0.011297
0.006522
0.000000
0.000000
0.013044
0.000000
0.000000
0.000000
0.007459
0.000000
0.000000
0.000000
Holzapfel, G.
Mattos, C.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
18
90.000
90.000
120.000
88.521
88.521
134.060
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Ca 2
40.078
CALCIUM ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C4 H10 O2 S2
154.251
(2R,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C10 H17 N6 O13 P3
522.196
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Mg 2
24.305
MAGNESIUM ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
CA
N
75
N
N
N
76
R
C
N
77
N
C
N
78
N
O
N
79
N
C
N
80
N
S
N
81
N
O
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
S
N
90
N
C
N
91
S
C
N
92
N
O
N
93
R
C
N
94
N
O
N
95
N
C
N
96
N
S
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
N
N
108
S
C
N
109
N
C
N
110
N
O
N
111
N
C
N
112
N
C
N
113
N
C
N
114
N
O
N
115
N
N
N
116
N
O
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
S
C
N
129
N
C
N
130
N
O
N
131
N
C
N
132
N
C
N
133
N
C
N
134
N
O
N
135
N
O
N
136
N
O
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
N
N
147
N
C
N
148
N
C
N
149
N
O
N
150
N
O
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
P
N
157
N
O
N
158
N
O
N
159
N
O
N
160
N
N
N
161
R
P
N
162
N
O
N
163
N
O
N
164
N
O
N
165
S
P
N
166
N
O
N
167
N
O
N
168
N
O
N
169
N
C
N
170
R
C
N
171
N
O
N
172
S
C
N
173
N
O
N
174
R
C
N
175
N
O
N
176
R
C
Y
177
N
N
Y
178
N
C
Y
179
N
N
Y
180
N
C
Y
181
N
C
N
182
N
O
Y
183
N
N
Y
184
N
C
N
185
N
N
Y
186
N
N
Y
187
N
C
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
Y
210
N
C
Y
211
N
N
Y
212
N
C
Y
213
N
C
Y
214
N
N
N
215
N
O
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
O
N
227
N
H
N
228
N
H
N
229
N
N
N
230
S
C
N
231
N
C
N
232
N
O
N
233
S
C
N
234
N
C
N
235
N
C
N
236
N
C
N
237
N
O
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
N
N
252
S
C
N
253
N
C
N
254
N
O
N
255
N
C
N
256
N
C
N
257
N
C
N
258
N
C
N
259
N
O
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
C
N
281
N
N
N
282
N
O
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
N
N
299
S
C
N
300
N
C
N
301
N
O
N
302
N
C
N
303
N
C
N
304
N
S
N
305
N
C
N
306
N
O
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
MG
N
319
N
N
N
320
S
C
N
321
N
C
N
322
N
O
N
323
N
C
Y
324
N
C
Y
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
C
N
330
N
O
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
N
N
343
S
C
N
344
N
C
N
345
N
O
N
346
N
C
N
347
N
C
N
348
N
C
N
349
N
O
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
N
N
360
S
C
N
361
N
C
N
362
N
O
N
363
N
C
N
364
N
O
N
365
N
O
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
N
N
374
S
C
N
375
N
C
N
376
N
O
N
377
R
C
N
378
N
O
N
379
N
C
N
380
N
O
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
N
N
391
S
C
N
392
N
C
N
393
N
O
N
394
N
C
Y
395
N
C
Y
396
N
C
Y
397
N
C
Y
398
N
C
Y
399
N
C
Y
400
N
C
N
401
N
O
N
402
N
O
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
N
N
415
S
C
N
416
N
C
N
417
N
O
N
418
N
C
N
419
N
C
N
420
N
C
N
421
N
O
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
doub
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
doub
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
doub
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
doub
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
doub
N
144
N
sing
N
145
N
sing
N
146
N
doub
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
doub
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
doub
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
Y
181
N
sing
Y
182
N
sing
Y
183
N
doub
N
184
N
sing
Y
185
N
sing
Y
186
N
sing
Y
187
N
doub
N
188
N
doub
Y
189
N
sing
Y
190
N
sing
N
191
N
sing
N
192
N
sing
Y
193
N
doub
N
194
N
sing
N
195
N
sing
Y
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
doub
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
Y
208
N
sing
Y
209
N
doub
Y
210
N
doub
N
211
N
sing
Y
212
N
sing
N
213
N
sing
Y
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
doub
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
doub
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
doub
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
doub
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
doub
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
Y
316
N
doub
Y
317
N
sing
Y
318
N
sing
N
319
N
sing
Y
320
N
doub
N
321
N
sing
Y
322
N
doub
N
323
N
sing
Y
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
doub
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
doub
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
doub
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
Y
385
N
doub
Y
386
N
sing
Y
387
N
sing
N
388
N
sing
Y
389
N
doub
N
390
N
sing
Y
391
N
doub
N
392
N
sing
Y
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
doub
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
US
Biochemistry
BICHAW
0033
0006-2960
51
6114
6126
10.1021/bi300509j
22845804
Shift in the Equilibrium between On and Off States of the Allosteric Switch in Ras-GppNHp Affected by Small Molecules and Bulk Solvent Composition.
