0.013749
0.000000
0.000000
0.000000
0.013301
0.000000
0.000000
0.000000
0.012449
0.00000
0.00000
0.00000
Pflug, A.
Johnson, K.A.
Engh, R.A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
72.730
75.180
80.330
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C20 H20 Br N3 O2 S
446.361
N-[2-(4-BROMOCINNAMYLAMINO)ETHYL]-5-ISOQUINOLINE SULFONAMIDE
H-89
non-polymer
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C6 H14 O2
118.174
(4S)-2-METHYL-2,4-PENTANEDIOL
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H8 N O6 P
185.072
n
PHOSPHOSERINE
PHOSPHONOSERINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C4 H10 N O6 P
199.099
n
PHOSPHOTHREONINE
PHOSPHONOTHREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
Y
183
N
C
Y
184
N
C
Y
185
N
C
Y
186
N
C
Y
187
N
C
Y
188
N
C
Y
189
N
N
Y
190
N
C
Y
191
N
C
Y
192
N
C
N
193
N
S
N
194
N
O
N
195
N
O
N
196
N
N
N
197
N
C
N
198
N
C
N
199
N
N
N
200
N
C
N
201
N
C
N
202
N
C
Y
203
N
C
Y
204
N
C
Y
205
N
C
Y
206
N
C
N
207
N
BR
Y
208
N
C
Y
209
N
C
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
C
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
N
N
253
S
C
N
254
N
C
N
255
N
O
N
256
N
C
N
257
N
C
N
258
N
C
N
259
N
C
N
260
N
N
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
N
N
278
S
C
N
279
N
C
N
280
N
O
N
281
N
C
N
282
N
C
N
283
N
S
N
284
N
C
N
285
N
O
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
C
N
298
N
C
N
299
N
O
N
300
N
C
N
301
N
C
N
302
S
C
N
303
N
O
N
304
N
C
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
N
N
320
S
C
N
321
N
C
N
322
N
O
N
323
N
C
Y
324
N
C
Y
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
C
N
330
N
O
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
N
N
343
S
C
N
344
N
C
N
345
N
O
N
346
N
C
N
347
N
C
N
348
N
C
N
349
N
O
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
N
N
360
S
C
N
361
N
C
N
362
N
O
N
363
N
C
N
364
N
O
N
365
N
O
N
366
N
P
N
367
N
O
N
368
N
O
N
369
N
O
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
N
N
379
S
C
N
380
N
C
N
381
N
O
N
382
N
C
N
383
N
O
N
384
N
O
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
N
N
393
S
C
N
394
N
C
N
395
N
O
N
396
R
C
N
397
N
O
N
398
N
C
N
399
N
O
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
N
N
410
S
C
N
411
R
C
N
412
N
C
N
413
N
O
N
414
N
P
N
415
N
O
N
416
N
O
N
417
N
O
N
418
N
C
N
419
N
O
N
420
N
O
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
N
N
432
S
C
N
433
N
C
N
434
N
O
N
435
N
C
Y
436
N
C
Y
437
N
C
Y
438
N
C
Y
439
N
N
Y
440
N
C
Y
441
N
C
Y
442
N
C
Y
443
N
C
Y
444
N
C
N
445
N
O
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
N
N
459
S
C
N
460
N
C
N
461
N
O
N
462
N
C
Y
463
N
C
Y
464
N
C
Y
465
N
C
Y
466
N
C
Y
467
N
C
Y
468
N
C
N
469
N
O
N
470
N
O
N
471
N
H
N
472
N
H
N
473
N
H
N
474
N
H
N
475
N
H
N
476
N
H
N
477
N
H
N
478
N
H
N
479
N
H
N
480
N
H
N
481
N
H
N
482
N
N
N
483
S
C
N
484
N
C
N
485
N
O
N
486
N
C
N
487
N
C
N
488
N
C
N
489
N
O
N
490
N
H
N
491
N
H
N
492
N
H
N
493
N
H
N
494
N
H
N
495
N
H
N
496
N
H
N
497
N
H
N
498
N
H
N
499
N
H
N
500
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
Y
173
N
doub
Y
174
N
sing
N
175
N
sing
Y
176
N
sing
N
177
N
sing
Y
178
N
doub
N
179
N
sing
Y
180
N
sing
N
181
N
sing
Y
182
N
sing
Y
183
N
doub
Y
184
N
doub
N
185
N
sing
Y
186
N
sing
Y
187
N
doub
N
188
N
sing
Y
189
N
sing
N
190
N
sing
N
191
N
doub
N
192
N
doub
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
