0.020533
0.000000
0.000000
0.000000
0.013843
0.000000
0.000000
0.000000
0.009562
0.00000
0.00000
0.00000
Rondeau, J.M.
Bourgier, E.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
48.702
72.239
104.585
C27 H34 F2 N2 O3 S
504.632
(3R,4S,5S)-3-[(3-tert-butylbenzyl)amino]-5-{[3-(2,2-difluoroethyl)-1H-indol-5-yl]methyl}tetrahydro-2H-thiopyran-4-ol 1,1-dioxide
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
J.Med.Chem.
JMCMAR
0151
0022-2623
55
3364
3386
10.1021/jm300069y
22380629
Discovery of cyclic sulfone hydroxyethylamines as potent and selective beta-site APP-cleaving enzyme 1 (BACE1) inhibitors: structure based design and in vivo reduction of amyloid beta-peptides
2012
UK
Bioorg.Med.Chem.Lett.
BMCLE8
1127
0960-894X
21
1942
1947
10.1016/j.bmcl.2011.02.038
21388807
Structure based design, synthesis and SAR of cyclic hydroxyethylamine (HEA) BACE-1 inhibitors.
2011
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
100
1
mirrors
CCD
2008-01-31
MARMOSAIC 225 mm CCD
SAGITALLY FOCUSED Si(111)
SINGLE WAVELENGTH
M
x-ray
1
1.00161
1.0
X10SA
SLS
1.00161
SYNCHROTRON
SLS BEAMLINE X10SA
44777.336
Beta-secretase 1
3.4.23.46
unp residues 48-447
1
man
polymer
504.632
(3R,4S,5S)-3-[(3-tert-butylbenzyl)amino]-5-{[3-(2,2-difluoroethyl)-1H-indol-5-yl]methyl}tetrahydro-2H-thiopyran-4-ol 1,1-dioxide
1
syn
non-polymer
18.015
water
361
nat
water
Aspartyl protease 2, ASP2, Asp 2, Beta-site amyloid precursor protein cleaving enzyme 1, Beta-site APP cleaving enzyme 1, Memapsin-2, Membrane-associated aspartic protease 2
no
no
GPDEEPEEPGRRGSFVEMVDNLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLHRYYQRQLSSTYRDLR
KGVYVPYTQGKWEGELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQT
HVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDK
SIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITILPQQ
YLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDEFRTAAVEGPFVTLDMEDCGY
NI
GPDEEPEEPGRRGSFVEMVDNLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLHRYYQRQLSSTYRDLR
KGVYVPYTQGKWEGELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQT
HVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDK
SIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITILPQQ
YLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDEFRTAAVEGPFVTLDMEDCGY
NI
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
BACE, BACE1, KIAA1149
9606
Homo sapiens
469008
Escherichia coli
BL21(DE3)
plasmid
pET24
1
2.05
40.13
VAPOR DIFFUSION, HANGING DROP
5.2
15% PEG 1,500, in water, pH 5.2, vapor diffusion, hanging drop, temperature 292K
292
repository
Initial release
1
0
2012-11-21
Compound 3 of primary citation
P2' meta-CF2Me analogue of compound 14b of primary citation
RCSB
Y
RCSB
2012-01-10
REL
REL
0GT
(3R,4S,5S)-3-[(3-tert-butylbenzyl)amino]-5-{[3-(2,2-difluoroethyl)-1H-indol-5-yl]methyl}tetrahydro-2H-thiopyran-4-ol 1,1-dioxide
HOH
water
LIG
1
2
0GT
0GT
401
A
HOH
1
3
HOH
HOH
501
A
HOH
2
3
HOH
HOH
502
A
HOH
3
3
HOH
HOH
503
A
HOH
4
3
HOH
HOH
504
A
HOH
5
3
HOH
HOH
505
A
HOH
6
3
HOH
HOH
506
A
HOH
7
3
HOH
HOH
507
A
HOH
8
3
HOH
HOH
508
A
HOH
9
3
HOH
HOH
509
A
HOH
10
3
HOH
HOH
510
A
HOH
11
3
HOH
HOH
511
A
HOH
12
3
HOH
HOH
512
A
HOH
13
3
HOH
HOH
513
A
HOH
14
3
HOH
HOH
514
A
HOH
15
3
HOH
HOH
515
A
HOH
16
3
HOH
HOH
516
A
HOH
17
3
HOH
HOH
517
A
HOH
18
3
HOH
HOH
518
A
HOH
19
3
HOH
HOH
519
A
HOH
20
3
HOH
HOH
520
A
HOH
21
3
HOH
HOH
521
A
HOH
22
3
HOH
HOH
522
A
HOH
23
3
HOH
HOH
523
A
HOH
24
3
HOH
HOH
524
A
HOH
25
3
HOH
HOH
525
A
HOH
26
3
HOH
HOH
526
A
HOH
27
3
HOH
HOH
527
A
HOH
28
3
HOH
HOH
528
A
HOH
29
3
HOH
HOH
529
A
HOH
30
3
HOH
HOH
530
A
HOH
31
3
HOH
HOH
531
A
HOH
32
3
HOH
HOH
