1
2.76
0.30
108.30
111.06
D
D
D
O4'
C1'
N1
DT
DT
DT
2
2
2
N
1
-4.45
0.40
104.50
100.05
D
D
D
O4'
C4'
C3'
DT
DT
DT
4
4
4
N
1
4.82
0.30
108.30
113.12
D
D
D
O4'
C1'
N1
DT
DT
DT
4
4
4
N
1
-4.78
0.60
122.30
117.52
D
D
D
N3
C2
O2
DT
DT
DT
4
4
4
N
1
-2.76
0.40
104.50
101.74
D
D
D
O4'
C4'
C3'
DG
DG
DG
5
5
5
N
1
6.17
0.30
108.30
114.47
D
D
D
O4'
C1'
N9
DG
DG
DG
5
5
5
N
1
-2.99
0.40
104.50
101.51
E
E
E
O4'
C4'
C3'
DA
DA
DA
3
3
3
N
1
-2.90
0.40
104.50
101.60
E
E
E
O4'
C4'
C3'
DC
DC
DC
4
4
4
N
1
-8.05
1.00
110.10
102.05
E
E
E
C1'
O4'
C4'
DC
DC
DC
4
4
4
N
1
3.73
0.30
108.30
112.03
E
E
E
O4'
C1'
N1
DC
DC
DC
4
4
4
N
1
-3.25
0.40
104.50
101.25
E
E
E
O4'
C4'
C3'
DT
DT
DT
5
5
5
N
1
4.66
0.30
108.30
112.96
E
E
E
O4'
C1'
N1
DT
DT
DT
5
5
5
N
1
2.45
0.30
108.30
110.75
E
E
E
O4'
C1'
N1
DC
DC
DC
6
6
6
N
1
5.30
0.30
108.30
113.60
E
E
E
O4'
C1'
N1
DC
DC
DC
8
8
8
N
1
-4.88
0.80
102.40
97.52
E
E
E
C3'
C2'
C1'
DA
DA
DA
9
9
9
N
1
T
T
O3'
C3'
DA
DA
7
7
-0.043
0.006
1.419
1.376
N
1
E
E
O3'
C3'
DC
DC
8
8
0.082
0.013
1.435
1.517
N
1
A
LEU
11
-81.13
43.17
1
A
ASN
24
-52.72
-7.97
1
A
LYS
81
-123.61
-141.73
1
A
THR
101
-29.43
-30.96
1
A
LYS
120
-140.30
-14.95
1
A
ASN
128
-142.30
44.31
1
A
LEU
140
-57.75
-71.38
1
A
GLU
153
-36.03
-39.05
1
A
ASP
170
178.57
101.72
1
A
PRO
171
-59.77
-7.09
1
A
CYS
178
-118.10
-144.43
1
A
LYS
206
64.66
-91.18
1
A
SER
229
-170.44
141.96
1
A
GLN
240
-173.08
126.75
1
A
SER
243
-48.22
96.26
1
A
GLU
244
-57.40
60.14
1
A
ASN
245
62.86
98.11
1
A
ASP
246
54.85
118.31
1
A
GLU
247
82.54
-50.89
1
A
GLU
249
-6.93
130.13
1
A
GLN
264
-108.97
41.68
1
A
PHE
272
-66.17
-89.20
1
A
THR
273
-31.95
90.94
1
A
HIS
285
-67.72
25.69
1
A
ASN
294
-111.06
-166.82
1
A
VAL
303
-48.86
-74.36
1
A
THR
304
-79.28
-110.30
1
A
PRO
310
-31.84
-133.26
1
A
LEU
311
-177.67
136.80
1
A
GLN
317
-32.98
-39.47
1
A
PRO
330
-61.59
94.84
1
A
LYS
331
162.02
-14.29
1
B
GLU
117
-99.45
-124.13
1
B
LYS
120
-135.65
-33.94
1
B
ASP
160
-94.24
58.38
1
B
ILE
161
-139.16
-41.99
1
B
ASP
170
-169.96
109.45
1
B
CYS
178
-126.39
-147.64
1
B
ARG
182