E
doub
N
208
N
sing
N
209
N
sing
N
210
N
sing
Y
211
N
doub
Y
212
N
sing
Y
213
N
sing
N
214
N
sing
Y
215
N
doub
N
216
N
sing
N
217
N
sing
Y
218
N
sing
Y
219
N
doub
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
doub
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
doub
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
doub
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
doub
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
Y
318
N
doub
Y
319
N
sing
Y
320
N
sing
N
321
N
sing
Y
322
N
doub
N
323
N
sing
Y
324
N
doub
N
325
N
sing
Y
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
doub
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
doub
N
358
N
sing
N
359
N
sing
N
360
N
doub
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
doub
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
doub
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
doub
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
doub
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
doub
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
Y
426
N
doub
Y
427
N
sing
Y
428
N
sing
N
429
N
sing
Y
430
N
doub
Y
431
N
sing
Y
432
N
sing
N
433
N
sing
Y
434
N
sing
Y
435
N
doub
N
436
N
sing
Y
437
N
doub
N
438
N
sing
Y
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
doub
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
Y
454
N
doub
Y
455
N
sing
Y
456
N
sing
N
457
N
sing
Y
458
N
doub
N
459
N
sing
Y
460
N
doub
N
461
N
sing
Y
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
N
466
N
sing
N
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
sing
N
471
N
sing
N
472
N
sing
N
473
N
doub
N
474
N
sing
N
475
N
sing
N
476
N
sing
N
477
N
sing
N
478
N
sing
N
479
N
sing
N
480
N
sing
N
481
N
sing
N
482
N
sing
N
483
N
sing
N
484
N
sing
DK
Acta Crystallogr.,Sect.F
1744-3091
68
873
877
10.1107/S1744309112028655
22869112
Anomalous dispersion analysis of inhibitor flexibility: a case study of the kinase inhibitor H-89
2012
10.2210/pdb3vqh/pdb
pdb_00003vqh
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2009-12-11
ADSC QUANTUM 315r
SINGLE WAVELENGTH
M
x-ray
1
0.91969
1.0
ID29
ESRF
0.91969
SYNCHROTRON
ESRF BEAMLINE ID29
40888.547
cAMP-dependent protein kinase catalytic subunit alpha
2.7.11.11
1
man
polymer
2226.411
cAMP-dependent protein kinase inhibitor alpha
UNP resodues 6-25
1
syn
polymer
446.361
N-[2-(4-BROMOCINNAMYLAMINO)ETHYL]-5-ISOQUINOLINE SULFONAMIDE
1
syn
non-polymer
118.174
(4S)-2-METHYL-2,4-PENTANEDIOL
1
syn
non-polymer
18.015
water
178
nat
water
PKA C-alpha
PKI-alpha, cAMP-dependent protein kinase inhibitor, muscle/brain isoform
no
yes
MGNAAAAKKG(SEP)EQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILD
KQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE
YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW(TPO)LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM
AAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVE
APFIPKFKGPGDTSNFDDYEEEEIRV(SEP)INEKCGKEFSEF
MGNAAAAKKGSEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKV
VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS
LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF
ADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK
GPGDTSNFDDYEEEEIRVSINEKCGKEFSEF
A
polypeptide(L)
no
no
TTYADFIASGRTGRRNAIHD
TTYADFIASGRTGRRNAIHD
B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
