0.025162
0.000000
0.000000
0.000000
0.011771
0.000000
0.000000
0.000000
0.011144
0.00000
0.00000
0.00000
McLean, L.R.
Zhang, Y.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.000
90.000
90.000
39.743
84.952
89.734
C17 H21 F N6 O2
360.386
3-[5-(5-ethoxy-6-fluoro-1H-benzimidazol-2-yl)-1H-pyrazol-4-yl]-1,1-diethylurea
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
C
N
2
N
C
N
3
N
O
Y
4
N
C
Y
5
N
C
Y
6
N
C
N
7
N
F
Y
8
N
C
Y
9
N
C
Y
10
N
N
Y
11
N
C
Y
12
N
N
Y
13
N
C
Y
14
N
C
Y
15
N
N
Y
16
N
N
Y
17
N
C
Y
18
N
C
N
19
N
N
N
20
N
C
N
21
N
O
N
22
N
N
N
23
N
C
N
24
N
C
N
25
N
C
N
26
N
C
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
N
N
49
S
C
N
50
N
C
N
51
N
O
N
52
N
C
N
53
N
O
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
N
N
62
S
C
N
63
N
C
N
64
N
O
N
65
N
C
N
66
N
C
N
67
N
C
N
68
N
N
N
69
N
C
N
70
N
N
N
71
N
N
N
72
N
O
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
O
N
95
N
N
N
96
N
O
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
N
N
106
S
C
N
107
N
C
N
108
N
O
N
109
N
C
N
110
N
C
N
111
N
O
N
112
N
O
N
113
N
O
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
N
N
122
R
C
N
123
N
C
N
124
N
O
N
125
N
C
N
126
N
S
N
127
N
O
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
N
N
136
S
C
N
137
N
C
N
138
N
O
N
139
N
C
N
140
N
C
N
141
N
C
N
142
N
O
N
143
N
N
N
144
N
O
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
N
N
156
S
C
N
157
N
C
N
158
N
O
N
159
N
C
N
160
N
C
N
161
N
C
N
162
N
O
N
163
N
O
N
164
N
O
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
N
N
175
N
C
N
176
N
C
N
177
N
O
N
178
N
O
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
N
N
185
S
C
N
186
N
C
N
187
N
O
N
188
N
C
Y
189
N
C
Y
190
N
N
Y
191
N
C
Y
192
N
C
Y
193
N
N
N
194
N
O
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
O
N
206
N
H
N
207
N
H
N
208
N
N
N
209
S
C
N
210
N
C
N
211
N
O
N
212
S
C
N
213
N
C
N
214
N
C
N
215
N
C
N
216
N
O
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
C
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
N
N
253
S
C
N
254
N
C
N
255
N
O
N
256
N
C
N
257
N
C
N
258
N
C
N
259
N
C
N
260
N
N
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
N
N
278
S
C
N
279
N
C
N
280
N
O
N
281
N
C
N
282
N
C
N
283
N
S
N
284
N
C
N
285
N
O
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
N
N
298
S
C
N
299
N
C
N
300
N
O
N
301
N
C
Y
302
N
C
Y
303
N
C
Y
304
N
C
Y
305
N
C
Y
306
N
C
Y
307
N
C
N
308
N
O
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
N
N
321
S
C
N
322
N
C
N
323
N
O
N
324
N
C
N
325
N
C
N
326
N
C
N
327
N
O
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
N
N
338
S
C
N
339
N
C
N
340
N
O
N
341
N
C
N
342
N
O
N
343
N
O
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
N
N
352
S
C
N
353
N
C
N
354
N
O
N
355
R
C
N
356
N
O
N
357
N
C
N
358
N
O
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
N
N
369
S
C
N
370
N
C
N
371
N
O
N
372
N
C
Y
373
N
C
Y
374
N
C
Y
375
N
C
Y
376
N
N
Y
377
N
C
Y
378
N
C
Y
379
N
C
Y
380
N
C
Y
381
N
C
N
382
N
O
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
N
N
396
S
C
N
397
N
C
N
398
N
O
N
399
N
C
Y
400
N
C
Y
401
N
C
Y
402
N
C
Y
403
N
C
Y
404
N
C
Y
405
N
C
N
406
N
O
N
407
N
O
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
N
N
420
S
C
N
421
N
C
N
422
N
O
N
423
N
C
N
424
N
C
N
425
N
C
N
426
N
O
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
1
N
sing
Y
2
N
sing
Y
3
N
sing
N
4
N
sing
Y
5
N
doub
Y
6
N
sing
Y
7
N
doub
Y
8
N
doub
Y
9
N
sing
N
10
N
sing
Y
11
N
sing
N
12
N
sing
Y
13
N
doub
Y
14
N
doub
Y
15
N
sing
Y
16
N
sing
N
17
N
sing
Y
18
N
sing
Y
19
N
doub
Y
20
N
sing
N
21
N
sing
N
22
N
doub
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
doub
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
doub
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
doub
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
doub
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
doub
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
doub
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
doub
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
doub
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
doub
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
doub
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
doub
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
doub
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
doub
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
doub
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
Y
189
N
sing
Y
190
N
doub
Y
191
N
doub
N
192
N
sing
Y
193
N
sing
N
194
N
sing
Y
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
doub
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
doub
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
doub
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
doub
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
doub
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
Y
297
N
doub
Y
298
N
sing
Y
299
N
sing
N
300
N
sing
Y
301
N
doub
N
302
N
sing
Y
303
N
doub
N
304
N
sing
Y
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
doub
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
doub
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
doub
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
doub
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
Y
366
N
doub
Y
367
N
sing
Y
368
N
sing
N
369
N
sing
Y
370
N
doub
Y
371
N
sing
Y
372
N
sing
N
373
N
sing
Y
374
N
sing
Y
375
N
doub
N
376
N
sing
Y
377
N
doub
N
378
N
sing
Y
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
doub
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
Y
394
N
doub
Y
395
N
sing
Y
396
N
sing
N
397
N
sing
Y
398
N
doub
N
399
N
sing
Y
400
N
doub
N
401
N
sing
Y
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
doub
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
UK
Bioorg.Med.Chem.Lett.