161.76
12.23
1
B
ASP
190
172.12
164.66
1
B
SER
205
61.85
133.80
1
B
GLN
207
-40.56
102.85
1
B
GLN
207
-40.48
102.84
1
B
ARG
222
35.85
45.47
1
B
PRO
242
-53.08
107.74
1
B
SER
243
-54.19
81.87
1
B
ASN
245
57.53
-165.24
1
B
ASP
246
-57.07
60.34
1
B
GLU
247
61.80
109.36
1
B
PRO
261
-50.35
101.96
1
B
SER
275
177.02
166.25
1
B
ASP
276
-25.64
-70.80
1
B
GLU
295
-59.95
6.63
1
B
VAL
303
-60.03
55.77
1
B
THR
304
-146.01
-64.84
1
B
ASP
314
-156.60
1.68
1
B
GLN
324
59.44
7.16
1
B
LYS
331
-57.43
-8.75
-10.8835
-0.0000
2.5565
-13.1072
-0.0000
23.9908
0.2920
0.2182
0.24
0.2248
2.723
27.195
2008
25030
8.02
90.08
0.85
random
1
0.09
MOLECULAR REPLACEMENT
35.81
0.98
1.20
ML
FLAT BULK SOLVENT MODEL
38.015
0.271
2.723
27.195
41
5976
63
624
5248
0.009
6136
1.479
8402
21.693
2420
0.096
912
0.005
982
0.4549
0.3514
2.7907
102
1202
66.00
0.3993
0.3488
2.8660
126
1426
78.00
0.4363
0.3267
2.9503
142
1403
79.00
0.3776
0.3102
3.0454
125
1466
82.00
0.3729
0.2820
3.1541
138
1563
87.00
0.3270
0.2643
3.2801
138
1673
91.00
0.3475
0.2623
3.4292
146
1655
92.00
0.3828
0.2587
3.6096
144
1747
95.00
0.3205
0.2244
3.8351
160
1753
97.00
0.2990
0.1834
4.1303
151
1763
96.00
0.2436
0.1614
4.5442
156
1815
99.00
0.2482
0.1708
5.1978
157
1824
98.00
0.2825
0.2073
6.5337
155
1817
99.00
0.2587
0.1994
27.1959
168
1915
100.00
2.723
27.195
3UXP
25030
1.0
1.0
1
90.08
2.7226
2.7907
1
66
2.7907
2.8660
1
78
2.8660
2.9503
1
79
2.9503
3.0454
1
82
3.0454
3.1541
1
87
3.1541
3.2801
1
91
data collection
CBASS
phasing
PHASER
refinement
PHENIX
(phenix.refine: 1.7.2_869)
data reduction
HKL-2000
data scaling
HKL-2000
Co-crystal Structure of Rat DNA polymerase beta Mutator I260Q: Enzyme-DNA-ddTTP
1
N
N
1
N
N
2
N
N
3
N
N
2
N
N
3
N
N
4
N
N
5
N
N
5
N
N
5
N
N
5
N
N
4
N
N
5
N
N
5
N
N
5
N
N
6
N
N
6
N
N
6
N
N
6
N
N
6
N
N
6
N
N
A
ASN
12
A
ASN
12
HELX_P
A
VAL
29
A
VAL
29
1
1
18
A
ILE
33
A
ILE
33
HELX_P
A
TYR
49
A
TYR
49
1
2
17
A
SER
55
A
SER
55
HELX_P
A
LYS
61
A
LYS
61
1
3
7
A
GLY
66
A
GLY
66
HELX_P
A
THR
79
A
THR
79
1
4
14
A
ARG
83
A
ARG
83
HELX_P
A
GLN
90
