0.032073
0.000000
0.002682
0.000000
0.016593
0.000000
0.000000
0.000000
0.026338
0.00000
0.00000
0.00000
Caro, J.A.
Nam, S.P.
Heroux, A.
Schlessman, J.L.
Garcia-Moreno, E.B.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
2
90.00
94.78
90.00
31.179
60.266
38.100
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Ca 2
40.078
CALCIUM ION
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C10 H16 N2 O11 P2
402.188
THYMIDINE-3',5'-DIPHOSPHATE
DNA linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
CA
N
75
N
N
N
76
S
C
N
77
N
C
N
78
N
O
N
79
N
C
N
80
N
C
N
81
N
C
N
82
N
O
N
83
N
N
N
84
N
O
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
N
N
96
S
C
N
97
N
C
N
98
N
O
N
99
N
C
N
100
N
C
N
101
N
C
N
102
N
O
N
103
N
O
N
104
N
O
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
N
N
115
N
C
N
116
N
C
N
117
N
O
N
118
N
O
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
N
N
125
S
C
N
126
N
C
N
127
N
O
N
128
N
C
Y
129
N
C
Y
130
N
N
Y
131
N
C
Y
132
N
C
Y
133
N
N
N
134
N
O
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
O
N
146
N
H
N
147
N
H
N
148
N
N
N
149
S
C
N
150
N
C
N
151
N
O
N
152
S
C
N
153
N
C
N
154
N
C
N
155
N
C
N
156
N
O
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
N
N
171
S
C
N
172
N
C
N
173
N
O
N
174
N
C
N
175
N
C
N
176
N
C
N
177
N
C
N
178
N
O
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
N
N
193
S
C
N
194
N
C
N
195
N
O
N
196
N
C
N
197
N
C
N
198
N
C
N
199
N
C
N
200
N
N
N
201
N
O
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
N
N
218
S
C
N
219
N
C
N
220
N
O
N
221
N
C
N
222
N
C
N
223
N
S
N
224
N
C
N
225
N
O
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
N
N
238
S
C
N
239
N
C
N
240
N
O
N
241
N
C
Y
242
N
C
Y
243
N
C
Y
244
N
C
Y
245
N
C
Y
246
N
C
Y
247
N
C
N
248
N
O
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
N
N
261
S
C
N
262
N
C
N
263
N
O
N
264
N
C
N
265
N
C
N
266
N
C
N
267
N
O
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
N
N
278
S
C
N
279
N
C
N
280
N
O
N
281
N
C
N
282
N
O
N
283
N
O
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
P
N
292
N
O
N
293
N
O
N
294
N
O
N
295
N
P
N
296
N
O
N
297
N
O
N
298
N
O
N
299
N
O
N
300
N
C
N
301
R
C
N
302
N
O
N
303
S
C
N
304
N
O
N
305
N
C
N
306
R
C
N
307
N
N
N
308
N
C
N
309
N
O
N
310
N
N
N
311
N
C
N
312
N
O
N
313
N
C
N
314
N
C
N
315
N
C
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
N
N
333
S
C
N
334
N
C
N
335
N
O
N
336
R
C
N
337
N
O
N
338
N
C
N
339
N
O
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
N
N
350
S
C
N
351
N
C
N
352
N
O
N
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
N
Y
358
N
C
Y
359
N
C
Y
360
N
C
Y
361
N
C
Y
362
N
C
N
363
N
O
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
N
N
377
S
C
N
378
N
C
N
379
N
O
N
380
N
C
Y
381
N
C
Y
382
N
C
Y
383
N
C
Y
384
N
C
Y
385
N
C
Y
386
N
C
N
387
N
O
N
388
N
O
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
N
N
401
S
C
N
402
N
C
N
403
N
O
N
404
N
C
N
405
N
C
N
406
N
C
N
407
N
O
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
doub
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
Y
127
N
sing
Y
128
N
doub
Y
129
N
doub
N
130
N
sing
Y
131
N
sing
N
132
N
sing
Y
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
doub
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
doub
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
doub
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
doub
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
Y
235
N
doub
Y
236
N
sing
Y
237
N
sing
N
238
N
sing
Y
239
N
doub
N
240
N
sing
Y
241
N
doub
N
242
N
sing
Y
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
doub
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
doub
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
doub
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
doub
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
doub
N
312
N
sing
N
313
N
sing
N
314
N
doub
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
doub
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
doub
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
Y
346
N
doub
Y
347
N
sing
Y
348
N
sing
N
349
N
sing
Y
350
N
doub
Y
351
N
sing
Y
352
N
sing
N
353
N
sing
Y
354
N
sing
Y
355
N
doub
N
356
N
sing
Y
357
N
doub
N
358
N
sing
Y
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
doub
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
Y
374
N
doub
Y
375
N
sing
Y
376
N
sing
N
377
N
sing
Y
378
N
doub
N
379
N
sing
Y
380
N
doub
N
381
N
sing
Y
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
doub
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
To be Published
0353
Pressure effects in proteins.