2012
10.2210/pdb3v4f/pdb
pdb_00003v4f
100
1
CCD
2011-12-05
MARRESEARCH
crystal
SINGLE WAVELENGTH
M
x-ray
1
1.0
1.0
1.0
SYNCHROTRON
APS
18876.178
GTPase HRas
1
man
polymer
40.078
CALCIUM ION
2
syn
non-polymer
24.305
MAGNESIUM ION
2
syn
non-polymer
154.251
(2R,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL
1
syn
non-polymer
522.196
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
1
syn
non-polymer
18.015
water
173
nat
water
H-Ras-1, Transforming protein p21, c-H-ras, p21ras, GTPase HRas, N-terminally processed
no
no
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDEYMRTGEGFLC
VFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLV
REIRQH
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDEYMRTGEGFLC
VFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLV
REIRQH
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
rat
sample
Hras, Hras1
10116
Rattus norvegicus
562
Escherichia coli
BL21(DE3)
plasmid
pET21
1
2.68
54.06
VAPOR DIFFUSION, HANGING DROP
7.5
20% PEG 3350 200 mM CaCl2, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
298
software
chem_comp_atom
chem_comp_bond
database_2
pdbx_struct_conn_angle
struct_conn
struct_ref_seq_dif
struct_site
repository
Initial release
Structure summary
Database references
Refinement description
Data collection
Database references
Derived calculations
1
0
2012-08-08
1
1
2012-08-15
1
2
2012-10-17
1
3
2017-11-08
1
4
2024-02-28
_software.name
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2011-12-14
REL
REL
CA
CALCIUM ION
MG
MAGNESIUM ION
DTU
(2R,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL
GNP
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
HOH
water
CA
191
2
CA
CA
191
A
MG
192
3
MG
MG
192
A
MG
194
3
MG
MG
194
A
DTU
201
4
DTU
DTU
201
A
CA
196
2
CA
CA
196
A
GNP
190
5
GNP
GNP
190
A
HOH
175
6
HOH
HOH
175
A
HOH
301
6
HOH
HOH
301
A
HOH
302
6
HOH
HOH
302
A
HOH
304
6
HOH
HOH
304
A
HOH
306
6
HOH
HOH
306
A
HOH
307
6
HOH
HOH
307
A
HOH
308
6
HOH
HOH
308
A
HOH
309
6
HOH
HOH
309
A
HOH
310
6
HOH
HOH
310
A
HOH
311
6
HOH
HOH
311
A
HOH
312
6
HOH
HOH
312
A
HOH
313
6
HOH
HOH
313
A
HOH
314
6
HOH
HOH
314
A
HOH
315
6
HOH
HOH
315
A
HOH
316
6
HOH
HOH
316
A
HOH
317
6
HOH
HOH
317
A
HOH
318
6
HOH
HOH
318
A
HOH
320
6
HOH
HOH
320
A
HOH
321
6
HOH
HOH
321
A
HOH
322
6
HOH
HOH
322
A
HOH
323
6
HOH
HOH
323
A
HOH
324
6
HOH
HOH
324
A
HOH
325
6
HOH
HOH
325
A
HOH
326
6
HOH
HOH
326
A
HOH
327
6
HOH
HOH
327
A
HOH
328
6
HOH
HOH
328
A
HOH
329
6
HOH
HOH
329
A
HOH
330
6
HOH
HOH
330
A
HOH
331
6
HOH
HOH
331
A
HOH
332
6
HOH
HOH
332
A
HOH
333
6
HOH
HOH
333
A
HOH
334
6
HOH
HOH
334
A
HOH
336
6
HOH
HOH
336
A
HOH
337
6
HOH
HOH
337
A
HOH
338
6
HOH
HOH
338
A
HOH
339
6
HOH
HOH
339
A
HOH
341
6
HOH
HOH
341
A
HOH
342
6
HOH
HOH
342
A
HOH
343
6
HOH
HOH
343
A
HOH
344
6
HOH
HOH
344
A
HOH
345
6
HOH
HOH
345
A
HOH
346
6
HOH
HOH
346
A
HOH
347
6
HOH
HOH
347
A
HOH
348
6
HOH
HOH
348
A
HOH
349
6
HOH
HOH
349
A
HOH
350
6
HOH