A
GLN
90
1
5
8
A
ASP
91
A
ASP
91
HELX_P
A
THR
101
A
THR
101
1
6
11
A
GLY
107
A
GLY
107
HELX_P
A
GLU
117
A
GLU
117
1
7
11
A
THR
121
A
THR
121
HELX_P
A
LYS
127
A
LYS
127
1
8
7
A
ASN
128
A
ASN
128
HELX_P
A
LEU
132
A
LEU
132
5
9
5
A
ASN
133
A
ASN
133
HELX_P
A
TYR
142
A
TYR
142
1
10
10
A
TYR
142
A
TYR
142
HELX_P
A
LYS
148
A
LYS
148
1
11
7
A
ARG
152
A
ARG
152
HELX_P
A
ASP
170
A
ASP
170
1
12
19
A
CYS
178
A
CYS
178
HELX_P
A
ARG
183
A
ARG
183
1
13
6
A
GLN
207
A
GLN
207
HELX_P
A
VAL
221
A
VAL
221
1
14
15
A
PRO
261
A
PRO
261
HELX_P
A
ASP
263
A
ASP
263
5
15
3
A
GLN
264
A
GLN
264
HELX_P
A
THR
273
A
THR
273
1
16
10
A
SER
275
A
SER
275
HELX_P
A
HIS
285
A
HIS
285
1
17
11
A
SER
315
A
SER
315
HELX_P
A
ILE
323
A
ILE
323
1
18
9
B
ASN
12
B
ASN
12
HELX_P
B
VAL
29
B
VAL
29
1
19
18
B
ALA
32
B
ALA
32
HELX_P
B
TYR
49
B
TYR
49
1
20
18
B
SER
55
B
SER
55
HELX_P
B
LYS
61
B
LYS
61
1
21
7
B
GLY
66
B
GLY
66
HELX_P
B
GLY
80
B
GLY
80
1
22
15
B
LEU
82
B
LEU
82
HELX_P
B
ARG
89
B
ARG
89
1
23
8
B
ASP
91
B
ASP
91
HELX_P
B
THR
101
B
THR
101
1
24
11
B
PRO
108
B
PRO
108
HELX_P
B
ASP
116
B
ASP
116
1
25
9
B
THR
121
B
THR
121
HELX_P
B
ASN
128
B
ASN
128
1
26
8
B
GLU
129
B
GLU
129
HELX_P
B
LEU
132
B
LEU
132
5
27
4
B
ASN
133
B
ASN
133
HELX_P
B
TYR
142
B
TYR
142
1
28
10
B
TYR
142
B
TYR
142
HELX_P
B
LYS
148
B
LYS
148
1
29
7
B
ARG
152
B
ARG
152
HELX_P
B
ASP
170
B
ASP
170
1
30
19
B
PRO
208
B
PRO
208
HELX_P
B
VAL
221
B
VAL
221
1
31
14
B
GLN
264
B
GLN
264
HELX_P
B
GLY
274
B
GLY
274
1
32
11
B
SER
275
B
SER
275
HELX_P
B
ALA
286
B
ALA
286
1
33
12
B
SER
315
B
SER
315
HELX_P
B
ILE
323
B
ILE
323
1
34
9
B
GLU
329
B
GLU
329
HELX_P
B
ARG
333
B
ARG
333
5
35
5
metalc
2.317
A
THR
101
A
O
THR
101
1_555
A
NA
339
J
NA
NA
1_555
metalc
2.292
A
VAL
103
A
O
VAL
103
1_555
A
NA
339
J
NA
NA
1_555
metalc
2.358
A
ILE
106
A
O
ILE
106
1_555
A
NA
339
J
NA
NA
1_555
metalc
2.264
A
ASP
190
A
OD1
ASP
190
1_555
A
NA
338
I
NA
NA
1_555
metalc
2.647
A
ASP
190
A
O
ASP
190
1_555
A
NA
338
I
NA
NA
1_555
metalc
2.035
A
ASP
192
A
OD2
ASP
192
1_555
A
NA
338
I
NA
NA
1_555
