0.039968
0.000000
0.004837
0.000000
0.021580
0.000000
0.000000
0.000000
0.035631
0.00000
0.00000
0.00000
Chartron, J.W.
Vandervelde, D.G.
Rao, M.
Clemons Jr., W.M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
96.90
90.00
25.020
46.340
28.270
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
O4 P -3
94.971
PHOSPHATE ION
non-polymer
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
S
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
C
N
80
N
C
N
81
N
O
N
82
N
N
N
83
N
O
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
N
N
95
S
C
N
96
N
C
N
97
N
O
N
98
N
C
N
99
N
C
N
100
N
C
N
101
N
O
N
102
N
O
N
103
N
O
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
N
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
O
N
124
N
H
N
125
N
H
N
126
N
N
N
127
S
C
N
128
N
C
N
129
N
O
N
130
S
C
N
131
N
C
N
132
N
C
N
133
N
C
N
134
N
O
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
N
N
149
S
C
N
150
N
C
N
151
N
O
N
152
N
C
N
153
N
C
N
154
N
C
N
155
N
C
N
156
N
O
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
N
N
171
S
C
N
172
N
C
N
173
N
O
N
174
N
C
N
175
N
C
N
176
N
C
N
177
N
C
N
178
N
N
N
179
N
O
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
N
N
196
S
C
N
197
N
C
N
198
N
O
N
199
N
C
N
200
N
C
N
201
N
S
N
202
N
C
N
203
N
O
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
N
N
216
S
C
N
217
N
C
N
218
N
O
N
219
N
C
Y
220
N
C
Y
221
N
C
Y
222
N
C
Y
223
N
C
Y
224
N
C
Y
225
N
C
N
226
N
O
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
P
N
239
N
O
N
240
N
O
N
241
N
O
N
242
N
O
N
243
N
N
N
244
S
C
N
245
N
C
N
246
N
O
N
247
N
C
N
248
N
C
N
249
N
C
N
250
N
O
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
N
N
261
S
C
N
262
N
C
N
263
N
O
N
264
N
C
N
265
N
O
N
266
N
O
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
N
N
275
S
C
N
276
N
C
N
277
N
O
N
278
R
C
N
279
N
O
N
280
N
C
N
281
N
O
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
N
N
292
S
C
N
293
N
C
N
294
N
O
N
295
N
C
Y
296
N
C
Y
297
N
C
Y
298
N
C
Y
299
N
N
Y
300
N
C
Y
301
N
C
Y
302
N
C
Y
303
N
C
Y
304
N
C
N
305
N
O
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
N
N
319
S
C
N
320
N
C
N
321
N
O
N
322
N
C
N
323
N
C
N
324
N
C
N
325
N
O
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
doub
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
doub
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
doub
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
doub
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
doub
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
Y
214
N
doub
Y
215
N
sing
Y
216
N
sing
N
217
N
sing
Y
218
N
doub
N
219
N
sing
Y
220
N
doub
N
221
N
sing
Y
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
doub
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
doub
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
doub
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
doub
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
Y
287
N
doub
Y
288
N
sing
Y
289
N
sing
N
290
N
sing
Y
291
N
doub
Y
292
N
sing
Y
293
N
sing
N
294
N
sing
Y
295
N
sing
Y
296
N
doub
N
297
N
sing
Y
298
N
doub
N
299
N
sing
Y
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
doub
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
287
8310
8317
10.1074/jbc.M111.333252
22262836
Get5 Carboxyl-terminal Domain Is a Novel Dimerization Motif That Tethers an Extended Get4/Get5 Complex.