10.2210/pdb3va5/pdb
pdb_00003va5
100
1
PIXEL
2011-09-25
PSI PILATUS 6M
SINGLE WAVELENGTH
M
x-ray
1
0.97950
1.0
X25
NSLS
0.97950
SYNCHROTRON
NSLS BEAMLINE X25
16073.330
Thermonuclease
3.1.31.1
unp residues 83-231
V102A, G50F,V51N,I92A,L103A,P117G,H124L,S128A, del(44-49)
1
man
polymer
40.078
CALCIUM ION
1
syn
non-polymer
402.188
THYMIDINE-3',5'-DIPHOSPHATE
1
syn
non-polymer
18.015
water
111
nat
water
TNase, Micrococcal nuclease, Staphylococcal nuclease
no
no
ATSTKKLHKEPATLIKAIDGDTAKLMYKGQPMTFRLLLVDTPEFNEKYGPEASAFTKKMVENAKKIEVEFDKGQRTDKYG
RGLAYAYADGKMVNEALVRQGLAKVAYVYKGNNTHEQLLRKAEAQAKKEKLNIWSEDNADSGQ
ATSTKKLHKEPATLIKAIDGDTAKLMYKGQPMTFRLLLVDTPEFNEKYGPEASAFTKKMVENAKKIEVEFDKGQRTDKYG
RGLAYAYADGKMVNEALVRQGLAKVAYVYKGNNTHEQLLRKAEAQAKKEKLNIWSEDNADSGQ
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
nuc
1280
Staphylococcus aureus
469008
Escherichia coli
BL21(DE3)
plasmid
pET24a+
1
2.22
44.58
VAPOR DIFFUSION, HANGING DROP
7.0
20% MPD, 25 mM Potassium Phosphate, Calcium Chloride, pdTp, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
277
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_struct_conn_angle
struct_conn
struct_ref_seq_dif
struct_site
repository
Initial release
Data collection
Database references
Derived calculations
Refinement description
1
0
2012-01-25
1
1
2023-09-13
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_seq_id
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Crystal structure of Staphylococcal nuclease variant Delta+PHS
Crystal structure of Staphylococcal nuclease variant Delta+PHS I92A
Crystal structure of Staphylococcal nuclease variant Delta+PHS V23A
Crystal structure of Staphylococcal nuclease variant Delta+PHS I92A/V66A
Crystal structure of Staphylococcal nuclease variant Delta+PHS I92A/L103A
RCSB
Y
RCSB
2011-12-28
REL
REL
CA
CALCIUM ION
THP
THYMIDINE-3',5'-DIPHOSPHATE
HOH
water
3BDC
pdb entry 3BDC
PDB
experimental model
CA
1
2
CA
CA
201
A
THP
1
3
THP
THP
202
A
HOH
44
4
HOH
HOH
301
A
HOH
45
4
HOH
HOH
302
A
HOH
46
4
HOH
HOH
303
A
HOH
47
4
HOH
HOH
304
A
HOH
48
4
HOH
HOH
305
A
HOH
49
4
HOH
HOH
306
A
HOH
1
4
HOH
HOH
307
A
HOH
2
4
HOH
HOH
308
A
HOH
3
4
HOH
HOH
309
A
HOH
4
4
HOH
HOH
310
A
HOH
5
4
HOH
HOH
311
A
HOH
6
4
HOH
HOH
312
A
HOH
7
4
HOH
HOH
313
A
HOH
8
4
HOH
HOH
314
A
HOH
9
4
HOH
HOH
315
A
HOH
10
4
HOH
HOH
316
A
HOH
11
4
HOH
HOH
317
A
HOH
12
4
HOH
HOH
318
A
HOH
13
4
HOH
HOH
319
A
HOH
14
4
HOH
HOH
320
A
HOH
15
4
HOH
HOH
321
A
HOH
16
4
HOH
HOH