532
A
HOH
33
3
HOH
HOH
533
A
HOH
34
3
HOH
HOH
534
A
HOH
35
3
HOH
HOH
535
A
HOH
36
3
HOH
HOH
536
A
HOH
37
3
HOH
HOH
537
A
HOH
38
3
HOH
HOH
538
A
HOH
39
3
HOH
HOH
539
A
HOH
40
3
HOH
HOH
540
A
HOH
41
3
HOH
HOH
541
A
HOH
42
3
HOH
HOH
542
A
HOH
43
3
HOH
HOH
543
A
HOH
44
3
HOH
HOH
544
A
HOH
45
3
HOH
HOH
545
A
HOH
46
3
HOH
HOH
546
A
HOH
47
3
HOH
HOH
547
A
HOH
48
3
HOH
HOH
548
A
HOH
49
3
HOH
HOH
549
A
HOH
50
3
HOH
HOH
550
A
HOH
51
3
HOH
HOH
551
A
HOH
52
3
HOH
HOH
552
A
HOH
53
3
HOH
HOH
553
A
HOH
54
3
HOH
HOH
554
A
HOH
55
3
HOH
HOH
555
A
HOH
56
3
HOH
HOH
556
A
HOH
57
3
HOH
HOH
557
A
HOH
58
3
HOH
HOH
558
A
HOH
59
3
HOH
HOH
559
A
HOH
60
3
HOH
HOH
560
A
HOH
61
3
HOH
HOH
561
A
HOH
62
3
HOH
HOH
562
A
HOH
63
3
HOH
HOH
563
A
HOH
64
3
HOH
HOH
564
A
HOH
65
3
HOH
HOH
565
A
HOH
66
3
HOH
HOH
566
A
HOH
67
3
HOH
HOH
567
A
HOH
68
3
HOH
HOH
568
A
HOH
69
3
HOH
HOH
569
A
HOH
70
3
HOH
HOH
570
A
HOH
71
3
HOH
HOH
571
A
HOH
72
3
HOH
HOH
572
A
HOH
73
3
HOH
HOH
573
A
HOH
74
3
HOH
HOH
574
A
HOH
75
3
HOH
HOH
575
A
HOH
76
3
HOH
HOH
576
A
HOH
77
3
HOH
HOH
577
A
HOH
78
3
HOH
HOH
578
A
HOH
79
3
HOH
HOH
579
A
HOH
80
3
HOH
HOH
580
A
HOH
81
3
HOH
HOH
581
A
HOH
82
3
HOH
HOH
582
A
HOH
83
3
HOH
HOH
583
A
HOH
84
3
HOH
HOH
584
A
HOH
85
3
HOH
HOH
585
A
HOH
86
3
HOH
HOH
586
A
HOH
87
3
HOH
HOH
587
A
HOH
88
3
HOH
HOH
588
A
HOH
89
3
HOH
HOH
589
A
HOH
90
3
HOH
HOH
590
A
HOH
91
3
HOH
HOH
591
A
HOH
92
3
HOH
HOH
592
A
HOH
93
3
HOH
HOH
593
A
HOH
94
3
HOH
HOH
594
A
HOH
95
3
HOH
HOH
595
A
HOH
96
3
HOH
HOH
596
A
HOH
97
3
HOH
HOH
597
A
HOH
98
3
HOH
HOH
598
A
HOH
99
3
HOH
HOH
599
A
HOH
100
3
HOH
HOH
600
A
HOH
101
3
HOH
HOH
601
A
HOH
102
3
HOH
HOH
602
A
HOH
103
3
HOH
HOH
603
A
HOH
104
3
HOH
HOH
604
A
HOH
105
3
HOH
HOH
605
A
HOH
106
3
HOH
HOH
606
A
HOH
107
3
HOH
HOH
607
A
HOH
108
3
HOH
HOH
608
A
HOH
109
3
HOH
HOH
609
A
HOH
110
3
HOH
HOH
610
A
HOH
111
3
HOH
HOH
611
A
HOH
112
3
HOH
HOH
612
A
HOH
113
3
HOH
HOH
613
A
HOH
114
3
HOH
HOH
614
A
HOH
115
3
HOH
HOH
615
A
HOH
116
3
HOH
HOH
616
A
HOH
117
3
HOH
HOH
617
A
HOH
118
3
HOH
HOH
618
A
HOH
119
3
HOH
HOH
619
A
HOH
120
3
HOH
HOH
620
A
HOH
121
3
HOH
HOH
621
A
HOH
122
3
HOH
HOH
622
A
HOH
123
3
HOH
HOH
623
A
HOH
124
3
HOH
HOH
624
A
HOH
125
3
HOH
HOH
625
A
HOH
126
3
HOH
HOH
626
A
HOH
127
3
HOH
HOH
627
A
HOH
128
3
HOH
HOH
628
A
HOH
129
3
HOH
HOH
629
A
HOH
130
3
HOH
HOH
630
A
HOH
131
3
HOH
HOH
631
A
HOH
132
3
HOH
HOH
632
A
HOH
133
3
HOH
HOH
633
A
HOH
134
3
HOH
HOH
634
A
HOH
135
3
HOH
HOH
635
A
HOH
136
3
HOH
HOH
636
A
HOH
137
3
HOH
HOH
637
A
HOH
138
3
HOH
HOH
638
A
HOH
139
3
HOH
HOH
639
A
HOH
140
3
HOH
HOH
640
A
HOH
141
3
HOH
HOH
641
A
HOH
142
3
HOH
HOH
642
A
HOH
143
3
HOH
HOH
643
A
HOH
144
3
HOH
HOH
644
A
HOH
145
3
HOH
HOH
645
A
HOH
146
3
HOH
HOH
646
A
HOH
147
3
HOH
HOH
647
A
HOH
148
3
HOH
HOH
648
A
HOH
149
3
HOH
HOH
649
A
HOH
150
3
HOH
HOH
650
A
HOH
151
3
HOH
HOH
651
A
HOH
152
3
HOH
HOH
652
A
HOH
153
3
HOH
HOH
653
A
HOH
154
3
HOH
HOH
654
A
HOH
155
3
HOH
HOH
655
A
HOH
156
3
HOH
HOH
656
A
HOH
157
3
HOH
HOH
657
A
HOH
158
3
HOH
HOH
658
A
HOH
159
3
HOH
HOH
659
A
HOH
160
3
HOH
HOH
660
A
HOH
161
3
HOH
HOH
661
A
HOH
162
3
HOH
HOH
662
A
HOH
163
3
HOH
HOH
663
A
HOH
164
3
HOH
HOH
664
A
HOH
165
3
HOH
HOH
665
A
HOH
166
3
HOH
HOH
666
A
HOH
167
3
HOH
HOH
667
A
HOH
168
3
HOH
HOH
668
A
HOH
169
3
HOH
HOH
669
A
HOH
170
3
HOH
HOH
670
A
HOH
171
3
HOH
HOH
671
A
HOH
172
3
HOH
HOH
672
A
HOH
173
3
HOH
HOH
673
A
HOH
174
3
HOH
HOH
674
A
HOH
175
3
HOH
HOH
675
A
HOH
176
3
HOH
HOH
676
A
HOH
177
3
HOH
HOH
677
A
HOH
178
3
HOH
HOH
678
A
HOH
179
3
HOH
HOH
679
A
HOH
180
3
HOH
HOH
680
A
HOH
181
3
HOH
HOH
681
A
HOH
182
3
HOH
HOH
682
A
HOH
183
3
HOH
HOH
683
A
HOH
184
3
HOH
HOH
684
A
HOH