metalc
2.004
A
D3T
336
G
O1B
D3T
1_555
A
NA
338
I
NA
NA
1_555
metalc
2.151
A
D3T
336
G
O1A
D3T
1_555
A
NA
338
I
NA
NA
1_555
metalc
2.209
A
NA
339
J
NA
NA
1_555
P
DA
6
C
OP2
DA
6
1_555
metalc
2.146
B
THR
101
B
O
THR
101
1_555
B
NA
338
N
NA
NA
1_555
metalc
2.568
B
VAL
103
B
O
VAL
103
1_555
B
NA
338
N
NA
NA
1_555
metalc
2.890
B
ILE
106
B
O
ILE
106
1_555
B
NA
338
N
NA
NA
1_555
metalc
2.703
B
ASP
192
B
OD2
ASP
192
1_555
B
NA
337
M
NA
NA
1_555
metalc
2.548
B
D3T
336
L
O1A
D3T
1_555
B
NA
337
M
NA
NA
1_555
metalc
3.024
B
D3T
336
L
O1B
D3T
1_555
B
NA
337
M
NA
NA
1_555
metalc
3.125
B
D3T
336
L
O3B
D3T
1_555
B
NA
337
M
NA
NA
1_555
metalc
2.410
B
NA
338
N
NA
NA
1_555
D
DA
6
E
OP2
DA
6
1_555
hydrog
WATSON-CRICK
P
DT
2
C
N3
DT
2
1_555
T
DA
9
D
N1
DA
7
1_555
hydrog
WATSON-CRICK
P
DT
2
C
O4
DT
2
1_555
T
DA
9
D
N6
DA
7
1_555
hydrog
WATSON-CRICK
P
DG
3
C
N1
DG
3
1_555
T
DC
8
D
N3
DC
6
1_555
hydrog
WATSON-CRICK
P
DG
3
C
N2
DG
3
1_555
T
DC
8
D
O2
DC
6
1_555
hydrog
WATSON-CRICK
P
DG
3
C
O6
DG
3
1_555
T
DC
8
D
N4
DC
6
1_555
hydrog
WATSON-CRICK
P
DT
4
C
N3
DT
4
1_555
T
DA
7
D
N1
DA
5
1_555
hydrog
WATSON-CRICK
P
DT
4
C
O4
DT
4
1_555
T
DA
7
D
N6
DA
5
1_555
hydrog
WATSON-CRICK
P
DG
5
C
N1
DG
5
1_555
T
DC
6
D
N3
DC
4
1_555
hydrog
WATSON-CRICK
P
DG
5
C
N2
DG
5
1_555
T
DC
6
D
O2
DC
4
1_555
hydrog
WATSON-CRICK
P
DG
5
C
O6
DG
5
1_555
T
DC
6
D
N4
DC
4
1_555
hydrog
WATSON-CRICK
P
DA
6
C
N1
DA
6
1_555
T
DT
5
D
N3
DT
3
1_555
hydrog
WATSON-CRICK
P
DA
6
C
N6
DA
6
1_555
T
DT
5
D
O4
DT
3
1_555
hydrog
DG-DC PAIR
P
DG
7
C
N2
DG
7
1_555
T
DC
4
D
O2
DC
2
1_555
hydrog
WATSON-CRICK
D
DT
2
E
N3
DT
2
1_555
E
DA
9
F
N1
DA
7
1_555
hydrog
WATSON-CRICK
D
DT
2
E
O4
DT
2
1_555
E
DA
9
F
N6
DA
7
1_555
hydrog
WATSON-CRICK
D
DG
3
E
N1
DG
3
1_555
E
DC
8
F
N3
DC
6
1_555
hydrog
WATSON-CRICK
D
DG
3
E
N2
DG
3
1_555
E
DC
8
F
O2
DC
6
1_555
hydrog
WATSON-CRICK
D
DG
3
E
O6
DG
3
1_555
E
DC
8
F
N4
DC
6
1_555
hydrog
WATSON-CRICK
D
DT
4
E
N3
DT
4
1_555
E
DA
7
F
N1
DA
5
1_555
hydrog
WATSON-CRICK
D
DT
4
E
O4
DT
4
1_555
E
DA
7
F
N6
DA
5
1_555
hydrog