BMCLE8
1127
0960-894X
22
3296
3300
10.1016/j.bmcl.2012.03.016
22464456
X-ray crystallographic structure-based design of selective thienopyrazole inhibitors for interleukin-2-inducible tyrosine kinase.
2012
10.2210/pdb3vf8/pdb
pdb_00003vf8
1
IMAGE PLATE
2005-05-16
RIGAKU RAXIS IV++
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RUH3R
34880.969
Tyrosine-protein kinase SYK
2.7.10.2
unp residues 343-635
1
man
polymer
360.386
3-[5-(5-ethoxy-6-fluoro-1H-benzimidazol-2-yl)-1H-pyrazol-4-yl]-1,1-diethylurea
1
syn
non-polymer
18.015
water
115
nat
water
Spleen tyrosine kinase
no
no
MDTEVYESPYADPEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEAN
VMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL
VTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT
AMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNHHHHHH
MDTEVYESPYADPEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEAN
VMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL
VTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT
AMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNHHHHHH
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
SYK
9606
Homo sapiens
SF9
7108
Spodoptera frugiperda
PLASMID
pFastBac1
1
2.17
43.35
VAPOR DIFFUSION
4.7
20% PEG3350, 0.1 M Na-citrate, 0.175 M K-phosphate, pH 4.7, VAPOR DIFFUSION, temperature 292K
292
software
chem_comp_atom
chem_comp_bond
database_2
struct_ref_seq_dif
struct_site
repository
Initial release
Refinement description
Data collection
Database references
Derived calculations
1
0
2012-05-02
1
1
2017-11-15
1
2
2024-02-28
_software.name
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2012-01-09
REL
REL
0JE
3-[5-(5-ethoxy-6-fluoro-1H-benzimidazol-2-yl)-1H-pyrazol-4-yl]-1,1-diethylurea
HOH
water
416
1
2
0JE
0JE
701
A
HOH
1
3
HOH
HOH
801
A
HOH
2
3
HOH
HOH
802
A
HOH
3
3
HOH
HOH
803
A
HOH
4
3
HOH
HOH
804
A
HOH
5
3
HOH
HOH
805
A
HOH
6
3
HOH
HOH
806
A
HOH
7
3
HOH
HOH
807
A
HOH
8
3
HOH
HOH
808
A
HOH
9
3
HOH
HOH
809
A
HOH
10
3
HOH
HOH
810
A
HOH
11
3
HOH
HOH
811
A
HOH
12
3
HOH
HOH
812
A
HOH
13
3
HOH
HOH
813
A
HOH
14
3
HOH
HOH
814
A
HOH
15
3
HOH
HOH
815
A
HOH
16
3
HOH
HOH
816
A
HOH
17
3
HOH
HOH
817
A
HOH
18
3
HOH
HOH
818
A
HOH
19
3
HOH
HOH
819
A
HOH
20
3
HOH
HOH
820
A
HOH
21
3
HOH
HOH
821
A
HOH
22
3
HOH
HOH
822
A
HOH
23
3
HOH
HOH
823
A
HOH
24
3
HOH
HOH
824
A
HOH
26
3
HOH
HOH
825
A
HOH
27
3
HOH
HOH
826
A
HOH
28
3
HOH
HOH
827
A
HOH
29
3
HOH
HOH
828
A
HOH
30
3
HOH
HOH
829
A
HOH
32
3
HOH
HOH
830
A
HOH
33
3
HOH
HOH
831
A
HOH
34
3
HOH
HOH
832
A
HOH
35
3
HOH
HOH
833
A
HOH
36
3
HOH
HOH
834
A
HOH
37
3
HOH
HOH
835
A
HOH
38
3
HOH
HOH
836
A
HOH
39
3
HOH
HOH
837
A
HOH
40
3
HOH
HOH
838
A
HOH
41
3
HOH
HOH
839
A
HOH
42
3
HOH
HOH
840
A
HOH
43
3
HOH
HOH
841
A
HOH
44
3
HOH
HOH
842
A
HOH
45
3
HOH
HOH
843
A
HOH
46
3
HOH
HOH
844
A
HOH
47
3
HOH
HOH
845
A
HOH
48
3
HOH
HOH
846
A
HOH
49
3
HOH
HOH
847
A
HOH
50
3