2012
10.2210/pdb3vej/pdb
pdb_00003vej
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
PIXEL
2011-01-01
DECTRIS PILATUS 6M
Liquid nitrogen-cooled double crystal
SINGLE WAVELENGTH
M
x-ray
1
1.000
1.0
BL12-2
SSRL
1.000
SYNCHROTRON
SSRL BEAMLINE BL12-2
4734.325
Ubiquitin-like protein MDY2
carboxyl domain residues 175-212
2
man
polymer
94.971
PHOSPHATE ION
1
syn
non-polymer
18.015
water
86
nat
water
Golgi to ER traffic protein 5, Mating-deficient protein 2, Translation machinery-associated protein 24
no
no
SVDLTVPWDDIEALLKNNFENDQAAVRQVMERLQKGWSLAK
SVDLTVPWDDIEALLKNNFENDQAAVRQVMERLQKGWSLAK
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Baker's yeast
ATCC 204508 / S288c
sample
GET5, MDY2, TMA24, YOL111C
559292
Saccharomyces cerevisiae
469008
Escherichia coli
BL21(DE3)Star
plasmid
pET-33b
1
1.72
28.42
VAPOR DIFFUSION, SITTING DROP
5.0
3.4 M ammonium sulfate, 0.1 M sodium citrate, pH 5.0, VAPOR DIFFUSION, SITTING DROP, temperature 298K
298
chem_comp_atom
chem_comp_bond
database_2
struct_ref_seq_dif
struct_site
repository
Initial release
Database references
Data collection
Database references
Derived calculations
1
0
2012-01-25
1
1
2012-03-28
1
2
2024-02-28
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Solution structure of the S. cerevisiae homolog
RCSB
Y
RCSB
2012-01-08
REL
REL
PO4
PHOSPHATE ION
HOH
water
PO4
1
2
PO4
PO4
301
B
HOH
1
3
HOH
HOH
301
A
HOH
5
3
HOH
HOH
302
A
HOH
6
3
HOH
HOH
303
A
HOH
8
3
HOH
HOH
304
A
HOH
9
3
HOH
HOH
305
A
HOH
10
3
HOH
HOH
306
A
HOH
12
3
HOH
HOH
307
A
HOH
16
3
HOH
HOH
308
A
HOH
19
3
HOH
HOH
309
A
HOH
21
3
HOH
HOH
310
A
HOH
22
3
HOH
HOH
311
A
HOH
24
3
HOH
HOH
312
A
HOH
26
3
HOH
HOH
313
A
HOH
27
3
HOH
HOH
314
A
HOH
28
3
HOH
HOH
315
A
HOH
29
3
HOH
HOH
316
A
HOH
33
3
HOH
HOH
317
A
HOH
34
3
HOH
HOH
318
A
HOH
35
3
HOH
HOH
319
A
HOH
38
3
HOH
HOH
320
A
HOH
39
3
HOH
HOH
321
A
HOH
47
3
HOH
HOH
322
A
HOH
48
3
HOH
HOH
323
A
HOH
53
3
HOH
HOH
324
A
HOH
55
3
HOH
HOH
325
A
HOH
58
3
HOH
HOH
326
A
HOH
61
3
HOH
HOH
327
A
HOH
62
3
HOH
HOH
328
A
HOH
63
3
HOH
HOH
329
A
HOH
64
3
HOH
HOH
330
A
HOH
65
3
HOH
HOH
331
A
HOH
66
3
HOH
HOH
332
A
HOH
68
3
HOH
HOH
333
A
HOH
69
3
HOH
HOH
334
A
HOH
70
3
HOH
HOH
335
A
HOH
71
3
HOH
HOH
336
A
HOH
73
3
HOH
HOH
337
A
HOH
74
3
HOH
HOH
338
A
HOH
75
3
HOH
HOH
339
A
HOH
76
3
HOH
HOH
340
A
HOH
77
3
HOH
HOH
341
A
HOH
78
3
HOH
HOH
342
A
HOH
79
3
HOH
HOH
343
A
HOH
80
3
HOH
HOH
344
A
HOH
82
3
HOH
HOH
345
A
HOH
83
3
HOH
HOH
346
A
HOH
84
3
HOH
HOH
347
A
HOH
85
3
HOH
HOH
348
A
HOH
2
3
HOH
HOH