185
3
HOH
HOH
685
A
HOH
186
3
HOH
HOH
686
A
HOH
187
3
HOH
HOH
687
A
HOH
188
3
HOH
HOH
688
A
HOH
189
3
HOH
HOH
689
A
HOH
190
3
HOH
HOH
690
A
HOH
191
3
HOH
HOH
691
A
HOH
192
3
HOH
HOH
692
A
HOH
193
3
HOH
HOH
693
A
HOH
194
3
HOH
HOH
694
A
HOH
195
3
HOH
HOH
695
A
HOH
196
3
HOH
HOH
696
A
HOH
197
3
HOH
HOH
697
A
HOH
198
3
HOH
HOH
698
A
HOH
199
3
HOH
HOH
699
A
HOH
200
3
HOH
HOH
700
A
HOH
201
3
HOH
HOH
701
A
HOH
202
3
HOH
HOH
702
A
HOH
203
3
HOH
HOH
703
A
HOH
204
3
HOH
HOH
704
A
HOH
205
3
HOH
HOH
705
A
HOH
206
3
HOH
HOH
706
A
HOH
207
3
HOH
HOH
707
A
HOH
208
3
HOH
HOH
708
A
HOH
209
3
HOH
HOH
709
A
HOH
210
3
HOH
HOH
710
A
HOH
211
3
HOH
HOH
711
A
HOH
212
3
HOH
HOH
712
A
HOH
213
3
HOH
HOH
713
A
HOH
214
3
HOH
HOH
714
A
HOH
215
3
HOH
HOH
715
A
HOH
216
3
HOH
HOH
716
A
HOH
217
3
HOH
HOH
717
A
HOH
218
3
HOH
HOH
718
A
HOH
219
3
HOH
HOH
719
A
HOH
220
3
HOH
HOH
720
A
HOH
221
3
HOH
HOH
721
A
HOH
222
3
HOH
HOH
722
A
HOH
223
3
HOH
HOH
723
A
HOH
224
3
HOH
HOH
724
A
HOH
225
3
HOH
HOH
725
A
HOH
226
3
HOH
HOH
726
A
HOH
227
3
HOH
HOH
727
A
HOH
228
3
HOH
HOH
728
A
HOH
229
3
HOH
HOH
729
A
HOH
230
3
HOH
HOH
730
A
HOH
231
3
HOH
HOH
731
A
HOH
232
3
HOH
HOH
732
A
HOH
233
3
HOH
HOH
733
A
HOH
234
3
HOH
HOH
734
A
HOH
235
3
HOH
HOH
735
A
HOH
236
3
HOH
HOH
736
A
HOH
237
3
HOH
HOH
737
A
HOH
238
3
HOH
HOH
738
A
HOH
239
3
HOH
HOH
739
A
HOH
240
3
HOH
HOH
740
A
HOH
241
3
HOH
HOH
741
A
HOH
242
3
HOH
HOH
742
A
HOH
243
3
HOH
HOH
743
A
HOH
244
3
HOH
HOH
744
A
HOH
245
3
HOH
HOH
745
A
HOH
246
3
HOH
HOH
746
A
HOH
247
3
HOH
HOH
747
A
HOH
248
3
HOH
HOH
748
A
HOH
249
3
HOH
HOH
749
A
HOH
250
3
HOH
HOH
750
A
HOH
251
3
HOH
HOH
751
A
HOH
252
3
HOH
HOH
752
A
HOH
253
3
HOH
HOH
753
A
HOH
254
3
HOH
HOH
754
A
HOH
255
3
HOH
HOH
755
A
HOH
256
3
HOH
HOH
756
A
HOH
257
3
HOH
HOH
757
A
HOH
258
3
HOH
HOH
758
A
HOH
259
3
HOH
HOH
759
A
HOH
260
3
HOH
HOH
760
A
HOH
261
3
HOH
HOH
761
A
HOH
262
3
HOH
HOH
762
A
HOH
263
3
HOH
HOH
763
A
HOH
264
3
HOH
HOH
764
A
HOH
265
3
HOH
HOH
765
A
HOH
266
3
HOH
HOH
766
A
HOH
267
3
HOH
HOH
767
A
HOH
268
3
HOH
HOH
768
A
HOH
269
3
HOH
HOH
769
A
HOH
270
3
HOH
HOH
770
A
HOH
271
3
HOH
HOH
771
A
HOH
272
3
HOH
HOH
772
A
HOH
273
3
HOH
HOH
773
A
HOH
274
3
HOH
HOH
774
A
HOH
275
3
HOH
HOH
775
A
HOH
276
3
HOH
HOH
776
A
HOH
277
3
HOH
HOH
777
A
HOH
278
3
HOH
HOH
778
A
HOH
279
3
HOH
HOH
779
A
HOH
280
3
HOH
HOH
780
A
HOH
281
3
HOH
HOH
781
A
HOH
282
3
HOH
HOH
782
A
HOH
283
3
HOH
HOH
783
A
HOH
284
3
HOH
HOH
784
A
HOH
285
3
HOH
HOH
785
A
HOH
286
3
HOH
HOH
786
A
HOH
287
3
HOH
HOH
787
A
HOH
288
3
HOH
HOH
788
A
HOH
289
3
HOH
HOH
789
A
HOH
290
3
HOH
HOH
790
A
HOH
291
3
HOH
HOH
791
A
HOH
292
3
HOH
HOH
792
A
HOH
293
3
HOH
HOH
793
A
HOH
294
3
HOH
HOH
794
A
HOH
295
3
HOH
HOH
795
A
HOH
296
3
HOH
HOH
796
A
HOH
297
3
HOH
HOH
797
A
HOH
298
3
HOH
HOH
798
A
HOH
299
3
HOH
HOH
799
A
HOH
300
3
HOH
HOH
800
A
HOH
301
3
HOH
HOH
801
A
HOH
302
3
HOH
HOH
802
A
HOH
303
3
HOH
HOH
803
A
HOH
304
3
HOH
HOH
804
A
HOH
305
3
HOH
HOH
805
A
HOH
306
3
HOH
HOH
806
A
HOH
307
3
HOH
HOH
807
A
HOH
308
3
HOH
HOH
808
A
HOH
309
3
HOH
HOH
809
A
HOH
310
3
HOH
HOH
810
A
HOH
311
3
HOH
HOH
811
A
HOH
312
3
HOH
HOH
812
A
HOH
313
3
HOH
HOH
813
A
HOH
314
3
HOH
HOH
814
A
HOH
315
3
HOH
HOH
815
A
HOH
316
3
HOH
HOH
816
A
HOH
317
3
HOH
HOH
817
A
HOH
318
3
HOH
HOH
818
A
HOH
319
3
HOH
HOH
819
A
HOH
320
3
HOH
HOH
820
A
HOH
321
3
HOH
HOH
821
A
HOH
322
3
HOH
HOH
822
A
HOH
323
3
HOH
HOH
823
A
HOH
324
3
HOH
HOH
824
A
HOH
325
3
HOH
HOH
825
A
HOH
326
3
HOH
HOH
826
A
HOH
327
3
HOH
HOH
827
A
HOH
328
3
HOH
HOH
828
A
HOH
329
3
HOH
HOH
829
A
HOH
330
3
HOH
HOH
830
A
HOH
331
3
HOH
HOH
831
A
HOH
332
3
HOH
HOH
832
A
HOH
333
3
HOH
HOH
833
A
HOH
334
3
HOH
HOH
834