HOH
HOH
848
A
HOH
51
3
HOH
HOH
849
A
HOH
52
3
HOH
HOH
850
A
HOH
53
3
HOH
HOH
851
A
HOH
54
3
HOH
HOH
852
A
HOH
55
3
HOH
HOH
853
A
HOH
56
3
HOH
HOH
854
A
HOH
57
3
HOH
HOH
855
A
HOH
58
3
HOH
HOH
856
A
HOH
59
3
HOH
HOH
857
A
HOH
60
3
HOH
HOH
858
A
HOH
61
3
HOH
HOH
859
A
HOH
62
3
HOH
HOH
860
A
HOH
64
3
HOH
HOH
861
A
HOH
65
3
HOH
HOH
862
A
HOH
66
3
HOH
HOH
863
A
HOH
67
3
HOH
HOH
864
A
HOH
68
3
HOH
HOH
865
A
HOH
69
3
HOH
HOH
866
A
HOH
71
3
HOH
HOH
867
A
HOH
72
3
HOH
HOH
868
A
HOH
73
3
HOH
HOH
869
A
HOH
74
3
HOH
HOH
870
A
HOH
76
3
HOH
HOH
871
A
HOH
77
3
HOH
HOH
872
A
HOH
78
3
HOH
HOH
873
A
HOH
79
3
HOH
HOH
874
A
HOH
80
3
HOH
HOH
875
A
HOH
81
3
HOH
HOH
876
A
HOH
84
3
HOH
HOH
877
A
HOH
85
3
HOH
HOH
878
A
HOH
86
3
HOH
HOH
879
A
HOH
88
3
HOH
HOH
880
A
HOH
89
3
HOH
HOH
881
A
HOH
90
3
HOH
HOH
882
A
HOH
91
3
HOH
HOH
883
A
HOH
92
3
HOH
HOH
884
A
HOH
93
3
HOH
HOH
885
A
HOH
94
3
HOH
HOH
886
A
HOH
96
3
HOH
HOH
887
A
HOH
97
3
HOH
HOH
888
A
HOH
98
3
HOH
HOH
889
A
HOH
99
3
HOH
HOH
890
A
HOH
100
3
HOH
HOH
891
A
HOH
101
3
HOH
HOH
892
A
HOH
104
3
HOH
HOH
893
A
HOH
105
3
HOH
HOH
894
A
HOH
106
3
HOH
HOH
895
A
HOH
107
3
HOH
HOH
896
A
HOH
110
3
HOH
HOH
897
A
HOH
111
3
HOH
HOH
898
A
HOH
112
3
HOH
HOH
899
A
HOH
113
3
HOH
HOH
900
A
HOH
114
3
HOH
HOH
901
A
HOH
115
3
HOH
HOH
902
A
HOH
116
3
HOH
HOH
903
A
HOH
117
3
HOH
HOH
904
A
HOH
118
3
HOH
HOH
905
A
HOH
120
3
HOH
HOH
906
A
HOH
126
3
HOH
HOH
907
A
HOH
128
3
HOH
HOH
908
A
HOH
129
3
HOH
HOH
909
A
HOH
130
3
HOH
HOH
910
A
HOH
131
3
HOH
HOH
911
A
HOH
132
3
HOH
HOH
912
A
HOH
133
3
HOH
HOH
913
A
HOH
134
3
HOH
HOH
914
A
HOH
135
3
HOH
HOH
915
A
n
1
343
A
n
2
344
A
n
3
345
A
n
4
346
A
n
5
347
A
n
6
348
A
n
7
349
A
n
8
350
A
n
9
351
A
n
10
352
A
n
11
353
A
n
12
354
A
n
13
355
A
n
14
356
A
n
15
357
A
n
16
358
A
n
17
359
A
n
18
360
A
n
19
361
A
n
20
362
A
VAL
363
n
21
VAL
363
A
TYR
364
n
22
TYR
364
A
LEU
365
n
23
LEU
365
A
ASP
366
n
24
ASP
366
A
ARG
367
n
25
ARG
367
A
LYS
368
n
26
LYS
368
A
LEU
369
n
27
LEU
369
A
LEU
370
n
28
LEU
370
A
THR
371
n
29
THR
371
A
LEU
372
n
30
LEU
372
A
GLU
373
n
31
GLU
373
A
ASP
374
n
32
ASP
374
A
LYS
375
n
33
LYS
375
A
GLU
376
n
34
GLU
376
A
LEU
377
n
35
LEU
377
A
GLY
378
n
36
GLY
378
A
SER
379
n
37
SER
379
A
GLY
380
n
38
GLY
380
A
ASN
381
n
39
ASN
381
A
PHE
382
n
40
PHE
382
A
GLY
383
n
41
GLY
383
A
THR
384
n
42
THR
384
A
VAL
385
n
43
VAL
385
A
LYS
386
n
44
LYS
386
A
LYS
387
n
45
LYS
387
A
GLY
388
n
46
GLY
388
A
TYR
389
n
47
TYR
389
A
TYR
390
n
48
TYR
390
A
GLN
391
n
49
GLN
391
A
MET
392
n
50
MET
392
A
n
51
393
A
n
52
394
A
VAL
395
n
53
VAL
395
A
VAL
396
n
54
VAL
396
A
LYS
397
n
55
LYS
397
A
THR
398
n
56
THR
398
A
VAL
399
n
57
VAL
399
A
ALA
400
n
58
ALA
400
A
VAL
401
n
59
VAL
401
A
LYS
402
n
60
LYS
402
A
ILE
403
n
61
ILE
403
A
LEU
404
n
62
LEU
404
A
n
63
405
A
n
64
406
A
n
65
407
A
n
66
408
A
n
67
409
A
n
68
410
A
PRO
411
n
69
PRO
411
A
ALA
412
n
70
ALA
412
A
LEU
413
