0.011947 0.000000 0.000000 0.000000 0.011947 0.000000 0.000000 0.000000 0.006398 0.00000 0.00000 0.00000 Wild, K. Schulz, G.E. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 83.700 83.700 156.300 C9 H12 I N2 O8 P 434.078 n 5-IODO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE DNA linking C10 H15 N5 O10 P2 427.201 n ADENOSINE-5'-DIPHOSPHATE non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 N C N 3 N N N 4 N C N 5 N C N 6 N C N 7 N O N 8 N O N 9 N I N 10 R C N 11 N C N 12 S C N 13 R C N 14 N O N 15 N O N 16 N C N 17 N O N 18 N P N 19 N O N 20 N O N 21 N O N 22 N H N 23 N H N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N P N 35 N O N 36 N O N 37 N O N 38 S P N 39 N O N 40 N O N 41 N O N 42 N O N 43 N C N 44 R C N 45 N O N 46 S C N 47 N O N 48 R C N 49 N O N 50 R C Y 51 N N Y 52 N C Y 53 N N Y 54 N C Y 55 N C N 56 N N Y 57 N N Y 58 N C Y 59 N N Y 60 N C N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N H N 75 N H N 76 N N N 77 S C N 78 N C N 79 N O N 80 N C N 81 N O N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N N N 90 S C N 91 N C N 92 N O N 93 N C N 94 N C N 95 N C N 96 N N N 97 N C N 98 N N N 99 N N N 100 N O N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N N N 117 S C N 118 N C N 119 N O N 120 N C N 121 N C N 122 N O N 123 N N N 124 N O N 125 N H N 126 N H N 127 N H N 128 N H N 129 N H N 130 N H N 131 N H N 132 N H N 133 N N N 134 S C N 135 N C N 136 N O N 137 N C N 138 N C N 139 N O N 140 N O N 141 N O N 142 N H N 143 N H N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N N N 150 R C N 151 N C N 152 N O N 153 N C N 154 N S N 155 N O N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N N N 164 S C N 165 N C N 166 N O N 167 N C N 168 N C N 169 N C N 170 N O N 171 N N N 172 N O N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N O N 191 N O N 192 N O N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N N N 203 N C N 204 N C N 205 N O N 206 N O N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N N N 213 S C N 214 N C N 215 N O N 216 N C Y 217 N C Y 218 N N Y 219 N C Y 220 N C Y 221 N N N 222 N O N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N O N 234 N H N 235 N H N 236 N N N 237 S C N 238 N C N 239 N O N 240 S C N 241 N C N 242 N C N 243 N C N 244 N O N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N N N 259 S C N 260 N C N 261 N O N 262 N C N 263 N C N 264 N C N 265 N C N 266 N O N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N N N 281 S C N 282 N C N 283 N O N 284 N C N 285 N C N 286 N C N 287 N C N 288 N N N 289 N O N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N N N 306 S C N 307 N C N 308 N O N 309 N C N 310 N C N 311 N S N 312 N C N 313 N O N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N N N 326 S C N 327 N C N 328 N O N 329 N C Y 330 N C Y 331 N C Y 332 N C Y 333 N C Y 334 N C Y 335 N C N 336 N O N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N N N 349 S C N 350 N C N 351 N O N 352 N C N 353 N C N 354 N C N 355 N O N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N N N 366 