WATSON-CRICK
D
DG
5
E
N1
DG
5
1_555
E
DC
6
F
N3
DC
4
1_555
hydrog
WATSON-CRICK
D
DG
5
E
N2
DG
5
1_555
E
DC
6
F
O2
DC
4
1_555
hydrog
WATSON-CRICK
D
DG
5
E
O6
DG
5
1_555
E
DC
6
F
N4
DC
4
1_555
hydrog
WATSON-CRICK
D
DA
6
E
N1
DA
6
1_555
E
DT
5
F
N3
DT
3
1_555
hydrog
WATSON-CRICK
D
DA
6
E
N6
DA
6
1_555
E
DT
5
F
O4
DT
3
1_555
hydrog
DG-DC PAIR
D
DG
7
E
N1
DG
7
1_555
E
DC
4
F
N3
DC
2
1_555
hydrog
DG-DT MISPAIR
D
DG
7
E
N2
DG
7
1_555
E
DT
5
F
O2
DT
3
1_555
TRANSFERASE, LYASE/DNA
pol beta, repair polymerase, BER, TRANSFERASE, LYASE-DNA complex
A
GLY
274
A
GLY
274
1
A
SER
275
A
SER
275
0.49
DPOLB_RAT
UNP
1
1
P06766
MSKRKAPQETLNGGITDMLVELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG
KLRKLEKIRQDDTSSSINFLTRVTGIGPSAARKLVDEGIKTLEDLRKNEDKLNHHQRIGLKYFEDFEKRIPREEMLQMQD
IVLNEVKKLDPEYIATVCGSFRRGAESSGDMDVLLTHPNFTSESSKQPKLLHRVVEQLQKVRFITDTLSKGETKFMGVCQ
LPSENDENEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEQDIF
DYIQWRYREPKDRSE
3UXP
PDB
2
3UXP
3UXP
PDB
3
3UXP
1
335
3UXP
1
335
P06766
A
1
1
335
1
335
3UXP
1
335
P06766
B
1
1
335
1
7
3UXP
1
7
3UXP
P
2
1
7
1
7
3UXP
1
7
3UXP
D
2
1
7
3
11
3UXP
3
11
3UXP
T
3
1
9
3
11
3UXP
3
11
3UXP
E
3
1
9
1
ILE
engineered mutation
GLN
260
3UXP
A
P06766
UNP
260
260
2
ILE
engineered mutation
GLN
260
3UXP
B
P06766
UNP
260
260
2
5
2
5
2
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
A
ILE
150
A
ILE
150
A
PRO
151
A
PRO
151
A
SER
187
A
SER
187
A
SER
188
A
SER
188
A
ILE
174
A
ILE
174
A
VAL
177
A
VAL
177
A
MET
191
A
MET
191
A
THR
196
A
THR
196
A
ARG
253
A
ARG
253
A
GLN
260
A
GLN
260
A
LYS
234
A
LYS
234
A
CYS
239
A
CYS
239
A
ILE
224
A
ILE
224
A
LYS
230
A
LYS
230
B
ILE
150
B
ILE
150
B
PRO
151
B
PRO
151
B
SER
187
B
SER
187
B
SER
188
B
SER
188
B
ILE
174
B
ILE
174
B
VAL
177
B
VAL
177
B
ASP
192
B
ASP
192
B
THR
196
B
THR
196
B
ARG
253
B
ARG
253
B
LEU
259
B
LEU
259
B
LYS
234
B
LYS
234
B
CYS
239
B
CYS
239
B
ILE
224
B
ILE
224
B
LYS
230
B
LYS
230
B
PHE
291
B
PHE
291
B
ILE
293
B
ILE
293
B
ILE
298
B
ILE
298
B
PRO
300
B
PRO
300
BINDING SITE FOR RESIDUE D3T A 336
A
D3T
336