322
A
HOH
17
4
HOH
HOH
323
A
HOH
18
4
HOH
HOH
324
A
HOH
19
4
HOH
HOH
325
A
HOH
20
4
HOH
HOH
326
A
HOH
21
4
HOH
HOH
327
A
HOH
22
4
HOH
HOH
328
A
HOH
23
4
HOH
HOH
329
A
HOH
24
4
HOH
HOH
330
A
HOH
25
4
HOH
HOH
331
A
HOH
26
4
HOH
HOH
332
A
HOH
27
4
HOH
HOH
333
A
HOH
28
4
HOH
HOH
334
A
HOH
29
4
HOH
HOH
335
A
HOH
30
4
HOH
HOH
336
A
HOH
31
4
HOH
HOH
337
A
HOH
32
4
HOH
HOH
338
A
HOH
33
4
HOH
HOH
339
A
HOH
34
4
HOH
HOH
340
A
HOH
35
4
HOH
HOH
341
A
HOH
36
4
HOH
HOH
342
A
HOH
37
4
HOH
HOH
343
A
HOH
38
4
HOH
HOH
344
A
HOH
39
4
HOH
HOH
345
A
HOH
40
4
HOH
HOH
346
A
HOH
41
4
HOH
HOH
347
A
HOH
42
4
HOH
HOH
348
A
HOH
43
4
HOH
HOH
349
A
HOH
51
4
HOH
HOH
350
A
HOH
52
4
HOH
HOH
351
A
HOH
53
4
HOH
HOH
352
A
HOH
54
4
HOH
HOH
353
A
HOH
55
4
HOH
HOH
354
A
HOH
56
4
HOH
HOH
355
A
HOH
57
4
HOH
HOH
356
A
HOH
58
4
HOH
HOH
357
A
HOH
59
4
HOH
HOH
358
A
HOH
60
4
HOH
HOH
359
A
HOH
61
4
HOH
HOH
360
A
HOH
62
4
HOH
HOH
361
A
HOH
63
4
HOH
HOH
362
A
HOH
64
4
HOH
HOH
363
A
HOH
65
4
HOH
HOH
364
A
HOH
66
4
HOH
HOH
365
A
HOH
67
4
HOH
HOH
366
A
HOH
68
4
HOH
HOH
367
A
HOH
69
4
HOH
HOH
368
A
HOH
70
4
HOH
HOH
369
A
HOH
71
4
HOH
HOH
370
A
HOH
72
4
HOH
HOH
371
A
HOH
73
4
HOH
HOH
372
A
HOH
74
4
HOH
HOH
373
A
HOH
75
4
HOH
HOH
374
A
HOH
76
4
HOH
HOH
375
A
HOH
77
4
HOH
HOH
376
A
HOH
78
4
HOH
HOH
377
A
HOH
79
4
HOH
HOH
378
A
HOH
80
4
HOH
HOH
379
A
HOH
81
4
HOH
HOH
380
A
HOH
82
4
HOH
HOH
381
A
HOH
83
4
HOH
HOH
382
A
HOH
85
4
HOH
HOH
383
A
HOH
86
4
HOH
HOH
384
A
HOH
87
4
HOH
HOH
385
A
HOH
88
4
HOH
HOH
386
A
HOH
89
4
HOH
HOH
387
A
HOH
90
4
HOH
HOH
388
A
HOH
91
4
HOH
HOH
389
A
HOH
92
4
HOH
HOH
390
A
HOH
93
4
HOH
HOH
391
A
HOH
94
4
HOH
HOH
392
A
HOH
95
4
HOH
HOH
393
A
HOH
96
4
HOH
HOH
394
A
HOH
97
4
HOH
HOH
395
A
HOH
98
4
HOH
HOH
396
A
HOH
99
4
HOH
HOH
397
A
HOH
100
4
HOH
HOH
398
A
HOH
101
4
HOH
HOH
399
A
HOH
102
4
HOH
HOH
400
A
HOH
103
4
HOH
HOH
401
A
HOH
104
4
HOH
HOH
402
A
HOH
105
4
HOH
HOH
403
A
HOH
106
4
HOH
HOH
404
A
HOH
107
4
HOH
HOH
405
A
HOH
108
4
HOH
HOH
406
A
HOH
109
4
HOH
HOH
407
A
HOH
110
4
HOH
HOH
408
A
HOH
111
4
HOH
HOH
409
A
HOH
112
4
HOH
HOH
410
A
HOH
113
4
HOH
HOH
411
A
2.500
2.500
32.120
32.120
Phaser MODE: MR_AUTO
n
1
1
A
n
2
2
A
n
3
3
A
n
4
4
A
n
5
5
A
n
6
6
A
LEU
7
n
7
LEU
7
A
HIS
8
n
8
HIS
8
A
LYS
9
n
9
LYS
9
A
GLU
10
n
10
GLU
10
A
PRO
11
n
11
PRO
11
A
ALA
12
n
12
ALA
12
A
THR
13
n
13
THR
13
A
LEU
14
n
14
LEU
14
A
ILE
15
n
15
ILE
15
A
LYS
16
n
16
LYS
16
A
ALA
17
n
17
ALA
17
A
ILE
18
n
18
ILE
18
A
ASP
19
n
19
ASP
19