PKACA, PRKACA
9606
Homo sapiens
562
Escherichia coli
BL21(DE3)
PLASMID
pT7-7
1
2.55
51.70
VAPOR DIFFUSION, HANGING DROP
6.9
10mg/ml protein, 25mM BisTris/MES pH6.9, 50mM KCl, 1.5mM octanoyl-N-methylglucamide, 1mM Protein kinase inhibitor peptide, 5mM H-89 in MeOH', VAPOR DIFFUSION, HANGING DROP, temperature 277K
277
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_conn
struct_site
repository
Initial release
Database references
Data collection
Database references
Derived calculations
Refinement description
1
0
2012-08-15
1
1
2014-04-30
1
2
2023-11-08
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.pdbx_leaving_atom_flag
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
A previously published complex of PKA and the inhibitor H-89
PDBJ
Y
PDBJ
2012-03-23
REL
REL
IQB
N-[2-(4-BROMOCINNAMYLAMINO)ETHYL]-5-ISOQUINOLINE SULFONAMIDE
MPD
(4S)-2-METHYL-2,4-PENTANEDIOL
HOH
water
the peptide fragment of PKI was synthesized by GL Biochem (Shanghai) Ltd.
9606
human
Homo sapiens
sample
1YDT
PDB ENTRY 1YDT
PDB
experimental model
IQB
1
3
IQB
IQB
401
A
MPD
2
4
MPD
MPD
402
A
HOH
1
5
HOH
HOH
501
A
HOH
2
5
HOH
HOH
502
A
HOH
3
5
HOH
HOH
503
A
HOH
4
5
HOH
HOH
504
A
HOH
5
5
HOH
HOH
505
A
HOH
6
5
HOH
HOH
506
A
HOH
7
5
HOH
HOH
507
A
HOH
8
5
HOH
HOH
508
A
HOH
9
5
HOH
HOH
509
A
HOH
10
5
HOH
HOH
510
A
HOH
11
5
HOH
HOH
511
A
HOH
12
5
HOH
HOH
512
A
HOH
14
5
HOH
HOH
513
A
HOH
15
5
HOH
HOH
514
A
HOH
17
5
HOH
HOH
515
A
HOH
18
5
HOH
HOH
516
A
HOH
19
5
HOH
HOH
517
A
HOH
20
5
HOH
HOH
518
A
HOH
21
5
HOH
HOH
519
A
HOH
23
5
HOH
HOH
520
A
HOH
24
5
HOH
HOH
521
A
HOH
25
5
HOH
HOH
522
A
HOH
26
5
HOH
HOH
523
A
HOH
27
5
HOH
HOH
524
A
HOH
28
5
HOH
HOH
525
A
HOH
29
5
HOH
HOH
526
A
HOH
30
5
HOH
HOH
527
A
HOH
31
5
HOH
HOH
528
A
HOH
33
5
HOH
HOH
529
A
HOH
34
5
HOH
HOH
530
A
HOH
35
5
HOH
HOH
531
A
HOH
36
5
HOH
HOH
532
A
HOH
37
5
HOH
HOH
533
A
HOH
38
5
HOH
HOH
534
A
HOH
39
5
HOH
HOH
535
A
HOH
40
5
HOH
HOH
536
A
HOH
41
5
HOH
HOH
537
A
HOH
43
5
HOH
HOH
538
A
HOH
44
5
HOH
HOH
539
A
HOH
45
5
HOH
HOH
540
A
HOH
46
5
HOH
HOH
541
A
HOH
47
5
HOH
HOH
542
A
HOH
49
5
HOH
HOH
543
A
HOH
50
5
HOH
HOH
544
A
HOH
51
5
HOH
HOH
545
A
HOH
52
5
HOH
HOH
546
A
HOH
53
5
HOH
HOH
547
A
HOH
54
5
HOH
HOH
548
A
HOH
55
5
HOH
HOH
549
A
HOH
56
5
HOH
HOH
550
A
HOH
57
5
HOH
HOH
551
A
HOH
60
5
HOH
HOH
552
A
HOH
61
5
HOH
HOH
553
A
HOH
62
5
HOH
HOH
554
A
HOH
63
5
HOH
HOH
555
A
HOH
64
5
HOH
HOH
556
A
HOH
66
5
HOH
HOH
557
A
HOH
67
5
HOH
HOH
558
A
HOH
68
5
HOH
HOH
559
A
HOH
70
5
HOH
HOH
560
A
HOH
71
5
HOH
HOH
561
A
HOH
72
5
HOH
HOH
562
A
HOH
73
5
HOH
HOH
563
A
HOH
74
5
HOH
HOH
564
A
HOH
75
5
HOH
HOH
565
A
HOH
76
5
HOH
HOH
566
A
HOH
77
5
HOH
HOH
567
A
HOH
78
5
HOH
HOH
568
A
HOH
80
5
HOH
HOH
569
A
HOH
81
5
HOH
HOH
570
A
HOH
82
5
HOH
HOH
571
A
HOH
83
5
HOH
HOH
572
A
HOH
84
5
HOH
HOH
573
A
HOH
85
5
HOH
HOH
574
A
HOH
86
5
HOH
HOH
575
A
HOH
87
5
HOH
HOH
576
A
HOH
88
5
HOH
HOH
577
A
HOH
89
5
HOH
HOH
578
A
HOH
90
5
HOH
HOH
579
A
HOH
92
5
HOH
HOH
580
A
HOH
93
5
HOH
HOH
581
A
HOH
94
5
HOH
HOH
582
A
HOH
95
5
HOH
HOH
583
A
HOH
96
5
HOH
HOH
584
A
HOH
97
5
HOH
HOH
585
A
HOH
98
5
HOH
HOH
586
A
HOH
99
5
HOH
HOH
587
A
HOH
100
5
HOH
HOH
588
A
HOH
101
5
HOH
HOH
589
A
HOH
102
5
HOH
HOH
590
A
HOH
103
5
HOH
HOH
591
A
HOH
104
5
HOH
HOH
592
A
HOH
105
5
HOH
HOH
593
A
HOH
106
5
HOH
HOH
594
A
HOH
107
5
HOH
HOH
595
A
HOH
109
5
HOH
HOH
596
A
HOH
110
5
HOH
HOH
597
A
HOH
111
5
HOH
HOH
598
A
HOH
112
5
