0.007808
0.000000
0.000000
0.000000
0.007808
0.000000
0.000000
0.000000
0.013507
0.00000
0.00000
0.00000
Ahmed, K.
Gui, W.J.
Tso, S.C.
Chuang, J.L.
Wynn, R.M.
Chuang, D.T.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
128.079
128.079
74.035
C9 H4 Cl2 O2 S
247.098
3,6-dichloro-1-benzothiophene-2-carboxylic acid
non-polymer
C10 H15 N5 O10 P2
427.201
n
ADENOSINE-5'-DIPHOSPHATE
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
K 1
39.098
POTASSIUM ION
non-polymer
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Mg 2
24.305
MAGNESIUM ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
CL
Y
2
N
C
Y
3
N
C
Y
4
N
C
Y
5
N
C
Y
6
N
C
Y
7
N
C
Y
8
N
C
N
9
N
CL
Y
10
N
S
Y
11
N
C
N
12
N
C
N
13
N
O
N
14
N
O
N
15
N
H
N
16
N
H
N
17
N
H
N
18
N
H
N
19
N
P
N
20
N
O
N
21
N
O
N
22
N
O
N
23
S
P
N
24
N
O
N
25
N
O
N
26
N
O
N
27
N
O
N
28
N
C
N
29
R
C
N
30
N
O
N
31
S
C
N
32
N
O
N
33
R
C
N
34
N
O
N
35
R
C
Y
36
N
N
Y
37
N
C
Y
38
N
N
Y
39
N
C
Y
40
N
C
N
41
N
N
Y
42
N
N
Y
43
N
C
Y
44
N
N
Y
45
N
C
N
46
N
H
N
47
N
H
N
48
N
H
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
N
N
62
S
C
N
63
N
C
N
64
N
O
N
65
N
C
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
S
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
C
N
80
N
C
N
81
N
N
N
82
N
C
N
83
N
N
N
84
N
N
N
85
N
O
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
N
N
102
S
C
N
103
N
C
N
104
N
O
N
105
N
C
N
106
N
C
N
107
N
O
N
108
N
N
N
109
N
O
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
N
N
119
S
C
N
120
N
C
N
121
N
O
N
122
N
C
N
123
N
C
N
124
N
O
N
125
N
O
N
126
N
O
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
N
N
135
R
C
N
136
N
C
N
137
N
O
N
138
N
C
N
139
N
S
N
140
N
O
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
N
N
149
S
C
N
150
N
C
N
151
N
O
N
152
N
C
N
153
N
C
N
154
N
C
N
155
N
O
N
156
N
N
N
157
N
O
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
N
N
169
S
C
N
170
N
C
N
171
N
O
N
172
N
C
N
173
N
C
N
174
N
C
N
175
N
O
N
176
N
O
N
177
N
O
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
N
N
188
N
C
N
189
N
C
N
190
N
O
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
N
N
198
S
C
N
199
N
C
N
200
N
O
N
201
N
C
Y
202
N
C
Y
203
N
N
Y
204
N
C
Y
205
N
C
Y
206
N
N
N
207
N
O
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
O
N
219
N
H
N
220
N
H
N
221
N
N
N
222
S
C
N
223
N
C
N
224
N
O
N
225
S
C
N
226
N
C
N
227
N
C
N
228
N
C
N
229
N
O
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
K
N
244
N
N
N
245
S
C
N
246
N
C
N
247
N
O
N
248
N
C
N
249
N
C
N
250
N
C
N
251
N
C
N
252
N
O
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
N
N
267
S
C
N
268
N
C
N
269
N
O
N
270
N
C
N
271
N
C
N
272
N
C
N
273
N
C
N
274
N
N
N
275
N
O
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
N
N
292
S
C
N
293
N
C
N
294
N
O
N
295
N
C
N
296
N
C
N
297
N
S
N
298
N
C
N
299
N
O
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
MG
N
312
N
N
N
313
S
C
N
314
N
C
N
315
N
O
N
316
N
C
Y
317
N
C
Y
318
N
C
Y
319
N
C
Y
320
N
C
Y
321
N
C
Y
322
N
C
N
323
N
O
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
N
N
336
S
C
N
337
N
C
N
338
N
O
N
339
N
C
N
340
N
C
N
341
N
C
N
342
N
O
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
N
N
353
S
C
N
354
N
C
N
355
N
O
N
356
N
C
N
357
N
O
N
358
N
O
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
N
N
367
S
C
N
368
N
C
N
369
N
O
N
370
R
C
N
371
N
O
N
372
N
C
N
373
N
O
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
N
N
384
S
C
N
385
N
C
N
386
N
O
N
387
N
C
Y
388
N
C
Y
389
N
C
Y
390
N
C