S C N 367 N C N 368 N O N 369 N C N 370 N O N 371 N O N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N N N 380 S C N 381 N C N 382 N O N 383 R C N 384 N O N 385 N C N 386 N O N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N N N 397 S C N 398 N C N 399 N O N 400 N C Y 401 N C Y 402 N C Y 403 N C Y 404 N N Y 405 N C Y 406 N C Y 407 N C Y 408 N C Y 409 N C N 410 N O N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N N N 424 S C N 425 N C N 426 N O N 427 N C Y 428 N C Y 429 N C Y 430 N C Y 431 N C Y 432 N C Y 433 N C N 434 N O N 435 N O N 436 N H N 437 N H N 438 N H N 439 N H N 440 N H N 441 N H N 442 N H N 443 N H N 444 N H N 445 N H N 446 N H N 447 N N N 448 S C N 449 N C N 450 N O N 451 N C N 452 N C N 453 N C N 454 N O N 455 N H N 456 N H N 457 N H N 458 N H N 459 N H N 460 N H N 461 N H N 462 N H N 463 N H N 464 N H N 465 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N doub N 6 N sing N 7 N sing N 8 N sing N 9 N doub N 10 N doub N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N doub N 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N doub N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N doub N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing Y 64 N sing Y 65 N sing Y 66 N doub N 67 N sing Y 68 N sing Y 69 N sing Y 70 N doub N 71 N sing Y 72 N doub N 73 N sing N 74 N sing Y 75 N sing Y 76 N doub N 77 N sing Y 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N doub N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N doub N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N doub N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N doub N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N doub N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N doub N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N doub N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N doub N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N doub N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N doub N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N doub N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N doub N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N doub N 214 N sing N 215 N sing N 216 N sing N 217 N sing Y 218 N sing Y 219 N doub Y 220 N doub N 221 N sing Y 222 N sing N 223 N sing Y 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N doub N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N doub N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N doub N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N doub N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N doub N 322 N sing N 323 N sing N 324 N sing N 325 N sing Y 326 N doub Y 327 N sing Y 328 N sing N 329 N sing Y 330 N doub N 331 N sing Y 332 N doub N 333 N sing Y 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N doub N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N doub N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N doub N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N doub N 391 N sing N 392 N sing N 393 N sing