HOH
350
A
HOH
351
6
HOH
HOH
351
A
HOH
352
6
HOH
HOH
352
A
HOH
353
6
HOH
HOH
353
A
HOH
354
6
HOH
HOH
354
A
HOH
355
6
HOH
HOH
355
A
HOH
357
6
HOH
HOH
357
A
HOH
359
6
HOH
HOH
359
A
HOH
360
6
HOH
HOH
360
A
HOH
361
6
HOH
HOH
361
A
HOH
363
6
HOH
HOH
363
A
HOH
364
6
HOH
HOH
364
A
HOH
365
6
HOH
HOH
365
A
HOH
366
6
HOH
HOH
366
A
HOH
368
6
HOH
HOH
368
A
HOH
369
6
HOH
HOH
369
A
HOH
370
6
HOH
HOH
370
A
HOH
371
6
HOH
HOH
371
A
HOH
372
6
HOH
HOH
372
A
HOH
373
6
HOH
HOH
373
A
HOH
374
6
HOH
HOH
374
A
HOH
375
6
HOH
HOH
375
A
HOH
376
6
HOH
HOH
376
A
HOH
377
6
HOH
HOH
377
A
HOH
379
6
HOH
HOH
379
A
HOH
380
6
HOH
HOH
380
A
HOH
381
6
HOH
HOH
381
A
HOH
383
6
HOH
HOH
383
A
HOH
384
6
HOH
HOH
384
A
HOH
385
6
HOH
HOH
385
A
HOH
388
6
HOH
HOH
388
A
HOH
389
6
HOH
HOH
389
A
HOH
390
6
HOH
HOH
390
A
HOH
391
6
HOH
HOH
391
A
HOH
392
6
HOH
HOH
392
A
HOH
394
6
HOH
HOH
394
A
HOH
395
6
HOH
HOH
395
A
HOH
396
6
HOH
HOH
396
A
HOH
397
6
HOH
HOH
397
A
HOH
398
6
HOH
HOH
398
A
HOH
401
6
HOH
HOH
401
A
HOH
405
6
HOH
HOH
405
A
HOH
406
6
HOH
HOH
406
A
HOH
407
6
HOH
HOH
407
A
HOH
408
6
HOH
HOH
408
A
HOH
409
6
HOH
HOH
409
A
HOH
410
6
HOH
HOH
410
A
HOH
412
6
HOH
HOH
412
A
HOH
413
6
HOH
HOH
413
A
HOH
414
6
HOH
HOH
414
A
HOH
415
6
HOH
HOH
415
A
HOH
416
6
HOH
HOH
416
A
HOH
418
6
HOH
HOH
418
A
HOH
421
6
HOH
HOH
421
A
HOH
423
6
HOH
HOH
423
A
HOH
424
6
HOH
HOH
424
A
HOH
427
6
HOH
HOH
427
A
HOH
428
6
HOH
HOH
428
A
HOH
430
6
HOH
HOH
430
A
HOH
434
6
HOH
HOH
434
A
HOH
436
6
HOH
HOH
436
A
HOH
440
6
HOH
HOH
440
A
HOH
442
6
HOH
HOH
442
A
HOH
443
6
HOH
HOH
443
A
HOH
452
6
HOH
HOH
452
A
HOH
454
6
HOH
HOH
454
A
HOH
461
6
HOH
HOH
461
A
HOH
462
6
HOH
HOH
462
A
HOH
463
6
HOH
HOH
463
A
HOH
468
6
HOH
HOH
468
A
HOH
469
6
HOH
HOH
469
A
HOH
474
6
HOH
HOH
474
A
HOH
475
6
HOH
HOH
475
A
HOH
476
6
HOH
HOH
476
A
HOH
485
6
HOH
HOH
485
A
HOH
495
6
HOH
HOH
495
A
HOH
500
6
HOH
HOH
500
A
HOH
503
6
HOH
HOH
503
A
HOH
504
6
HOH
HOH
504
A
HOH
505
6
HOH
HOH
505
A
HOH
507
6
HOH
HOH
507
A
HOH
508
6
HOH
HOH
508
A
HOH
510
6
HOH
HOH
510
A
HOH
519
6
HOH
HOH
519
A
HOH
524
6
HOH
HOH
524
A
HOH
539
6
HOH
HOH
539
A
HOH
542
6
HOH
HOH
542
A
HOH
543
6
HOH
HOH
543
A
HOH
544
6
HOH
HOH
544
A
HOH
545
6
HOH
HOH
545
A
HOH
1471
6
HOH
HOH
1471
A
HOH
1472
6
HOH
HOH
1472
A
HOH
1473
6
HOH
HOH
1473
A
HOH
1474
6
HOH
HOH
1474
A
HOH
1475
6
HOH
HOH
1475
A
HOH
1476
6
HOH
HOH
1476
A
HOH
1477
6
HOH
HOH
1477
A
HOH
1478
6
HOH
HOH
1478
A
HOH
1479
6
HOH
HOH
1479
A
HOH
1480
6
HOH
HOH
1480
A
HOH
1481
6
HOH
HOH
1481
A
HOH
1482
6
HOH
HOH
1482
A
HOH
1483
6
HOH
HOH
1483
A
HOH
1484
6
HOH
HOH
1484
A
HOH
1485
6
HOH
HOH
1485
A
HOH
1486
6
HOH
HOH
1486
A
HOH
1487
6
HOH
HOH
1487
A
HOH
1488
6
HOH
HOH
1488
A
HOH
1489
6
HOH
HOH
1489
A
HOH
1490
6
HOH
HOH
1490
A
HOH
1491
6
HOH
HOH
1491
A
HOH
1492
6
HOH
HOH
1492
A
HOH
1493
6
HOH
HOH
1493
A
HOH
1494
6
HOH
HOH
1494
A
HOH
1495
6
HOH
HOH
1495
A
HOH
1496
6
HOH
HOH
1496
A
HOH
1497
6
HOH
HOH
1497
A
HOH
1498
6
HOH
HOH
1498
A
HOH
1499
6
HOH