Y
391
N
N
Y
392
N
C
Y
393
N
C
Y
394
N
C
Y
395
N
C
Y
396
N
C
N
397
N
O
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
N
N
411
S
C
N
412
N
C
N
413
N
O
N
414
N
C
Y
415
N
C
Y
416
N
C
Y
417
N
C
Y
418
N
C
Y
419
N
C
Y
420
N
C
N
421
N
O
N
422
N
O
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
N
N
435
S
C
N
436
N
C
N
437
N
O
N
438
N
C
N
439
N
C
N
440
N
C
N
441
N
O
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
1
N
doub
N
2
N
sing
N
3
N
sing
N
4
N
sing
Y
5
N
doub
Y
6
N
sing
Y
7
N
sing
Y
8
N
sing
Y
9
N
doub
Y
10
N
sing
Y
11
N
sing
Y
12
N
doub
Y
13
N
doub
Y
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
doub
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
doub
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
Y
49
N
sing
Y
50
N
sing
Y
51
N
doub
N
52
N
sing
Y
53
N
sing
Y
54
N
sing
Y
55
N
doub
N
56
N
sing
Y
57
N
doub
N
58
N
sing
N
59
N
sing
Y
60
N
sing
Y
61
N
doub
N
62
N
sing
Y
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
doub
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
doub
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
doub
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
doub
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
doub
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
doub
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
doub
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
doub
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
doub
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
doub
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
doub
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
Y
203
N
sing
Y
204
N
doub
Y
205
N
doub
N
206
N
sing
Y
207
N
sing
N
208
N
sing
Y
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
doub
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
doub
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
doub
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
doub
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
doub
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
Y
311
N
doub
Y
312
N
sing
Y
313
N
sing
N
314
N
sing
Y
315
N
doub
N
316
N
sing
Y
317
N
doub
N
318
N
sing
Y
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
doub
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
doub
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
doub
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
doub
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
Y
380
N
doub
Y
381
N
sing
Y
382
N
sing
N
383
N
sing
Y
384
N
doub
Y
385
N
sing
Y
386
N
sing
N
387
N
sing
Y
388
N
sing
Y
389
N
doub
N
390
N
sing
Y
391
N
doub
N
392
N
sing
Y
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
doub
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
Y
408
N
doub
Y
409
N
sing
Y
410
N
sing
N
411
N
sing
Y
412
N
doub
N
413
N
sing
Y
414
N
doub
N
415
N
sing
Y
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
doub
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
To be Published
0353
Crystal structure of I170F mutant branched-chain alpha-ketoacid dehydrogenase kinase in complex with 3,6-dichlorobenzo[b]thiophene-2-carboxylic acid
10.2210/pdb3vad/pdb
pdb_00003vad
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2011-10-21
ADSC QUANTUM 315r
double-crystal
SINGLE WAVELENGTH
M
x-ray
1
0.97915
1.0
19-ID
APS
0.97915
SYNCHROTRON
APS BEAMLINE 19-ID
47408.262
[3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial
2.7.11.4
F170I
1
man
polymer
427.201
ADENOSINE-5'-DIPHOSPHATE
1