n
71
LEU
413
A
LYS
414
n
72
LYS
414
A
ASP
415
n
73
ASP
415
A
GLU
416
n
74
GLU
416
A
LEU
417
n
75
LEU
417
A
LEU
418
n
76
LEU
418
A
ALA
419
n
77
ALA
419
A
GLU
420
n
78
GLU
420
A
ALA
421
n
79
ALA
421
A
ASN
422
n
80
ASN
422
A
VAL
423
n
81
VAL
423
A
MET
424
n
82
MET
424
A
GLN
425
n
83
GLN
425
A
GLN
426
n
84
GLN
426
A
LEU
427
n
85
LEU
427
A
ASP
428
n
86
ASP
428
A
ASN
429
n
87
ASN
429
A
PRO
430
n
88
PRO
430
A
TYR
431
n
89
TYR
431
A
ILE
432
n
90
ILE
432
A
VAL
433
n
91
VAL
433
A
ARG
434
n
92
ARG
434
A
MET
435
n
93
MET
435
A
ILE
436
n
94
ILE
436
A
GLY
437
n
95
GLY
437
A
ILE
438
n
96
ILE
438
A
CYS
439
n
97
CYS
439
A
GLU
440
n
98
GLU
440
A
ALA
441
n
99
ALA
441
A
GLU
442
n
100
GLU
442
A
SER
443
n
101
SER
443
A
TRP
444
n
102
TRP
444
A
MET
445
n
103
MET
445
A
LEU
446
n
104
LEU
446
A
VAL
447
n
105
VAL
447
A
MET
448
n
106
MET
448
A
GLU
449
n
107
GLU
449
A
MET
450
n
108
MET
450
A
ALA
451
n
109
ALA
451
A
GLU
452
n
110
GLU
452
A
LEU
453
n
111
LEU
453
A
GLY
454
n
112
GLY
454
A
PRO
455
n
113
PRO
455
A
LEU
456
n
114
LEU
456
A
ASN
457
n
115
ASN
457
A
LYS
458
n
116
LYS
458
A
TYR
459
n
117
TYR
459
A
LEU
460
n
118
LEU
460
A
GLN
461
n
119
GLN
461
A
GLN
462
n
120
GLN
462
A
ASN
463
n
121
ASN
463
A
ARG
464
n
122
ARG
464
A
HIS
465
n
123
HIS
465
A
VAL
466
n
124
VAL
466
A
LYS
467
n
125
LYS
467
A
ASP
468
n
126
ASP
468
A
LYS
469
n
127
LYS
469
A
ASN
470
n
128
ASN
470
A
ILE
471
n
129
ILE
471
A
ILE
472
n
130
ILE
472
A
GLU
473
n
131
GLU
473
A
LEU
474
n
132
LEU
474
A
VAL
475
n
133
VAL
475
A
HIS
476
n
134
HIS
476
A
GLN
477
n
135
GLN
477
A
VAL
478
n
136
VAL
478
A
SER
479
n
137
SER
479
A
MET
480
n
138
MET
480
A
GLY
481
n
139
GLY
481
A
MET
482
n
140
MET
482
A
LYS
483
n
141
LYS
483
A
TYR
484
n
142
TYR
484
A
LEU
485
n
143
LEU
485
A
GLU
486
n
144
GLU
486
A
GLU
487
n
145
GLU
487
A
SER
488
n
146
SER
488
A
ASN
489
n
147
ASN
489
A
PHE
490
n
148
PHE
490
A
VAL
491
n
149
VAL
491
A
HIS
492
n
150
HIS
492
A
ARG
493
n
151
ARG
493
A
ASP
494
n
152
ASP
494
A
LEU
495
n
153
LEU
495
A
ALA
496
n
154
ALA
496
A
ALA
497
n
155
ALA
497
A
ARG
498
n
156
ARG
498
A
ASN
499
n
157
ASN
499
A
VAL
500
n
158
VAL
500
A
LEU
501
n
159
LEU
501
A
LEU
502
n
160
LEU
502
A
VAL
503
n
161
VAL
503
A
THR
504
n
162
THR
504
A
GLN
505
n
163
GLN
505
A
HIS
506
n
164
HIS
506
A
TYR
507
n
165
TYR
507
A
ALA
508
n
166
ALA
508
A
LYS
509
n
167
LYS
509
A
ILE
510
n
168
ILE
510
A
SER
511
n
169
SER
511
A
ASP
512
n
170
ASP
512
A
PHE
513
n
171
PHE
513
A
GLY
514
n
172
GLY
514
A
LEU
515
n
173
LEU
515
A
SER
516
n
174
SER
516
A
LYS
517
n
175
LYS
517
A
ALA
518
n
176
ALA
518
A
LEU
519
n
177
LEU
519
A
ARG
520
n
178
ARG
520
A
ALA
521
n
179
ALA
521
A
ASP
522
n
180
ASP
522
A
GLU
523
n
181
GLU
523
A
ASN
524
n
182
ASN
524
A
TYR
525
n
183
TYR
525
A
TYR
526
n
184
TYR
526
A
LYS
527
n
185
LYS
527
A
ALA
528
n
186
ALA
528
A
GLN
529
n
187
GLN
529
A
THR
530
n
188
THR
530
A
HIS
531
n
189
HIS
531
A
GLY
532
n
190
GLY
532
A
LYS
533
n
