0.014743
0.008512
0.000000
-0.000000
0.017024
0.000000
0.000000
-0.000000
0.020547
0.00000
0.00000
0.00000
Wachino, J.
Yamaguchi, Y.
Mori, S.
Arakawa, Y.
Shibayama, K.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
3
90.00
90.00
120.00
67.829
67.829
48.670
C2 H3 O2 -1
59.044
ACETATE ION
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C3 H8 O3
92.094
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Zn 2
65.409
ZINC ION
non-polymer
N
1
N
C
N
2
N
O
N
3
N
O
N
4
N
C
N
5
N
H
N
6
N
H
N
7
N
H
N
8
N
N
N
9
S
C
N
10
N
C
N
11
N
O
N
12
N
C
N
13
N
O
N
14
N
H
N
15
N
H
N
16
N
H
N
17
N
H
N
18
N
H
N
19
N
H
N
20
N
H
N
21
N
N
N
22
S
C
N
23
N
C
N
24
N
O
N
25
N
C
N
26
N
C
N
27
N
C
N
28
N
N
N
29
N
C
N
30
N
N
N
31
N
N
N
32
N
O
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
N
N
49
S
C
N
50
N
C
N
51
N
O
N
52
N
C
N
53
N
C
N
54
N
O
N
55
N
N
N
56
N
O
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
N
N
66
S
C
N
67
N
C
N
68
N
O
N
69
N
C
N
70
N
C
N
71
N
O
N
72
N
O
N
73
N
O
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
N
N
82
R
C
N
83
N
C
N
84
N
O
N
85
N
C
N
86
N
S
N
87
N
O
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
N
N
96
S
C
N
97
N
C
N
98
N
O
N
99
N
C
N
100
N
C
N
101
N
C
N
102
N
O
N
103
N
N
N
104
N
O
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
N
N
116
S
C
N
117
N
C
N
118
N
O
N
119
N
C
N
120
N
C
N
121
N
C
N
122
N
O
N
123
N
O
N
124
N
O
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
N
N
135
N
C
N
136
N
C
N
137
N
O
N
138
N
O
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
C
N
145
N
O
N
146
N
C
N
147
N
O
N
148
N
C
N
149
N
O
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
N
N
159
S
C
N
160
N
C
N
161
N
O
N
162
N
C
Y
163
N
C
Y
164
N
N
Y
165
N
C
Y
166
N
C
Y
167
N
N
N
168
N
O
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
O
N
180
N
H
N
181
N
H
N
182
N
N
N
183
S
C
N
184
N
C
N
185
N
O
N
186
S
C
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
O
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
N
N
205
S
C
N
206
N
C
N
207
N
O
N
208
N
C
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
O
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
N
N
227
S
C
N
228
N
C
N
229
N
O
N
230
N
C
N
231
N
C
N
232
N
C
N
233
N
C
N
234
N
N
N
235
N
O
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
N
N
252
S
C
N
253
N
C
N
254
N
O
N
255
N
C
N
256
N
C
N
257
N
S
N
258
N
C
N
259
N
O
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
N
N
272
S
C
N
273
N
C
N
274
N
O
N
275
N
C
Y
276
N
C
Y
277
N
C
Y
278
N
C
Y
279
N
C
Y
280
N
C
Y
281
N
C
N
282
N
O
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
N
N
295
S
C
N
296
N
C
N
297
N
O
N
298
N
C
N
299
N
C
N
300
N
C
N
301
N
O
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
N
N
312
S
C
N
313
N
C
N
314
N
O
N
315
N
C
N
316
N
O
N
317
N
O
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
S
N
326
N
O
N
327
N
O
N
328
N
O
N
329
N
O
N
330
N
N
N
331
S
C
N
332
N
C
N
333
N
O
N
334
R
C
N
335
N
O
N
336
N
C
N
337
N
O
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
N
N
348
S
C
N
349
N
C
N
350
N
O
N
351
N
C
Y
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
N
Y
356
N
C
Y
357
N
C
Y
358
N
C
Y
359
N
C
Y
360
N
C
N
361
N
O
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
N
N
375
S
C
N
376
N
C
N
377
N
O
N
378
N
C
Y
379
N
C
Y
380
N
C
Y
381
N
C
Y
382
N
C
Y
383
N
C
Y
384
N
C
N
385
N
O
N
386
N
O
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
N
N
399
S
C
N
400
N
C
N
401
N
O
N
402
N
C
N
403
N
C
N
404
N
C
N
405
N
O
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
ZN
N
1
N
doub
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
doub
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
doub
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
doub
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
doub
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
doub
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
doub
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
doub
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
doub
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
doub
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
doub
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
doub
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
doub
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
Y
159
N
sing
Y
160
N
doub
Y
161
N
doub
N
162
N
sing
Y
163
N
sing
N
164
N
sing
Y
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
doub
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
doub
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
doub
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
doub
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
Y
267
N
doub
Y
268
N
sing
Y
269
N
sing
N
270
N
sing
Y
271
N
doub
N
272
N
sing
Y
273
N
doub
N
274
N
sing
Y
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
doub
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
doub
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
doub
N
310
N
doub
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
doub
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
doub
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
Y
340
N
doub
Y
341
N
sing
Y
342
N
sing
N
343
N
sing
Y
344
N
doub
Y
345
N
sing
Y
346
N
sing
N
347
N
sing
Y
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
doub
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
Y
368
N
doub
Y
369
N
sing
Y
370
N
sing
N
371
N
sing
Y
372
N
doub
N
373
N
sing
Y
374
N
doub
N
375
N
sing
Y
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
doub
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
US
Antimicrob.Agents Chemother.