A
GLY
20
n
20
GLY
20
A
ASP
21
n
21
ASP
21
A
THR
22
n
22
THR
22
A
ALA
23
n
23
ALA
23
A
LYS
24
n
24
LYS
24
A
LEU
25
n
25
LEU
25
A
MET
26
n
26
MET
26
A
TYR
27
n
27
TYR
27
A
LYS
28
n
28
LYS
28
A
GLY
29
n
29
GLY
29
A
GLN
30
n
30
GLN
30
A
PRO
31
n
31
PRO
31
A
MET
32
n
32
MET
32
A
THR
33
n
33
THR
33
A
PHE
34
n
34
PHE
34
A
ARG
35
n
35
ARG
35
A
LEU
36
n
36
LEU
36
A
LEU
37
n
37
LEU
37
A
LEU
38
n
38
LEU
38
A
VAL
39
n
39
VAL
39
A
ASP
40
n
40
ASP
40
A
THR
41
n
41
THR
41
A
PRO
42
n
42
PRO
42
A
GLU
43
n
43
GLU
43
A
PHE
50
n
44
PHE
50
A
ASN
51
n
45
ASN
51
A
GLU
52
n
46
GLU
52
A
LYS
53
n
47
LYS
53
A
TYR
54
n
48
TYR
54
A
GLY
55
n
49
GLY
55
A
PRO
56
n
50
PRO
56
A
GLU
57
n
51
GLU
57
A
ALA
58
n
52
ALA
58
A
SER
59
n
53
SER
59
A
ALA
60
n
54
ALA
60
A
PHE
61
n
55
PHE
61
A
THR
62
n
56
THR
62
A
LYS
63
n
57
LYS
63
A
LYS
64
n
58
LYS
64
A
MET
65
n
59
MET
65
A
VAL
66
n
60
VAL
66
A
GLU
67
n
61
GLU
67
A
ASN
68
n
62
ASN
68
A
ALA
69
n
63
ALA
69
A
LYS
70
n
64
LYS
70
A
LYS
71
n
65
LYS
71
A
ILE
72
n
66
ILE
72
A
GLU
73
n
67
GLU
73
A
VAL
74
n
68
VAL
74
A
GLU
75
n
69
GLU
75
A
PHE
76
n
70
PHE
76
A
ASP
77
n
71
ASP
77
A
LYS
78
n
72
LYS
78
A
GLY
79
n
73
GLY
79
A
GLN
80
n
74
GLN
80
A
ARG
81
n
75
ARG
81
A
THR
82
n
76
THR
82
A
ASP
83
n
77
ASP
83
A
LYS
84
n
78
LYS
84
A
TYR
85
n
79
TYR
85
A
GLY
86
n
80
GLY
86
A
ARG
87
n
81
ARG
87
A
GLY
88
n
82
GLY
88
A
LEU
89
n
83
LEU
89
A
ALA
90
n
84
ALA
90
A
TYR
91
n
85
TYR
91
A
ALA
92
n
86
ALA
92
A
TYR
93
n
87
TYR
93
A
ALA
94
n
88
ALA
94
A
ASP
95
n
89
ASP
95
A
GLY
96
n
90
GLY
96
A
LYS
97
n
91
LYS
97
A
MET
98
n
92
MET
98
A
VAL
99
n
93
VAL
99
A
ASN
100
n
94
ASN
100
A
GLU
101
n
95
GLU
101
A
ALA
102
n
96
ALA
102
A
LEU
103
n
97
LEU
103
A
VAL
104
n
98
VAL
104
A
ARG
105
n
99
ARG
105
A
GLN
106
n
100
GLN
106
A
GLY
107
n
101
GLY
107
A
LEU
108
n
102
LEU
108
A
ALA
109
n
103
ALA
109
A
LYS
110
n
104
LYS
110
A
VAL
111
n
105
VAL
111
A
ALA
112
n
106
ALA
112
A
TYR
113
n
107
TYR
113
A
VAL
114
n
108
VAL
114
A
TYR
115
n
109
TYR
115
A
LYS
116
n
110
LYS
116
A
GLY
117
n
111
GLY
117
A
ASN
118
n
112
ASN
118
A
ASN
119
n
113
ASN
119
A
THR
120
n
114
THR
120
A
HIS
121
n
115
HIS
121
A
GLU
122
n
116
GLU
122
A
GLN
123
n
117
GLN
123
A
LEU
124
n
118
LEU
124
A
LEU
125
n
119
LEU
125
A
ARG
126
n
120
ARG
126
A
LYS
127
n
121
LYS
127
A
ALA
128
n
122
ALA
128
A
GLU
129
n
123
GLU
129
A
ALA
130
n
124
ALA
130
A
GLN
131
n
125
GLN
131
A
ALA
132
n
126
ALA
132
A
LYS
133
n
127
LYS
133
A
LYS
134
n
128
LYS
134
A
GLU
135
n
129
GLU
135
A
LYS
136
n