HOH
HOH
599
A
HOH
114
5
HOH
HOH
600
A
HOH
115
5
HOH
HOH
601
A
HOH
116
5
HOH
HOH
602
A
HOH
117
5
HOH
HOH
603
A
HOH
118
5
HOH
HOH
604
A
HOH
119
5
HOH
HOH
605
A
HOH
120
5
HOH
HOH
606
A
HOH
121
5
HOH
HOH
607
A
HOH
123
5
HOH
HOH
608
A
HOH
124
5
HOH
HOH
609
A
HOH
125
5
HOH
HOH
610
A
HOH
126
5
HOH
HOH
611
A
HOH
127
5
HOH
HOH
612
A
HOH
128
5
HOH
HOH
613
A
HOH
130
5
HOH
HOH
614
A
HOH
131
5
HOH
HOH
615
A
HOH
132
5
HOH
HOH
616
A
HOH
133
5
HOH
HOH
617
A
HOH
134
5
HOH
HOH
618
A
HOH
135
5
HOH
HOH
619
A
HOH
136
5
HOH
HOH
620
A
HOH
137
5
HOH
HOH
621
A
HOH
138
5
HOH
HOH
622
A
HOH
139
5
HOH
HOH
623
A
HOH
140
5
HOH
HOH
624
A
HOH
142
5
HOH
HOH
625
A
HOH
143
5
HOH
HOH
626
A
HOH
144
5
HOH
HOH
627
A
HOH
145
5
HOH
HOH
628
A
HOH
146
5
HOH
HOH
629
A
HOH
147
5
HOH
HOH
630
A
HOH
148
5
HOH
HOH
631
A
HOH
149
5
HOH
HOH
632
A
HOH
150
5
HOH
HOH
633
A
HOH
151
5
HOH
HOH
634
A
HOH
152
5
HOH
HOH
635
A
HOH
153
5
HOH
HOH
636
A
HOH
154
5
HOH
HOH
637
A
HOH
155
5
HOH
HOH
638
A
HOH
157
5
HOH
HOH
639
A
HOH
158
5
HOH
HOH
640
A
HOH
159
5
HOH
HOH
641
A
HOH
160
5
HOH
HOH
642
A
HOH
161
5
HOH
HOH
643
A
HOH
162
5
HOH
HOH
644
A
HOH
163
5
HOH
HOH
645
A
HOH
164
5
HOH
HOH
646
A
HOH
166
5
HOH
HOH
647
A
HOH
167
5
HOH
HOH
648
A
HOH
168
5
HOH
HOH
649
A
HOH
169
5
HOH
HOH
650
A
HOH
170
5
HOH
HOH
651
A
HOH
171
5
HOH
HOH
652
A
HOH
172
5
HOH
HOH
653
A
HOH
173
5
HOH
HOH
654
A
HOH
174
5
HOH
HOH
655
A
HOH
175
5
HOH
HOH
656
A
HOH
177
5
HOH
HOH
657
A
HOH
178
5
HOH
HOH
658
A
HOH
13
5
HOH
HOH
101
B
HOH
16
5
HOH
HOH
102
B
HOH
22
5
HOH
HOH
103
B
HOH
32
5
HOH
HOH
104
B
HOH
42
5
HOH
HOH
105
B
HOH
48
5
HOH
HOH
106
B
HOH
58
5
HOH
HOH
107
B
HOH
59
5
HOH
HOH
108
B
HOH
65
5
HOH
HOH
109
B
HOH
69
5
HOH
HOH
110
B
HOH
79
5
HOH
HOH
111
B
HOH
91
5
HOH
HOH
112
B
HOH
108
5
HOH
HOH
113
B
HOH
113
5
HOH
HOH
114
B
HOH
122
5
HOH
HOH
115
B
HOH
129
5
HOH
HOH
116
B
HOH
141
5
HOH
HOH
117
B
HOH
156
5
HOH
HOH
118
B
HOH
165
5
HOH
HOH
119
B
HOH
176
5
HOH
HOH
120
B
n
1
0
A
n
2
1
A
n
3
2
A
n
4
3
A
ALA
4
n
5
ALA
4
A
ALA
5
n
6
ALA
5
A
ALA
6
n
7
ALA
6
A
LYS
7
n
8
LYS
7
A
LYS
8
n
9
LYS
8
A
GLY
9
n
10
GLY
9
A
SEP
10
n
11
SEP
10
A
GLU
11
n
12
GLU
11
A
GLN
12
n
13
GLN
12
A
GLU
13
n
14
GLU
13
A
SER
14
n
15
SER
14
A
VAL
15
n
16
VAL
15
A
LYS
16
n
17
LYS
16
A
GLU
17
n
18
GLU
17
A
PHE
18
n
19
PHE
18
A
LEU
19
n
20
LEU
19
A
ALA
20
n
21
ALA
20
A
LYS
21
n
22
LYS
21
A
ALA
22
n
23
ALA
22
A
LYS
23
n
24
LYS
23
A
GLU
24
n
25
GLU
24
A
ASP
25
n
26
ASP
25
A
PHE
26
n
27
PHE
26
A
LEU
27
n
28
LEU
27
A
LYS
28
n
29
LYS
28
A
LYS
29
n
30
LYS
29
A
TRP
30
n
31
TRP
30
A
GLU
31
n
32
GLU
31
A
SER
32
n
33
SER
32
A
PRO
33
n
34
PRO
33
A
ALA
34
n
35
ALA
34
A
GLN
35
n
36
GLN
35
A
ASN
36
n
37
ASN
36
A
THR
37
n
38
THR
37
A
ALA
38
n
39
ALA
38
A
HIS
39
n
40
HIS
39
A
LEU
40
n
41
LEU
40
A
ASP
41
n
42
ASP
41
A
GLN
42
n
43
GLN
42
A
PHE
43
n
44
PHE
43
A
GLU
44
n
45
GLU
44
A
ARG
45
n
46
ARG
45
A
ILE
46
n
47
ILE
46
A
LYS
47
n
48
LYS
47
A
THR
48
n
49
THR
48
A
LEU
49
n
50
LEU
49
A
GLY
50
n
51
GLY
50
A
THR
51
n
52
THR
51
A
GLY
52
n
53
GLY
52
A
SER
53
n
54
SER
53
A
PHE
54
n
55
PHE
54
A
GLY
55
n
56
GLY
55
A
ARG
56
n
57
ARG
56
A
VAL
57
n
58
VAL
57
A
MET
58
n
59
MET
58
A
LEU
59
n
60
LEU
59
A
VAL
60
n
61
VAL
60
A
LYS
61
n
62
LYS
61
A
HIS
62
n
63
HIS
62
A
LYS
63
n
64
LYS
63
A
GLU
64
n
65
GLU
64
A
THR
65
n
66
THR
65
A
GLY
66
n
67
GLY
66
A
ASN
67
n
68
ASN
67
A
HIS
68
n
69
HIS
68
A
TYR
69
n
70
TYR
69
A
ALA
70
n
71
ALA
70
A
MET
71
n
72
MET
71
A
LYS
72