AMACCQ
0788
0066-4804
57
101
109
10.1128/AAC.01264-12
23070156
Structural Insights into the Subclass B3 Metallo-beta-Lactamase SMB-1 and the Mode of Inhibition by the Common Metallo- -Lactamase Inhibitor Mercaptoacetate
2013
10.2210/pdb3vpe/pdb
pdb_00003vpe
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2010-10-16
ADSC QUANTUM 210r
Si(111)
SINGLE WAVELENGTH
M
x-ray
1
1.00000
1.0
BL-5A
Photon Factory
1.00000
SYNCHROTRON
PHOTON FACTORY BEAMLINE BL-5A
27754.043
Metallo-beta-lactamase
3.5.2.6
UNP residues 19-280
1
man
polymer
65.409
ZINC ION
2
syn
non-polymer
96.063
SULFATE ION
3
syn
non-polymer
59.044
ACETATE ION
3
syn
non-polymer
92.094
GLYCEROL
4
syn
non-polymer
18.015
water
277
nat
water
no
no
QDRDWSSPQQPFTIYGNTHYVGTGGISAVLLSSPQGHILVDGTTEKGAQVVAANIRAMGFKLSDVKYILSTHSHEDHAGG
ISAMQKLTGATVLAGAANVDTLRTGVSPKSDPQFGSLSNFPGSAKVRAVADGELVKLGPLAVKAHATPGHTEGGITWTWQ
SCEQGKCKDVVFADSLTAVSADSYRFSDHPEVVASLRGSFEAVEKLSCDIAIAAHPEVNDMWTRQQRAAKEGNSAYVDNG
ACRAIAAAGRKRLETRLASEKR
QDRDWSSPQQPFTIYGNTHYVGTGGISAVLLSSPQGHILVDGTTEKGAQVVAANIRAMGFKLSDVKYILSTHSHEDHAGG
ISAMQKLTGATVLAGAANVDTLRTGVSPKSDPQFGSLSNFPGSAKVRAVADGELVKLGPLAVKAHATPGHTEGGITWTWQ
SCEQGKCKDVVFADSLTAVSADSYRFSDHPEVVASLRGSFEAVEKLSCDIAIAAHPEVNDMWTRQQRAAKEGNSAYVDNG
ACRAIAAAGRKRLETRLASEKR
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
10mdr148
sample
blaSMB-1, SMB-1
615
Serratia marcescens
562
Escherichia coli
BL21(DE3)pLysS
plasmid
pET30a
1
2.33
47.19
VAPOR DIFFUSION, HANGING DROP
5.8
28% PEG 2000, 0.1M sodium acetate, 0.2M ammonium sulfate, pH 5.8, VAPOR DIFFUSION, HANGING DROP, temperature 293K
293
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_struct_conn_angle
struct_conn
struct_site
repository
Initial release
Data collection
Database references
Derived calculations
Refinement description
1
0
2013-02-13
1
1
2023-11-08
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
PDBJ
Y
PDBJ
2012-02-29
REL
REL
ZN
ZINC ION
SO4
SULFATE ION
ACT
ACETATE ION
GOL
GLYCEROL
HOH
water
1SML
PDB ENTRY 1SML
PDB
experimental model
ZN
301
2
ZN
ZN
301
A
ZN
302
2
ZN
ZN
302
A
SO4
401
3
SO4
SO4
303
A
SO4
402
3
SO4
SO4
304
A
SO4
403
3
SO4
SO4
305
A
ACT
501
4
ACT
ACT
306
A
ACT
502
4
ACT
ACT
307
A
ACT
503
4
ACT
ACT
308
A
GOL
601
5
GOL
GOL
309
A
GOL
602
5
GOL
GOL
310
A
GOL
603
5
GOL
GOL
311
A
GOL
604
5
GOL
GOL
312
A
HOH
701
6
HOH
HOH
701
A
HOH
702
6
HOH
HOH
702
A
HOH
703
6
HOH
HOH
703
A
HOH
704
6
HOH
HOH
704
A
HOH
705
6
HOH
HOH
705
A
HOH
706
6
HOH
HOH
706
A
HOH
707
6
HOH
HOH
707
A
HOH
708
6
HOH
HOH
708
A
HOH
709
6
HOH
HOH
709
A
HOH
710
6
HOH
HOH
710
A
HOH
711
6
HOH
HOH
711
A
HOH
713
6
HOH
HOH
712
A
HOH
714
6
HOH
HOH
713
A
HOH
715
6
HOH
HOH
714
A
HOH
716
6
HOH
HOH
715
A
HOH
717
6
HOH
HOH
716
A
HOH
718
6
HOH
HOH
717
A
HOH
720
6
HOH
HOH
718
A
HOH
721
6
HOH
HOH
719
A
HOH
722
6
HOH
HOH
720
A
HOH
723
6
HOH
HOH
721
A
HOH
724
6
HOH
HOH
722
A
HOH
725
6
HOH
HOH
723
A
HOH
726
6
HOH
HOH
724
A
HOH
727
6
HOH
HOH
725
A
HOH
728
6
HOH
HOH
726
A
HOH
729
6
HOH
HOH
727
A
HOH
730
6
HOH
HOH
728
A
HOH
731
6
HOH
HOH
729
A
HOH
732
6
HOH
HOH
730
A
HOH
733
6
HOH
HOH
731
A
HOH
734
6
HOH
HOH
732
A
HOH
735
6
HOH
HOH
733
A
HOH
736
6
HOH
HOH
734
A
HOH
737
6
HOH
HOH
735
A
HOH
738
6
HOH
HOH
736
A
HOH
739
6
HOH
HOH
737
A
HOH
740
6
HOH
HOH
738
A
HOH
741
6
HOH
HOH
739
A
HOH
742
6
HOH
HOH
740
A
HOH
744
6