Software
17
BINDING SITE FOR RESIDUE NA A 337
A
NA
337
Software
5
BINDING SITE FOR RESIDUE NA A 338
A
NA
338
Software
3
BINDING SITE FOR RESIDUE NA A 339
A
NA
339
Software
5
BINDING SITE FOR RESIDUE NA A 340
A
NA
340
Software
5
BINDING SITE FOR RESIDUE D3T B 336
B
D3T
336
Software
12
BINDING SITE FOR RESIDUE NA B 337
B
NA
337
Software
3
BINDING SITE FOR RESIDUE NA B 338
B
NA
338
Software
4
BINDING SITE FOR RESIDUE NA B 339
B
NA
339
Software
4
A
ARG
149
A
ARG
149
17
1_555
A
GLY
179
A
GLY
179
17
1_555
A
SER
180
A
SER
180
17
1_555
A
ARG
183
A
ARG
183
17
1_555
A
SER
188
A
SER
188
17
1_555
A
GLY
189
A
GLY
189
17
1_555
A
ASP
190
A
ASP
190
17
1_555
A
ASP
192
A
ASP
192
17
1_555
A
TYR
271
A
TYR
271
17
1_555
A
PHE
272
A
PHE
272
17
1_555
A
ASP
276
A
ASP
276
17
1_555
A
ASN
279
A
ASN
279
17
1_555
A
NA
337
H
NA
17
1_555
A
NA
338
I
NA
17
1_555
A
HOH
342
P
HOH
17
1_555
P
DG
7
C
DG
7
17
1_555
T
DA
3
D
DA
1
17
1_555
A
ASP
190
A
ASP
190
5
1_555
A
ASP
192
A
ASP
192
5
1_555
A
ASP
256
A
ASP
256
5
1_555
A
D3T
336
G
D3T
5
1_555
P
DG
7
C
DG
7
5
1_555
A
ASP
190
A
ASP
190
3
1_555
A
ASP
192
A
ASP
192
3
1_555
A
D3T
336
G
D3T
3
1_555
A
THR
101
A
THR
101
5
1_555
A
VAL
103
A
VAL
103
5
1_555
A
THR
104
A
THR
104
5
1_555
A
ILE
106
A
ILE
106
5
1_555
P
DA
6
C
DA
6
5
1_555
A
ARG
283
A
ARG
283
5
1_555
A
THR
292
A
THR
292
5
1_555
A
ILE
293
A
ILE
293
5
1_555
T
DA
3
D
DA
1
5
1_555
T
DC
4
D
DC
2
5
1_555
B
ARG
149
B
ARG
149
12
1_555
B
GLY
179
B
GLY
179
12
1_555
B
SER
180
B
SER
180
12
1_555
B
SER
188
B
SER
188
12
1_555
B
GLY
189
B
GLY
189
12
1_555
B
ASP
190
B
ASP
190
12
1_555
B
ASP
192
B
ASP
192
12
1_555
B
TYR
271
B
TYR
271
12
1_555
B
ASN
279
B
ASN
279
12
1_555
B
NA
337
M
NA
12
1_555
D
DG
7
E
DG
7
12
1_555
E
DA
3
F
DA
1
12
1_555
B
ASP
190
B
ASP
190
3
1_555
B
ASP
192
B
ASP
192
3
1_555
B
D3T
336
L
D3T
3
1_555
B
THR
101
B
THR
101
4
1_555
B
VAL
103
B
VAL
103
4
1_555
B
ILE
106
B
ILE
106
4
1_555
D
DA
6
E
DA
6
4
1_555
B
ARG
283
B
ARG
283
4
1_555
B
PHE
291
B
PHE
291
4
1_555
B
ILE
293
B
ILE
293
4
1_555
E
DC
4
F
DC
2
4
1_555
4
P 1 21 1