N 394 N sing Y 395 N doub Y 396 N sing Y 397 N sing N 398 N sing Y 399 N doub Y 400 N sing Y 401 N sing N 402 N sing Y 403 N sing Y 404 N doub N 405 N sing Y 406 N doub N 407 N sing Y 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N doub N 419 N sing N 420 N sing N 421 N sing N 422 N sing Y 423 N doub Y 424 N sing Y 425 N sing N 426 N sing Y 427 N doub N 428 N sing Y 429 N doub N 430 N sing Y 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N doub N 443 N sing N 444 N sing N 445 N sing N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing US Protein Sci. PRCIEI 0795 0961-8368 6 2097 2106 9336833 The structures of thymidine kinase from herpes simplex virus type 1 in complex with substrates and a substrate analogue. 1997 NE FEBS Lett. FEBLAL 0165 0014-5793 368 289 The Three-Dimensional Structure of Thymidine Kinase from Herpes Simplex Virus Type 1 1995 US Protein Expr.Purif. PEXPEJ 0757 1046-5928 5 432 A Fast Method for Obtaining Highly Pure Recombinant Herpes Simplex Virus Type 1 Thymidine Kinase 1994 10.2210/pdb3vtk/pdb pdb_00003vtk 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 293 1 AREA DETECTOR 1996-02 SIEMENS GRAPHITE(002) M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU RUH2R 37205.605 THYMIDINE KINASE 2.7.1.21 1 man polymer 427.201 ADENOSINE-5'-DIPHOSPHATE 1 syn non-polymer 434.078 5-IODO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE 1 syn non-polymer 18.015 water 6 nat water no no QQEATEVRPEQKMPTLLRVYIDGPHGMGKTTTTQLLVALGSRDDIVYVPEPMTYWRVLGASETIANIYTTQHRLDQGEIS AGDAAVVMTSAQITMGMPYAVTDAVLAPHIGGEAGSSHAPPPALTLIFDRHPIAALLCYPAARYLMGSMTPQAVLAFVAL IPPTLPGTNIVLGALPEDRHIDRLAKRQRPGERLDLAMLAAIRRVYGLLANTVRYLQCGGSWREDWGQLSGTAVPPQGAE PQSNAGPRPHIGDTLFTLFRAPELLAPNGDLYNVFAWALDVLAKRLRSMHVFILDYDQSPAGCRDALLQLTSGMVQTHVT TPGSIPTICDLARTFAREMGEAN QQEATEVRPEQKMPTLLRVYIDGPHGMGKTTTTQLLVALGSRDDIVYVPEPMTYWRVLGASETIANIYTTQHRLDQGEIS AGDAAVVMTSAQITMGMPYAVTDAVLAPHIGGEAGSSHAPPPALTLIFDRHPIAALLCYPAARYLMGSMTPQAVLAFVAL IPPTLPGTNIVLGALPEDRHIDRLAKRQRPGERLDLAMLAAIRRVYGLLANTVRYLQCGGSWREDWGQLSGTAVPPQGAE PQSNAGPRPHIGDTLFTLFRAPELLAPNGDLYNVFAWALDVLAKRLRSMHVFILDYDQSPAGCRDALLQLTSGMVQTHVT TPGSIPTICDLARTFAREMGEAN A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Simplexvirus Human herpesvirus 1 F Escherichia sample 10304 Herpes simplex virus (type 1 / strain F) 562 Escherichia coli KY 895 PGEX2T 1 3.65 67. 5.5 pH 5.5 chem_comp_atom chem_comp_bond database_2 pdbx_database_status struct_site repository Initial release Version format compliance Derived calculations Version format compliance Data collection Database references Derived calculations Other 1 0 1997-10-22 1 1 2008-03-25 1 2 2011-07-13 1 3 2024-02-28 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.process_site _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Y BNL 1997-04-01 REL REL ADP ADENOSINE-5'-DIPHOSPHATE 5IU 5-IODO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE HOH water ADP 400 2 ADP ADP 400 A 5IU 500 3 5IU 5IU 500 A HOH 601 4 HOH HOH 601 A HOH 602 4 HOH HOH 602 A HOH 603 4 HOH HOH 603 A HOH 604 4 HOH HOH 604 