130
LYS
136
A
LEU
137
n
131
LEU
137
A
ASN
138
n
132
ASN
138
A
ILE
139
n
133
ILE
139
A
TRP
140
n
134
TRP
140
A
SER
141
n
135
SER
141
A
n
136
142
A
n
137
143
A
n
138
144
A
n
139
145
A
n
140
146
A
n
141
147
A
n
142
148
A
n
143
149
A
2.4602
-0.4666
0.2366
3.5442
0.7762
0.7701
-0.0411
-0.0144
-0.2611
0.1228
0.0878
0.0045
0.0793
0.1138
-0.0467
0.0918
0.0040
0.0275
0.1095
0.0145
0.1182
refined
12.2385
30.2644
3.3411
X-RAY DIFFRACTION
1.6303
-1.9395
-0.4921
5.6712
1.5249
0.4146
0.0626
0.0504
-0.1022
-0.0335
-0.0329
-0.1998
-0.0037
-0.0192
-0.0297
0.0919
0.0149
0.0315
0.1007
-0.0096
0.1587
refined
17.1733
28.7767
0.0401
X-RAY DIFFRACTION
2.0312
0.0270
-0.3018
2.6280
-0.0770
0.7956
-0.0474
-0.4080
0.1024
0.4289
0.0657
-0.0621
0.1317
0.0774
-0.0183
0.1470
0.0197
0.0004
0.1550
-0.0060
0.0533
refined
11.2868
39.1729
13.5706
X-RAY DIFFRACTION
2.3838
-0.5993
0.1944
5.9902
-1.1554
2.6548
0.0254
0.1626
-0.2670
-0.0914
-0.1143
0.1971
-0.0015
-0.0089
0.0889
0.1240
-0.0048
0.0147
0.1337
-0.0155
0.1578
refined
7.6672
31.1934
-2.1029
X-RAY DIFFRACTION
2.8103
0.0310
-0.0161
2.5773
0.0791
0.4742
-0.0593
0.1982
-0.1007
-0.0824
0.0541
0.0051
0.0954
0.0120
0.0052
0.1259
-0.0049
0.0141
0.1344
-0.0033
0.1337
refined
12.3184
35.6623
-0.2038
X-RAY DIFFRACTION
2.7216
-0.1810
0.1803
2.3868
0.2231
0.7882
-0.0167
0.0486
0.1463
-0.0503
0.0314
0.2120
-0.0455
-0.0791
-0.0147
0.0990
0.0032
0.0083
0.1174
0.0041
0.1357
refined
4.3522
43.5153
2.5566
X-RAY DIFFRACTION
3.9268
-0.2487
1.1597
3.7290
0.3239
5.0997
-0.1337
-0.4280
0.3720
0.4264
0.0899
0.2932
-0.2386
-0.2611
0.0438
0.0845
0.0264
0.0547
0.0971
-0.0454
0.1215
refined
-0.8053
48.6220
11.9102
X-RAY DIFFRACTION
A
7
A
24
X-RAY DIFFRACTION
1
A
25
A
35
X-RAY DIFFRACTION
2
A
36
A
69
X-RAY DIFFRACTION
3
A
70
A
80
X-RAY DIFFRACTION
4
A
81
A
97
X-RAY DIFFRACTION
5
A
98
A
124
X-RAY DIFFRACTION
6
A
125
A
141
X-RAY DIFFRACTION
7
author_and_software_defined_assembly
PISA
1
monomeric
A
ASP
21
A
OD2
ASP
21
1_555
A
CA
201
B
CA
CA
1_555
A
ASP
40
A
OD1
ASP
40
1_555
85.0
A
ASP
21
A
OD2
ASP
21
1_555
A
CA
201
B
CA
CA
1_555
A
THR
41
A
O
THR
41
1_555
88.4
A
ASP
40
A
OD1
ASP
40
1_555
A
CA
201
B
CA
CA
1_555
A
THR
41
A
O
THR
41
1_555
76.6
A
ASP
21
A
OD2
ASP
21
1_555
A
CA
201
B
CA
CA
1_555
A
GLU
43
A
OE2
GLU
43
1_555
151.0
A
ASP
40
A
OD1
ASP
40
1_555
A
CA
201
B
CA
CA
1_555
A
GLU
43
A
OE2
GLU
43
1_555
123.5
A
THR
41
A
O
THR
41
1_555
A
CA
201
B
CA
CA
1_555
A
GLU
43
A
OE2
GLU
43
1_555
102.3
A