syn
non-polymer
24.305
MAGNESIUM ION
1
syn
non-polymer
39.098
POTASSIUM ION
1
syn
non-polymer
247.098
3,6-dichloro-1-benzothiophene-2-carboxylic acid
2
syn
non-polymer
18.015
water
2
nat
water
Branched-chain alpha-ketoacid dehydrogenase kinase, BCKD-kinase, BCKDHKIN
no
no
MILTSVLGSGPRSGSSLWPLLGSSLSLRVRSTSATDTHHVELARERSKTVTSFYNQSAIDVVAEKPSVRLTPTMMLYSGR
SQDGSHLLKSGRYLQQELPVRIAHRIKGFRSLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADEAQYCQLVRQLLD
DHKDVVTLLAEGLRESRKHIEDEKLVRYFLDKTLTSRLGFRMLATHHLALHEDKPDFVGIICTRLSPKKIIEKWVDFARR
LCEHKYGNAPRVRINGHVAARFPFIPMPLDYILPELLKNAMRATMESHLDTPYNVPDVVITIANNDVDLIIRISDRGGGI
AHKDLDRVMDYHFTTAEASTQDPRISPLFGHLDMHSGGQSGPMHGFGFGLPTSRAYAEYLGGSLQLQSLQGIGTDVYLRL
RHIDGREESFRIHHHHHH
MILTSVLGSGPRSGSSLWPLLGSSLSLRVRSTSATDTHHVELARERSKTVTSFYNQSAIDVVAEKPSVRLTPTMMLYSGR
SQDGSHLLKSGRYLQQELPVRIAHRIKGFRSLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADEAQYCQLVRQLLD
DHKDVVTLLAEGLRESRKHIEDEKLVRYFLDKTLTSRLGFRMLATHHLALHEDKPDFVGIICTRLSPKKIIEKWVDFARR
LCEHKYGNAPRVRINGHVAARFPFIPMPLDYILPELLKNAMRATMESHLDTPYNVPDVVITIANNDVDLIIRISDRGGGI
AHKDLDRVMDYHFTTAEASTQDPRISPLFGHLDMHSGGQSGPMHGFGFGLPTSRAYAEYLGGSLQLQSLQGIGTDVYLRL
RHIDGREESFRIHHHHHH
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
rat
sample
Bckdk
10116
Rattus norvegicus
562
Escherichia coli
BL21-GroESL
PLASMID
pTrckHisB
1
3.20
61.59
VAPOR DIFFUSION, HANGING DROP
7.5
12% PEG8000, 0.1 M Tris, 1.9 M NaCl, 250mM KCl, 400mM Arg-HCl,2mM MgCl2, 5% glycerol, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
293
chem_comp_atom
chem_comp_bond
database_2
pdbx_struct_conn_angle
struct_conn
struct_ref_seq_dif
struct_site
repository
Initial release
Structure summary
Data collection
Database references
Derived calculations
1
0
2013-01-16
1
1
2014-10-08
1
2
2024-02-28
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2011-12-29
REL
REL
ADP
ADENOSINE-5'-DIPHOSPHATE
MG
MAGNESIUM ION
K
POTASSIUM ION
0F1
3,6-dichloro-1-benzothiophene-2-carboxylic acid
HOH
water
ADP
1
2
ADP
ADP
401
A
MG
1
3
MG
MG
402
A
K
1
4
K
K
403
A
BT2
1
5
0F1
0F1
404
A
BT2
1
5
0F1
0F1
405
A
HOH
1
6
HOH
HOH
501
A
HOH
2
6
HOH
HOH
502
A
n
1
-29
A
n
2
-28
A
n
3
-27
A
n
4
-26
A
n
5
-25
A
n
6
-24
A
n
7
-23
A
n
8
-22
A
n
9
-21
A
n
10
-20
A
n
11
-19
A
n
12
-18
A
n
13
-17
A
n
14
-16
A
n
15
-15
A
n
16
-14
A
n
17
-13
A
n
18
-12
A
n
19
-11
A
n
20
-10
A
n
21
-9
A
n
22
-8
A
n
23
-7
A
n
24
-6
A
n
25
-5
A
n
26
-4
A
n
27
-3
A
n
28
-2
A
n
29
-1
A
n
30
0
A
n
31
1
A
n
32
2
A
n
33
3
A
n
34
4
A
n
35
5
A
n
36
6
A
n
37
7
A
n
38
8
A
n
39
9
A
n
40
10
A
n
41
11
A
n
42
12
A
n
43
13
A
n
44
14
A
n
45
15
A
n
46
16
A
n
47
17
A
n
48
18
A
n
49
19
A
n
50
20
A
n
51
21
A
n
52
22
A
n
53
23
A
n
54
24
A
n
55
25
A
n
56
26
A
n
57
27
A
n
58
28
A
n
59
29
A
n
60
30
A
n
61
31
A
n
62
32
A
n
63
33
A
n
64
34
A
n
65
35
A
n
66
36
A
n
67
37
A
VAL
38
n
68
VAL
38
A
ARG
39
n
69
ARG
39
A
LEU
40
n
70
LEU
40
A
THR
41
n
71
THR
41
A
PRO
42
n
72
PRO
42
A
THR
43
n
73
THR
43
A
MET
44
n
74
MET
44
A
MET
45
n
75
MET
45
A
LEU
46
n
76
LEU
46
A
TYR
47
n
77
TYR
47
A
SER
48
n
78
SER
48
A
GLY
49
n
79
GLY
49
A
ARG
50
n
80
ARG
50
A
SER
51
n
81
SER
51
A
GLN
52
n
82
GLN
52
A
ASP
53
n
83
ASP
53
A
GLY
54
n
84
GLY
54
A
SER
55
n
85
SER
55
A
HIS
56
n
86
HIS
56
A
LEU
57
n
87
LEU
57
A
LEU
58
n
88
LEU
58
A
LYS
59
n
89
LYS
59
A
SER
60
n
90
SER
60
A
GLY
61
n
91
GLY
61
A
ARG
62
n
92
ARG
62
A
TYR
63
n
93
TYR
63
A
LEU
64
n
94
LEU
64
A
GLN
65
n
95
GLN
65
A
GLN
66
n
96
GLN
66
A
GLU
67
n
97
GLU
67
A
LEU
68
n
98
LEU
68
A
PRO
69
n
99
PRO
69
A
VAL
70
n
100
VAL
70
A
ARG
71
n