A
HOH
335
3
HOH
HOH
835
A
HOH
336
3
HOH
HOH
836
A
HOH
337
3
HOH
HOH
837
A
HOH
338
3
HOH
HOH
838
A
HOH
339
3
HOH
HOH
839
A
HOH
340
3
HOH
HOH
840
A
HOH
341
3
HOH
HOH
841
A
HOH
342
3
HOH
HOH
842
A
HOH
343
3
HOH
HOH
843
A
HOH
344
3
HOH
HOH
844
A
HOH
345
3
HOH
HOH
845
A
HOH
346
3
HOH
HOH
846
A
HOH
347
3
HOH
HOH
847
A
HOH
348
3
HOH
HOH
848
A
HOH
349
3
HOH
HOH
849
A
HOH
350
3
HOH
HOH
850
A
HOH
351
3
HOH
HOH
851
A
HOH
352
3
HOH
HOH
852
A
HOH
353
3
HOH
HOH
853
A
HOH
354
3
HOH
HOH
854
A
HOH
355
3
HOH
HOH
855
A
HOH
356
3
HOH
HOH
856
A
HOH
357
3
HOH
HOH
857
A
HOH
358
3
HOH
HOH
858
A
HOH
359
3
HOH
HOH
859
A
HOH
360
3
HOH
HOH
860
A
HOH
361
3
HOH
HOH
861
A
n
1
-15
A
n
2
-14
A
n
3
-13
A
n
4
-12
A
n
5
-11
A
n
6
-10
A
n
7
-9
A
n
8
-8
A
n
9
-7
A
n
10
-6
A
n
11
-5
A
n
12
-4
A
n
13
-3
A
SER
46
n
14
SER
-2
A
PHE
47
n
15
PHE
-1
A
VAL
48
n
16
VAL
0
A
GLU
1
n
17
GLU
1
A
MET
2
n
18
MET
2
A
VAL
3
n
19
VAL
3
A
ASP
4
n
20
ASP
4
A
ASN
5
n
21
ASN
5
A
LEU
6
n
22
LEU
6
A
ARG
7
n
23
ARG
7
A
GLY
8
n
24
GLY
8
A
LYS
9
n
25
LYS
9
A
SER
10
n
26
SER
10
A
GLY
11
n
27
GLY
11
A
GLN
12
n
28
GLN
12
A
GLY
13
n
29
GLY
13
A
TYR
14
n
30
TYR
14
A
TYR
15
n
31
TYR
15
A
VAL
16
n
32
VAL
16
A
GLU
17
n
33
GLU
17
A
MET
18
n
34
MET
18
A
THR
19
n
35
THR
19
A
VAL
20
n
36
VAL
20
A
GLY
21
n
37
GLY
21
A
SER
22
n
38
SER
22
A
PRO
23
n
39
PRO
23
A
PRO
24
n
40
PRO
24
A
GLN
25
n
41
GLN
25
A
THR
26
n
42
THR
26
A
LEU
27
n
43
LEU
27
A
ASN
28
n
44
ASN
28
A
ILE
29
n
45
ILE
29
A
LEU
30
n
46
LEU
30
A
VAL
31
n
47
VAL
31
A
ASP
32
n
48
ASP
32
A
THR
33
n
49
THR
33
A
GLY
34
n
50
GLY
34
A
SER
35
n
51
SER
35
A
SER
36
n
52
SER
36
A
ASN
37
n
53
ASN
37
A
PHE
38
n
54
PHE
38
A
ALA
39
n
55
ALA
39
A
VAL
40
n
56
VAL
40
A
GLY
41
n
57
GLY
41
A
ALA
42
n
58
ALA
42
A
ALA
43
n
59
ALA
43
A
PRO
44
n
60
PRO
44
A
HIS
45
n
61
HIS
45
A
PRO
46
n
62
PRO
46
A
PHE
47
n
63
PHE
47
A
LEU
48
n
64
LEU
48
A
HIS
49
n
65
HIS
49
A
ARG
50
n
66
ARG
50
A
TYR
51
n
67
TYR
51
A
TYR
52
n
68
TYR
52
A
GLN
53
n
69
GLN
53
A
ARG
54
n
70
ARG
54
A
GLN
55
n
71
GLN
55
A
LEU
56
n
72
LEU
56
A
SER
57
n
73
SER
57
A
SER
58
n
74
SER
58
A
THR
59
n
75
THR
59
A
TYR
60
n
76
TYR
60
A
ARG
61
n
77
ARG
61
A
ASP
62
n
78
ASP
62
A
LEU
63
n
79
LEU
63
A
ARG
64
n
80
ARG
64
A
LYS
65
n
81
LYS
65
A
GLY
66
n
82
GLY
66
A
VAL
67
n
83
VAL
67
A
TYR
68
n
84
TYR
68
A
VAL
69
n
85
VAL
69
A
PRO
70
n
86
PRO
70
A
TYR
71
n
87
TYR
71
A
THR
72
n
88
THR
72
A
GLN
73
n
89
GLN
73
A
GLY
74
n
90
GLY
74
A
LYS
75
n
91
LYS
75
A
TRP
76
n
92
TRP
76
A
GLU
77
n
93
GLU
77
A
GLY
78
n
94
GLY
78
A
GLU
79
n
95
GLU
79
A
LEU
80
n
96
LEU
80
A
GLY
81
n
97
GLY
81
A
THR
82
n
98
THR
82
A
ASP
83
n
99
ASP
83
A
LEU
84
n
100
LEU
84
A
VAL
85
n
101
VAL
85
A
SER
86
n
102
SER
86
A
ILE
87
n
103
ILE
87
A
PRO
88
n
104
PRO
88
A
HIS
89
n
105
HIS
89
A
GLY
90
n
106
GLY
90
A
PRO
91
n
107
PRO
91
A
ASN
92
n
108
ASN
92
A
VAL
93
n
109
VAL
93
A
THR
94
n
110
THR
94
A
VAL
95
n
111
VAL
95
A
ARG
96
n
112
ARG
96
A
ALA
97
n
113
ALA
97
A
ASN
98
n
114
ASN
98
A
ILE
99
n
115
ILE
99
A
ALA
100
n
116
ALA
100
A
ALA
101
n
117
ALA
101
A
ILE
102
n
118
ILE
102
A
THR
103
n
119
THR
103
A
GLU
104
n
120
GLU
104
A
SER
105
n
121
SER
105
A
ASP
106
n
122
ASP
106
A
LYS
107
n
123
LYS
107
A
PHE
108
n
124
PHE
108
A
PHE
109
n
125
PHE
109
A
ILE
110
n
126
ILE
110
A
ASN
111
n
127
ASN
111
A
GLY
112
n
128
GLY
112
A
SER
113
n
129
SER
113
A
ASN
114
n
130
ASN
114
A
TRP
115
n
131
TRP
115
A
GLU
116
n
132
GLU
116
A
GLY
117
n
133
GLY
117
A
ILE
118
n
134
ILE
118
A
LEU
119
n
135
LEU
119
A
GLY
120
n
136
GLY
120
A
LEU
121
n
137
LEU
121
A
ALA
122
n
138
ALA
122
A
TYR
123
n
139
TYR
123
A
ALA
124
n
140
ALA
124
A
GLU
125
n
141
GLU
125
A
ILE
126
n
142
ILE
126
A
ALA
127
n
143
ALA
127
A
ARG