ASP
21
A
OD2
ASP
21
1_555
A
CA
201
B
CA
CA
1_555
A
THP
202
C
O4P
THP
1_555
96.1
A
ASP
40
A
OD1
ASP
40
1_555
A
CA
201
B
CA
CA
1_555
A
THP
202
C
O4P
THP
1_555
69.1
A
THR
41
A
O
THR
41
1_555
A
CA
201
B
CA
CA
1_555
A
THP
202
C
O4P
THP
1_555
144.8
A
GLU
43
A
OE2
GLU
43
1_555
A
CA
201
B
CA
CA
1_555
A
THP
202
C
O4P
THP
1_555
90.5
A
ASP
21
A
OD2
ASP
21
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
307
D
O
HOH
1_555
76.1
A
ASP
40
A
OD1
ASP
40
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
307
D
O
HOH
1_555
138.8
A
THR
41
A
O
THR
41
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
307
D
O
HOH
1_555
137.6
A
GLU
43
A
OE2
GLU
43
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
307
D
O
HOH
1_555
78.0
A
THP
202
C
O4P
THP
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
307
D
O
HOH
1_555
76.9
A
ASP
21
A
OD2
ASP
21
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
314
D
O
HOH
1_555
81.8
A
ASP
40
A
OD1
ASP
40
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
314
D
O
HOH
1_555
139.8
A
THR
41
A
O
THR
41
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
314
D
O
HOH
1_555
65.3
A
GLU
43
A
OE2
GLU
43
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
314
D
O
HOH
1_555
78.5
A
THP
202
C
O4P
THP
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
314
D
O
HOH
1_555
149.9
A
HOH
307
D
O
HOH
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
314
D
O
HOH
1_555
73.5
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
LYS
97
A
O
LYS
91
A
N
ALA
94
A
N
ALA
88
A
O
TYR
93
A
O
TYR
87
A
N
GLU
73
A
N
GLU
67
A
O
VAL
74
A
O
VAL
68
A
N
GLU
10
A
N
GLU
10
A
N
LYS
16
A
N
LYS
16
A
O
LYS
24
A
O
LYS
24
A
N
ALA
23
A
N
ALA
23
A
O
PHE
34
A
O
PHE
34
A
N
ARG
35
A
N
ARG
35
A
O
GLY
88
A
O
GLY
82
A
N
ASP
40
A
N
ASP
40
A
O
LYS
110
A
O
LYS
104
1
A
ALA
1
A
ALA
1
1
Y
1
A
THR
2
A
THR
2
1
Y
1
A
SER
3
A
SER
3
1
Y
1
A
THR
4
A
THR
4
1
Y
1
A
LYS
5
A
LYS
5
1
Y
1
A
LYS
6
A
LYS
6
1
Y
1
A
GLU
142
A
GLU
136
1
Y
1
A
ASP
143
A
ASP
137
1
Y
1
A
ASN
144
A
ASN
138
1
Y
1
A
ALA
145
A
ALA
139
1
Y
1
A
ASP
146
A
ASP
140
1
Y
1
A
SER
147
A
SER
141
1
Y
1
A
GLY
148
A
GLY
142
1
Y
1
A
GLN
149
A
GLN
143
1
Y
1
A
ILE
18
-120.27
-67.34
1
A
TYR
54
72.30
-1.57
1
A
ASN
138
48.40
-108.48
63.630
26.3955
13.960
-1.5700
0.0000
1.0100
-1.0100
0.0000
2.7500
0.9700
0.9520
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : WITH TLS ADDED
0.2185
0.1751
0.1793
0.1793
1.5500
32.1200
2046
20146
20146
10.2000
98.5900
0.2249
0.1814
1.000