101
ARG
71
A
ILE
72
n
102
ILE
72
A
ALA
73
n
103
ALA
73
A
HIS
74
n
104
HIS
74
A
ARG
75
n
105
ARG
75
A
ILE
76
n
106
ILE
76
A
LYS
77
n
107
LYS
77
A
GLY
78
n
108
GLY
78
A
PHE
79
n
109
PHE
79
A
ARG
80
n
110
ARG
80
A
SER
81
n
111
SER
81
A
LEU
82
n
112
LEU
82
A
PRO
83
n
113
PRO
83
A
PHE
84
n
114
PHE
84
A
ILE
85
n
115
ILE
85
A
ILE
86
n
116
ILE
86
A
GLY
87
n
117
GLY
87
A
CYS
88
n
118
CYS
88
A
ASN
89
n
119
ASN
89
A
PRO
90
n
120
PRO
90
A
THR
91
n
121
THR
91
A
ILE
92
n
122
ILE
92
A
LEU
93
n
123
LEU
93
A
HIS
94
n
124
HIS
94
A
VAL
95
n
125
VAL
95
A
HIS
96
n
126
HIS
96
A
GLU
97
n
127
GLU
97
A
LEU
98
n
128
LEU
98
A
TYR
99
n
129
TYR
99
A
ILE
100
n
130
ILE
100
A
ARG
101
n
131
ARG
101
A
ALA
102
n
132
ALA
102
A
PHE
103
n
133
PHE
103
A
GLN
104
n
134
GLN
104
A
LYS
105
n
135
LYS
105
A
LEU
106
n
136
LEU
106
A
THR
107
n
137
THR
107
A
ASP
108
n
138
ASP
108
A
PHE
109
n
139
PHE
109
A
PRO
110
n
140
PRO
110
A
PRO
111
n
141
PRO
111
A
ILE
112
n
142
ILE
112
A
LYS
113
n
143
LYS
113
A
ASP
114
n
144
ASP
114
A
GLN
115
n
145
GLN
115
A
ALA
116
n
146
ALA
116
A
ASP
117
n
147
ASP
117
A
GLU
118
n
148
GLU
118
A
ALA
119
n
149
ALA
119
A
GLN
120
n
150
GLN
120
A
TYR
121
n
151
TYR
121
A
CYS
122
n
152
CYS
122
A
GLN
123
n
153
GLN
123
A
LEU
124
n
154
LEU
124
A
VAL
125
n
155
VAL
125
A
ARG
126
n
156
ARG
126
A
GLN
127
n
157
GLN
127
A
LEU
128
n
158
LEU
128
A
LEU
129
n
159
LEU
129
A
ASP
130
n
160
ASP
130
A
ASP
131
n
161
ASP
131
A
HIS
132
n
162
HIS
132
A
LYS
133
n
163
LYS
133
A
ASP
134
n
164
ASP
134
A
VAL
135
n
165
VAL
135
A
VAL
136
n
166
VAL
136
A
THR
137
n
167
THR
137
A
LEU
138
n
168
LEU
138
A
LEU
139
n
169
LEU
139
A
ALA
140
n
170
ALA
140
A
GLU
141
n
171
GLU
141
A
GLY
142
n
172
GLY
142
A
LEU
143
n
173
LEU
143
A
ARG
144
n
174
ARG
144
A
GLU
145
n
175
GLU
145
A
SER
146
n
176
SER
146
A
ARG
147
n
177
ARG
147
A
LYS
148
n
178
LYS
148
A
HIS
149
n
179
HIS
149
A
ILE
150
n
180
ILE
150
A
GLU
151
n
181
GLU
151
A
ASP
152
n
182
ASP
152
A
GLU
153
n
183
GLU
153
A
LYS
154
n
184
LYS
154
A
LEU
155
n
185
LEU
155
A
VAL
156
n
186
VAL
156
A
ARG
157
n
187
ARG
157
A
TYR
158
n
188
TYR
158
A
PHE
159
n
189
PHE
159
A
LEU
160
n
190
LEU
160
A
ASP
161
n
191
ASP
161
A
LYS
162
n
192
LYS
162
A
THR
163
n
193
THR
163
A
LEU
164
n
194
LEU
164
A
THR
165
n
195
THR
165
A
SER
166
n
196
SER
166
A
ARG
167
n
197
ARG
167
A
LEU
168
n
198
LEU
168
A
GLY
169
n
199
GLY
169
A
PHE
170
n
200
PHE
170
A
ARG
171
n
201
ARG
171
A
MET
172
n
202
MET
172
A
LEU
173
n
203
LEU
173
A
ALA
174
n
204
ALA
174
A
THR
175
n
205
THR
175
A
HIS
176
n
206
HIS
176
A
HIS
177
n
207
HIS
177
A
LEU
178
n
208
LEU
178
A
ALA
179
n
209
ALA
179
A
LEU
180
n
210
LEU
180
A
HIS
181
n
211
HIS
181
A
GLU
182
n
212
GLU
182
A
ASP
183
n
213
ASP
183
A
LYS
184
n
214
LYS
184
A
PRO
185
n
215
PRO
185
A
ASP
186
n
216
ASP
186
A
PHE
187
n
217
PHE
187
A
VAL
188
n
218
VAL
188
A
GLY
189
n
219
GLY
189
A
ILE
190
n
220
ILE
190
A
ILE
191
n
221
ILE
191
A
CYS
192
n
222
CYS
192
A
THR
193
n
223
THR
193
A
ARG
194
n
224
ARG
194
A
LEU
195
n
225
LEU
195
A
SER
196
n
226
SER
196
A
PRO
197
n
227
PRO
197
A
LYS
198
n
228
LYS
198
A
LYS
199
n
229
LYS
199
A
ILE
200
n
230
ILE
200
A
ILE
201
n
231
ILE
201
A
GLU
202
n
232
GLU
202
A
LYS
203
n
233
LYS
203
A
TRP
204
n
234
TRP
204
A
VAL
205
n
235
VAL
205
A
ASP
206
n
236
ASP
206
A
PHE
207
n
237
PHE
207
A
ALA
208
n
238
ALA
208
A
ARG
209
n
239
ARG
209
A
ARG
210
n
240
ARG
210
A
LEU
211
n
241
LEU
211
A
CYS
212
n
242
CYS
212
A
GLU
213
n
243
GLU
213
A
HIS
214
n
244
HIS
214
A
LYS
215
n
245
LYS
215
A
TYR
216
n
246
TYR
216
A
GLY
217
n
247
GLY
217
A
ASN
218