A HOH 605 4 HOH HOH 605 A HOH 606 4 HOH HOH 606 A n 1 34 A n 2 35 A n 3 36 A n 4 37 A n 5 38 A n 6 39 A n 7 40 A n 8 41 A n 9 42 A n 10 43 A n 11 44 A n 12 45 A MET 46 n 13 MET 46 A PRO 47 n 14 PRO 47 A THR 48 n 15 THR 48 A LEU 49 n 16 LEU 49 A LEU 50 n 17 LEU 50 A ARG 51 n 18 ARG 51 A VAL 52 n 19 VAL 52 A TYR 53 n 20 TYR 53 A ILE 54 n 21 ILE 54 A ASP 55 n 22 ASP 55 A GLY 56 n 23 GLY 56 A PRO 57 n 24 PRO 57 A HIS 58 n 25 HIS 58 A GLY 59 n 26 GLY 59 A MET 60 n 27 MET 60 A GLY 61 n 28 GLY 61 A LYS 62 n 29 LYS 62 A THR 63 n 30 THR 63 A THR 64 n 31 THR 64 A THR 65 n 32 THR 65 A THR 66 n 33 THR 66 A GLN 67 n 34 GLN 67 A LEU 68 n 35 LEU 68 A LEU 69 n 36 LEU 69 A VAL 70 n 37 VAL 70 A ALA 71 n 38 ALA 71 A LEU 72 n 39 LEU 72 A GLY 73 n 40 GLY 73 A SER 74 n 41 SER 74 A ARG 75 n 42 ARG 75 A ASP 76 n 43 ASP 76 A ASP 77 n 44 ASP 77 A ILE 78 n 45 ILE 78 A VAL 79 n 46 VAL 79 A TYR 80 n 47 TYR 80 A VAL 81 n 48 VAL 81 A PRO 82 n 49 PRO 82 A GLU 83 n 50 GLU 83 A PRO 84 n 51 PRO 84 A MET 85 n 52 MET 85 A THR 86 n 53 THR 86 A TYR 87 n 54 TYR 87 A TRP 88 n 55 TRP 88 A ARG 89 n 56 ARG 89 A VAL 90 n 57 VAL 90 A LEU 91 n 58 LEU 91 A GLY 92 n 59 GLY 92 A ALA 93 n 60 ALA 93 A SER 94 n 61 SER 94 A GLU 95 n 62 GLU 95 A THR 96 n 63 THR 96 A ILE 97 n 64 ILE 97 A ALA 98 n 65 ALA 98 A ASN 99 n 66 ASN 99 A ILE 100 n 67 ILE 100 A TYR 101 n 68 TYR 101 A THR 102 n 69 THR 102 A THR 103 n 70 THR 103 A GLN 104 n 71 GLN 104 A HIS 105 n 72 HIS 105 A ARG 106 n 73 ARG 106 A LEU 107 n 74 LEU 107 A ASP 108 n 75 ASP 108 A GLN 109 n 76 GLN 109 A GLY 110 n 77 GLY 110 A GLU 111 n 78 GLU 111 A ILE 112 n 79 ILE 112 A SER 113 n 80 SER 113 A ALA 114 n 81 ALA 114 A GLY 115 n 82 GLY 115 A ASP 116 n 83 ASP 116 A ALA 117 n 84 ALA 117 A ALA 118 n 85 ALA 118 A VAL 119 n 86 VAL 119 A VAL 120 n 87 VAL 120 A MET 121 n 88 MET 121 A THR 122 n 89 THR 122 A SER 123 n 90 SER 123 A ALA 124 n 91 ALA 124 A GLN 125 n 92 GLN 125 A ILE 126 n 93 ILE 126 A THR 127 n 94 THR 127 A MET 128 n 95 MET 128 A GLY 129 n 96 GLY 129 A MET 130 n 97 MET 130 A PRO 131 n 98 PRO 131 A TYR 132 n 99 TYR 132 A ALA 133 n 100 ALA 133 A VAL 134 n 101 VAL 134 A THR 135 n 102 THR 135 A ASP 136 n 103 ASP 136 A ALA 137 n 104 ALA 137 A VAL 138 n 105 VAL 138 A LEU 139 n 106 LEU 139 A ALA 140 n 107 ALA 140 A PRO 141 n 108 PRO 141 A HIS 142 n 109 HIS 142 A ILE 143 n 110 ILE 143 A GLY 144 n 111 GLY 144 A GLY 145 n 112 GLY 145 A GLU 146 n 113 GLU 146 A ALA 147 n 114 ALA 147 A GLY 148 n 115 GLY 148 A SER 149 n 116 SER 149 A n 117 150 A n 118 151 A n 119 152 A PRO 153 n 120 PRO 153 A PRO 154 n 121 PRO 154 A PRO 155 n 122 PRO 155 A ALA 156 n 123 ALA 156 A LEU 157 n 124 LEU 157 A THR 158 n 125 THR 158 A LEU 159 n 126 LEU 159 A ILE 160 n 127 ILE 160 A PHE 161 n 128 PHE 161 A ASP 162 n 129 ASP 162 A ARG 163 n 130 ARG 163 A HIS 164 n 131 HIS 164 A PRO 165 n 132 PRO 165 A ILE 166 n 133 ILE 166 A ALA 167 n 134 ALA 167 A ALA 168 n 135 ALA 168 A LEU 169 n 136 LEU 169 A LEU 170 n 137 LEU 170 A CYS 171 n 138 CYS 171 A TYR 172 n 139 TYR 172 A PRO 173 n 140 PRO 173 A ALA 174 n 141 ALA 174 A ALA 175 n 142 ALA 175 A