128
n
144
ARG
128
A
PRO
129
n
145
PRO
129
A
ASP
130
n
146
ASP
130
A
ASP
131
n
147
ASP
131
A
SER
132
n
148
SER
132
A
LEU
133
n
149
LEU
133
A
GLU
134
n
150
GLU
134
A
PRO
135
n
151
PRO
135
A
PHE
136
n
152
PHE
136
A
PHE
137
n
153
PHE
137
A
ASP
138
n
154
ASP
138
A
SER
139
n
155
SER
139
A
LEU
140
n
156
LEU
140
A
VAL
141
n
157
VAL
141
A
LYS
142
n
158
LYS
142
A
GLN
143
n
159
GLN
143
A
THR
144
n
160
THR
144
A
HIS
145
n
161
HIS
145
A
VAL
146
n
162
VAL
146
A
PRO
147
n
163
PRO
147
A
ASN
148
n
164
ASN
148
A
LEU
149
n
165
LEU
149
A
PHE
150
n
166
PHE
150
A
SER
151
n
167
SER
151
A
LEU
152
n
168
LEU
152
A
GLN
153
n
169
GLN
153
A
LEU
154
n
170
LEU
154
A
CYS
155
n
171
CYS
155
A
GLY
156
n
172
GLY
156
A
ALA
157
n
173
ALA
157
A
n
174
A
157
A
n
175
B
157
A
n
176
C
157
A
n
177
D
157
A
n
178
E
157
A
n
179
F
157
A
n
180
G
157
A
n
181
H
157
A
n
182
I
157
A
n
183
J
157
A
n
184
K
157
A
n
185
L
157
A
VAL
170
n
186
VAL
158
A
GLY
171
n
187
GLY
159
A
GLY
172
n
188
GLY
160
A
SER
173
n
189
SER
161
A
MET
174
n
190
MET
162
A
ILE
175
n
191
ILE
163
A
ILE
176
n
192
ILE
164
A
GLY
177
n
193
GLY
165
A
GLY
178
n
194
GLY
166
A
ILE
179
n
195
ILE
167
A
ASP
180
n
196
ASP
168
A
HIS
181
n
197
HIS
169
A
SER
182
n
198
SER
170
A
LEU
183
n
199
LEU
171
A
TYR
184
n
200
TYR
172
A
THR
185
n
201
THR
173
A
GLY
186
n
202
GLY
174
A
SER
187
n
203
SER
175
A
LEU
188
n
204
LEU
176
A
TRP
189
n
205
TRP
177
A
TYR
190
n
206
TYR
178
A
THR
191
n
207
THR
179
A
PRO
192
n
208
PRO
180
A
ILE
193
n
209
ILE
181
A
ARG
194
n
210
ARG
182
A
ARG
195
n
211
ARG
183
A
GLU
196
n
212
GLU
184
A
TRP
197
n
213
TRP
185
A
TYR
198
n
214
TYR
186
A
TYR
199
n
215
TYR
187
A
GLU
200
n
216
GLU
188
A
VAL
201
n
217
VAL
189
A
ILE
202
n
218
ILE
190
A
ILE
203
n
219
ILE
191
A
VAL
204
n
220
VAL
192
A
ARG
205
n
221
ARG
193
A
VAL
206
n
222
VAL
194
A
GLU
207
n
223
GLU
195
A
ILE
208
n
224
ILE
196
A
ASN
209
n
225
ASN
197
A
GLY
210
n
226
GLY
198
A
GLN
211
n
227
GLN
199
A
ASP
212
n
228
ASP
200
A
LEU
213
n
229
LEU
201
A
LYS
214
n
230
LYS
202
A
MET
215
n
231
MET
203
A
ASP
216
n
232
ASP
204
A
CYS
217
n
233
CYS
205
A
LYS
218
n
234
LYS
206
A
GLU
219
n
235
GLU
207
A
TYR
220
n
236
TYR
208
A
ASN
221
n
237
ASN
209
A
TYR
222
n
238
TYR
210
A
ASP
223
n
239
ASP
211
A
LYS
224
n
240
LYS
212
A
SER
225
n
241
SER
213
A
ILE
226
n
242
ILE
214
A
VAL
227
n
243
VAL
215
A
ASP
228
n
244
ASP
216
A
SER
229
n
245
SER
217
A
GLY
230
n
246
GLY
218
A
THR
231
n
247
THR
219
A
THR
232
n
248
THR
220
A
ASN
233
n
249
ASN
221
A
LEU
234
n
250
LEU
222
A
ARG
235
n
251
ARG
223
A
LEU
236
n
252
LEU
224
A
PRO
237
n
253
PRO
225
A
LYS
238
n
254
LYS
226
A
LYS
239
n
255
LYS
227
A
VAL
240
n
256
VAL
228
A
PHE
241
n
257
PHE
229
A
GLU
242
n
258
GLU
230
A
ALA
243
n
259
ALA
231
A
ALA
244
n
260
ALA
232
A
VAL
245
n
261
VAL
233
A
LYS
246
n
262
LYS
234
A
SER
247
n
263
SER
235
A
ILE
248
n
264
ILE
236
A
LYS
249
n
265
LYS
237
A
ALA
250
n
266
ALA
238
A
ALA
251
n
267
ALA
239
A
SER
252
n
268
SER
240
A
SER
253
n
269
SER
241
A
THR
254
n
270
THR
242
A
GLU
255
n
271
GLU
243
A
LYS
256
n
272
LYS
244
A
PHE
257
n
273
PHE
245
A
PRO
258
n
274
PRO
246
A
ASP
259
n
275
ASP
247
A
GLY
260
n
276
GLY
248
A
PHE
261
n
277
PHE
249
A
TRP
262
n
278
TRP
250
A
LEU
263
n
279
LEU
251
A
GLY
264
n
280
GLY
252
A
GLU
265
n
281
GLU
253
A
GLN
266
n
282
GLN
254
A
LEU
267
n
283
LEU
255
A
VAL
268
n
284
VAL
256
A
CYS
269
n
285
CYS
257
A
TRP
270
n
286
TRP
258
A
GLN
271
n
287
GLN
259
A
ALA
272
n
288
ALA
260
A
GLY
273
n
289
GLY
261
A
THR
274
n
290
THR
262
A
THR
275
n
291
THR
263
A
PRO
276
n
292
PRO
264
A
TRP
277
n
293
TRP
265
A
ASN
278
n
294
ASN
266
A
ILE
279
n
295
ILE
267
A
PHE
280
n
296
PHE
268
A
PRO
281
n
297
PRO
269
A
VAL
282
n
298
VAL
270
A