n
248
ASN
218
A
ALA
219
n
249
ALA
219
A
PRO
220
n
250
PRO
220
A
ARG
221
n
251
ARG
221
A
VAL
222
n
252
VAL
222
A
ARG
223
n
253
ARG
223
A
ILE
224
n
254
ILE
224
A
ASN
225
n
255
ASN
225
A
GLY
226
n
256
GLY
226
A
HIS
227
n
257
HIS
227
A
VAL
228
n
258
VAL
228
A
ALA
229
n
259
ALA
229
A
ALA
230
n
260
ALA
230
A
ARG
231
n
261
ARG
231
A
PHE
232
n
262
PHE
232
A
PRO
233
n
263
PRO
233
A
PHE
234
n
264
PHE
234
A
ILE
235
n
265
ILE
235
A
PRO
236
n
266
PRO
236
A
MET
237
n
267
MET
237
A
PRO
238
n
268
PRO
238
A
LEU
239
n
269
LEU
239
A
ASP
240
n
270
ASP
240
A
TYR
241
n
271
TYR
241
A
ILE
242
n
272
ILE
242
A
LEU
243
n
273
LEU
243
A
PRO
244
n
274
PRO
244
A
GLU
245
n
275
GLU
245
A
LEU
246
n
276
LEU
246
A
LEU
247
n
277
LEU
247
A
LYS
248
n
278
LYS
248
A
ASN
249
n
279
ASN
249
A
ALA
250
n
280
ALA
250
A
MET
251
n
281
MET
251
A
ARG
252
n
282
ARG
252
A
ALA
253
n
283
ALA
253
A
THR
254
n
284
THR
254
A
MET
255
n
285
MET
255
A
GLU
256
n
286
GLU
256
A
SER
257
n
287
SER
257
A
HIS
258
n
288
HIS
258
A
LEU
259
n
289
LEU
259
A
ASP
260
n
290
ASP
260
A
THR
261
n
291
THR
261
A
PRO
262
n
292
PRO
262
A
TYR
263
n
293
TYR
263
A
ASN
264
n
294
ASN
264
A
VAL
265
n
295
VAL
265
A
PRO
266
n
296
PRO
266
A
ASP
267
n
297
ASP
267
A
VAL
268
n
298
VAL
268
A
VAL
269
n
299
VAL
269
A
ILE
270
n
300
ILE
270
A
THR
271
n
301
THR
271
A
ILE
272
n
302
ILE
272
A
ALA
273
n
303
ALA
273
A
ASN
274
n
304
ASN
274
A
ASN
275
n
305
ASN
275
A
ASP
276
n
306
ASP
276
A
VAL
277
n
307
VAL
277
A
ASP
278
n
308
ASP
278
A
LEU
279
n
309
LEU
279
A
ILE
280
n
310
ILE
280
A
ILE
281
n
311
ILE
281
A
ARG
282
n
312
ARG
282
A
ILE
283
n
313
ILE
283
A
SER
284
n
314
SER
284
A
ASP
285
n
315
ASP
285
A
ARG
286
n
316
ARG
286
A
GLY
287
n
317
GLY
287
A
GLY
288
n
318
GLY
288
A
GLY
289
n
319
GLY
289
A
ILE
290
n
320
ILE
290
A
ALA
291
n
321
ALA
291
A
HIS
292
n
322
HIS
292
A
LYS
293
n
323
LYS
293
A
ASP
294
n
324
ASP
294
A
LEU
295
n
325
LEU
295
A
ASP
296
n
326
ASP
296
A
ARG
297
n
327
ARG
297
A
VAL
298
n
328
VAL
298
A
MET
299
n
329
MET
299
A
ASP
300
n
330
ASP
300
A
TYR
301
n
331
TYR
301
A
HIS
302
n
332
HIS
302
A
PHE
303
n
333
PHE
303
A
THR
304
n
334
THR
304
A
THR
305
n
335
THR
305
A
ALA
306
n
336
ALA
306
A
n
337
307
A
n
338
308
A
n
339
309
A
n
340
310
A
n
341
311
A
n
342
312
A
n
343
313
A
n
344
314
A
n
345
315
A
n
346
316
A
n
347
317
A
n
348
318
A
n
349
319
A
n
350
320
A
n
351
321
A
n
352
322
A
n
353
323
A
n
354
324
A
n
355
325
A
n
356
326
A
n
357
327
A
n
358
328
A
n
359
329
A
n
360
330
A
n
361
331
A
n
362
332
A
n
363
333
A
HIS
334
n
364
HIS
334
A
GLY
335
n
365
GLY
335
A
PHE
336
n
366
PHE
336
A
GLY
337
n
367
GLY
337
A
PHE
338
n
368
PHE
338
A
GLY
339
n
369
GLY
339
A
LEU
340
n
370
LEU
340
A
PRO
341
n
371
PRO
341
A
THR
342
n
372
THR
342
A
SER
343
n
373
SER
343
A
ARG
344
n
374
ARG
344
A
ALA
345
n
375
ALA
345
A
TYR
346
n
376
TYR
346
A
ALA
347
n
377
ALA
347
A
GLU
348
n
378
GLU
348
A
TYR
349
n
379
TYR
349
A
LEU
350
n
380
LEU
350
A
GLY
351
n
381
GLY
351
A
GLY
352
n
382
GLY
352
A
SER
353
n
383
SER
353
A
LEU
354
n
384
LEU
354
A
GLN
355
n
385
GLN
355
A
LEU
356
n
386
LEU
356
A
GLN
357
n
387
GLN
357
A
SER
358
n
388
SER
358
A
LEU
359
n
389
LEU
359
A
GLN
360
n
390
GLN
360
A
GLY
361
n
391
GLY
361
A
ILE
362
n
392
ILE
362
A
GLY
363
n
393
GLY
363
A
THR
364
n
394
THR
364
A
ASP
365
n
395
ASP
365
A
VAL
366
n
396
VAL
366
A
TYR
367
n
397
TYR
367
A
LEU
368
n
398
LEU
368
A
ARG
369
n
399
ARG
369
A
LEU
370
n
400
LEU
370
A
ARG
371
n
401
ARG
371
A
HIS
372
n
402
HIS
372
A
ILE
373
n
403
ILE
373
A
ASP
374
n
404
ASP
374
A
n
405
375
A
n
406
376
A
n
407
377