HOH
1499
A
HOH
1500
6
HOH
HOH
1500
A
HOH
1501
6
HOH
HOH
1501
A
HOH
1502
6
HOH
HOH
1502
A
HOH
1503
6
HOH
HOH
1503
A
HOH
1504
6
HOH
HOH
1504
A
HOH
1505
6
HOH
HOH
1505
A
HOH
1506
6
HOH
HOH
1506
A
HOH
1507
6
HOH
HOH
1507
A
HOH
1508
6
HOH
HOH
1508
A
MET
1
n
1
MET
1
A
THR
2
n
2
THR
2
A
GLU
3
n
3
GLU
3
A
TYR
4
n
4
TYR
4
A
LYS
5
n
5
LYS
5
A
LEU
6
n
6
LEU
6
A
VAL
7
n
7
VAL
7
A
VAL
8
n
8
VAL
8
A
VAL
9
n
9
VAL
9
A
GLY
10
n
10
GLY
10
A
ALA
11
n
11
ALA
11
A
GLY
12
n
12
GLY
12
A
GLY
13
n
13
GLY
13
A
VAL
14
n
14
VAL
14
A
GLY
15
n
15
GLY
15
A
LYS
16
n
16
LYS
16
A
SER
17
n
17
SER
17
A
ALA
18
n
18
ALA
18
A
LEU
19
n
19
LEU
19
A
THR
20
n
20
THR
20
A
ILE
21
n
21
ILE
21
A
GLN
22
n
22
GLN
22
A
LEU
23
n
23
LEU
23
A
ILE
24
n
24
ILE
24
A
GLN
25
n
25
GLN
25
A
ASN
26
n
26
ASN
26
A
HIS
27
n
27
HIS
27
A
PHE
28
n
28
PHE
28
A
VAL
29
n
29
VAL
29
A
ASP
30
n
30
ASP
30
A
GLU
31
n
31
GLU
31
A
TYR
32
n
32
TYR
32
A
ASP
33
n
33
ASP
33
A
PRO
34
n
34
PRO
34
A
THR
35
n
35
THR
35
A
ILE
36
n
36
ILE
36
A
GLU
37
n
37
GLU
37
A
ASP
38
n
38
ASP
38
A
SER
39
n
39
SER
39
A
TYR
40
n
40
TYR
40
A
ARG
41
n
41
ARG
41
A
LYS
42
n
42
LYS
42
A
GLN
43
n
43
GLN
43
A
VAL
44
n
44
VAL
44
A
VAL
45
n
45
VAL
45
A
ILE
46
n
46
ILE
46
A
ASP
47
n
47
ASP
47
A
GLY
48
n
48
GLY
48
A
GLU
49
n
49
GLU
49
A
THR
50
n
50
THR
50
A
CYS
51
n
51
CYS
51
A
LEU
52
n
52
LEU
52
A
LEU
53
n
53
LEU
53
A
ASP
54
n
54
ASP
54
A
ILE
55
n
55
ILE
55
A
LEU
56
n
56
LEU
56
A
ASP
57
n
57
ASP
57
A
THR
58
n
58
THR
58
A
ALA
59
n
59
ALA
59
A
GLY
60
n
60
GLY
60
A
GLN
61
n
61
GLN
61
A
GLU
62
n
62
GLU
62
A
GLU
63
n
63
GLU
63
A
TYR
64
n
64
TYR
64
A
SER
65
n
65
SER
65
A
ALA
66
n
66
ALA
66
A
MET
67
n
67
MET
67
A
ARG
68
n
68
ARG
68
A
ASP
69
n
69
ASP
69
A
GLU
70
n
70
GLU
70
A
TYR
71
n
71
TYR
71
A
MET
72
n
72
MET
72
A
ARG
73
n
73
ARG
73
A
THR
74
n
74
THR
74
A
GLY
75
n
75
GLY
75
A
GLU
76
n
76
GLU
76
A
GLY
77
n
77
GLY
77
A
PHE
78
n
78
PHE
78
A
LEU
79
n
79
LEU
79
A
CYS
80
n
80
CYS
80
A
VAL
81
n
81
VAL
81
A
PHE
82
n
82
PHE
82
A
ALA
83
n
83
ALA
83
A
ILE
84
n
84
ILE
84
A
ASN
85
n
85
ASN
85
A
ASN
86
n
86
ASN
86
A
THR
87
n
87
THR
87
A
LYS
88
n
88
LYS
88
A
SER
89
n
89
SER
89
A
PHE
90
n
90
PHE
90
A
GLU
91
n
91
GLU
91
A
ASP
92
n
92
ASP
92
A
ILE
93
n
93
ILE
93
A
HIS
94
n
94
HIS
94
A
GLN
95
n
95
GLN
95
A
TYR
96
n
96
TYR
96
A
ARG
97
n
97
ARG
97
A
GLU
98
n
98
GLU
98
A
GLN
99
n
99
GLN
99
A
ILE
100
n
100
ILE
100
A
LYS
101
n
101
LYS
101
A
ARG
102
n
102
ARG
102
A
VAL
103
n
103
VAL
103
A
LYS
104
n
104
LYS
104
A
ASP
105
n
105
ASP
105
A
SER
106
n
106
SER
106
A
ASP
107
n
107
ASP
107
A
ASP
108
n
108
ASP
108
A
VAL
109
n
109
VAL
109
A
PRO
110
n
110
PRO
110
A
MET
111
n
111
MET
111
A
VAL
112
n
112
VAL
112
A
LEU
113
n
113
LEU
113
A
VAL
114
n
114
VAL
114
A
GLY
115
n
115
GLY
115
A
ASN
116
n
116
ASN
116
A
LYS
117
n
117
LYS
117
A
CYS
118
n
118
CYS
118
A
ASP
119
n
119
ASP
119
A
LEU
120
n
120
LEU
120
A
ALA
121
n
121
ALA
121
A
ALA
122
n
122
ALA
122
A
ARG
123
n
123
ARG
123
A
THR
124
n