401
B
HOH
3
3
HOH
HOH
402
B
HOH
4
3
HOH
HOH
403
B
HOH
7
3
HOH
HOH
404
B
HOH
11
3
HOH
HOH
405
B
HOH
13
3
HOH
HOH
406
B
HOH
14
3
HOH
HOH
407
B
HOH
15
3
HOH
HOH
408
B
HOH
17
3
HOH
HOH
409
B
HOH
18
3
HOH
HOH
410
B
HOH
20
3
HOH
HOH
411
B
HOH
23
3
HOH
HOH
412
B
HOH
25
3
HOH
HOH
413
B
HOH
30
3
HOH
HOH
414
B
HOH
31
3
HOH
HOH
415
B
HOH
32
3
HOH
HOH
416
B
HOH
36
3
HOH
HOH
417
B
HOH
37
3
HOH
HOH
418
B
HOH
40
3
HOH
HOH
419
B
HOH
41
3
HOH
HOH
420
B
HOH
42
3
HOH
HOH
421
B
HOH
43
3
HOH
HOH
422
B
HOH
44
3
HOH
HOH
423
B
HOH
45
3
HOH
HOH
424
B
HOH
46
3
HOH
HOH
425
B
HOH
49
3
HOH
HOH
426
B
HOH
50
3
HOH
HOH
427
B
HOH
51
3
HOH
HOH
428
B
HOH
52
3
HOH
HOH
429
B
HOH
54
3
HOH
HOH
430
B
HOH
56
3
HOH
HOH
431
B
HOH
57
3
HOH
HOH
432
B
HOH
59
3
HOH
HOH
433
B
HOH
60
3
HOH
HOH
434
B
HOH
67
3
HOH
HOH
435
B
HOH
72
3
HOH
HOH
436
B
HOH
81
3
HOH
HOH
437
B
HOH
86
3
HOH
HOH
438
B
n
1
172
A
VAL
173
n
2
VAL
173
A
ASP
174
n
3
ASP
174
A
LEU
175
n
4
LEU
175
A
THR
176
n
5
THR
176
A
VAL
177
n
6
VAL
177
A
PRO
178
n
7
PRO
178
A
TRP
179
n
8
TRP
179
A
ASP
180
n
9
ASP
180
A
ASP
181
n
10
ASP
181
A
ILE
182
n
11
ILE
182
A
GLU
183
n
12
GLU
183
A
ALA
184
n
13
ALA
184
A
LEU
185
n
14
LEU
185
A
LEU
186
n
15
LEU
186
A
LYS
187
n
16
LYS
187
A
ASN
188
n
17
ASN
188
A
ASN
189
n
18
ASN
189
A
PHE
190
n
19
PHE
190
A
GLU
191
n
20
GLU
191
A
ASN
192
n
21
ASN
192
A
ASP
193
n
22
ASP
193
A
GLN
194
n
23
GLN
194
A
ALA
195
n
24
ALA
195
A
ALA
196
n
25
ALA
196
A
VAL
197
n
26
VAL
197
A
ARG
198
n
27
ARG
198
A
GLN
199
n
28
GLN
199
A
VAL
200
n
29
VAL
200
A
MET
201
n
30
MET
201
A
GLU
202
n
31
GLU
202
A
ARG
203
n
32
ARG
203
A
LEU
204
n
33
LEU
204
A
GLN
205
n
34
GLN
205
A
LYS
206
n
35
LYS
206
A
GLY
207
n
36
GLY
207
A
TRP
208
n
37
TRP
208
A
SER
209
n
38
SER
209
A
LEU
210
n
39
LEU
210
A
ALA
211
n
40
ALA
211
A
LYS
212
n
41
LYS
212
A
SER
172
n
1
SER
172
B
VAL
173
n
2
VAL
173
B
ASP
174
n
3
ASP
174
B
LEU
175
n
4
LEU
175
B
THR
176
n
5
THR
176
B
VAL
177
n
6
VAL
177
B
PRO
178
n
7
PRO
178
B
TRP
179
n
8
TRP
179
B
ASP
180
n
9
ASP
180
B
ASP
181
n
10
ASP
181
B
ILE
182
n
11
ILE
182
B
GLU
183
n
12
GLU
183
B
ALA
184
n
13
ALA
184
B
LEU
185
n
14
LEU
185
B
LEU
186
n
15
LEU
186
B
LYS
187
n
16
LYS
187
B
ASN
188
n
17
ASN
188
B
ASN
189
n
18
ASN
189
B
PHE
190
n
19
PHE
190
B
GLU
191
n
20
GLU
191
B
ASN
192
n
21
ASN
192
B
ASP
193
n
22
ASP
193
B
GLN
194
n
23
GLN
194
B
ALA
195
n
24
ALA
195
B
ALA
196
n
25
ALA
196
B
VAL
197
n
26
VAL
197
B
ARG
198
n
27
ARG
198
B
GLN
199
n
28
GLN
199
B
VAL
200
n
29
VAL
200
B
MET
201
n
30
MET
201
B
GLU
202
n
31
GLU
202