ARG 176 n 143 ARG 176 A TYR 177 n 144 TYR 177 A LEU 178 n 145 LEU 178 A MET 179 n 146 MET 179 A GLY 180 n 147 GLY 180 A SER 181 n 148 SER 181 A MET 182 n 149 MET 182 A THR 183 n 150 THR 183 A PRO 184 n 151 PRO 184 A GLN 185 n 152 GLN 185 A ALA 186 n 153 ALA 186 A VAL 187 n 154 VAL 187 A LEU 188 n 155 LEU 188 A ALA 189 n 156 ALA 189 A PHE 190 n 157 PHE 190 A VAL 191 n 158 VAL 191 A ALA 192 n 159 ALA 192 A LEU 193 n 160 LEU 193 A ILE 194 n 161 ILE 194 A PRO 195 n 162 PRO 195 A PRO 196 n 163 PRO 196 A THR 197 n 164 THR 197 A LEU 198 n 165 LEU 198 A PRO 199 n 166 PRO 199 A GLY 200 n 167 GLY 200 A THR 201 n 168 THR 201 A ASN 202 n 169 ASN 202 A ILE 203 n 170 ILE 203 A VAL 204 n 171 VAL 204 A LEU 205 n 172 LEU 205 A GLY 206 n 173 GLY 206 A ALA 207 n 174 ALA 207 A LEU 208 n 175 LEU 208 A PRO 209 n 176 PRO 209 A GLU 210 n 177 GLU 210 A ASP 211 n 178 ASP 211 A ARG 212 n 179 ARG 212 A HIS 213 n 180 HIS 213 A ILE 214 n 181 ILE 214 A ASP 215 n 182 ASP 215 A ARG 216 n 183 ARG 216 A LEU 217 n 184 LEU 217 A ALA 218 n 185 ALA 218 A LYS 219 n 186 LYS 219 A ARG 220 n 187 ARG 220 A GLN 221 n 188 GLN 221 A ARG 222 n 189 ARG 222 A PRO 223 n 190 PRO 223 A GLY 224 n 191 GLY 224 A GLU 225 n 192 GLU 225 A ARG 226 n 193 ARG 226 A LEU 227 n 194 LEU 227 A ASP 228 n 195 ASP 228 A LEU 229 n 196 LEU 229 A ALA 230 n 197 ALA 230 A MET 231 n 198 MET 231 A LEU 232 n 199 LEU 232 A ALA 233 n 200 ALA 233 A ALA 234 n 201 ALA 234 A ILE 235 n 202 ILE 235 A ARG 236 n 203 ARG 236 A ARG 237 n 204 ARG 237 A VAL 238 n 205 VAL 238 A TYR 239 n 206 TYR 239 A GLY 240 n 207 GLY 240 A LEU 241 n 208 LEU 241 A LEU 242 n 209 LEU 242 A ALA 243 n 210 ALA 243 A ASN 244 n 211 ASN 244 A THR 245 n 212 THR 245 A VAL 246 n 213 VAL 246 A ARG 247 n 214 ARG 247 A TYR 248 n 215 TYR 248 A LEU 249 n 216 LEU 249 A GLN 250 n 217 GLN 250 A CYS 251 n 218 CYS 251 A GLY 252 n 219 GLY 252 A GLY 253 n 220 GLY 253 A SER 254 n 221 SER 254 A TRP 255 n 222 TRP 255 A ARG 256 n 223 ARG 256 A GLU 257 n 224 GLU 257 A ASP 258 n 225 ASP 258 A TRP 259 n 226 TRP 259 A GLY 260 n 227 GLY 260 A GLN 261 n 228 GLN 261 A LEU 262 n 229 LEU 262 A SER 263 n 230 SER 263 A GLY 264 n 231 GLY 264 A n 232 265 A n 233 266 A n 234 267 A n 235 268 A n 236 269 A n 237 270 A n 238 271 A n 239 272 A n 240 273 A n 241 274 A n 242 275 A n 243 276 A n 244 277 A n 245 278 A n 246 279 A PRO 280 n 247 PRO 280 A ARG 281 n 248 ARG 281 A PRO 282 n 249 PRO 282 A HIS 283 n 250 HIS 283 A ILE 284 n 251 ILE 284 A GLY 285 n 252 GLY 285 A ASP 286 n 253 ASP 286 A THR 287 n 254 THR 287 A LEU 288 n 255 LEU 288 A PHE 289 n 256 PHE 289 A THR 290 n 257 THR 290 A LEU 291 n 258 LEU 291 A PHE 292 n 259 PHE 292 A ARG 293 n 260 ARG 293 A ALA 294 n 261 ALA 294 A PRO 295 n 262 PRO 295 A GLU 296 n 263 GLU 296 A LEU 297 n 264 LEU 297 A LEU 298 n 265 LEU 298 A ALA 299 n 266 ALA 299 A PRO 300 n 267 PRO 300 A ASN 301 n 268 ASN 301 A GLY 302 n 269 GLY 302 A ASP 303 n 270 ASP 303 A LEU 304 n 271 LEU 304 A TYR 305 n 272 TYR 305 A ASN 306 n 273 ASN 306 A VAL 307 n 274 VAL 307 A PHE 308 n 275 PHE 308 A ALA 309 n 276 ALA 309 A TRP 310 n 