HOH
HOH
741
A
HOH
745
6
HOH
HOH
742
A
HOH
746
6
HOH
HOH
743
A
HOH
747
6
HOH
HOH
744
A
HOH
748
6
HOH
HOH
745
A
HOH
749
6
HOH
HOH
746
A
HOH
750
6
HOH
HOH
747
A
HOH
751
6
HOH
HOH
748
A
HOH
752
6
HOH
HOH
749
A
HOH
753
6
HOH
HOH
750
A
HOH
754
6
HOH
HOH
751
A
HOH
755
6
HOH
HOH
752
A
HOH
756
6
HOH
HOH
753
A
HOH
757
6
HOH
HOH
754
A
HOH
758
6
HOH
HOH
755
A
HOH
759
6
HOH
HOH
756
A
HOH
761
6
HOH
HOH
757
A
HOH
762
6
HOH
HOH
758
A
HOH
763
6
HOH
HOH
759
A
HOH
764
6
HOH
HOH
760
A
HOH
765
6
HOH
HOH
761
A
HOH
766
6
HOH
HOH
762
A
HOH
767
6
HOH
HOH
763
A
HOH
768
6
HOH
HOH
764
A
HOH
769
6
HOH
HOH
765
A
HOH
770
6
HOH
HOH
766
A
HOH
771
6
HOH
HOH
767
A
HOH
772
6
HOH
HOH
768
A
HOH
773
6
HOH
HOH
769
A
HOH
774
6
HOH
HOH
770
A
HOH
775
6
HOH
HOH
771
A
HOH
776
6
HOH
HOH
772
A
HOH
777
6
HOH
HOH
773
A
HOH
778
6
HOH
HOH
774
A
HOH
779
6
HOH
HOH
775
A
HOH
780
6
HOH
HOH
776
A
HOH
781
6
HOH
HOH
777
A
HOH
782
6
HOH
HOH
778
A
HOH
783
6
HOH
HOH
779
A
HOH
784
6
HOH
HOH
780
A
HOH
785
6
HOH
HOH
781
A
HOH
786
6
HOH
HOH
782
A
HOH
787
6
HOH
HOH
783
A
HOH
788
6
HOH
HOH
784
A
HOH
789
6
HOH
HOH
785
A
HOH
790
6
HOH
HOH
786
A
HOH
791
6
HOH
HOH
787
A
HOH
792
6
HOH
HOH
788
A
HOH
793
6
HOH
HOH
789
A
HOH
794
6
HOH
HOH
790
A
HOH
795
6
HOH
HOH
791
A
HOH
796
6
HOH
HOH
792
A
HOH
797
6
HOH
HOH
793
A
HOH
798
6
HOH
HOH
794
A
HOH
799
6
HOH
HOH
795
A
HOH
800
6
HOH
HOH
796
A
HOH
801
6
HOH
HOH
797
A
HOH
803
6
HOH
HOH
798
A
HOH
804
6
HOH
HOH
799
A
HOH
805
6
HOH
HOH
800
A
HOH
806
6
HOH
HOH
801
A
HOH
807
6
HOH
HOH
802
A
HOH
808
6
HOH
HOH
803
A
HOH
810
6
HOH
HOH
804
A
HOH
811
6
HOH
HOH
805
A
HOH
812
6
HOH
HOH
806
A
HOH
813
6
HOH
HOH
807
A
HOH
814
6
HOH
HOH
808
A
HOH
815
6
HOH
HOH
809
A
HOH
816
6
HOH
HOH
810
A
HOH
817
6
HOH
HOH
811
A
HOH
821
6
HOH
HOH
812
A
HOH
822
6
HOH
HOH
813
A
HOH
824
6
HOH
HOH
814
A
HOH
825
6
HOH
HOH
815
A
HOH
826
6
HOH
HOH
816
A
HOH
827
6
HOH
HOH
817
A
HOH
828
6
HOH
HOH
818
A
HOH
829
6
HOH
HOH
819
A
HOH
830
6
HOH
HOH
820
A
HOH
831
6
HOH
HOH
821
A
HOH
832
6
HOH
HOH
822
A
HOH
833
6
HOH
HOH
823
A
HOH
834
6
HOH
HOH
824
A
HOH
836
6
HOH
HOH
825
A
HOH
838
6
HOH
HOH
826
A
HOH
839
6
HOH
HOH
827
A
HOH
840
6
HOH
HOH
828
A
HOH
841
6
HOH
HOH
829
A
HOH
842
6
HOH
HOH
830
A
HOH
845
6
HOH
HOH
831
A
HOH
846
6
HOH
HOH
832
A
HOH
848
6
HOH
HOH
833
A
HOH
849
6
HOH
HOH
834
A
HOH
850
6
HOH
HOH
835
A
HOH
851
6
HOH
HOH
836
A
HOH
852
6
HOH
HOH
837
A
HOH
853
6
HOH
HOH
838
A
HOH
854
6
HOH
HOH
839
A
HOH
855
6
HOH
HOH
840
A
HOH
858
6
HOH
HOH
841
A
HOH
859
6
HOH
HOH
842
A
HOH
860
6
HOH
HOH
843
A
HOH
861
6
HOH
HOH
844
A
HOH
862
6
HOH
HOH
845
A
HOH
863
6
HOH
HOH
846
A
HOH
864
6
HOH
HOH
847
A
HOH
865
6
HOH
HOH
848
A
HOH
868
6
HOH
HOH
849
A
HOH
869
6
HOH
HOH
850
A
HOH
872
6
HOH
HOH
851
A
HOH
875
6
HOH
HOH
852
A
HOH
877
6
HOH
HOH
853
A
HOH
878
6
HOH
HOH
854
A
HOH
879
6
HOH
HOH
855
A
HOH
880
6
HOH
HOH
856
A
HOH
882
6
HOH
HOH
857
A
HOH
885
6
HOH
HOH
858
A
HOH
886
6
HOH
HOH
859
A
HOH
887
6
HOH
HOH
860
A
HOH
892
6
HOH
HOH
861
A
HOH
896
6
HOH
HOH
862
A
HOH
897
6
HOH
HOH
863
A
HOH
898
6
HOH
HOH
864
A
HOH
901
6
HOH
HOH
865
A
HOH
902
6
HOH
HOH
866
A
HOH
903
6
HOH
HOH
867
A
HOH
904
6
HOH
HOH
868
A
HOH
908
6
HOH
HOH
869
A
HOH
909
6
HOH
HOH
870
A
HOH
910
6
HOH
HOH
871
A
HOH
911
6
HOH
HOH
872
A
HOH
912
6
HOH
HOH
873
A
HOH
913
6
HOH
HOH
874
A
HOH
915
6
HOH
HOH
875
A
HOH
916
6
HOH