n
73
LYS
72
A
ILE
73
n
74
ILE
73
A
LEU
74
n
75
LEU
74
A
ASP
75
n
76
ASP
75
A
LYS
76
n
77
LYS
76
A
GLN
77
n
78
GLN
77
A
LYS
78
n
79
LYS
78
A
VAL
79
n
80
VAL
79
A
VAL
80
n
81
VAL
80
A
LYS
81
n
82
LYS
81
A
LEU
82
n
83
LEU
82
A
LYS
83
n
84
LYS
83
A
GLN
84
n
85
GLN
84
A
ILE
85
n
86
ILE
85
A
GLU
86
n
87
GLU
86
A
HIS
87
n
88
HIS
87
A
THR
88
n
89
THR
88
A
LEU
89
n
90
LEU
89
A
ASN
90
n
91
ASN
90
A
GLU
91
n
92
GLU
91
A
LYS
92
n
93
LYS
92
A
ARG
93
n
94
ARG
93
A
ILE
94
n
95
ILE
94
A
LEU
95
n
96
LEU
95
A
GLN
96
n
97
GLN
96
A
ALA
97
n
98
ALA
97
A
VAL
98
n
99
VAL
98
A
ASN
99
n
100
ASN
99
A
PHE
100
n
101
PHE
100
A
PRO
101
n
102
PRO
101
A
PHE
102
n
103
PHE
102
A
LEU
103
n
104
LEU
103
A
VAL
104
n
105
VAL
104
A
LYS
105
n
106
LYS
105
A
LEU
106
n
107
LEU
106
A
GLU
107
n
108
GLU
107
A
PHE
108
n
109
PHE
108
A
SER
109
n
110
SER
109
A
PHE
110
n
111
PHE
110
A
LYS
111
n
112
LYS
111
A
ASP
112
n
113
ASP
112
A
ASN
113
n
114
ASN
113
A
SER
114
n
115
SER
114
A
ASN
115
n
116
ASN
115
A
LEU
116
n
117
LEU
116
A
TYR
117
n
118
TYR
117
A
MET
118
n
119
MET
118
A
VAL
119
n
120
VAL
119
A
MET
120
n
121
MET
120
A
GLU
121
n
122
GLU
121
A
TYR
122
n
123
TYR
122
A
VAL
123
n
124
VAL
123
A
PRO
124
n
125
PRO
124
A
GLY
125
n
126
GLY
125
A
GLY
126
n
127
GLY
126
A
GLU
127
n
128
GLU
127
A
MET
128
n
129
MET
128
A
PHE
129
n
130
PHE
129
A
SER
130
n
131
SER
130
A
HIS
131
n
132
HIS
131
A
LEU
132
n
133
LEU
132
A
ARG
133
n
134
ARG
133
A
ARG
134
n
135
ARG
134
A
ILE
135
n
136
ILE
135
A
GLY
136
n
137
GLY
136
A
ARG
137
n
138
ARG
137
A
PHE
138
n
139
PHE
138
A
SER
139
n
140
SER
139
A
GLU
140
n
141
GLU
140
A
PRO
141
n
142
PRO
141
A
HIS
142
n
143
HIS
142
A
ALA
143
n
144
ALA
143
A
ARG
144
n
145
ARG
144
A
PHE
145
n
146
PHE
145
A
TYR
146
n
147
TYR
146
A
ALA
147
n
148
ALA
147
A
ALA
148
n
149
ALA
148
A
GLN
149
n
150
GLN
149
A
ILE
150
n
151
ILE
150
A
VAL
151
n
152
VAL
151
A
LEU
152
n
153
LEU
152
A
THR
153
n
154
THR
153
A
PHE
154
n
155
PHE
154
A
GLU
155
n
156
GLU
155
A
TYR
156
n
157
TYR
156
A
LEU
157
n
158
LEU
157
A
HIS
158
n
159
HIS
158
A
SER
159
n
160
SER
159
A
LEU
160
n
161
LEU
160
A
ASP
161
n
162
ASP
161
A
LEU
162
n
163
LEU
162
A
ILE
163
n
164
ILE
163
A
TYR
164
n
165
TYR
164
A
ARG
165
n
166
ARG
165
A
ASP
166
n
167
ASP
166
A
LEU
167
n
168
LEU
167
A
LYS
168
n
169
LYS
168
A
PRO
169
n
170
PRO
169
A
GLU
170
n
171
GLU
170
A
ASN
171
n
172
ASN
171
A
LEU
172
n
173
LEU
172
A
LEU
173
n
174
LEU
173
A
ILE
174
n
175
ILE
174
A
ASP
175
n
176
ASP
175
A
GLN
176
n
177
GLN
176
A
GLN
177
n
178
GLN
177
A
GLY
178
n
179
GLY
178
A
TYR
179
n
180
TYR
179
A
ILE
180
n
181
ILE
180
A
GLN
181
n
182
GLN
181
A
VAL
182
n
183
VAL
182
A
THR
183
n
184
THR
183
A
ASP
184
n
185
ASP
184
A
PHE
185
n
186
PHE
185
A
GLY
186
n
187
GLY
186
A
PHE
187
n
188
PHE
187
A
ALA
188
n
189
ALA
188
A
LYS
189
n
190
LYS
189
A
ARG
190
n
191
ARG
190
A
VAL
191
n
192
VAL
191
A
LYS
192
n
193
LYS
192
A
GLY
193
n
194
GLY
193
A
ARG
194
n
195
ARG
194
A
THR
195
n
196
THR
195
A
TRP
196
n
197
TRP
196
A
TPO
197
n
198
TPO
197
A
LEU
198
n
199
LEU
198
A
CYS
199
n
200
CYS
199
A
GLY
200
n
201
GLY
200
A
THR
201
n
202
THR
201
A
PRO
202
n
203
PRO
202
A
GLU
203
n
204
GLU
203
A
TYR
204
n
205
TYR
204
A
LEU
205
n
206
LEU
205
A
ALA
206
n
207
ALA
206
A
PRO
207
n
208
PRO
207
A
GLU
208
n
209
GLU
208
A
ILE
209
n
210
ILE
209
A
ILE
210
n
211
ILE
210
A
LEU
211
n
212
LEU
211
A
SER
212
n
213
SER
212
A
LYS
213
n
214
LYS
213
A
GLY
214
n
215
GLY
214
A
TYR