191
LYS
533
A
TRP
534
n
192
TRP
534
A
PRO
535
n
193
PRO
535
A
VAL
536
n
194
VAL
536
A
LYS
537
n
195
LYS
537
A
TRP
538
n
196
TRP
538
A
TYR
539
n
197
TYR
539
A
ALA
540
n
198
ALA
540
A
PRO
541
n
199
PRO
541
A
GLU
542
n
200
GLU
542
A
CYS
543
n
201
CYS
543
A
ILE
544
n
202
ILE
544
A
ASN
545
n
203
ASN
545
A
TYR
546
n
204
TYR
546
A
TYR
547
n
205
TYR
547
A
LYS
548
n
206
LYS
548
A
PHE
549
n
207
PHE
549
A
SER
550
n
208
SER
550
A
SER
551
n
209
SER
551
A
LYS
552
n
210
LYS
552
A
SER
553
n
211
SER
553
A
ASP
554
n
212
ASP
554
A
VAL
555
n
213
VAL
555
A
TRP
556
n
214
TRP
556
A
SER
557
n
215
SER
557
A
PHE
558
n
216
PHE
558
A
GLY
559
n
217
GLY
559
A
VAL
560
n
218
VAL
560
A
LEU
561
n
219
LEU
561
A
MET
562
n
220
MET
562
A
TRP
563
n
221
TRP
563
A
GLU
564
n
222
GLU
564
A
ALA
565
n
223
ALA
565
A
PHE
566
n
224
PHE
566
A
SER
567
n
225
SER
567
A
TYR
568
n
226
TYR
568
A
GLY
569
n
227
GLY
569
A
GLN
570
n
228
GLN
570
A
LYS
571
n
229
LYS
571
A
PRO
572
n
230
PRO
572
A
TYR
573
n
231
TYR
573
A
ARG
574
n
232
ARG
574
A
GLY
575
n
233
GLY
575
A
MET
576
n
234
MET
576
A
LYS
577
n
235
LYS
577
A
GLY
578
n
236
GLY
578
A
SER
579
n
237
SER
579
A
GLU
580
n
238
GLU
580
A
VAL
581
n
239
VAL
581
A
THR
582
n
240
THR
582
A
ALA
583
n
241
ALA
583
A
MET
584
n
242
MET
584
A
LEU
585
n
243
LEU
585
A
GLU
586
n
244
GLU
586
A
LYS
587
n
245
LYS
587
A
GLY
588
n
246
GLY
588
A
GLU
589
n
247
GLU
589
A
ARG
590
n
248
ARG
590
A
MET
591
n
249
MET
591
A
GLY
592
n
250
GLY
592
A
CYS
593
n
251
CYS
593
A
PRO
594
n
252
PRO
594
A
ALA
595
n
253
ALA
595
A
GLY
596
n
254
GLY
596
A
CYS
597
n
255
CYS
597
A
PRO
598
n
256
PRO
598
A
ARG
599
n
257
ARG
599
A
GLU
600
n
258
GLU
600
A
MET
601
n
259
MET
601
A
TYR
602
n
260
TYR
602
A
ASP
603
n
261
ASP
603
A
LEU
604
n
262
LEU
604
A
MET
605
n
263
MET
605
A
ASN
606
n
264
ASN
606
A
LEU
607
n
265
LEU
607
A
CYS
608
n
266
CYS
608
A
TRP
609
n
267
TRP
609
A
THR
610
n
268
THR
610
A
TYR
611
n
269
TYR
611
A
ASP
612
n
270
ASP
612
A
VAL
613
n
271
VAL
613
A
GLU
614
n
272
GLU
614
A
ASN
615
n
273
ASN
615
A
ARG
616
n
274
ARG
616
A
PRO
617
n
275
PRO
617
A
GLY
618
n
276
GLY
618
A
PHE
619
n
277
PHE
619
A
ALA
620
n
278
ALA
620
A
ALA
621
n
279
ALA
621
A
VAL
622
n
280
VAL
622
A
GLU
623
n
281
GLU
623
A
LEU
624
n
282
LEU
624
A
ARG
625
n
283
ARG
625
A
LEU
626
n
284
LEU
626
A
ARG
627
n
285
ARG
627
A
ASN
628
n
286
ASN
628
A
TYR
629
n
287
TYR
629
A
TYR
630
n
288
TYR
630
A
TYR
631
n
289
TYR
631
A
ASP
632
n
290
ASP
632
A
VAL
633
n
291
VAL
633
A
VAL
634
n
292
VAL
634
A
ASN
635
n
293
ASN
635
A
n
294
636
A
n
295
637
A
n
296
638
A
n
297
639
A
n
298
640
A
n
299
641
A
author_and_software_defined_assembly
PISA
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
GLY
378
A
N
GLY
36
A
O
VAL
385
A
O
VAL
43
A
N
LYS
386
A
N
LYS
44
A
O
VAL
401
A
O
VAL
59
A
N
LYS
402
A
N
LYS
60
A
O
LEU
446
A
O
LEU
104
A
O
VAL
447
A
O
VAL
105
A
N
GLY
437
A
N
GLY
95
A
N
GLY
454
A
N
GLY
112
A
O
LEU
502
A
O