0.300
0.8523
3.2340
0.0580
0.0851
0.0910
RANDOM
1
THROUGHOUT
0.000
0
MOLECULAR REPLACEMENT
0.0850
0.0910
0.8000
0.8000
1.4000
pdb entry 3BDC
MAXIMUM LIKELIHOOD
MASK
1.5500
32.1200
111
1165
26
0
1028
0.017
0.022
1118
1.719
1.999
1513
6.134
5.000
141
33.985
25.000
50
14.577
15.000
220
10.054
15.000
5
0.162
0.200
162
0.016
0.021
819
1.459
1.500
659
2.163
2.000
1058
3.222
3.000
459
4.917
4.500
448
0.2850
0.3110
1.5900
138
1208
1346
1346
20
89.9700
32.3
1.550
50.000
3VA5
20327
20327
0
0
0.066
2.070
1
11.600
5.800
98.200
0.336
1.550
1.580
3.5
865
0.952
1
4.200
85.900
0.301
1.580
1.610
943
1.022
1
4.500
91.300
0.265
1.610
1.640
986
1.089
1
5.000
95.500
0.255
1.640
1.670
1018
1.185
1
5.500
98.500
0.242
1.670
1.710
1023
1.178
1
5.900
99.400
0.228
1.710
1.750
1032
1.190
1
6.000
100.000
0.196
1.750
1.790
1007
1.448
1
5.800
100.000
0.165
1.790
1.840
1073
1.458
1
6.200
100.000
0.155
1.840
1.890
999
1.707
1
6.000
99.700
0.126
1.890
1.950
1027
1.858
1
6.100
99.800
0.117
1.950
2.020
1048
2.032
1
6.200
100.000
0.096
2.020
2.100
1014
2.316
1
5.900
99.700
0.090
2.100
2.200
1029
2.413
1
5.900
99.500
0.080
2.200
2.320
1022
2.393
1
5.900
99.300
0.075
2.320
2.460
1034
2.537
1
6.300
99.500
0.065
2.460
2.650
1046
2.572
1
6.000
99.700
0.063
2.650
2.920
1029
2.846
1
6.000
99.900
0.056
2.920
3.340
1038
3.150
1
6.000
99.100
0.052
3.340
4.210
1037
3.290
1
5.700
98.800
0.058
4.210
50.000
1057
3.637
1
5.800
98.300
data scaling
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
SCALEPACK
program
phasing
Randy J. Read
cimr-phaser@lists.cam.ac.uk
Tue Aug 24 18:17:37 2010
http://www-structmed.cimr.cam.ac.uk/phaser/
PHASER
program
2.2.1
refinement
Garib N. Murshudov
garib@ysbl.york.ac.uk
Fortran_77
http://www.ccp4.ac.uk/dist/html/refmac5.html
REFMAC
program
data extraction
PDB
deposit@deposit.rcsb.org
June 10, 2010
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.10
data reduction
HKL-2000
Crystal structure of Staphylococcal nuclease variant Delta+PHS I92A/V23A at cryogenic temperature
1
N
N
2
N
N
3
N
N
4
N
N
A
TYR
54
A
TYR
48
HELX_P
A
ALA
69
A
ALA
63
1
1
16
A
VAL
99
A
VAL
93
HELX_P
A
GLN
106
A
GLN
100
1
2
8
A
HIS
121
A
HIS
115
HELX_P
A
GLU
135
A
GLU
129
1
3
15
A
LEU
137
A
LEU
131
HELX_P
A
SER
141
A
SER
135
5
4
5
metalc
2.805
A
ASP
21
A
OD2
ASP
21
1_555
A
CA
201
B
CA
CA
1_555
metalc
2.732
A
ASP
40
A
OD1
ASP
40
1_555
A
CA
201
B
CA
CA
1_555
metalc
2.818
A
THR
41
A
O
THR
41
1_555
A
CA
201
B
CA
CA
1_555
metalc