124
THR
124
A
VAL
125
n
125
VAL
125
A
GLU
126
n
126
GLU
126
A
SER
127
n
127
SER
127
A
ARG
128
n
128
ARG
128
A
GLN
129
n
129
GLN
129
A
ALA
130
n
130
ALA
130
A
GLN
131
n
131
GLN
131
A
ASP
132
n
132
ASP
132
A
LEU
133
n
133
LEU
133
A
ALA
134
n
134
ALA
134
A
ARG
135
n
135
ARG
135
A
SER
136
n
136
SER
136
A
TYR
137
n
137
TYR
137
A
GLY
138
n
138
GLY
138
A
ILE
139
n
139
ILE
139
A
PRO
140
n
140
PRO
140
A
TYR
141
n
141
TYR
141
A
ILE
142
n
142
ILE
142
A
GLU
143
n
143
GLU
143
A
THR
144
n
144
THR
144
A
SER
145
n
145
SER
145
A
ALA
146
n
146
ALA
146
A
LYS
147
n
147
LYS
147
A
THR
148
n
148
THR
148
A
ARG
149
n
149
ARG
149
A
GLN
150
n
150
GLN
150
A
GLY
151
n
151
GLY
151
A
VAL
152
n
152
VAL
152
A
GLU
153
n
153
GLU
153
A
ASP
154
n
154
ASP
154
A
ALA
155
n
155
ALA
155
A
PHE
156
n
156
PHE
156
A
TYR
157
n
157
TYR
157
A
THR
158
n
158
THR
158
A
LEU
159
n
159
LEU
159
A
VAL
160
n
160
VAL
160
A
ARG
161
n
161
ARG
161
A
GLU
162
n
162
GLU
162
A
ILE
163
n
163
ILE
163
A
ARG
164
n
164
ARG
164
A
GLN
165
n
165
GLN
165
A
HIS
166
n
166
HIS
166
A
author_and_software_defined_assembly
PISA
6
hexameric
13800
-199
41260
A
SER
17
A
OG
SER
17
1_555
A
MG
192
C
MG
MG
1_555
A
THR
35
A
OG1
THR
35
1_555
82.0
A
SER
17
A
OG
SER
17
1_555
A
MG
192
C
MG
MG
1_555
A
GNP
190
G
O2G
GNP
1_555
172.7
A
THR
35
A
OG1
THR
35
1_555
A
MG
192
C
MG
MG
1_555
A
GNP
190
G
O2G
GNP
1_555
90.8
A
SER
17
A
OG
SER
17
1_555
A
MG
192
C
MG
MG
1_555
A
GNP
190
G
O2B
GNP
1_555
91.9
A
THR
35
A
OG1
THR
35
1_555
A
MG
192
C
MG
MG
1_555
A
GNP
190
G
O2B
GNP
1_555
173.9
A
GNP
190
G
O2G
GNP
1_555
A
MG
192
C
MG
MG
1_555
A
GNP
190
G
O2B
GNP
1_555
95.3
A
SER
17
A
OG
SER
17
1_555
A
MG
192
C
MG
MG
1_555
A
HOH
301
H
O
HOH
1_555
88.5
A
THR
35
A
OG1
THR
35
1_555
A
MG
192
C
MG
MG
1_555
A
HOH
301
H
O
HOH
1_555
89.0
A
GNP
190
G
O2G
GNP
1_555
A
MG
192
C
MG
MG
1_555
A
HOH
301
H
O
HOH
1_555
92.7
A
GNP
190
G
O2B
GNP
1_555
A
MG
192
C
MG
MG
1_555
A
HOH
301
H
O
HOH
1_555
90.4
A
SER
17
A
OG
SER
17
1_555
A
MG
192
C
MG
MG
1_555
A
HOH
544
H
O
HOH
1_555
86.4
A
THR
35
A
OG1
THR
35
1_555
A
MG
192
C
MG
MG
1_555
A
HOH
544
H
O
HOH
1_555
90.0
A
GNP
190
G
O2G
GNP
1_555
A
MG
192
C
MG
MG
1_555
A
HOH
544
H
O
HOH
1_555
92.3
A
GNP
190
G
O2B
GNP
1_555
A
MG
192
C
MG
MG
1_555
A
HOH
544
H
O
HOH
1_555
90.0
A
HOH
301
H
O
HOH
1_555
A
MG
192
C
MG
MG
1_555
A
HOH
544
H
O
HOH
1_555
174.9
A
PHE
28
A
O
PHE
28
1_555
A
CA
191
B
CA
CA
1_555
A
ASP
30
A
OD1
ASP
30
1_555
84.2
A
PHE
28
A
O
PHE
28
1_555
A
CA
191
B
CA
CA
1_555
A
HOH
309
H
O
HOH
1_555
88.8
A
ASP
30
A
OD1
ASP
30
1_555
A
CA
191
B
CA
CA
1_555
A
HOH
309
H
O
HOH
1_555
84.4
A
PHE
28
A
O
PHE
28
1_555
A
CA
191
B
CA
CA
1_555
A
HOH
1474
H
O
HOH
1_555
162.8
A
ASP
30
A
OD1
ASP
30
1_555
A
CA
191
B
CA
CA
1_555
A
HOH
1474
H
O
HOH
1_555
78.6
A
HOH
309
H
O
HOH
1_555
A
CA
191
B
CA
CA
1_555
A
HOH
1474
H
O
HOH
1_555
90.4
A
ARG
102
A
O
ARG
102
1_555
A
CA
196
F
CA
CA
1_555
A
ASP
105
A
OD1
ASP
105
1_555
95.4
A
ARG
102
A
O
ARG
102
1_555
A
CA