HOH
876
A
HOH
917
6
HOH
HOH
877
A
HOH
918
6
HOH
HOH
878
A
HOH
919
6
HOH
HOH
879
A
HOH
923
6
HOH
HOH
880
A
HOH
931
6
HOH
HOH
881
A
HOH
933
6
HOH
HOH
882
A
HOH
934
6
HOH
HOH
883
A
HOH
936
6
HOH
HOH
884
A
HOH
937
6
HOH
HOH
885
A
HOH
938
6
HOH
HOH
886
A
HOH
939
6
HOH
HOH
887
A
HOH
940
6
HOH
HOH
888
A
HOH
941
6
HOH
HOH
889
A
HOH
948
6
HOH
HOH
890
A
HOH
949
6
HOH
HOH
891
A
HOH
950
6
HOH
HOH
892
A
HOH
951
6
HOH
HOH
893
A
HOH
952
6
HOH
HOH
894
A
HOH
953
6
HOH
HOH
895
A
HOH
954
6
HOH
HOH
896
A
HOH
956
6
HOH
HOH
897
A
HOH
957
6
HOH
HOH
898
A
HOH
958
6
HOH
HOH
899
A
HOH
959
6
HOH
HOH
900
A
HOH
960
6
HOH
HOH
901
A
HOH
961
6
HOH
HOH
902
A
HOH
962
6
HOH
HOH
903
A
HOH
963
6
HOH
HOH
904
A
HOH
964
6
HOH
HOH
905
A
HOH
965
6
HOH
HOH
906
A
HOH
966
6
HOH
HOH
907
A
HOH
969
6
HOH
HOH
908
A
HOH
970
6
HOH
HOH
909
A
HOH
971
6
HOH
HOH
910
A
HOH
972
6
HOH
HOH
911
A
HOH
973
6
HOH
HOH
912
A
HOH
974
6
HOH
HOH
913
A
HOH
975
6
HOH
HOH
914
A
HOH
976
6
HOH
HOH
915
A
HOH
977
6
HOH
HOH
916
A
HOH
978
6
HOH
HOH
917
A
HOH
979
6
HOH
HOH
918
A
HOH
980
6
HOH
HOH
919
A
HOH
981
6
HOH
HOH
920
A
HOH
982
6
HOH
HOH
921
A
HOH
983
6
HOH
HOH
922
A
HOH
984
6
HOH
HOH
923
A
HOH
985
6
HOH
HOH
924
A
HOH
986
6
HOH
HOH
925
A
HOH
987
6
HOH
HOH
926
A
HOH
989
6
HOH
HOH
927
A
HOH
990
6
HOH
HOH
928
A
HOH
991
6
HOH
HOH
929
A
HOH
992
6
HOH
HOH
930
A
HOH
993
6
HOH
HOH
931
A
HOH
994
6
HOH
HOH
932
A
HOH
995
6
HOH
HOH
933
A
HOH
996
6
HOH
HOH
934
A
HOH
997
6
HOH
HOH
935
A
HOH
998
6
HOH
HOH
936
A
HOH
1001
6
HOH
HOH
937
A
HOH
1002
6
HOH
HOH
938
A
HOH
1003
6
HOH
HOH
939
A
HOH
1004
6
HOH
HOH
940
A
HOH
1006
6
HOH
HOH
941
A
HOH
1007
6
HOH
HOH
942
A
HOH
1008
6
HOH
HOH
943
A
HOH
1010
6
HOH
HOH
944
A
HOH
1011
6
HOH
HOH
945
A
HOH
1012
6
HOH
HOH
946
A
HOH
1013
6
HOH
HOH
947
A
HOH
1014
6
HOH
HOH
948
A
HOH
1015
6
HOH
HOH
949
A
HOH
1016
6
HOH
HOH
950
A
HOH
1017
6
HOH
HOH
951
A
HOH
1018
6
HOH
HOH
952
A
HOH
1019
6
HOH
HOH
953
A
HOH
1020
6
HOH
HOH
954
A
HOH
1021
6
HOH
HOH
955
A
HOH
1022
6
HOH
HOH
956
A
HOH
1023
6
HOH
HOH
957
A
HOH
1024
6
HOH
HOH
958
A
HOH
1025
6
HOH
HOH
959
A
HOH
1026
6
HOH
HOH
960
A
HOH
1027
6
HOH
HOH
961
A
HOH
1028
6
HOH
HOH
962
A
HOH
1029
6
HOH
HOH
963
A
HOH
1030
6
HOH
HOH
964
A
HOH
1031
6
HOH
HOH
965
A
HOH
1032
6
HOH
HOH
966
A
HOH
1033
6
HOH
HOH
967
A
HOH
1034
6
HOH
HOH
968
A
HOH
1035
6
HOH
HOH
969
A
HOH
1036
6
HOH
HOH
970
A
HOH
1037
6
HOH
HOH
971
A
HOH
1038
6
HOH
HOH
972
A
HOH
1039
6
HOH
HOH
973
A
HOH
1040
6
HOH
HOH
974
A
HOH
1041
6
HOH
HOH
975
A
HOH
1042
6
HOH
HOH
976
A
HOH
1043
6
HOH
HOH
977
A
n
1
1
A
n
2
2
A
ARG
3
n
3
ARG
3
A
ASP
4
n
4
ASP
4
A
TRP
5
n
5
TRP
5
A
SER
6
n
6
SER
6
A
SER
7
n
7
SER
7
A
PRO
8
n
8
PRO
8
A
GLN
9
n
9
GLN
9
A
GLN
10
n
10
GLN
10
A
PRO
11
n
11
PRO
11
A
PHE
12
n
12
PHE
12
A
THR
13
n
13
THR
13
A
ILE
14
n
14
ILE
14
A
TYR
15
n
15
TYR
15
A
GLY
16
n
16
GLY
16
A
ASN
17
n
17
ASN
17
A
THR
18
n
18
THR
18
A
HIS
19
n
19
HIS
19
A
TYR
20
n
20
TYR
20
A
VAL
21
n
21
VAL
21
A
GLY
22
n
22
GLY
22
A
THR
23
n
23
THR
23
A
GLY
24
n
24
GLY
24
A
GLY
25
n
25
GLY
25
A
ILE
26
n
26
ILE
26
A
SER
27
n
27
SER
27
A
ALA
28
n
28
ALA
28
A
VAL
29
n
29
VAL
29
A
LEU
30
n
30
LEU
30
A
LEU
31
n
31
LEU
31
A
SER
32
n
32
SER
32
A
SER
33
n
33
SER
33
A
PRO
34
n
34
PRO
34
A
GLN
35
n
35
GLN
35
A
GLY
36
n
36
GLY
36
A
HIS
37
n
37
HIS
37
A
ILE
38
n
38
ILE
38
A
LEU
39
n
39
LEU
39
A