3.032
A
GLU
43
A
OE2
GLU
43
1_555
A
CA
201
B
CA
CA
1_555
metalc
3.164
A
CA
201
B
CA
CA
1_555
A
THP
202
C
O4P
THP
1_555
metalc
2.857
A
CA
201
B
CA
CA
1_555
A
HOH
307
D
O
HOH
1_555
metalc
2.932
A
CA
201
B
CA
CA
1_555
A
HOH
314
D
O
HOH
1_555
HYDROLASE
Staphylococcal nuclease, hyperstable variant, hydrolase, pdtp, pressure, cavity
NUC_STAAU
UNP
1
83
P00644
ATSTKKLHKEPATLIKAIDGDTVKLMYKGQPMTFRLLLVDTPETKHPKKGVEKYGPEASAFTKKMVENAKKIEVEFDKGQ
RTDKYGRGLAYIYADGKMVNEALVRQGLAKVAYVYKPNNTHEQHLRKSEAQAKKEKLNIWSEDNADSGQ
83
231
3VA5
1
149
P00644
A
1
1
143
1
VAL
engineered mutation
ALA
23
3VA5
A
P00644
UNP
105
23
1
THR
deletion
3VA5
A
P00644
UNP
126
1
LYS
deletion
3VA5
A
P00644
UNP
127
1
HIS
deletion
3VA5
A
P00644
UNP
128
1
PRO
deletion
3VA5
A
P00644
UNP
129
1
LYS
deletion
3VA5
A
P00644
UNP
130
1
LYS
deletion
3VA5
A
P00644
UNP
131
1
GLY
engineered mutation
PHE
50
3VA5
A
P00644
UNP
132
44
1
VAL
engineered mutation
ASN
51
3VA5
A
P00644
UNP
133
45
1
ILE
engineered mutation
ALA
92
3VA5
A
P00644
UNP
174
86
1
PRO
engineered mutation
GLY
117
3VA5
A
P00644
UNP
199
111
1
HIS
engineered mutation
LEU
124
3VA5
A
P00644
UNP
206
118
1
SER
engineered mutation
ALA
128
3VA5
A
P00644
UNP
210
122
7
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
A
LYS
97
A
LYS
91
A
MET
98
A
MET
92
A
GLY
88
A
GLY
82
A
ALA
94
A
ALA
88
A
ILE
72
A
ILE
66
A
GLU
75
A
GLU
69
A
LYS
9
A
LYS
9
A
ASP
19
A
ASP
19
A
THR
22
A
THR
22
A
TYR
27
A
TYR
27
A
GLN
30
A
GLN
30
A
LEU
36
A
LEU
36
A
GLY
88
A
GLY
82
A
ALA
94
A
ALA
88
A
VAL
39
A
VAL
39
A
ASP
40
A
ASP
40
A
LYS
110
A
LYS
104
A
VAL
111
A
VAL
105
BINDING SITE FOR RESIDUE CA A 201
A
CA
201
Software
7
BINDING SITE FOR RESIDUE THP A 202
A
THP
202
Software
22
A
ASP
21
A
ASP
21
7
1_555
A
ASP
40
A
ASP
40
7
1_555
A
THR
41
A
THR
41
7
1_555
A
GLU
43
A
GLU
43
7
1_555
A
THP
202
C
THP
7
1_555
A
HOH
307
D
HOH
7
1_555
A
HOH
314
D
HOH
7
1_555
A
ARG
35
A
ARG
35
22
1_555
A
ASP
40
A
ASP
40
22
1_555
A
LYS
84
A
LYS
78
22
1_555
A
TYR
85
A
TYR
79
22
1_555
A
ARG
87
A
ARG
81
22
1_555
A
LEU
89
A
LEU
83
22
1_555
A
TYR
113
A
TYR
107
22
1_555
A
TYR
115
A
TYR
109
22
1_555
A
LYS
127
A
LYS
121
22
1_655
A
CA
201
B
CA
22
1_555
A
HOH
307
D
HOH
22
1_555
A
HOH
308
D
HOH
22
1_555
A
HOH
315
D
HOH
22
1_555
A
HOH
328
D
HOH
22
1_555
A
HOH
331
D
HOH
22
1_555
A
HOH
333
D
HOH
22
1_555
A
HOH
335
D
HOH
22
1_555
A
HOH
342
D
HOH
22
1_555
A
HOH
346
D
HOH
22
1_555
A
HOH
360
D
HOH
22
1_555
A
HOH
366
D
HOH
22
1_555
A
HOH
389
D
HOH
22
1_555
4
P 1 21 1