LEU
160
A
N
LEU
501
A
N
LEU
159
A
O
LYS
509
A
O
LYS
167
A
N
VAL
491
A
N
VAL
149
A
O
LYS
517
A
O
LYS
175
A
N
TYR
526
A
N
TYR
184
A
O
PHE
549
A
O
PHE
207
1
A
CG1
VAL
363
A
CG1
VAL
21
1
Y
1
A
CG2
VAL
363
A
CG2
VAL
21
1
Y
1
A
CG
LYS
368
A
CG
LYS
26
1
Y
1
A
CD
LYS
368
A
CD
LYS
26
1
Y
1
A
CE
LYS
368
A
CE
LYS
26
1
Y
1
A
NZ
LYS
368
A
NZ
LYS
26
1
Y
1
A
CG
GLU
373
A
CG
GLU
31
1
Y
1
A
CD
GLU
373
A
CD
GLU
31
1
Y
1
A
OE1
GLU
373
A
OE1
GLU
31
1
Y
1
A
OE2
GLU
373
A
OE2
GLU
31
1
Y
1
A
CG
ASP
374
A
CG
ASP
32
1
Y
1
A
OD1
ASP
374
A
OD1
ASP
32
1
Y
1
A
OD2
ASP
374
A
OD2
ASP
32
1
Y
1
A
CG
LYS
375
A
CG
LYS
33
1
Y
1
A
CD
LYS
375
A
CD
LYS
33
1
Y
1
A
CE
LYS
375
A
CE
LYS
33
1
Y
1
A
NZ
LYS
375
A
NZ
LYS
33
1
Y
1
A
CG
GLU
376
A
CG
GLU
34
1
Y
1
A
CD
GLU
376
A
CD
GLU
34
1
Y
1
A
OE1
GLU
376
A
OE1
GLU
34
1
Y
1
A
OE2
GLU
376
A
OE2
GLU
34
1
Y
1
A
OG
SER
379
A
OG
SER
37
1
Y
1
A
CG
ASN
381
A
CG
ASN
39
1
Y
1
A
OD1
ASN
381
A
OD1
ASN
39
1
Y
1
A
ND2
ASN
381
A
ND2
ASN
39
1
Y
1
A
OG1
THR
384
A
OG1
THR
42
1
Y
1
A
CG2
THR
384
A
CG2
THR
42
1
Y
1
A
CE
LYS
386
A
CE
LYS
44
1
Y
1
A
NZ
LYS
386
A
NZ
LYS
44
1
Y
1
A
CE
LYS
402
A
CE
LYS
60
1
Y
1
A
NZ
LYS
402
A
NZ
LYS
60
1
Y
1
A
CG
LEU
404
A
CG
LEU
62
1
Y
1
A
CD1
LEU
404
A
CD1
LEU
62
1
Y
1
A
CD2
LEU
404
A
CD2
LEU
62
1
Y
1
A
CD1
LEU
413
A
CD1
LEU
71
1
Y
1
A
CD2
LEU
413
A
CD2
LEU
71
1
Y
1
A
CG
LYS
414
A
CG
LYS
72
1
Y
1
A
CD
LYS
414
A
CD
LYS
72
1
Y
1
A
CE
LYS
414
A
CE
LYS
72
1
Y
1
A
NZ
LYS
414
A
NZ
LYS
72
1
Y
1
A
CG
GLN
425
A
CG
GLN
83
1
Y
1
A
CD
GLN
425
A
CD
GLN
83
1
Y
1
A
OE1
GLN
425
A
OE1
GLN
83
1
Y
1
A
NE2
GLN
425
A
NE2
GLN
83
1
Y
1
A
NE
ARG
464
A
NE
ARG
122
1
Y
1
A
CZ
ARG
464
A
CZ
ARG
122
1
Y
1
A
NH1
ARG
464
A
NH1
ARG
122
1
Y
1
A
NH2
ARG
464
A
NH2
ARG
122
1
Y
1
A
CG
HIS
465
A
CG
HIS
123
1
Y
1
A
ND1
HIS
465
A
ND1
HIS
123
1
Y
1
A
CD2
HIS
465
A
CD2
HIS
123
1
Y
1
A
CE1
HIS
465
A
CE1
HIS
123
1
Y
1
A
NE2
HIS
465
A
NE2
HIS
123
1
Y
1
A
CD
LYS
467
A
CD
LYS
125
1
Y
1
A
CE
LYS
467
A
CE
LYS
125
1
Y
1
A
NZ
LYS
467
A
NZ
LYS
125
1
Y
1
A
CD
LYS
469
A
CD
LYS
127
1
Y
1
A
CE
LYS
469
A
CE
LYS
127
1
Y
1
A
NZ
LYS
469
A
NZ
LYS
127
1
Y
1
A
CD
GLU
523
A
CD
GLU
181
1
Y
1
A
OE1
GLU
523
A
OE1
GLU
181
1
Y
1
A
OE2
GLU
523
A
OE2
GLU
181
1
Y
1
A
CG
ASN
524
A
CG
ASN
182
1
Y
1
A
OD1
ASN
524
A
OD1
ASN
182
1
Y
1
A
ND2
ASN
524
A
ND2
ASN
182
1
Y
1
A
CG
GLN
529
A
CG
GLN
187
1
Y
1
A
CD
GLN
529
A
CD
GLN
187
1
Y
1
A
OE1
GLN
529
A
OE1
GLN
187
1
Y
1
A
NE2
GLN
529
A
NE2
GLN
187
1
Y
1
A
CG
HIS
531
A
CG
HIS
189
1
Y
1
A
ND1
HIS
531
A
ND1
HIS
189
1
Y
1
A
CD2
HIS
531
A
CD2
HIS
189
1
Y
1
A
CE1
HIS
531
A
CE1
HIS
189
1
Y
1
A
NE2
HIS
531
A
NE2
HIS
189
1
Y
1
A
CG
LYS
533
A
CG
LYS
191
1
Y
1
A
CD
LYS
533
A
CD
LYS
191
1
Y
1
A
CE
LYS
533
A
CE
LYS
191
1
Y
1
A
NZ
LYS
533
A
NZ
LYS
191
1
Y
1
A
NZ
LYS
548
A
NZ
LYS
206
1
Y
1
A
CG
GLN
570
A
CG
GLN
228
1
Y
1
A
CD
GLN
570
A
CD
GLN
228
1
Y
1
A
OE1
GLN
570
A
OE1
GLN
228
1
Y
1
A
NE2
GLN
570
A
NE2
GLN
228
1
Y
1
A
CG
LYS
571
A