VAL
40
n
40
VAL
40
A
ASP
41
n
41
ASP
41
A
GLY
42
n
42
GLY
42
A
THR
43
n
43
THR
43
A
THR
44
n
44
THR
44
A
GLU
45
n
45
GLU
45
A
LYS
46
n
46
LYS
46
A
GLY
47
n
47
GLY
47
A
ALA
48
n
48
ALA
48
A
GLN
49
n
49
GLN
49
A
VAL
50
n
50
VAL
50
A
VAL
51
n
51
VAL
51
A
ALA
52
n
52
ALA
52
A
ALA
53
n
53
ALA
53
A
ASN
54
n
54
ASN
54
A
ILE
55
n
55
ILE
55
A
ARG
56
n
56
ARG
56
A
ALA
57
n
57
ALA
57
A
MET
58
n
58
MET
58
A
GLY
59
n
59
GLY
59
A
PHE
60
n
60
PHE
60
A
LYS
61
n
61
LYS
61
A
LEU
62
n
62
LEU
62
A
SER
63
n
63
SER
63
A
ASP
64
n
64
ASP
64
A
VAL
65
n
65
VAL
65
A
LYS
66
n
66
LYS
66
A
TYR
67
n
67
TYR
67
A
ILE
68
n
68
ILE
68
A
LEU
69
n
69
LEU
69
A
SER
70
n
70
SER
70
A
THR
71
n
71
THR
71
A
HIS
72
n
72
HIS
72
A
SER
73
n
73
SER
73
A
HIS
74
n
74
HIS
74
A
GLU
75
n
75
GLU
75
A
ASP
76
n
76
ASP
76
A
HIS
77
n
77
HIS
77
A
ALA
78
n
78
ALA
78
A
GLY
79
n
79
GLY
79
A
GLY
80
n
80
GLY
80
A
ILE
81
n
81
ILE
81
A
SER
82
n
82
SER
82
A
ALA
83
n
83
ALA
83
A
MET
84
n
84
MET
84
A
GLN
85
n
85
GLN
85
A
LYS
86
n
86
LYS
86
A
LEU
87
n
87
LEU
87
A
THR
88
n
88
THR
88
A
GLY
89
n
89
GLY
89
A
ALA
90
n
90
ALA
90
A
THR
91
n
91
THR
91
A
VAL
92
n
92
VAL
92
A
LEU
93
n
93
LEU
93
A
ALA
94
n
94
ALA
94
A
GLY
95
n
95
GLY
95
A
ALA
96
n
96
ALA
96
A
ALA
97
n
97
ALA
97
A
ASN
98
n
98
ASN
98
A
VAL
99
n
99
VAL
99
A
ASP
100
n
100
ASP
100
A
THR
101
n
101
THR
101
A
LEU
102
n
102
LEU
102
A
ARG
103
n
103
ARG
103
A
THR
104
n
104
THR
104
A
GLY
105
n
105
GLY
105
A
VAL
106
n
106
VAL
106
A
SER
107
n
107
SER
107
A
PRO
108
n
108
PRO
108
A
LYS
109
n
109
LYS
109
A
SER
110
n
110
SER
110
A
ASP
111
n
111
ASP
111
A
PRO
112
n
112
PRO
112
A
GLN
113
n
113
GLN
113
A
PHE
114
n
114
PHE
114
A
GLY
115
n
115
GLY
115
A
SER
116
n
116
SER
116
A
LEU
117
n
117
LEU
117
A
SER
118
n
118
SER
118
A
ASN
119
n
119
ASN
119
A
PHE
120
n
120
PHE
120
A
PRO
121
n
121
PRO
121
A
GLY
122
n
122
GLY
122
A
SER
123
n
123
SER
123
A
ALA
124
n
124
ALA
124
A
LYS
125
n
125
LYS
125
A
VAL
126
n
126
VAL
126
A
ARG
127
n
127
ARG
127
A
ALA
128
n
128
ALA
128
A
VAL
129
n
129
VAL
129
A
ALA
130
n
130
ALA
130
A
ASP
131
n
131
ASP
131
A
GLY
132
n
132
GLY
132
A
GLU
133
n
133
GLU
133
A
LEU
134
n
134
LEU
134
A
VAL
135
n
135
VAL
135
A
LYS
136
n
136
LYS
136
A
LEU
137
n
137
LEU
137
A
GLY
138
n
138
GLY
138
A
PRO
139
n
139
PRO
139
A
LEU
140
n
140
LEU
140
A
ALA
141
n
141
ALA
141
A
VAL
142
n
142
VAL
142
A
LYS
143
n
143
LYS
143
A
ALA
144
n
144
ALA
144
A
HIS
145
n
145
HIS
145
A
ALA
146
n
146
ALA
146
A
THR
147
n
147
THR
147
A
PRO
148
n
148
PRO
148
A
GLY
149
n
149
GLY
149
A
HIS
150
n
150
HIS
150
A
THR
151
n
151
THR
151
A
GLU
152
n
152
GLU
152
A
GLY
153
n
153
GLY
153
A
GLY
154
n
154
GLY
154
A
ILE
155
n
155
ILE
155
A
THR
156
n
156
THR
156
A
TRP
157
n
157
TRP
157
A
THR
158
n
158
THR
158
A
TRP
159
n
159
TRP
159
A
GLN
160
n
160
GLN
160
A
SER
161
n
161
SER
161
A
CYS
162
n
162
CYS
162
A
GLU
163
n
163
GLU
163
A
GLN
164
n
164
GLN
164
A
GLY
165
n
165
GLY
165
A
LYS
166
n
166
LYS
166
A
CYS
167
n
167
CYS
167
A
LYS
168
n
168
LYS
168
A
ASP
169
n
169
ASP
169
A
VAL
170
n
170
VAL
170
A
VAL
171
n
171
VAL
171
A
PHE
172
n
172
PHE
172
A
ALA
173
n
173
ALA
173
A
ASP
174
n
174
ASP
174
A
SER
175
n
175
SER
175
A
LEU
176
n
176
LEU
176
A
THR
177
n
177
THR
177
A
ALA
178
n
178
ALA
178
A
VAL
179
n
179
VAL
179
A
SER
180
n
180
SER
180
A
ALA
181
n
181
ALA
181
A
ASP
182
n
182
ASP