A
n
408
378
A
n
409
379
A
n
410
380
A
n
411
381
A
n
412
382
A
n
413
383
A
n
414
384
A
n
415
385
A
n
416
386
A
n
417
387
A
n
418
388
A
author_defined_assembly
2
dimeric
10680
-83
56390
A
ASN
249
A
OD1
ASN
279
1_555
A
MG
402
C
MG
MG
1_555
A
ADP
401
B
O2A
ADP
1_555
85.3
A
ASN
249
A
OD1
ASN
279
1_555
A
MG
402
C
MG
MG
1_555
A
ADP
401
B
O2B
ADP
1_555
81.7
A
ADP
401
B
O2A
ADP
1_555
A
MG
402
C
MG
MG
1_555
A
ADP
401
B
O2B
ADP
1_555
80.1
A
ASN
249
A
OD1
ASN
279
1_555
A
MG
402
C
MG
MG
1_555
A
HOH
501
G
O
HOH
1_555
72.7
A
ADP
401
B
O2A
ADP
1_555
A
MG
402
C
MG
MG
1_555
A
HOH
501
G
O
HOH
1_555
94.3
A
ADP
401
B
O2B
ADP
1_555
A
MG
402
C
MG
MG
1_555
A
HOH
501
G
O
HOH
1_555
154.2
A
ASN
249
A
OD1
ASN
279
1_555
A
MG
402
C
MG
MG
1_555
A
HOH
502
G
O
HOH
1_555
79.3
A
ADP
401
B
O2A
ADP
1_555
A
MG
402
C
MG
MG
1_555
A
HOH
502
G
O
HOH
1_555
161.5
A
ADP
401
B
O2B
ADP
1_555
A
MG
402
C
MG
MG
1_555
A
HOH
502
G
O
HOH
1_555
87.5
A
HOH
501
G
O
HOH
1_555
A
MG
402
C
MG
MG
1_555
A
HOH
502
G
O
HOH
1_555
90.9
A
VAL
298
A
O
VAL
328
1_555
A
K
403
D
K
K
1_555
A
ASP
300
A
O
ASP
330
1_555
93.9
A
VAL
298
A
O
VAL
328
1_555
A
K
403
D
K
K
1_555
A
PHE
303
A
O
PHE
333
1_555
123.5
A
ASP
300
A
O
ASP
330
1_555
A
K
403
D
K
K
1_555
A
PHE
303
A
O
PHE
333
1_555
96.5
A
VAL
298
A
O
VAL
328
1_555
A
K
403
D
K
K
1_555
A
GLY
337
A
O
GLY
367
1_555
156.5
A
ASP
300
A
O
ASP
330
1_555
A
K
403
D
K
K
1_555
A
GLY
337
A
O
GLY
367
1_555
81.7
A
PHE
303
A
O
PHE
333
1_555
A
K
403
D
K
K
1_555
A
GLY
337
A
O
GLY
367
1_555
80.0
A
VAL
298
A
O
VAL
328
1_555
A
K
403
D
K
K
1_555
A
ADP
401
B
O1A
ADP
1_555
92.3
A
ASP
300
A
O
ASP
330
1_555
A
K
403
D
K
K
1_555
A
ADP
401
B
O1A
ADP
1_555
149.0
A
PHE
303
A
O
PHE
333
1_555
A
K
403
D
K
K
1_555
A
ADP
401
B
O1A
ADP
1_555
105.2
A
GLY
337
A
O
GLY
367
1_555
A
K
403
D
K
K
1_555
A
ADP
401
B
O1A
ADP
1_555
80.6
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
8_555
-y,-x,-z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
A
N
ARG
39
A
N
ARG
69
A
O
LEU
46
A
O
LEU
76
A
N
VAL
188
A
N
VAL
218
A
O
ILE
191
A
O
ILE
221
A
N
LEU
195
A
N
LEU
225
A
O
PHE
232
A
O
PHE
262
A
N
ARG
223
A
N
ARG
253
A
O
ILE
270
A
O
ILE
300
A
N
THR
271
A
N
THR
301
A
O
ARG
282
A
O
ARG
312
A
N
LEU
279
A
N
LEU
309
A
O
LEU
370
A
O
LEU
400
A
O
GLY
363
A
O
GLY
393
A
N
LEU
359
A
N
LEU
389
1
A
MET
-29
A
MET
1
1
Y
1
A
ILE
-28
A
ILE
2
1
Y
1
A
LEU
-27
A
LEU
3
1
Y
1
A
THR
-26
A
THR
4
1
Y
1
A
SER
-25
A
SER
5
1
Y
1
A
VAL
-24
A
VAL
6
1
Y
1
A
LEU
-23
A
LEU
7
1
Y
1
A
GLY
-22
A
GLY
8
1
Y
1
A
SER
-21
A
SER
9
1
Y
1
A
GLY
-20
A
GLY
10
1
Y
1
A
PRO
-19
A
PRO
11
1
Y
1
A
ARG
-18
A
ARG
12
1
Y
1
A
SER
-17
A
SER
13
1
Y
1
A
GLY
-16
A
GLY
14
1
Y
1
A
SER
-15
A
SER
15
1
Y
1
A
SER
-14
A
SER
16
1
Y
1
A
LEU
-13
A
LEU
17
1
Y
1
A
TRP
-12
A
TRP
18
1
Y
1
A
PRO
-11
A
PRO
19
1
Y
1
A
LEU
-10
A
LEU
20
1
Y
1
A
LEU
-9
A
LEU
21
1
Y
1
A
GLY
-8
A
GLY
22
1
Y
1
A
SER
-7
A
SER
23
1
Y
1
A
SER
-6
A
SER
24
1
Y
1
A
LEU
-5
A
LEU
25
1
Y
1
A
SER
-4
A
SER
26
1
Y
1
A
LEU
-3
A
LEU
27
1
Y
1
A
ARG
-2
A
ARG
28
1
Y
1
A
VAL
-1
A
VAL
29
1
Y
1
A
ARG
0
A
ARG
30
1
Y
1
A
SER
1
A
SER
31
1
Y
1
A
THR
2
A
THR
32
1
Y
1
A
SER
3
A
SER
33
1
Y
1
A
ALA
4
A
ALA
34
1
Y
1
A
THR
5
A
THR
35
1
Y
1
A
ASP
6
A
ASP
36
1
Y
1
A
THR
7
A
THR
37
1
Y
1
A
HIS
8
A
HIS
38
1
Y
1
A
HIS
9
A
HIS
39
1
Y
1
A
VAL
10
A
VAL
40
1
Y
1
A
GLU
11
A
GLU
41
1
Y
1
A
LEU
12
A
LEU
42
1
Y
1
A
ALA
13
A
ALA
43
1
Y
1
A
ARG
14
A
ARG
44
1
Y
1
A
GLU
15
A
GLU
45
1
Y
1
A
ARG
16
A
ARG
46
1
Y
1
A
SER
17
A
SER
47
1
Y
1
A
LYS
18
A
LYS
48
1
Y
1
A
THR
19
A
THR
49
1
Y
1
A
VAL
20
A
VAL
50
1
Y
1
A
THR
21
A
THR
51