CG
LYS
229
1
Y
1
A
CD
LYS
571
A
CD
LYS
229
1
Y
1
A
CE
LYS
571
A
CE
LYS
229
1
Y
1
A
NZ
LYS
571
A
NZ
LYS
229
1
Y
1
A
CE
LYS
577
A
CE
LYS
235
1
Y
1
A
NZ
LYS
577
A
NZ
LYS
235
1
Y
1
A
NZ
LYS
587
A
NZ
LYS
245
1
Y
1
A
CG
ARG
599
A
CG
ARG
257
1
Y
1
A
CD
ARG
599
A
CD
ARG
257
1
Y
1
A
NE
ARG
599
A
NE
ARG
257
1
Y
1
A
CZ
ARG
599
A
CZ
ARG
257
1
Y
1
A
NH1
ARG
599
A
NH1
ARG
257
1
Y
1
A
NH2
ARG
599
A
NH2
ARG
257
1
Y
1
A
CG
GLU
614
A
CG
GLU
272
1
Y
1
A
CD
GLU
614
A
CD
GLU
272
1
Y
1
A
OE1
GLU
614
A
OE1
GLU
272
1
Y
1
A
OE2
GLU
614
A
OE2
GLU
272
1
Y
1
A
CG
ARG
625
A
CG
ARG
283
1
Y
1
A
CD
ARG
625
A
CD
ARG
283
1
Y
1
A
NE
ARG
625
A
NE
ARG
283
1
Y
1
A
CZ
ARG
625
A
CZ
ARG
283
1
Y
1
A
NH1
ARG
625
A
NH1
ARG
283
1
Y
1
A
NH2
ARG
625
A
NH2
ARG
283
1
Y
1
A
CG
ASN
635
A
CG
ASN
293
1
Y
1
A
OD1
ASN
635
A
OD1
ASN
293
1
Y
1
A
ND2
ASN
635
A
ND2
ASN
293
1
Y
1
A
MET
343
A
MET
1
1
Y
1
A
ASP
344
A
ASP
2
1
Y
1
A
THR
345
A
THR
3
1
Y
1
A
GLU
346
A
GLU
4
1
Y
1
A
VAL
347
A
VAL
5
1
Y
1
A
TYR
348
A
TYR
6
1
Y
1
A
GLU
349
A
GLU
7
1
Y
1
A
SER
350
A
SER
8
1
Y
1
A
PRO
351
A
PRO
9
1
Y
1
A
TYR
352
A
TYR
10
1
Y
1
A
ALA
353
A
ALA
11
1
Y
1
A
ASP
354
A
ASP
12
1
Y
1
A
PRO
355
A
PRO
13
1
Y
1
A
GLU
356
A
GLU
14
1
Y
1
A
GLU
357
A
GLU
15
1
Y
1
A
ILE
358
A
ILE
16
1
Y
1
A
ARG
359
A
ARG
17
1
Y
1
A
PRO
360
A
PRO
18
1
Y
1
A
LYS
361
A
LYS
19
1
Y
1
A
GLU
362
A
GLU
20
1
Y
1
A
LYS
393
A
LYS
51
1
Y
1
A
LYS
394
A
LYS
52
1
Y
1
A
LYS
405
A
LYS
63
1
Y
1
A
ASN
406
A
ASN
64
1
Y
1
A
GLU
407
A
GLU
65
1
Y
1
A
ALA
408
A
ALA
66
1
Y
1
A
ASN
409
A
ASN
67
1
Y
1
A
ASP
410
A
ASP
68
1
Y
1
A
HIS
636
A
HIS
294
1
Y
1
A
HIS
637
A
HIS
295
1
Y
1
A
HIS
638
A
HIS
296
1
Y
1
A
HIS
639
A
HIS
297
1
Y
1
A
HIS
640
A
HIS
298
1
Y
1
A
HIS
641
A
HIS
299
1
Y
1
A
ALA
441
-144.59
-121.41
1
A
ASP
494
-152.16
34.90
1
A
ASP
512
55.16
83.49
1
A
LYS
533
-67.14
90.57
1
A
TRP
609
-88.47
31.98
99.400
33.8971
15.130
0.5635
0.0000
0.0000
7.0467
0.0000
-7.6102
0.2411
0.2153
0.2166
2.0800
20.5400
935
18264
5.1200
96.6700
1.000
1.000
0.2160
RANDOM
1
THROUGHOUT
0.000
MOLECULAR REPLACEMENT
0.286
2.0800
20.5400
115
2186
26
0
2045
693
SINUSOIDAL
2.000
44
HARMONIC
2.000
309
HARMONIC
5.000
2092
HARMONIC
20.000
0
SEMIHARMONIC
5.000
262
SEMIHARMONIC
5.000
2488
SEMIHARMONIC
4.000
0.007
2120
HARMONIC
2.000
0.910
2876
HARMONIC
2.000
2.210
17.510
0.2598
0.2323
0.2339
2.2100
142
2312
2454
9
5.7900
96.6700
2.080
50.000
3VF8
18327
0.101
1.002
1
10.200
6.400
96.400
0.452
2.080
2.150
1380
1.029
1
3.500
75.000
0.409
2.150
2.240
1721
1.023
1
4.600
91.100
0.382
2.240
2.340
1850
1.030
1
5.900
98.700
0.309
2.340
2.470
1845
1.067
1
6.700
99.700
0.258
2.470
2.620
1865
1.116
1
7.100
99.800
0.185
2.620
2.820
1902
1.049
1
7.100
99.900
0.134
2.820
3.110
1890
1.066
1
7.100
100.000
0.094
3.110
3.560
1894
0.914
1
7.100
99.800
0.066
3.560
4.480
1947
0.802
1
7.100
99.500
0.051
4.480
50.000
2033
0.972
1
6.700
99.200
data scaling
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