ILE
283
n
299
ILE
271
A
SER
284
n
300
SER
272
A
LEU
285
n
301
LEU
273
A
TYR
286
n
302
TYR
274
A
LEU
287
n
303
LEU
275
A
MET
288
n
304
MET
276
A
GLY
289
n
305
GLY
277
A
GLU
290
n
306
GLU
278
A
VAL
291
n
307
VAL
279
A
THR
292
n
308
THR
280
A
ASN
293
n
309
ASN
281
A
GLN
294
n
310
GLN
282
A
SER
295
n
311
SER
283
A
PHE
296
n
312
PHE
284
A
ARG
297
n
313
ARG
285
A
ILE
298
n
314
ILE
286
A
THR
299
n
315
THR
287
A
ILE
300
n
316
ILE
288
A
LEU
301
n
317
LEU
289
A
PRO
302
n
318
PRO
290
A
GLN
303
n
319
GLN
291
A
GLN
304
n
320
GLN
292
A
TYR
305
n
321
TYR
293
A
LEU
306
n
322
LEU
294
A
ARG
307
n
323
ARG
295
A
PRO
308
n
324
PRO
296
A
VAL
309
n
325
VAL
297
A
GLU
310
n
326
GLU
298
A
ASP
311
n
327
ASP
299
A
VAL
312
n
328
VAL
300
A
ALA
313
n
329
ALA
301
A
THR
314
n
330
THR
302
A
SER
315
n
331
SER
303
A
GLN
316
n
332
GLN
304
A
ASP
317
n
333
ASP
305
A
ASP
318
n
334
ASP
306
A
CYS
319
n
335
CYS
307
A
TYR
320
n
336
TYR
308
A
LYS
321
n
337
LYS
309
A
PHE
322
n
338
PHE
310
A
ALA
323
n
339
ALA
311
A
ILE
324
n
340
ILE
312
A
SER
325
n
341
SER
313
A
GLN
326
n
342
GLN
314
A
SER
327
n
343
SER
315
A
SER
328
n
344
SER
316
A
THR
329
n
345
THR
317
A
GLY
330
n
346
GLY
318
A
THR
331
n
347
THR
319
A
VAL
332
n
348
VAL
320
A
MET
333
n
349
MET
321
A
GLY
334
n
350
GLY
322
A
ALA
335
n
351
ALA
323
A
VAL
336
n
352
VAL
324
A
ILE
337
n
353
ILE
325
A
MET
338
n
354
MET
326
A
GLU
339
n
355
GLU
327
A
GLY
340
n
356
GLY
328
A
PHE
341
n
357
PHE
329
A
TYR
342
n
358
TYR
330
A
VAL
343
n
359
VAL
331
A
VAL
344
n
360
VAL
332
A
PHE
345
n
361
PHE
333
A
ASP
346
n
362
ASP
334
A
ARG
347
n
363
ARG
335
A
ALA
348
n
364
ALA
336
A
ARG
349
n
365
ARG
337
A
LYS
350
n
366
LYS
338
A
ARG
351
n
367
ARG
339
A
ILE
352
n
368
ILE
340
A
GLY
353
n
369
GLY
341
A
PHE
354
n
370
PHE
342
A
ALA
355
n
371
ALA
343
A
VAL
356
n
372
VAL
344
A
SER
357
n
373
SER
345
A
ALA
358
n
374
ALA
346
A
CYS
359
n
375
CYS
347
A
HIS
360
n
376
HIS
348
A
VAL
361
n
377
VAL
349
A
HIS
362
n
378
HIS
350
A
ASP
363
n
379
ASP
351
A
GLU
364
n
380
GLU
352
A
PHE
365
n
381
PHE
353
A
ARG
366
n
382
ARG
354
A
THR
367
n
383
THR
355
A
ALA
368
n
384
ALA
356
A
ALA
369
n
385
ALA
357
A
VAL
370
n
386
VAL
358
A
GLU
371
n
387
GLU
359
A
GLY
372
n
388
GLY
360
A
PRO
373
n
389
PRO
361
A
PHE
374
n
390
PHE
362
A
VAL
375
n
391
VAL
363
A
THR
376
n
392
THR
364
A
LEU
377
n
393
LEU
365
A
ASP
378
n
394
ASP
366
A
MET
379
n
395
MET
367
A
GLU
380
n
396
GLU
368
A
ASP
381
n
397
ASP
369
A
CYS
382
n
398
CYS
370
A
GLY
383
n
399
GLY
371
A
TYR
384
n
400
TYR
372
A
ASN
385
n
401
ASN
373
A
n
402
374
A
author_and_software_defined_assembly
PISA
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
LYS
65
A
N
LYS
81
A
O
LEU
80
A
O
LEU
96
A
O
SER
86
A
O
SER
102
A
N
THR
19
A
N
THR
35
A
O
TYR
15
A
O
TYR
31
A
N
ARG
7
A
N
ARG
23
A
N
LEU
6
A
N
LEU
22
A
O
GLY
160
A
O
GLY
188
A
O
SER
161
A
O
SER
189
A
N
GLN
153
A
N
GLN
169
A
N
PHE
150
A
N
PHE
166
A
O
PHE
333
A
O
PHE
361
A
N
TYR
330
A
N
TYR
358
A
O
ALA
343
A
O
ALA
371
A
O
PHE
342
A
O
PHE
370
A
N
TRP
177
A
N
TRP
205
A
N
LYS
65
A
N
LYS
81
A
O
LEU
80
A
O
LEU
96
A
N
VAL
85
A
N
VAL
101
A
O
VAL
95
A
O
VAL
111
A
O
ILE
102
A
O
ILE
118
A
N
VAL
40
A
N
VAL
56
A
N
ALA
39
A
N
ALA
55
A
O
ILE
118
A
O
ILE
134
A
O
LEU
119
A
O
LEU
135
A
N
LEU
30
A
N
LEU
46
A
O
LEU
27
A
O
LEU
43
A
N
MET
18
A
N
MET
34
A
O
TYR
15
A
O
TYR
31
A
N
ARG
7
A
N
ARG
23
A
N
LEU
6
A
N
LEU
22
A
O
GLY
160
A
O
GLY
188
A
O
SER
161
A
O
SER
189
A
N
GLN
153
A
N
GLN
169
A
N
PHE
150
A
N
PHE
166
A
O
PHE
333
A
O
PHE
361
A
N
TYR
330
A
N
TYR
358
A
O
ALA
343
A
O
ALA
371
A
O
PHE
342
A
O
PHE
370
A
N
TRP
177
A
N
TRP
205
A
N
VAL
189
A
N
VAL
217
A
O
SER
213
A
O
SER
241
A
N
ILE
214
A
N
ILE
242
A
O
MET
321
A
O
MET
349