1
Y
1
A
SER
22
A
SER
52
1
Y
1
A
PHE
23
A
PHE
53
1
Y
1
A
TYR
24
A
TYR
54
1
Y
1
A
ASN
25
A
ASN
55
1
Y
1
A
GLN
26
A
GLN
56
1
Y
1
A
SER
27
A
SER
57
1
Y
1
A
ALA
28
A
ALA
58
1
Y
1
A
ILE
29
A
ILE
59
1
Y
1
A
ASP
30
A
ASP
60
1
Y
1
A
VAL
31
A
VAL
61
1
Y
1
A
VAL
32
A
VAL
62
1
Y
1
A
ALA
33
A
ALA
63
1
Y
1
A
GLU
34
A
GLU
64
1
Y
1
A
LYS
35
A
LYS
65
1
Y
1
A
PRO
36
A
PRO
66
1
Y
1
A
SER
37
A
SER
67
1
Y
1
A
GLU
307
A
GLU
337
1
Y
1
A
ALA
308
A
ALA
338
1
Y
1
A
SER
309
A
SER
339
1
Y
1
A
THR
310
A
THR
340
1
Y
1
A
GLN
311
A
GLN
341
1
Y
1
A
ASP
312
A
ASP
342
1
Y
1
A
PRO
313
A
PRO
343
1
Y
1
A
ARG
314
A
ARG
344
1
Y
1
A
ILE
315
A
ILE
345
1
Y
1
A
SER
316
A
SER
346
1
Y
1
A
PRO
317
A
PRO
347
1
Y
1
A
LEU
318
A
LEU
348
1
Y
1
A
PHE
319
A
PHE
349
1
Y
1
A
GLY
320
A
GLY
350
1
Y
1
A
HIS
321
A
HIS
351
1
Y
1
A
LEU
322
A
LEU
352
1
Y
1
A
ASP
323
A
ASP
353
1
Y
1
A
MET
324
A
MET
354
1
Y
1
A
HIS
325
A
HIS
355
1
Y
1
A
SER
326
A
SER
356
1
Y
1
A
GLY
327
A
GLY
357
1
Y
1
A
GLY
328
A
GLY
358
1
Y
1
A
GLN
329
A
GLN
359
1
Y
1
A
SER
330
A
SER
360
1
Y
1
A
GLY
331
A
GLY
361
1
Y
1
A
PRO
332
A
PRO
362
1
Y
1
A
MET
333
A
MET
363
1
Y
1
A
GLY
375
A
GLY
405
1
Y
1
A
ARG
376
A
ARG
406
1
Y
1
A
GLU
377
A
GLU
407
1
Y
1
A
GLU
378
A
GLU
408
1
Y
1
A
SER
379
A
SER
409
1
Y
1
A
PHE
380
A
PHE
410
1
Y
1
A
ARG
381
A
ARG
411
1
Y
1
A
ILE
382
A
ILE
412
1
Y
1
A
HIS
383
A
HIS
413
1
Y
1
A
HIS
384
A
HIS
414
1
Y
1
A
HIS
385
A
HIS
415
1
Y
1
A
HIS
386
A
HIS
416
1
Y
1
A
HIS
387
A
HIS
417
1
Y
1
A
HIS
388
A
HIS
418
1
Y
1
A
THR
41
-122.19
-75.35
1
A
ARG
286
-106.96
42.79
1
A
HIS
302
79.28
-8.86
1
A
ILE
362
-126.06
-63.37
-0.2610
-0.0000
0.0000
-0.2610
0.0000
0.5220
0.2761
0.2264
0.2288
2.602
40.502
991
19454
19328
5.13
99.35
0.81
random
1
0.13
MOLECULAR REPLACEMENT
26.94
0.83
1.10
ML
FLAT BULK SOLVENT MODEL
48.652
0.355
2.602
40.502
2
2564
57
0
2505
0.011
2674
1.370
3632
16.183
1009
0.085
394
0.005
462
0.3605
0.2852
2.7387
141
2529
98.00
0.3672
0.2720
2.9102
154
2536
100.00
0.2848
0.2513
3.1348
133
2589
99.00
0.3096
0.2419
3.4502
153
2592
99.00
0.2581
0.2259
3.9490
148
2603
100.00
0.2459
0.1996
4.9739
141
2661
100.00
0.2616
0.2209
40.5070
121
2827
100.00
2.6
50
3VAD
19456
19442
2
2
0.074
0.087
1
24.0
8.4
99.9
0.877
2.6
2.64
2.31
958
0.746
1
8.4
100
data collection
HKL-2000
model building
PHENIX
(phenix.refine: 1.7.1_743)
refinement
PHENIX
(phenix.refine: 1.7.1_743)
data reduction
HKL-2000
data scaling
HKL-2000
phasing
PHENIX
1.7.1_743
Crystal structure of I170F mutant branched-chain alpha-ketoacid dehydrogenase kinase in complex with 3,6-dichlorobenzo[b]thiophene-2-carboxylic acid
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
5
N
N
6
N
N
A
GLY
54
A
GLY
84
HELX_P
A
SER
81
A
SER
111
1
1
28
A
PRO
83
A
PRO
113
HELX_P
A
CYS
88
A
CYS
118
1
2
6
A
ASN
89
A
ASN
119
HELX_P
A
PHE
109
A
PHE
139
1
3
21
A
ASP
114
A
ASP
144
HELX_P
A
HIS
132
A
HIS
162
1
4
19
A
ASP
134
A
ASP
164
HELX_P
A
ARG
147
A
ARG
177
1
5
14
A
GLU
153
A
GLU
183
HELX_P
A
LEU
180
A
LEU
210
1
6
28
A
SER
196
A
SER
226
HELX_P
A
GLY
217
A
GLY
247
1
7
22
A
ILE
235
A
ILE
265
HELX_P
A
GLU
256
A
GLU
286
1
8
22
A
PHE
338
A
PHE
368
HELX_P
A
LEU
350
A
LEU
380
1
9
13
metalc
2.439
A
ASN
249
A
OD1
ASN
279
1_555
A
MG
402
C
MG
MG
1_555
metalc
2.816
A
VAL
298
A
O
VAL
328
1_555
A
K
403
D
K
K
1_555
metalc
2.824
A
ASP
300
A
O
ASP
330
1_555
A
K
403
D
K
K
1_555
metalc
2.769
A
PHE
303
A
O
PHE
333
1_555
A
K
403
D
K
K
1_555
metalc
2.915
A
GLY
337
A
O
GLY
367
1_555
A
K
403
D
K
K
1_555
metalc
2.026
A
ADP
401
B
O2A
ADP
1_555
A
MG
402
C
MG
MG
1_555
metalc
2.231
A