182
A
SER
183
n
183
SER
183
A
TYR
184
n
184
TYR
184
A
ARG
185
n
185
ARG
185
A
PHE
186
n
186
PHE
186
A
SER
187
n
187
SER
187
A
ASP
188
n
188
ASP
188
A
HIS
189
n
189
HIS
189
A
PRO
190
n
190
PRO
190
A
GLU
191
n
191
GLU
191
A
VAL
192
n
192
VAL
192
A
VAL
193
n
193
VAL
193
A
ALA
194
n
194
ALA
194
A
SER
195
n
195
SER
195
A
LEU
196
n
196
LEU
196
A
ARG
197
n
197
ARG
197
A
GLY
198
n
198
GLY
198
A
SER
199
n
199
SER
199
A
PHE
200
n
200
PHE
200
A
GLU
201
n
201
GLU
201
A
ALA
202
n
202
ALA
202
A
VAL
203
n
203
VAL
203
A
GLU
204
n
204
GLU
204
A
LYS
205
n
205
LYS
205
A
LEU
206
n
206
LEU
206
A
SER
207
n
207
SER
207
A
CYS
208
n
208
CYS
208
A
ASP
209
n
209
ASP
209
A
ILE
210
n
210
ILE
210
A
ALA
211
n
211
ALA
211
A
ILE
212
n
212
ILE
212
A
ALA
213
n
213
ALA
213
A
ALA
214
n
214
ALA
214
A
HIS
215
n
215
HIS
215
A
PRO
216
n
216
PRO
216
A
GLU
217
n
217
GLU
217
A
VAL
218
n
218
VAL
218
A
ASN
219
n
219
ASN
219
A
ASP
220
n
220
ASP
220
A
MET
221
n
221
MET
221
A
TRP
222
n
222
TRP
222
A
THR
223
n
223
THR
223
A
ARG
224
n
224
ARG
224
A
GLN
225
n
225
GLN
225
A
GLN
226
n
226
GLN
226
A
ARG
227
n
227
ARG
227
A
ALA
228
n
228
ALA
228
A
ALA
229
n
229
ALA
229
A
LYS
230
n
230
LYS
230
A
GLU
231
n
231
GLU
231
A
GLY
232
n
232
GLY
232
A
ASN
233
n
233
ASN
233
A
SER
234
n
234
SER
234
A
ALA
235
n
235
ALA
235
A
TYR
236
n
236
TYR
236
A
VAL
237
n
237
VAL
237
A
ASP
238
n
238
ASP
238
A
ASN
239
n
239
ASN
239
A
GLY
240
n
240
GLY
240
A
ALA
241
n
241
ALA
241
A
CYS
242
n
242
CYS
242
A
ARG
243
n
243
ARG
243
A
ALA
244
n
244
ALA
244
A
ILE
245
n
245
ILE
245
A
ALA
246
n
246
ALA
246
A
ALA
247
n
247
ALA
247
A
ALA
248
n
248
ALA
248
A
GLY
249
n
249
GLY
249
A
ARG
250
n
250
ARG
250
A
LYS
251
n
251
LYS
251
A
ARG
252
n
252
ARG
252
A
LEU
253
n
253
LEU
253
A
GLU
254
n
254
GLU
254
A
THR
255
n
255
THR
255
A
ARG
256
n
256
ARG
256
A
LEU
257
n
257
LEU
257
A
ALA
258
n
258
ALA
258
A
SER
259
n
259
SER
259
A
GLU
260
n
260
GLU
260
A
LYS
261
n
261
LYS
261
A
n
262
262
A
author_and_software_defined_assembly
PISA
1
monomeric
A
HIS
72
A
NE2
HIS
72
1_555
A
ZN
301
B
ZN
ZN
1_555
A
HIS
74
A
ND1
HIS
74
1_555
98.6
A
HIS
72
A
NE2
HIS
72
1_555
A
ZN
301
B
ZN
ZN
1_555
A
HIS
150
A
NE2
HIS
150
1_555
98.6
A
HIS
74
A
ND1
HIS
74
1_555
A
ZN
301
B
ZN
ZN
1_555
A
HIS
150
A
NE2
HIS
150
1_555
101.5
A
HIS
72
A
NE2
HIS
72
1_555
A
ZN
301
B
ZN
ZN
1_555
A
HOH
701
N
O
HOH
1_555
118.2
A
HIS
74
A
ND1
HIS
74
1_555
A
ZN
301
B
ZN
ZN
1_555
A
HOH
701
N
O
HOH
1_555
112.5
A
HIS
150
A
NE2
HIS
150
1_555
A
ZN
301
B
ZN
ZN
1_555
A
HOH
701
N
O
HOH
1_555
123.5
A
ASP
76
A
OD2
ASP
76
1_555
A
ZN
302
C
ZN
ZN
1_555
A
HIS
77
A
NE2
HIS
77
1_555
95.4
A
ASP
76
A
OD2
ASP
76
1_555
A
ZN
302
C
ZN
ZN
1_555
A
HIS
215
A
NE2
HIS
215
1_555
91.5
A
HIS
77
A
NE2
HIS
77
1_555
A
ZN
302
C
ZN
ZN
1_555
A
HIS
215
A
NE2
HIS
215
1_555
103.1
A
ASP
76
A
OD2
ASP
76
1_555
A
ZN
302
C
ZN
ZN
1_555
A
HOH
701
N
O
HOH
1_555
88.6
A
HIS
77
A
NE2
HIS
77
1_555
A
ZN
302
C
ZN
ZN
1_555
A
HOH
701
N
O
HOH
1_555
113.0
A
HIS
215
A
NE2
HIS
215
1_555
A
ZN
302
C
ZN
ZN
1_555
A
HOH
701
N
O
HOH
1_555
143.7
A
ASP
76
A
OD2
ASP
76
1_555
A
ZN
302
C
ZN
ZN
1_555
A
HOH
702
N
O
HOH
1_555
165.6
A
HIS
77
A
NE2
HIS
77
1_555
A
ZN
302
C
ZN
ZN
1_555
A
HOH
702
N
O
HOH
1_555
98.4
A
HIS
215
A
NE2
HIS
215
1_555
A
ZN
302
C
ZN
ZN
1_555
A
HOH
702
N
O
HOH
1_555
89.2
A
HOH
701
N
O
HOH
1_555
A
ZN
302