B
ARG
203
n
32
ARG
203
B
LEU
204
n
33
LEU
204
B
GLN
205
n
34
GLN
205
B
LYS
206
n
35
LYS
206
B
GLY
207
n
36
GLY
207
B
TRP
208
n
37
TRP
208
B
SER
209
n
38
SER
209
B
LEU
210
n
39
LEU
210
B
ALA
211
n
40
ALA
211
B
LYS
212
n
41
LYS
212
B
author_and_software_defined_assembly
PISA
2
dimeric
1890
-18
5510
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
B
CB
LYS
212
B
CB
LYS
41
1
Y
1
B
CG
LYS
212
B
CG
LYS
41
1
Y
1
B
CD
LYS
212
B
CD
LYS
41
1
Y
1
B
CE
LYS
212
B
CE
LYS
41
1
Y
1
B
NZ
LYS
212
B
NZ
LYS
41
1
Y
1
A
SER
172
A
SER
1
1
Y
1
A
A
OE1
O
GLU
HOH
202
341
2.15
B
1
B
A
OD1
O
ASP
HOH
174
336
2.18
1_555
1_655
-0.4035
-0.0000
-0.8457
-1.1770
-0.0000
1.5804
0.2039
0.1766
0.1782
1.230
24.839
1089
18274
5.96
97.89
0.20
Random 6%
1
Mixed isotropic and anisotropic
1.39
SAD
20.60
0.86
1.10
ML
FLAT BULK SOLVENT MODEL
37.409
0.394
1.230
24.839
86
746
5
0
655
0.010
740
1.082
1020
13.637
288
0.078
112
0.007
136
0.3587
0.3097
1.2859
141
2084
96.00
0.2723
0.2519
1.3537
121
2161
99.00
0.2431
0.1984
1.4385
116
2153
98.00
0.1914
0.1649
1.5496
135
2202
99.00
0.2000
0.1480
1.7055
153
2114
98.00
0.1714
0.1611
1.9522
154
2140
98.00
0.2108
0.1656
2.4592
134
2155
98.00
0.1870
0.1714
24.8438
135
2176
97.00
11.91
1.23
46.34
3VEJ
18288
-3
0.058
1
11.63
4.2
97.9
0.609
1.23
1.26
2.05
1302
1
3.87
94.6
data collection
Blu-Ice
phasing
SOLVE
refinement
PHENIX
(phenix.refine: 1.7.3_928)
data reduction
XDS
data scaling
XDS
Crystal structure of the Get5 carboxyl domain from S. cerevisiae
1
N
N
1
N
N
2
N
N
3
N
N
3
N
N
The biological assembly is the dimer in the asymmetric unit.
A
PRO
178
A
PRO
7
HELX_P
A
PHE
190
A
PHE
19
1
1
13
A
ASP
193
A
ASP
22
HELX_P
A
ALA
211
A
ALA
40
1
2
19
B
PRO
178
B
PRO
7
HELX_P
B
PHE
190
B
PHE
19
1
3
13
B
ASP
193
B
ASP
22
HELX_P
B
ALA
211
B
ALA
40
1
4
19
PROTEIN BINDING
alpha helical, dimerization, homodimerization, PROTEIN BINDING
MDY2_YEAST
UNP
1
175
Q12285
LTVPWDDIEALLKNNFENDQAAVRQVMERLQKGWSLAK
175
212
3VEJ
175
212
Q12285
A
1
4
41
175
212
3VEJ
175
212
Q12285
B
1
4
41
1
expression tag
SER
172
3VEJ
A
Q12285
UNP
1
1
expression tag
VAL
173
3VEJ
A
Q12285
UNP
2
1
expression tag
ASP
174
3VEJ
A
Q12285
UNP
3
2
expression tag
SER
172
3VEJ
B
Q12285
UNP
1
2
expression tag
VAL
173
3VEJ
B
Q12285
UNP
2
2
expression tag
ASP
174
3VEJ
B
Q12285
UNP
3
BINDING SITE FOR RESIDUE PO4 B 301
B
PO4
301
Software
6
A
ARG
203
A
ARG
32
6
1_455
A
HOH
331
D
HOH
6
1_555
B
ARG
203
B
ARG
32
6
1_555
B
LYS
212
B
LYS
41
6
1_455
B
HOH
433
E
HOH
6
1_555
B
HOH
434
E
HOH
6
1_555
4
P 1 21 1