A
O
VAL
320
A
O
VAL
348
A
N
ARG
223
A
N
ARG
251
A
N
LEU
224
A
N
LEU
252
A
O
SER
315
A
O
SER
343
A
O
GLN
199
A
O
GLN
227
A
N
ILE
196
A
N
ILE
224
A
N
ARG
193
A
N
ARG
221
A
O
TYR
274
A
O
TYR
302
A
N
ILE
271
A
N
ILE
299
A
O
ILE
288
A
O
ILE
316
A
N
ARG
285
A
N
ARG
313
A
O
GLU
359
A
O
GLU
387
A
N
VAL
256
A
N
VAL
284
A
O
TYR
308
A
O
TYR
336
A
O
LYS
309
A
O
LYS
337
A
N
ARG
295
A
N
ARG
323
1
A
GLY
-15
A
GLY
1
1
Y
1
A
PRO
-14
A
PRO
2
1
Y
1
A
ASP
-13
A
ASP
3
1
Y
1
A
GLU
-12
A
GLU
4
1
Y
1
A
GLU
-11
A
GLU
5
1
Y
1
A
PRO
-10
A
PRO
6
1
Y
1
A
GLU
-9
A
GLU
7
1
Y
1
A
GLU
-8
A
GLU
8
1
Y
1
A
PRO
-7
A
PRO
9
1
Y
1
A
GLY
-6
A
GLY
10
1
Y
1
A
ARG
-5
A
ARG
11
1
Y
1
A
ARG
-4
A
ARG
12
1
Y
1
A
GLY
-3
A
GLY
13
1
Y
A
1
A
GLY
157
A
GLY
174
1
Y
B
1
A
PHE
157
A
PHE
175
1
Y
C
1
A
PRO
157
A
PRO
176
1
Y
D
1
A
LEU
157
A
LEU
177
1
Y
E
1
A
ASN
157
A
ASN
178
1
Y
F
1
A
GLN
157
A
GLN
179
1
Y
G
1
A
SER
157
A
SER
180
1
Y
H
1
A
GLU
157
A
GLU
181
1
Y
I
1
A
VAL
157
A
VAL
182
1
Y
J
1
A
LEU
157
A
LEU
183
1
Y
K
1
A
ALA
157
A
ALA
184
1
Y
L
1
A
SER
157
A
SER
185
1
Y
1
A
ILE
374
A
ILE
402
1
Y
1
A
A
TRP
TYR
185
186
149.55
1
A
TRP
185
-148.15
-77.24
1
A
SER
240
-98.45
37.48
1
A
ASN
281
59.62
17.16
1
A
CYS
347
-98.20
33.45
1
A
ASP
351
-127.24
-160.52
protein_rep.param
protein.top
water_rep.param
water.top
cis_peptide.param
nvp-bur436.top
nvp-bur436.param
68.570
25.8416
8.770
7.7900
0.0000
0.0000
-1.6600
0.0000
-6.1300
0.2170
0.0050
0.1870
0.188
0.188
1.7700
59.4400
1832
36618
36618
5.0000
99.5000
1.000
0.500
0.8811
RANDOM
1687942.0000
0.0000
1
RESTRAINED
THROUGHOUT
0.000
FOURIER SYNTHESIS
Engh & Huber
FLAT MODEL
45.2271
0.3544
0.220
0.190
5.000
0.180
0.130
1.7700
59.4400
361
3356
35
0
2960
0.004
0.800
27.600
0.620
1.520
1.500
2.400
2.000
2.190
2.000
3.370
2.500
0.2750
0.0160
0.2360
1.8800
299
5695
5994
5994
6
5.0000
99.5000
26.578
1.770
72.14
3VG1
36626
36626
0.00
-3.000
0.068
1
14.420
5.0
99.700
0.433
1.770
1.820
3.460
11335
2892
2892
1
3.92
99.700
0.372
1.820
1.880
3.990
12087
3070
3070
1
3.94
99.700
0.277
1.880
1.950
5.830
15152
3137
3137
1
4.83
99.700
0.211
1.950
2.020
7.810
14512
2715
2715
1
5.35
99.600
0.165
2.020
2.100
9.650
14255
2667
2667
1
5.34
99.900
0.128
2.100
2.180
11.730
12345
2314
2314
1
5.33
99.800
0.109
2.180
2.290
13.510
14230
2664
2664
1
5.34
99.900
0.096
2.290
2.400
14.750
11770
2208
2208
1
5.33
99.900
0.086
2.400
2.540
16.170
12337
2305
2305
1
5.35
100.000
0.077
2.540
2.700
17.440
11128
2090
2090
1
5.32
100.000
0.071
2.700
2.900
19.190
10612
2004
2004
1
5.30
100.000
0.064
2.900
3.160
20.420
9989
1895
1895
1
5.27
100.000
0.053
3.160
3.490
23.420
8918
1699
1699
1
5.25
99.900
0.049
3.490
3.950
26.710
7824
1493
1493
1
5.24
99.600
0.039
3.950
4.660
30.970
6938
1326
1326
1
5.23
99.300
0.035
4.660
5.970
34.050
5752
1119
1119
1
5.14
99.900
0.035
5.970
9.410
34.740
3838
773
773
1
4.97
99.600
0.032
9.410
33.290
1068
255
255
1
4.19
86.400
data scaling
Wolfgang Kabsch
http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html
XSCALE
package
refinement
Axel T. Brunger
axel.brunger@yale.edu
Fortran_77
http://cns-online.org/
CNS
package
data extraction
PDB
deposit@deposit.rcsb.org
June 10, 2010
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.10
data reduction
XDS
phasing
CNX
2002
refinement
CNX
2002
Beta-secretase 1 (E.C.3.4.23.46)
Crystal Structure of Human Beta Secretase in Complex with NVP-BUR436, derived from a soaking experiment
1
N
N
2
N
N
3
N
N
A
GLN
53
A
GLN
69
HELX_P
A
SER
57
A
SER
73
5
1
5
A
TYR
123
A
TYR
139
HELX_P
A
ALA
127
A
ALA
143
5
2
5
A
PRO
135
A
PRO
151
HELX_P
A
THR
144
A
THR
160
1
3
10
A
ASP
168
A
ASP
196
HELX_P
A
SER
170
A
SER
198
5
4
3
A
ASP
204
A