215
n
216
TYR
215
A
ASN
216
n
217
ASN
216
A
LYS
217
n
218
LYS
217
A
ALA
218
n
219
ALA
218
A
VAL
219
n
220
VAL
219
A
ASP
220
n
221
ASP
220
A
TRP
221
n
222
TRP
221
A
TRP
222
n
223
TRP
222
A
ALA
223
n
224
ALA
223
A
LEU
224
n
225
LEU
224
A
GLY
225
n
226
GLY
225
A
VAL
226
n
227
VAL
226
A
LEU
227
n
228
LEU
227
A
ILE
228
n
229
ILE
228
A
TYR
229
n
230
TYR
229
A
GLU
230
n
231
GLU
230
A
MET
231
n
232
MET
231
A
ALA
232
n
233
ALA
232
A
ALA
233
n
234
ALA
233
A
GLY
234
n
235
GLY
234
A
TYR
235
n
236
TYR
235
A
PRO
236
n
237
PRO
236
A
PRO
237
n
238
PRO
237
A
PHE
238
n
239
PHE
238
A
PHE
239
n
240
PHE
239
A
ALA
240
n
241
ALA
240
A
ASP
241
n
242
ASP
241
A
GLN
242
n
243
GLN
242
A
PRO
243
n
244
PRO
243
A
ILE
244
n
245
ILE
244
A
GLN
245
n
246
GLN
245
A
ILE
246
n
247
ILE
246
A
TYR
247
n
248
TYR
247
A
GLU
248
n
249
GLU
248
A
LYS
249
n
250
LYS
249
A
ILE
250
n
251
ILE
250
A
VAL
251
n
252
VAL
251
A
SER
252
n
253
SER
252
A
GLY
253
n
254
GLY
253
A
LYS
254
n
255
LYS
254
A
VAL
255
n
256
VAL
255
A
ARG
256
n
257
ARG
256
A
PHE
257
n
258
PHE
257
A
PRO
258
n
259
PRO
258
A
SER
259
n
260
SER
259
A
HIS
260
n
261
HIS
260
A
PHE
261
n
262
PHE
261
A
SER
262
n
263
SER
262
A
SER
263
n
264
SER
263
A
ASP
264
n
265
ASP
264
A
LEU
265
n
266
LEU
265
A
LYS
266
n
267
LYS
266
A
ASP
267
n
268
ASP
267
A
LEU
268
n
269
LEU
268
A
LEU
269
n
270
LEU
269
A
ARG
270
n
271
ARG
270
A
ASN
271
n
272
ASN
271
A
LEU
272
n
273
LEU
272
A
LEU
273
n
274
LEU
273
A
GLN
274
n
275
GLN
274
A
VAL
275
n
276
VAL
275
A
ASP
276
n
277
ASP
276
A
LEU
277
n
278
LEU
277
A
THR
278
n
279
THR
278
A
LYS
279
n
280
LYS
279
A
ARG
280
n
281
ARG
280
A
PHE
281
n
282
PHE
281
A
GLY
282
n
283
GLY
282
A
ASN
283
n
284
ASN
283
A
LEU
284
n
285
LEU
284
A
LYS
285
n
286
LYS
285
A
ASN
286
n
287
ASN
286
A
GLY
287
n
288
GLY
287
A
VAL
288
n
289
VAL
288
A
ASN
289
n
290
ASN
289
A
ASP
290
n
291
ASP
290
A
ILE
291
n
292
ILE
291
A
LYS
292
n
293
LYS
292
A
ASN
293
n
294
ASN
293
A
HIS
294
n
295
HIS
294
A
LYS
295
n
296
LYS
295
A
TRP
296
n
297
TRP
296
A
PHE
297
n
298
PHE
297
A
ALA
298
n
299
ALA
298
A
THR
299
n
300
THR
299
A
THR
300
n
301
THR
300
A
ASP
301
n
302
ASP
301
A
TRP
302
n
303
TRP
302
A
ILE
303
n
304
ILE
303
A
ALA
304
n
305
ALA
304
A
ILE
305
n
306
ILE
305
A
TYR
306
n
307
TYR
306
A
GLN
307
n
308
GLN
307
A
ARG
308
n
309
ARG
308
A
LYS
309
n
310
LYS
309
A
VAL
310
n
311
VAL
310
A
GLU
311
n
312
GLU
311
A
ALA
312
n
313
ALA
312
A
PRO
313
n
314
PRO
313
A
PHE
314
n
315
PHE
314
A
ILE
315
n
316
ILE
315
A
PRO
316
n
317
PRO
316
A
LYS
317
n
318
LYS
317
A
PHE
318
n
319
PHE
318
A
LYS
319
n
320
LYS
319
A
GLY
320
n
321
GLY
320
A
PRO
321
n
322
PRO
321
A
GLY
322
n
323
GLY
322
A
ASP
323
n
324
ASP
323
A
THR
324
n
325
THR
324
A
SER
325
n
326
SER
325
A
ASN
326
n
327
ASN
326
A
PHE
327
n
328
PHE
327
A
ASP
328
n
329
ASP
328
A
ASP
329
n
330
ASP
329
A
TYR
330
n
331
TYR
330
A
GLU
331
n
332
GLU
331
A
GLU
332
n
333
GLU
332
A
GLU
333
n
334
GLU
333
A
GLU
334
n
335
GLU
334
A
ILE
335
n
336
ILE
335
A
ARG
336
n
337
ARG
336
A
VAL
337
n
338
VAL
337
A
SEP
338
n
339
SEP
338
A
ILE
339
n
340
ILE
339
A
ASN
340
n
341
ASN
340
A
GLU
341
n
342
GLU
341
A
LYS
342
n
343
LYS
342
A
CYS
343
n
344
CYS
343
A
GLY
344
n
345
GLY
344
A
LYS
345
n
346
LYS
345
A
GLU
346
n
347
GLU
346
A
PHE
347
n
348
PHE
347
A
SER
348
n
349
SER
348
A
GLU
349
n
350
GLU
349
A
PHE
350
n
351
PHE
350
A
THR
5
n
1
THR
5
B
THR
6
n
2
THR
6
B
TYR
7
n
3
TYR
7
B
ALA
8
n
4
ALA
8
B
ASP
9
n
5
ASP
9