C
ZN
ZN
1_555
A
HOH
702
N
O
HOH
1_555
82.4
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
PHE
12
A
N
PHE
12
A
O
TYR
20
A
O
TYR
20
A
N
HIS
19
A
N
HIS
19
A
O
LEU
30
A
O
LEU
30
A
N
LEU
31
A
N
LEU
31
A
O
ILE
38
A
O
ILE
38
A
N
LEU
39
A
N
LEU
39
A
O
LEU
69
A
O
LEU
69
A
N
ILE
68
A
N
ILE
68
A
O
LEU
93
A
O
LEU
93
A
N
VAL
92
A
N
VAL
92
A
O
ARG
127
A
O
ARG
127
A
N
VAL
135
A
N
VAL
135
A
O
VAL
142
A
O
VAL
142
A
N
LYS
143
A
N
LYS
143
A
O
THR
158
A
O
THR
158
A
N
TRP
159
A
N
TRP
159
A
O
VAL
170
A
O
VAL
170
A
N
VAL
171
A
N
VAL
171
A
O
ILE
212
A
O
ILE
212
1
A
GLN
1
A
GLN
1
1
Y
1
A
ASP
2
A
ASP
2
1
Y
1
A
ARG
262
A
ARG
262
1
Y
1
A
TYR
15
-162.02
119.15
1
A
ASP
41
68.98
161.88
1
A
THR
43
60.71
-147.27
1
A
SER
73
-90.00
54.43
1
A
ASP
238
-169.34
103.43
21.118
0.00
0.00
-0.00
0.00
-0.00
-0.00
0.967
0.953
HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT
0.20021
0.16466
0.16644
1.60
27.83
1664
31222
5.1
99.41
1.442
0.052
RANDOM
1
THROUGHOUT
MOLECULAR REPLACEMENT
0.087
0.089
0.80
0.80
1.20
PDB ENTRY 1SML
MAXIMUM LIKELIHOOD
MASK
1.60
27.83
277
2251
53
0
1921
0.011
0.019
2069
1.431
1.955
2814
6.076
5.000
279
31.467
24.070
86
12.543
15.000
332
19.447
15.000
13
0.095
0.200
317
0.007
0.021
1568
0.271
0.210
1.641
117
2313
20
99.55
1.6
50.0
3VPE
32909
0
0
0.051
1
11.2
99.4
0.216
1.60
1.63
1654
1
11.0
100.0
data collection
HKL-2000
phasing
AMoRE
refinement
REFMAC
5.6.0117
data reduction
HKL-2000
data scaling
HKL-2000
Crystal Structure of Metallo-beta-Lactamase SMB-1
1
N
N
2
N
N
2
N
N
3
N
N
3
N
N
3
N
N
4
N
N
4
N
N
4
N
N
5
N
N
5
N
N
5
N
N
5
N
N
6
N
N
A
LYS
46
A
LYS
46
HELX_P
A
MET
58
A
MET
58
1
1
13
A
LYS
61
A
LYS
61
HELX_P
A
SER
63
A
SER
63
5
2
3
A
HIS
74
A
HIS
74
HELX_P
A
GLY
79
A
GLY
79
1
3
6
A
GLY
80
A
GLY
80
HELX_P
A
GLY
89
A
GLY
89
1
4
10
A
ASN
98
A
ASN
98
HELX_P
A
GLY
105
A
GLY
105
1
5
8
A
ARG
185
A
ARG
185
HELX_P
A
ASP
188
A
ASP
188
5
6
4
A
HIS
189
A
HIS
189
HELX_P
A
LYS
205
A
LYS
205
1
7
17
A
HIS
215
A
HIS
215
HELX_P
A
ASN
219
A
ASN
219
5
8
5
A
ASP
220
A
ASP
220
HELX_P
A
GLY
232
A
GLY
232
1
9
13
A
ASN
233
A
ASN
233
HELX_P
A
VAL
237
A
VAL
237
5
10
5
A
GLY
240
A
GLY
240
HELX_P
A
LYS
261
A
LYS
261
1
11
22
disulf
2.055
A
CYS
162
A
SG
CYS
162
1_555
A
CYS
167
A
SG
CYS
167
1_555
disulf
2.088
A
CYS
208
A
SG
CYS
208
1_555
A
CYS
242
A
SG
CYS
242
1_555
metalc
2.051
A
HIS
72
A
NE2
HIS
72
1_555
A
ZN
301
B
ZN
ZN
1_555
metalc
2.061
A
HIS
74
A
ND1
HIS
74
1_555
A
ZN
301
B
ZN
ZN
1_555
metalc
2.114
A
ASP
76
A
OD2
ASP
76
1_555
A
ZN
302
C
ZN
ZN
1_555
metalc
2.051
A
HIS
77
A
NE2
HIS
77
1_555
A
ZN
302
C
ZN
ZN
1_555
metalc
2.000
A
HIS
150
A
NE2
HIS
150
1_555
A
ZN
301
B
ZN
ZN
1_555
metalc
2.052
A
HIS
215
A
NE2
HIS
215
1_555
A
ZN
302
C
ZN
ZN
1_555
metalc
1.971
A
ZN
301
B
ZN
ZN
1_555
A
HOH
701
N
O
HOH
1_555
metalc
2.071
A
ZN
302
C
ZN
ZN
1_555
A
HOH
701
N
O
HOH
1_555
metalc
2.215
A
ZN
302
C
ZN
ZN
1_555
A
HOH
702
N
O
HOH
1_555
HYDROLASE
Hydrolase
G5ELM3_SERMA
UNP
1
19
G5ELM3
QDRDWSSPQQPFTIYGNTHYVGTGGISAVLLSSPQGHILVDGTTEKGAQVVAANIRAMGFKLSDVKYILSTHSHEDHAGG
ISAMQKLTGATVLAGAANVDTLRTGVSPKSDPQFGSLSNFPGSAKVRAVADGELVKLGPLAVKAHATPGHTEGGITWTWQ
SCEQGKCKDVVFADSLTAVSADSYRFSDHPEVVASLRGSFEAVEKLSCDIAIAAHPEVNDMWTRQQRAAKEGNSAYVDNG
ACRAIAAAGRKRLETRLASEKR
19
280
3VPE
1
262
G5ELM3
A
1
1
262
7
5
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
A