ADP
401
B
O2B
ADP
1_555
A
MG
402
C
MG
MG
1_555
metalc
2.741
A
ADP
401
B
O1A
ADP
1_555
A
K
403
D
K
K
1_555
metalc
2.196
A
MG
402
C
MG
MG
1_555
A
HOH
501
G
O
HOH
1_555
metalc
2.069
A
MG
402
C
MG
MG
1_555
A
HOH
502
G
O
HOH
1_555
TRANSFERASE/TRANSFERASE INHIBITOR
GHKL protein kinase, Allosteric kinase inhibitor, Branched-chain alpha-ketoacid, Branched-chain amino acids, Maple syrup urine disease, Diabetes and obesity, Bergerat nucleotide-binding fold, protein kinase, TRANSFERASE-TRANSFERASE INHIBITOR complex
BCKD_RAT
UNP
1
1
Q00972
MILTSVLGSGPRSGSSLWPLLGSSLSLRVRSTSATDTHHVELARERSKTVTSFYNQSAIDVVAEKPSVRLTPTMMLYSGR
SQDGSHLLKSGRYLQQELPVRIAHRIKGFRSLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADEAQYCQLVRQLLD
DHKDVVTLLAEGLRESRKHIEDEKLVRYFLDKTLTSRLGIRMLATHHLALHEDKPDFVGIICTRLSPKKIIEKWVDFARR
LCEHKYGNAPRVRINGHVAARFPFIPMPLDYILPELLKNAMRATMESHLDTPYNVPDVVITIANNDVDLIIRISDRGGGI
AHKDLDRVMDYHFTTAEASTQDPRISPLFGHLDMHSGGQSGPMHGFGFGLPTSRAYAEYLGGSLQLQSLQGIGTDVYLRL
RHIDGREESFRI
1
412
3VAD
-29
382
Q00972
A
1
1
412
1
ILE
engineered mutation
PHE
170
3VAD
A
Q00972
UNP
200
200
1
expression tag
HIS
383
3VAD
A
Q00972
UNP
413
1
expression tag
HIS
384
3VAD
A
Q00972
UNP
414
1
expression tag
HIS
385
3VAD
A
Q00972
UNP
415
1
expression tag
HIS
386
3VAD
A
Q00972
UNP
416
1
expression tag
HIS
387
3VAD
A
Q00972
UNP
417
1
expression tag
HIS
388
3VAD
A
Q00972
UNP
418
2
3
5
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
A
ARG
39
A
ARG
69
A
LEU
40
A
LEU
70
A
MET
45
A
MET
75
A
LEU
46
A
LEU
76
A
PHE
187
A
PHE
217
A
VAL
188
A
VAL
218
A
ILE
191
A
ILE
221
A
LEU
195
A
LEU
225
A
PHE
232
A
PHE
262
A
PHE
234
A
PHE
264
A
VAL
222
A
VAL
252
A
GLY
226
A
GLY
256
A
VAL
268
A
VAL
298
A
ASN
274
A
ASN
304
A
ASP
278
A
ASP
308
A
ASP
285
A
ASP
315
A
GLY
363
A
GLY
393
A
ARG
371
A
ARG
401
A
SER
353
A
SER
383
A
LEU
359
A
LEU
389
BINDING SITE FOR RESIDUE ADP A 401
A
ADP
401
Software
20
BINDING SITE FOR RESIDUE MG A 402
A
MG
402
Software
4
BINDING SITE FOR RESIDUE K A 403
A
K
403
Software
6
BINDING SITE FOR RESIDUE 0F1 A 404
A
0F1
404
Software
11
BINDING SITE FOR RESIDUE 0F1 A 405
A
0F1
405
Software
9
A
ASN
249
A
ASN
279
20
1_555
A
ARG
252
A
ARG
282
20
1_555
A
ALA
253
A
ALA
283
20
1_555
A
ASP
285
A
ASP
315
20
1_555
A
GLY
289
A
GLY
319
20
1_555
A
ILE
290
A
ILE
320
20
1_555
A
VAL
298
A
VAL
328
20
1_555
A
THR
304
A
THR
334
20
1_555
A
THR
305
A
THR
335
20
1_555
A
GLY
335
A
GLY
365
20
1_555
A
PHE
336
A
PHE
366
20
1_555
A
GLY
337
A
GLY
367
20
1_555
A
GLY
339
A
GLY
369
20
1_555
A
LEU
340
A
LEU
370
20
1_555
A
PRO
341
A
PRO
371
20
1_555
A
THR
364
A
THR
394
20
1_555
A
MG
402
C
MG
20
1_555
A
K
403
D
K
20
1_555
A
HOH
501
G
HOH
20
1_555
A
HOH
502
G
HOH
20
1_555
A
ASN
249
A
ASN
279
4
1_555
A
ADP
401
B
ADP
4
1_555
A
HOH
501
G
HOH
4
1_555
A
HOH
502
G
HOH
4
1_555
A
VAL
298
A
VAL
328
6
1_555
A
ASP
300
A
ASP
330
6
1_555
A
PHE
303
A
PHE
333
6
1_555
A
GLY
337
A
GLY
367
6
1_555
A
PRO
341
A
PRO
371
6
1_555
A
ADP
401
B
ADP
6
1_555
A
LEU
68
A
LEU
98
11
1_555
A
ILE
72
A
ILE
102
11
1_555
A
TYR
99
A
TYR
129
11
1_555
A
VAL
125
A
VAL
155
11
1_555
A
LEU
128
A
LEU
158
11
1_555
A
LEU
129
A
LEU
159
11
1_555
A
HIS
132
A
HIS
162
11
1_555
A
ARG
167
A
ARG
197
11
1_555
A
PHE
170
A
PHE
200
11
1_555
A
ARG
171
A
ARG
201
11
1_555
A
0F1
405
F
0F1
11
1_555
A
ARG
71
A
ARG
101
9
1_555
A
ILE
72
A
ILE
102
9
1_555
A
ARG
75
A
ARG
105
9
1_555
A
TYR
99
A
TYR
129
9
1_555
A
HIS
132
A
HIS
162
9
1_555
A
SER
166
A
SER
196
9
1_555
A
ARG
167
A
ARG
197
9
1_555
A
PHE
170
A
PHE
200
9
1_555
A
0F1
404
E
0F1
9
1_555
94
P 42 21 2