B
PHE
10
n
6
PHE
10
B
ILE
11
n
7
ILE
11
B
ALA
12
n
8
ALA
12
B
SER
13
n
9
SER
13
B
GLY
14
n
10
GLY
14
B
ARG
15
n
11
ARG
15
B
THR
16
n
12
THR
16
B
GLY
17
n
13
GLY
17
B
ARG
18
n
14
ARG
18
B
ARG
19
n
15
ARG
19
B
ASN
20
n
16
ASN
20
B
ALA
21
n
17
ALA
21
B
ILE
22
n
18
ILE
22
B
HIS
23
n
19
HIS
23
B
ASP
24
n
20
ASP
24
B
author_defined_assembly
2
dimeric
A
SEP
10
PHOSPHOSERINE
A
SEP
11
SER
A
TPO
197
PHOSPHOTHREONINE
A
TPO
198
THR
A
SEP
338
PHOSPHOSERINE
A
SEP
339
SER
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
LYS
47
A
N
LYS
48
A
O
LEU
59
A
O
LEU
60
A
N
ARG
56
A
N
ARG
57
A
O
ILE
73
A
O
ILE
74
A
N
LYS
72
A
N
LYS
73
A
O
MET
118
A
O
MET
119
A
O
VAL
119
A
O
VAL
120
A
N
GLU
107
A
N
GLU
108
A
N
ILE
163
A
N
ILE
164
A
O
LYS
189
A
O
LYS
190
A
N
LEU
173
A
N
LEU
174
A
O
GLN
181
A
O
GLN
182
1
A
MET
0
A
MET
1
1
Y
1
A
GLY
1
A
GLY
2
1
Y
1
A
ASN
2
A
ASN
3
1
Y
1
A
ALA
3
A
ALA
4
1
Y
1
-13.89
1.90
111.40
97.51
A
A
A
CB
CA
C
VAL
VAL
VAL
191
191
191
N
1
A
ASP
166
-143.35
41.92
1
A
ASP
184
66.00
75.68
1
A
ASN
216
-136.18
-157.72
1
A
LYS
319
-114.23
64.21
1
B
HIS
23
-103.25
-71.90
21.910
0.01
0.00
0.00
0.04
0.00
-0.06
0.947
0.917
HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT
0.23395
0.18983
0.19203
1.95
33.39
1652
30935
5.1
99.88
3.226
0.094
RANDOM
1
THROUGHOUT
MOLECULAR REPLACEMENT
0.161
0.151
0.80
0.80
1.20
PDB ENTRY 1YDT
MAXIMUM LIKELIHOOD
MASK
1.95
33.39
178
3228
35
0
3015
0.010
0.020
3155
0.002
0.020
14
1.382
1.978
4257
0.718
3.000
28
5.444
5.000
365
35.666
23.882
152
14.337
15.000
551
16.844
15.000
18
0.100
0.200
440
0.007
0.021
2386
0.289
0.239
2.004
116
2072
20
99.41
1.73
50
3VQH
32645
1
19.08
4.6
99.3
1.95
2.20
5.68
1
4.6
98.0
phasing
MOLREP
refinement
REFMAC
5.6.0117
data reduction
XDS
data scaling
XSCALE
Bromine SAD partially resolves multiple binding modes for PKA inhibitor H-89
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
5
N
N
A
GLY
9
A
GLY
10
HELX_P
A
SER
32
A
SER
33
1
1
24
A
HIS
39
A
HIS
40
HELX_P
A
ASP
41
A
ASP
42
5
2
3
A
LYS
76
A
LYS
77
HELX_P
A
LEU
82
A
LEU
83
1
3
7
A
GLN
84
A
GLN
85
HELX_P
A
VAL
98
A
VAL
99
1
4
15
A
GLU
127
A
GLU
128
HELX_P
A
GLY
136
A
GLY
137
1
5
10
A
SER
139
A
SER
140
HELX_P
A
LEU
160
A
LEU
161
1
6
22
A
LYS
168
A
LYS
169
HELX_P
A
GLU
170
A
GLU
171
5
7
3
A
THR
201
A
THR
202
HELX_P
A
LEU
205
A
LEU
206
5
8
5
A
ALA
206
A
ALA
207
HELX_P
A
LEU
211
A
LEU
212
1
9
6
A
LYS
217
A
LYS
218
HELX_P
A
GLY
234
A
GLY
235
1
10
18
A
GLN
242
A
GLN
243
HELX_P
A
GLY
253
A
GLY
254
1
11
12
A
SER
262
A
SER
263
HELX_P
A
LEU
273
A
LEU
274
1
12
12
A
VAL
288
A
VAL
289
HELX_P
A
ASN
293
A
ASN
294
1
13
6
A
HIS
294
A
HIS
295
HELX_P
A
ALA
298
A
ALA
299
5
14
5
A
ASP
301
A
ASP
302
HELX_P
A
GLN
307
A
GLN
308
1
15
7
B
THR
6
B
THR
2
HELX_P
B
ALA
12
B
ALA
8
1
16
7
covale
1.333
both
A
GLY
9
A
C
GLY
10
1_555
A
SEP
10
A
N
SEP
11
1_555
covale
1.335
both
A
SEP
10
A
C
SEP
11
1_555
A
GLU
11
A
N
GLU
12
1_555
covale
1.328
both
A
TRP
196
A
C
TRP
197
1_555
A
TPO
197
A
N
TPO
198
1_555
covale
1.324
both
A
TPO
197
A
C
TPO
198
1_555
A
LEU
198
A
N
LEU
199
1_555
covale
1.326
both
A
VAL
337
A
C
VAL
338
1_555
A
SEP
338
A
N
SEP
339
1_555
covale
1.336
both
A
SEP
338
A
C
SEP
339
1_555
A
ILE
339
A
N
ILE
340
1_555
TRANSFERASE/TRANSFERASE INHIBITOR
PROTEIN-INHIBITOR COMPLEX, TRANSFERASE-TRANSFERASE INHIBITOR complex
KAPCA_HUMAN
UNP
1
1
P17612
MGNAAAAKKGSEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKV
VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS
LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF
ADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFK
GPGDTSNFDDYEEEEIRVSINEKCGKEFSEF
IPKA_HUMAN
UNP
2
6
P61925
TTYADFIASGRTGRRNAIHD
1
351
3VQH
0
350
P17612
A
1
1
351
6
25
3VQH
5
24
P61925
B
2
1
20
5
2
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
PHE
43
A
PHE
44
A
GLY
52
A
GLY
53
A
GLY
55
A
GLY
56
A
HIS
62
A
HIS
63
A
HIS
68
A
HIS
69
A
ASP
75
A
ASP
76
A
ASN
115
A
ASN
116
A
GLU
121
A
GLU
122
A
LEU
106
A
LEU
107
A
LYS
111
A
LYS
112
A
LEU
162
A
LEU
163
A
ILE
163
A
ILE
164
A
LYS
189
A
LYS
190
A
ARG
190
A
ARG
191
A
LEU
172
A
LEU
173
A
ILE
174
A
ILE
175
A
ILE
180
A
ILE
181
A
VAL
182
A
VAL
183
BINDING SITE FOR RESIDUE IQB A 401
A
IQB
401
Software
24
BINDING SITE FOR RESIDUE MPD A 402
A
MPD
402
Software
5
BINDING SITE FOR CHAIN B OF CAMP-DEPENDENT PROTEIN KINASE INHIBITOR ALPHA
Software
58
A
LEU
49
A
LEU
50
24
1_555
A
GLY
50
A
GLY
51
24
1_555
A
THR
51
A
THR
52
24
1_555
A
GLY
52
A
GLY
53
24
1_555
A
PHE
54
A
PHE
55
24
1_555
A
GLY
55
A
GLY
56
24
1_555
A
ARG
56
A
ARG
57
24
1_555
A
VAL
57
A
VAL
58
24
1_555
A
ALA
70
A
ALA
71
24
1_555
A
LYS
72
A
LYS
73
24
1_555
A
LEU
74
A
LEU
75
24
1_555
A
MET
120
A
MET
121
24
1_555
A
GLU
121
A
GLU
122
24
1_555
A
TYR
122
A
TYR
123
24
1_555
A
VAL
123
A
VAL
124
24
1_555
A
GLU
127
A
GLU
128
24
1_555
A
GLU
170
A
GLU
171
24
1_555
A
ASN
171
A
ASN
172
24
1_555
A
LEU
173
A
LEU
174
24
1_555
A
THR
183
A
THR
184
24
1_555
A
ASP
184
A
ASP
185
24
1_555
A
PHE
327
A
PHE
328
24
1_555
A
HOH
501
E
HOH
24
1_555
A
HOH
634
E
HOH
24
1_555
A
ARG
134
A
ARG
135
5
1_555
A
ARG
194
A
ARG
195
5
2_454
A
ASN
326
A
ASN
327
5
1_555
A
PHE
327
A
PHE
328
5
1_555
A
ASP
328
A
ASP
329
5
1_555
A
SEP
10
A
SEP
11
58
4_445
A
SER
53
A
SER
54
58
1_555
A
PHE
54
A
PHE
55
58
1_555
A
LYS
63
A
LYS
64
58
4_455
A
GLN
84
A
GLN
85
58
1_555
A
GLU
86
A
GLU
87
58
2_454
A
ARG
93
A
ARG
94
58
2_454
A
GLU
127
A
GLU
128
58
1_555
A
PHE
129
A
PHE
130
58
1_555
A
SER
130
A
SER
131
58
1_555
A
ARG
133
A
ARG
134
58
1_555
A
LYS
168
A
LYS
169
58
1_555
A
PRO
169
A
PRO
170
58
1_555
A
GLU
170
A
GLU
171
58
1_555
A
PHE
187
A
PHE
188
58
1_555
A
LYS
189
A
LYS
190
58
2_454
A
ARG
190
A
ARG
191
58
2_454
A
VAL
191
A
VAL
192
58
2_454
A
LYS
192
A
LYS
193
58
2_454
A
LEU
198
A
LEU
199
58
1_555
A
CYS
199
A
CYS
200
58
1_555
A
GLY
200
A
GLY
201
58
1_555
A
PRO
202
A
PRO
203
58
1_555
A
GLU
203
A
GLU
204
58
1_555
A
GLU
230
A
GLU
231
58
1_555
A
GLY
234
A
GLY
235
58
1_555
A
TYR
235
A
TYR
236
58
1_555
A
PRO
236
A
PRO
237
58
1_555
A
PHE
239
A
PHE
240
58
1_555
A
ALA
240
A
ALA
241
58
1_555
A
ASP
241
A
ASP
242
58
1_555
A
ILE
246
A
ILE
247
58
1_555
A
ASP
328
A
ASP
329
58
1_555
A
TYR
330
A
TYR
331
58
1_555
A
GLU
349
A
GLU
350
58
2_454
A
HOH
509
E
HOH
58
1_555
A
HOH
515
E
HOH
58
2_454
A
HOH
522
E
HOH
58
1_555
A
HOH
538
E
HOH
58
1_555
A
HOH
543
E
HOH
58
4_445
A
HOH
586
E
HOH
58
1_555
B
HOH
101
F
HOH
58
1_555
B
HOH
102
F
HOH
58
1_555
B
HOH
103
F
HOH
58
1_555
B
HOH
104
F
HOH
58
1_555
B
HOH
105
F
HOH
58
1_555
B
HOH
106
F
HOH
58
1_555
B
HOH
107
F
HOH
58
1_555
B
HOH
108
F
HOH
58
1_555
B
HOH
109
F
HOH
58
1_555
B
HOH
111
F
HOH
58
1_555
B
HOH
112
F
HOH
58
1_555
B
HOH
113
F
HOH
58
1_555
B
HOH
114
F
HOH
58
1_555
B
HOH
115
F
HOH
58
1_555
B
HOH
117
F
HOH
58
1_555
B
HOH
119
F
HOH
58
1_555
B
HOH
120
F
HOH
58
1_555
19
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