196
F
CA
CA
1_555
A
ASP
105
A
OD2
ASP
105
1_555
84.7
A
ASP
105
A
OD1
ASP
105
1_555
A
CA
196
F
CA
CA
1_555
A
ASP
105
A
OD2
ASP
105
1_555
43.9
A
HOH
342
H
O
HOH
1_555
A
MG
194
D
MG
MG
1_555
A
HOH
364
H
O
HOH
1_555
75.6
A
HOH
342
H
O
HOH
1_555
A
MG
194
D
MG
MG
1_555
A
HOH
440
H
O
HOH
1_555
126.4
A
HOH
364
H
O
HOH
1_555
A
MG
194
D
MG
MG
1_555
A
HOH
440
H
O
HOH
1_555
69.2
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-0.5000000000
-0.8660254038
0.0000000000
0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
2_675
-y+1,x-y+2,z
crystal symmetry operation
0.0000000000
153.3228695368
0.0000000000
-0.5000000000
0.8660254038
0.0000000000
-0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
3_465
-x+y-1,-x+1,z
crystal symmetry operation
-132.7815000000
76.6614347684
0.0000000000
-0.5000000000
0.8660254038
0.0000000000
0.8660254038
0.5000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
4_464
y-1,x+1,-z-1
crystal symmetry operation
-132.7815000000
76.6614347684
-134.0600000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
5_674
x-y+1,-y+2,-z-1
crystal symmetry operation
0.0000000000
153.3228695368
-134.0600000000
-0.5000000000
-0.8660254038
0.0000000000
-0.8660254038
0.5000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
6_554
-x,-x+y,-z-1
crystal symmetry operation
0.0000000000
0.0000000000
-134.0600000000
A
N
LYS
42
A
N
LYS
42
A
O
LEU
53
A
O
LEU
53
A
O
LEU
56
A
O
LEU
56
A
N
LEU
6
A
N
LEU
6
A
N
VAL
9
A
N
VAL
9
A
O
VAL
81
A
O
VAL
81
A
N
PHE
82
A
N
PHE
82
A
O
ASN
116
A
O
ASN
116
A
N
LEU
113
A
N
LEU
113
A
O
ILE
142
A
O
ILE
142
1
A
MG
194
D
MG
1
A
CA
196
F
CA
1
A
HOH
370
H
HOH
1
A
HOH
392
H
HOH
1
A
HOH
396
H
HOH
1
A
HOH
407
H
HOH
1
A
HOH
440
H
HOH
1
A
HOH
1486
H
HOH
1
A
HOH
1497
H
HOH
1
A
CG
GLU
62
A
CG
GLU
62
1
Y
1
A
CD
GLU
62
A
CD
GLU
62
1
Y
1
A
OE1
GLU
62
A
OE1
GLU
62
1
Y
1
A
OE2
GLU
62
A
OE2
GLU
62
1
Y
1
A
CG
GLU
63
A
CG
GLU
63
1
Y
1
A
CD
GLU
63
A
CD
GLU
63
1
Y
1
A
OE1
GLU
63
A
OE1
GLU
63
1
Y
1
A
OE2
GLU
63
A
OE2
GLU
63
1
Y
1
A
CG
ARG
128
A
CG
ARG
128
1
Y
1
A
CD
ARG
128
A
CD
ARG
128
1
Y
1
A
NE
ARG
128
A
NE
ARG
128
1
Y
1
A
CZ
ARG
128
A
CZ
ARG
128
1
Y
1
A
NH1
ARG
128
A
NH1
ARG
128
1
Y
1
A
NH2
ARG
128
A
NH2
ARG
128
1
Y
1
A
A
O
O
HOH
HOH
360
1481
2.11
1
A
A
O
O
GLY
HOH
138
545
2.16
1
A
A
O
O
HOH
HOH
1502
1503
2.18
1
A
ILE
36
-89.61
-85.06
1
A
LYS
117
71.28
34.47
1
A
ARG
149
79.93
-2.87
65.090
20.8433
7.780
-1.0946
0.0000
0.0000
-1.0946
0.0000
2.1892
0.1979
0.1828
0.1836
1.3910
33.2740
1999
40649
4.9200
99.6800
1.000
0.460
0.3700
1
1.340
MOLECULAR REPLACEMENT
18.2600
0.9000
1.1100
ML
FLAT BULK SOLVENT MODEL
55.8570
0.4230
1.3910
33.2740
173
1526
44
0
1309
0.007
1397
1.169
1901
0.068
214
0.005
244
14.370
530
0.3437
0.3826
1.4254
137
2634
2771
14
96.0000
0.3256
0.3121
1.4640
142
2726
2868
14
100.0000
0.2935
0.2576
1.5070
142
2755
2897
14
100.0000
0.2141
0.2084
1.5557
141
2741
2882
14
100.0000
0.1870
0.1863
1.6113
142
2749
2891