SCALEPACK
program
phasing
Randy J. Read
cimr-phaser@lists.cam.ac.uk
http://www-structmed.cimr.cam.ac.uk/phaser/
PHASER
program
refinement
Gerard Bricogne
buster-develop@GlobalPhasing.com
http://www.globalphasing.com/buster/
BUSTER-TNT
program
BUSTER 2.9.1
data extraction
PDB
deposit@deposit.rcsb.org
June 10, 2010
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.10
data collection
HKL-2000
data reduction
DENZO
refinement
BUSTER
2.9.1
Crystal Structure of Spleen Tyrosine Kinase Syk Catalytic Domain with Pyrazolylbenzimidazole Inhibitor 416
1
N
N
2
N
N
3
N
N
A
ASP
366
A
ASP
24
HELX_P
A
LYS
368
A
LYS
26
5
1
3
A
ALA
412
A
ALA
70
HELX_P
A
GLN
426
A
GLN
84
1
2
15
A
LEU
456
A
LEU
114
HELX_P
A
ASN
463
A
ASN
121
1
3
8
A
LYS
467
A
LYS
125
HELX_P
A
SER
488
A
SER
146
1
4
22
A
ALA
496
A
ALA
154
HELX_P
A
ARG
498
A
ARG
156
5
5
3
A
PRO
535
A
PRO
193
HELX_P
A
TYR
539
A
TYR
197
5
6
5
A
ALA
540
A
ALA
198
HELX_P
A
TYR
547
A
TYR
205
1
7
8
A
SER
551
A
SER
209
HELX_P
A
SER
567
A
SER
225
1
8
17
A
LYS
577
A
LYS
235
HELX_P
A
LYS
587
A
LYS
245
1
9
11
A
PRO
598
A
PRO
256
HELX_P
A
TRP
609
A
TRP
267
1
10
12
A
GLY
618
A
GLY
276
HELX_P
A
ASN
635
A
ASN
293
1
11
18
TRANSFERASE/TRANSFERASE INHIBITOR
kinase, TRANSFERASE-TRANSFERASE INHIBITOR complex
KSYK_HUMAN
UNP
1
343
P43405
MDTEVYESPYADPEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEAN
VMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL
VTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT
AMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN
343
635
3VF8
343
635
P43405
A
1
1
293
1
expression tag
HIS
636
3VF8
A
P43405
UNP
294
1
expression tag
HIS
637
3VF8
A
P43405
UNP
295
1
expression tag
HIS
638
3VF8
A
P43405
UNP
296
1
expression tag
HIS
639
3VF8
A
P43405
UNP
297
1
expression tag
HIS
640
3VF8
A
P43405
UNP
298
1
expression tag
HIS
641
3VF8
A
P43405
UNP
299
5
3
2
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
LEU
370
A
LEU
28
A
SER
379
A
SER
37
A
THR
384
A
THR
42
A
TYR
390
A
TYR
48
A
LYS
397
A
LYS
55
A
ILE
403
A
ILE
61
A
TRP
444
A
TRP
102
A
GLU
449
A
GLU
107
A
MET
435
A
MET
93
A
GLU
440
A
GLU
98
A
GLY
454
A
GLY
112
A
PRO
455
A
PRO
113
A
VAL
500
A
VAL
158
A
THR
504
A
THR
162
A
TYR
507
A
TYR
165
A
ILE
510
A
ILE
168
A
PHE
490
A
PHE
148
A
VAL
491
A
VAL
149
A
LYS
517
A
LYS
175
A
ALA
518
A
ALA
176
A
TYR
525
A
TYR
183
A
LYS
527
A
LYS
185
A
LYS
548
A
LYS
206
A
SER
550
A
SER
208
BINDING SITE FOR RESIDUE 0JE A 701
A
0JE
701
Software
14
A
LEU
377
A
LEU
35
14
1_555
A
ALA
400
A
ALA
58
14
1_555
A
GLU
449
A
GLU
107
14
1_555
A
MET
450
A
MET
108
14
1_555
A
ALA
451
A
ALA
109
14
1_555
A
GLU
452
A
GLU
110
14
1_555
A
GLY
454
A
GLY
112
14
1_555
A
PRO
455
A
PRO
113
14
1_555
A
ASN
499
A
ASN
157
14
1_555
A
LEU
501
A
LEU
159
14
1_555
A
SER
511
A
SER
169
14
1_555
A
ASP
512
A
ASP
170
14
1_555
A
ASP
612
A
ASP
270
14
3_544
A
HOH
821
C
HOH
14
1_555
19
P 21 21 21