ASP
232
HELX_P
A
TYR
210
A
TYR
238
5
5
7
A
LYS
226
A
LYS
254
HELX_P
A
SER
240
A
SER
268
1
6
15
A
PRO
264
A
PRO
292
HELX_P
A
PHE
268
A
PHE
296
5
7
5
A
LEU
289
A
LEU
317
HELX_P
A
TYR
293
A
TYR
321
1
8
5
A
ASP
299
A
ASP
327
HELX_P
A
SER
303
A
SER
331
5
9
5
A
GLY
322
A
GLY
350
HELX_P
A
GLU
327
A
GLU
355
1
10
6
A
ARG
335
A
ARG
363
HELX_P
A
ARG
337
A
ARG
365
5
11
3
disulf
2.039
A
CYS
155
A
SG
CYS
171
1_555
A
CYS
347
A
SG
CYS
375
1_555
disulf
2.033
A
CYS
205
A
SG
CYS
233
1_555
A
CYS
370
A
SG
CYS
398
1_555
disulf
2.035
A
CYS
257
A
SG
CYS
285
1_555
A
CYS
307
A
SG
CYS
335
1_555
Hydrolase/Hydrolase inhibitor
Beta-Secretase, Memapsin2, Bace1, Aspartic Proteinase, Alzheimer's disease, Enzyme inhibitor complex, Structure-based drug design, Hydrolase-Hydrolase inhibitor complex
A
SER
22
A
SER
38
1
A
PRO
23
A
PRO
39
-5.24
A
ARG
128
A
ARG
144
1
A
PRO
129
A
PRO
145
0.69
A
TYR
210
A
TYR
238
1
A
ASP
211
A
ASP
239
2.69
A
GLY
360
A
GLY
388
1
A
PRO
361
A
PRO
389
1.65
BACE1_HUMAN
UNP
1
48
P56817
DEEPEEPGRRGSFVEMVDNLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLHRYYQRQLSSTYRDLRKG
VYVPYTQGKWEGELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHV
PNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSI
VDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITILPQQYL
RPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDEFRTAAVEGPFVTLDMEDCGYNI
48
447
3VG1
-13
374
P56817
A
1
3
402
1
EXPRESSION TAG
GLY
-15
3VG1
A
P56817
UNP
1
1
EXPRESSION TAG
PRO
-14
3VG1
A
P56817
UNP
2
9
13
5
5
3
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ARG
61
A
ARG
77
A
PRO
70
A
PRO
86
A
LYS
75
A
LYS
91
A
SER
86
A
SER
102
A
TYR
14
A
TYR
30
A
VAL
20
A
VAL
36
A
LEU
6
A
LEU
22
A
GLY
8
A
GLY
24
A
GLY
159
A
GLY
187
A
ILE
164
A
ILE
192
A
PHE
150
A
PHE
166
A
CYS
155
A
CYS
171
A
PHE
329
A
PHE
357
A
ASP
334
A
ASP
362
A
ARG
339
A
ARG
367
A
SER
345
A
SER
373
A
TYR
172
A
TYR
200
A
PRO
180
A
PRO
208
A
ARG
61
A
ARG
77
A
PRO
70
A
PRO
86
A
LYS
75
A
LYS
91
A
SER
86
A
SER
102
A
THR
94
A
THR
110
A
ASP
106
A
ASP
122
A
PHE
38
A
PHE
54
A
GLY
41
A
GLY
57
A
GLY
117
A
GLY
133
A
GLY
120
A
GLY
136
A
GLN
25
A
GLN
41
A
ASP
32
A
ASP
48
A
TYR
14
A
TYR
30
A
VAL
20
A
VAL
36
A
LEU
6
A
LEU
22
A
GLY
8
A
GLY
24
A
GLY
159
A
GLY
187
A
ILE
164
A
ILE
192
A
PHE
150
A
PHE
166
A
CYS
155
A
CYS
171
A
PHE
329
A
PHE
357
A
ASP
334
A
ASP
362
A
ARG
339
A
ARG
367
A
SER
345
A
SER
373
A
TYR
172
A
TYR
200
A
PRO
180
A
PRO
208
A
GLU
188
A
GLU
216
A
VAL
189
A
VAL
217
A
SER
213
A
SER
241
A
VAL
215
A
VAL
243
A
THR
319
A
THR
347
A
MET
321
A
MET
349
A
LEU
222
A
LEU
250
A
PRO
225
A
PRO
253
A
ILE
312
A
ILE
340
A
SER
315
A
SER
343
A
GLN
199
A
GLN
227
A
ASP
200
A
ASP
228
A
ILE
191
A
ILE
219
A
ILE
196
A
ILE
224
A
ILE
271
A
ILE
299
A
MET
276
A
MET
304
A
GLN
282
A
GLN
310
A
ILE
288
A
ILE
316
A
ALA
357
A
ALA
385
A
VAL
363
A
VAL
391
A
VAL
256
A
VAL
284
A
TRP
258
A
TRP
286
A
ASP
306
A
ASP
334
A
PHE
310
A
PHE
338
A
LEU
294
A
LEU
322
A
PRO
296
A
PRO
324
BINDING SITE FOR RESIDUE 0GT A 401
Software
23
A
GLY
11
A
GLY
27
23
1_555
A
GLN
12
A
GLN
28
23
1_555
A
GLY
13
A
GLY
29
23
1_555
A
LEU
30
A
LEU
46
23
1_555
A
ASP
32
A
ASP
48
23
1_555
A
GLY
34
A
GLY
50
23
1_555
A
SER
35
A
SER
51
23
1_555
A
VAL
69
A
VAL
85
23
1_555
A
PRO
70
A
PRO
86
23
1_555
A
TYR
71
A
TYR
87
23
1_555
A
THR
72
A
THR
88
23
1_555
A
GLN
73
A
GLN
89
23
1_555
A
PHE
108
A
PHE
124
23
1_555
A
ILE
110
A
ILE
126
23
1_555
A
TRP
115
A
TRP
131
23
1_555
A
ILE
126
A
ILE
142
23
1_555
A
ASP
216
A
ASP
244
23
1_555
A
GLY
218
A
GLY
246
23
1_555
A
THR
219
A
THR
247
23
1_555
A
THR
220
A
THR
248
23
1_555
A
ARG
223
A
ARG
251
23
1_555
A
HOH
688
C
HOH
23
1_555
A
HOH
821
C
HOH
23
1_555
19
P 21 21 21