14
100.0000
0.1849
0.1799
1.6758
142
2741
2883
14
100.0000
0.2008
0.1735
1.7521
142
2742
2884
14
100.0000
0.1867
0.1649
1.8444
143
2777
2920
14
100.0000
0.1922
0.1590
1.9600
142
2752
2894
14
100.0000
0.2070
0.1732
2.1113
143
2774
2917
14
100.0000
0.1839
0.1746
2.3237
144
2769
2913
14
100.0000
0.1847
0.1812
2.6598
144
2781
2925
14
100.0000
0.1904
0.1769
3.3506
145
2807
2952
14
100.0000
0.1895
0.1743
33.2839
150
2902
3052
14
100.0000
1.390
35.000
3V4F
40675
0.063
1.878
1
14.100
10.100
99.900
0.796
1.390
1.410
1979
1.300
1
5.000
98.400
0.734
1.410
1.440
1995
1.311
1
6.200
99.800
0.648
1.440
1.470
2024
1.260
1
7.700
100.000
0.583
1.470
1.500
2013
1.218
1
9.200
100.000
0.501
1.500
1.530
2034
1.282
1
10.100
100.000
0.405
1.530
1.570
2016
1.268
1
10.700
100.000
0.338
1.570
1.600
2004
1.245
1
10.900
100.000
0.278
1.600
1.650
2020
1.334
1
11.000
100.000
0.236
1.650
1.700
2036
1.414
1
11.000
100.000
0.198
1.700
1.750
2011
1.554
1
11.100
100.000
0.157
1.750
1.810
2017
1.703
1
11.100
100.000
0.128
1.810
1.890
2055
1.811
1
11.100
100.000
0.102
1.890
1.970
2018
2.040
1
11.000
100.000
0.084
1.970
2.080
2025
2.221
1
11.000
100.000
0.072
2.080
2.210
2046
2.424
1
11.000
100.000
0.064
2.210
2.380
2036
2.674
1
10.800
100.000
0.054
2.380
2.620
2067
2.631
1
10.800
100.000
0.046
2.620
2.990
2042
2.535
1
10.700
100.000
0.040
2.990
3.770
2091
2.630
1
10.500
100.000
0.040
3.770
35.000
2146
2.767
1
9.700
99.500
data scaling
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
SCALEPACK
program
phasing
Randy J. Read
cimr-phaser@lists.cam.ac.uk
http://www-structmed.cimr.cam.ac.uk/phaser/
PHASER
program
refinement
Paul D. Adams
PDAdams@lbl.gov
C++
http://www.phenix-online.org/
PHENIX
package
1.7.1_743
data extraction
PDB
deposit@deposit.rcsb.org
June 10, 2010
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.10
data reduction
DENZO
H-Ras PEG 400/CaCl2, ordered off
1
N
N
2
N
N
3
N
N
3
N
N
4
N
N
2
N
N
5
N
N
6
N
N
A
GLY
15
A
GLY
15
HELX_P
A
ASN
26
A
ASN
26
1
1
12
A
GLN
61
A
GLN
61
HELX_P
A
SER
65
A
SER
65
5
2
5
A
MET
67
A
MET
67
HELX_P
A
ARG
73
A
ARG
73
1
3
7
A
ASN
86
A
ASN
86
HELX_P
A
ASP
92
A
ASP
92
1
4
7
A
ASP
92
A
ASP
92
HELX_P
A
ASP
105
A
ASP
105
1
5
14
A
GLU
126
A
GLU
126
HELX_P
A
GLY
138
A
GLY
138
1
6
13
A
GLY
151
A
GLY
151
HELX_P
A
ARG
164
A
ARG
164
1
7
14
metalc
2.121
A
SER
17
A
OG
SER
17
1_555
A
MG
192
C
MG
MG
1_555
metalc
2.338
A
PHE
28
A
O
PHE
28
1_555
A
CA
191
B
CA
CA
1_555
metalc
2.447
A
ASP
30
A
OD1
ASP
30
1_555
A
CA
191
B
CA
CA
1_555
metalc
2.139
A
THR
35
A
OG1
THR
35
1_555
A
MG
192
C
MG
MG
1_555
metalc
2.268
A
ARG
102
A
O
ARG
102
1_555
A
CA
196
F
CA
CA
1_555
metalc
2.684
A
ASP
105
A
OD1
ASP
105
1_555
A
CA
196
F
CA
CA
1_555
metalc
3.122
A
ASP
105
A
OD2
ASP
105
1_555
A
CA
196
F
CA
CA
1_555
metalc
2.024
A
GNP
190
G
O2G
GNP
1_555
A
MG
192
C
MG
MG
1_555
metalc
2.090
A
GNP
190
G
O2B
GNP
1_555
A
MG
192
C
MG
MG
1_555
metalc
2.443
A
CA
191
B
CA
CA
1_555