PHE
12
A
PHE
12
A
TYR
15
A
TYR
15
A
THR
18
A
THR
18
A
TYR
20
A
TYR
20
A
VAL
29
A
VAL
29
A
LEU
31
A
LEU
31
A
HIS
37
A
HIS
37
A
VAL
40
A
VAL
40
A
VAL
65
A
VAL
65
A
LEU
69
A
LEU
69
A
THR
91
A
THR
91
A
GLY
95
A
GLY
95
A
VAL
126
A
VAL
126
A
VAL
129
A
VAL
129
A
LEU
134
A
LEU
134
A
LEU
137
A
LEU
137
A
LEU
140
A
LEU
140
A
ALA
146
A
ALA
146
A
ILE
155
A
ILE
155
A
GLU
163
A
GLU
163
A
LYS
166
A
LYS
166
A
ALA
173
A
ALA
173
A
ILE
210
A
ILE
210
A
ALA
213
A
ALA
213
BINDING SITE FOR RESIDUE ZN A 301
A
ZN
301
Software
7
BINDING SITE FOR RESIDUE ZN A 302
A
ZN
302
Software
7
BINDING SITE FOR RESIDUE SO4 A 303
A
SO4
303
Software
8
BINDING SITE FOR RESIDUE SO4 A 304
A
SO4
304
Software
4
BINDING SITE FOR RESIDUE SO4 A 305
A
SO4
305
Software
5
BINDING SITE FOR RESIDUE ACT A 306
A
ACT
306
Software
9
BINDING SITE FOR RESIDUE ACT A 307
A
ACT
307
Software
6
BINDING SITE FOR RESIDUE ACT A 308
A
ACT
308
Software
9
BINDING SITE FOR RESIDUE GOL A 309
A
GOL
309
Software
7
BINDING SITE FOR RESIDUE GOL A 310
A
GOL
310
Software
4
BINDING SITE FOR RESIDUE GOL A 311
A
GOL
311
Software
6
BINDING SITE FOR RESIDUE GOL A 312
A
GOL
312
Software
9
A
HIS
72
A
HIS
72
7
1_555
A
HIS
74
A
HIS
74
7
1_555
A
HIS
150
A
HIS
150
7
1_555
A
ZN
302
C
ZN
7
1_555
A
GOL
309
J
GOL
7
1_555
A
HOH
701
N
HOH
7
1_555
A
HOH
702
N
HOH
7
1_555
A
ASP
76
A
ASP
76
7
1_555
A
HIS
77
A
HIS
77
7
1_555
A
HIS
215
A
HIS
215
7
1_555
A
ZN
301
B
ZN
7
1_555
A
GOL
309
J
GOL
7
1_555
A
HOH
701
N
HOH
7
1_555
A
HOH
702
N
HOH
7
1_555
A
THR
91
A
THR
91
8
2_565
A
LYS
125
A
LYS
125
8
2_565
A
HIS
189
A
HIS
189
8
1_555
A
PRO
190
A
PRO
190
8
1_555
A
GLU
191
A
GLU
191
8
1_555
A
VAL
192
A
VAL
192
8
1_555
A
HOH
832
N
HOH
8
2_565
A
HOH
913
N
HOH
8
2_565
A
ARG
56
A
ARG
56
4
1_555
A
LYS
61
A
LYS
61
4
1_555
A
LEU
62
A
LEU
62
4
1_555
A
SER
63
A
SER
63
4
1_555
A
ASP
4
A
ASP
4
5
1_555
A
TRP
5
A
TRP
5
5
1_555
A
SER
6
A
SER
6
5
1_555
A
LYS
46
A
LYS
46
5
1_555
A
HOH
902
N
HOH
5
1_555
A
ASP
182
A
ASP
182
9
2_665
A
SER
183
A
SER
183
9
2_665
A
VAL
218
A
VAL
218
9
1_555
A
ASN
219
A
ASN
219
9
1_555
A
ASP
220
A
ASP
220
9
1_555
A
ARG
224
A
ARG
224
9
1_555
A
ALA
244
A
ALA
244
9
1_555
A
HOH
793
N
HOH
9
1_555
A
HOH
911
N
HOH
9
1_555
A
VAL
179
A
VAL
179
6
1_555
A
SER
180
A
SER
180
6
1_555
A
ARG
256
A
ARG
256
6
1_555
A
HOH
808
N
HOH
6
1_555
A
HOH
874
N
HOH
6
1_555
A
HOH
968
N
HOH
6
1_555
A
SER
175
A
SER
175
9
1_555
A
LEU
176
A
LEU
176
9
1_555
A
THR
177
A
THR
177
9
1_555
A
VAL
218
A
VAL
218
9
1_555
A
ILE
245
A
ILE
245
9
1_555
A
GLY
249
A
GLY
249
9
1_555
A
HOH
726
N
HOH
9
1_555
A
HOH
766
N
HOH
9
1_555
A
HOH
860
N
HOH
9
1_555
A
GLN
113
A
GLN
113
7
1_555
A
HIS
150
A
HIS
150
7
1_555
A
HIS
215
A
HIS
215
7
1_555
A
ZN
301
B
ZN
7
1_555
A
ZN
302
C
ZN
7
1_555
A
HOH
701
N
HOH
7
1_555
A
HOH
709
N
HOH
7
1_555
A
PRO
108
A
PRO
108
4
1_555
A
LYS
109
A
LYS
109
4
1_555
A
SER
110
A
SER
110
4
1_555
A
LYS
230
A
LYS
230
4
3_564
A
ALA
124
A
ALA
124
6
1_555
A
LYS
125
A
LYS
125
6
1_555
A
GLU
152
A
GLU
152
6
3_454
A
HOH
877
N
HOH
6
1_555
A
HOH
893
N
HOH
6
1_555
A
HOH
971
N
HOH
6
1_555
A
SER
183
A
SER
183
9
1_555
A
TYR
184
A
TYR
184
9
1_555
A
ARG
185
A
ARG
185
9
1_555
A
ASP
188
A
ASP
188
9
1_555
A
HIS
189
A
HIS
189
9
1_555
A
ARG
227
A
ARG
227
9
3_564
A
GLU
231
A
GLU
231
9
3_564
A
HOH
752
N
HOH
9
3_564
A
HOH
947
N
HOH
9
1_555
144
P 31