A
HOH
309
H
O
HOH
1_555
metalc
2.520
A
CA
191
B
CA
CA
1_555
A
HOH
1474
H
O
HOH
1_555
metalc
2.142
A
MG
192
C
MG
MG
1_555
A
HOH
301
H
O
HOH
1_555
metalc
2.125
A
MG
192
C
MG
MG
1_555
A
HOH
544
H
O
HOH
1_555
metalc
2.594
A
MG
194
D
MG
MG
1_555
A
HOH
342
H
O
HOH
1_555
metalc
2.414
A
MG
194
D
MG
MG
1_555
A
HOH
364
H
O
HOH
1_555
metalc
2.879
A
MG
194
D
MG
MG
1_555
A
HOH
440
H
O
HOH
1_555
SIGNALING PROTEIN
GTP-BINDING, NUCLEOTIDE BINDING, SIGNALING PROTEIN
RASH_RAT
UNP
1
1
P20171
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLC
VFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLV
REIRQH
1
166
3V4F
1
166
P20171
A
1
1
166
1
GLN
conflict
GLU
70
3V4F
A
P20171
UNP
70
70
6
anti-parallel
parallel
parallel
parallel
parallel
A
GLU
37
A
GLU
37
A
ILE
46
A
ILE
46
A
GLU
49
A
GLU
49
A
THR
58
A
THR
58
A
THR
2
A
THR
2
A
GLY
10
A
GLY
10
A
GLY
77
A
GLY
77
A
ALA
83
A
ALA
83
A
MET
111
A
MET
111
A
ASN
116
A
ASN
116
A
TYR
141
A
TYR
141
A
GLU
143
A
GLU
143
BINDING SITE FOR RESIDUE CA A 191
A
CA
191
Software
6
BINDING SITE FOR RESIDUE MG A 192
A
MG
192
Software
5
BINDING SITE FOR RESIDUE MG A 194
A
MG
194
Software
9
BINDING SITE FOR RESIDUE DTU A 201
A
DTU
201
Software
5
BINDING SITE FOR RESIDUE CA A 196
A
CA
196
Software
4
BINDING SITE FOR RESIDUE GNP A 190
A
GNP
190
Software
32
A
PHE
28
A
PHE
28
6
1_555
A
ASP
30
A
ASP
30
6
1_555
A
GLU
31
A
GLU
31
6
5_674
A
ASP
33
A
ASP
33
6
5_674
A
HOH
309
H
HOH
6
1_555
A
HOH
1474
H
HOH
6
1_555
A
SER
17
A
SER
17
5
1_555
A
THR
35
A
THR
35
5
1_555
A
GNP
190
G
GNP
5
1_555
A
HOH
301
H
HOH
5
1_555
A
HOH
544
H
HOH
5
1_555
A
HOH
342
H
HOH
9
1_555
A
HOH
342
H
HOH
9
2_665
A
HOH
342
H
HOH
9
3_565
A
HOH
364
H
HOH
9
1_555
A
HOH
364
H
HOH
9
3_565
A
HOH
364
H
HOH
9
2_665
A
HOH
440
H
HOH
9
3_565
A
HOH
440
H
HOH
9
2_665
A
HOH
440
H
HOH
9
1_555
A
ARG
68
A
ARG
68
5
1_555
A
ASP
92
A
ASP
92
5
1_555
A
GLN
95
A
GLN
95
5
1_555
A
TYR
96
A
TYR
96
5
1_555
A
GLN
99
A
GLN
99
5
1_555
A
ARG
102
A
ARG
102
4
6_554
A
ARG
102
A
ARG
102
4
1_555
A
ASP
105
A
ASP
105
4
6_554
A
ASP
105
A
ASP
105
4
1_555
A
GLY
12
A
GLY
12
32
1_555
A
GLY
13
A
GLY
13
32
1_555
A
VAL
14
A
VAL
14
32
1_555
A
GLY
15
A
GLY
15
32
1_555
A
LYS
16
A
LYS
16
32
1_555
A
SER
17
A
SER
17
32
1_555
A
ALA
18
A
ALA
18
32
1_555
A
PHE
28
A
PHE
28
32
1_555
A
VAL
29
A
VAL
29
32
1_555
A
ASP
30
A
ASP
30
32
1_555
A
GLU
31
A
GLU
31
32
1_555
A
TYR
32
A
TYR
32
32
1_555
A
PRO
34
A
PRO
34
32
1_555
A
THR
35
A
THR
35
32
1_555
A
GLY
60
A
GLY
60
32
1_555
A
GLN
61
A
GLN
61
32
1_555
A
ASN
116
A
ASN
116
32
1_555
A
LYS
117
A
LYS
117
32
1_555
A
ASP
119
A
ASP
119
32
1_555
A
LEU
120
A
LEU
120
32
1_555
A
SER
145
A
SER
145
32
1_555
A
ALA
146
A
ALA
146
32
1_555
A
LYS
147
A
LYS
147
32
1_555
A
HOH
175
H
HOH
32
1_555
A
MG
192
C
MG
32
1_555
A
HOH
301
H
HOH
32
1_555
A
HOH
304
H
HOH
32
1_555
A
HOH
327
H
HOH
32
1_555
A
HOH
334
H
HOH
32
1_555
A
HOH
390
H
HOH
32
1_555
A
HOH
428
H
HOH
32
1_555
A
HOH
544
H
HOH
32
1_555
155
H 3 2