277 TRP 310 A ALA 311 n 278 ALA 311 A LEU 312 n 279 LEU 312 A ASP 313 n 280 ASP 313 A VAL 314 n 281 VAL 314 A LEU 315 n 282 LEU 315 A ALA 316 n 283 ALA 316 A LYS 317 n 284 LYS 317 A ARG 318 n 285 ARG 318 A LEU 319 n 286 LEU 319 A ARG 320 n 287 ARG 320 A SER 321 n 288 SER 321 A MET 322 n 289 MET 322 A HIS 323 n 290 HIS 323 A VAL 324 n 291 VAL 324 A PHE 325 n 292 PHE 325 A ILE 326 n 293 ILE 326 A LEU 327 n 294 LEU 327 A ASP 328 n 295 ASP 328 A TYR 329 n 296 TYR 329 A ASP 330 n 297 ASP 330 A GLN 331 n 298 GLN 331 A SER 332 n 299 SER 332 A PRO 333 n 300 PRO 333 A ALA 334 n 301 ALA 334 A GLY 335 n 302 GLY 335 A CYS 336 n 303 CYS 336 A ARG 337 n 304 ARG 337 A ASP 338 n 305 ASP 338 A ALA 339 n 306 ALA 339 A LEU 340 n 307 LEU 340 A LEU 341 n 308 LEU 341 A GLN 342 n 309 GLN 342 A LEU 343 n 310 LEU 343 A THR 344 n 311 THR 344 A SER 345 n 312 SER 345 A GLY 346 n 313 GLY 346 A MET 347 n 314 MET 347 A VAL 348 n 315 VAL 348 A GLN 349 n 316 GLN 349 A THR 350 n 317 THR 350 A HIS 351 n 318 HIS 351 A VAL 352 n 319 VAL 352 A THR 353 n 320 THR 353 A THR 354 n 321 THR 354 A PRO 355 n 322 PRO 355 A GLY 356 n 323 GLY 356 A SER 357 n 324 SER 357 A ILE 358 n 325 ILE 358 A PRO 359 n 326 PRO 359 A THR 360 n 327 THR 360 A ILE 361 n 328 ILE 361 A CYS 362 n 329 CYS 362 A ASP 363 n 330 ASP 363 A LEU 364 n 331 LEU 364 A ALA 365 n 332 ALA 365 A ARG 366 n 333 ARG 366 A THR 367 n 334 THR 367 A PHE 368 n 335 PHE 368 A ALA 369 n 336 ALA 369 A ARG 370 n 337 ARG 370 A GLU 371 n 338 GLU 371 A MET 372 n 339 MET 372 A GLY 373 n 340 GLY 373 A GLU 374 n 341 GLU 374 A ALA 375 n 342 ALA 375 A ASN 376 n 343 ASN 376 A author_and_software_defined_assembly PISA,PQS 2 dimeric 6200 -61 22730 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 6_655 -x+1,-y,z crystal symmetry operation 83.7000000000 0.0000000000 0.0000000000 A O HIS 323 A O HIS 290 A N ILE 203 A N ILE 170 A O ASN 202 A O ASN 169 A N TYR 53 A N TYR 20 A O LEU 50 A O LEU 17 A N LEU 157 A N LEU 124 A O THR 158 A O THR 125 A N VAL 79 A N VAL 46 1 A GLN 34 A GLN 1 1 Y 1 A GLN 35 A GLN 2 1 Y 1 A GLU 36 A GLU 3 1 Y 1 A ALA 37 A ALA 4 1 Y 1 A THR 38 A THR 5 1 Y 1 A GLU 39 A GLU 6 1 Y 1 A VAL 40 A VAL 7 1 Y 1 A ARG 41 A ARG 8 1 Y 1 A PRO 42 A PRO 9 1 Y 1 A GLU 43 A GLU 10 1 Y 1 A GLN 44 A GLN 11 1 Y 1 A LYS 45 A LYS 12 1 Y 1 A SER 150 A SER 117 1 Y 1 A HIS 151 A HIS 118 1 Y 1 A ALA 152 A ALA 119 1 Y 1 A THR 265 A THR 232 1 Y 1 A ALA 266 A ALA 233 1 Y 1 A VAL 267 A VAL 234 1 Y 1 A PRO 268 A PRO 235 1 Y 1 A PRO 269 A PRO 236 1 Y 1 A GLN 270 A GLN 237 1 Y 1 A GLY 271 A GLY 238 1 Y 1 A ALA 272 A ALA 239 1 Y 1 A GLU 273 A GLU 240 1 Y 1 A PRO 274 A PRO 241 1 Y 1 A GLN 275 A GLN 242 1 Y 1 A SER 276 A SER 243 1 Y 1 A ASN 277 A ASN 244 1 Y 1 A ALA 278 A ALA 245 1 Y 1 A GLY 279 A GLY 246 1 Y 1 14.61 2.30 115.30 129.91 A A A CA CB CG LEU LEU LEU 49 49 49 N 1 10.95 1.50 119.30 130.25 A A A C N CA ALA PRO PRO 294 295 295 Y 1 A LYS 62 -41.50 -78.20 1 A LEU 72 -62.85 0.18 1 A ASP 76 -70.21 39.79 1 A PRO 84 -74.18 27.41 1 A MET 85 -32.59 -39.26 1 A TRP 88 -45.43 -74.22 1 A VAL 90 -106.11 -86.00 1 A LEU 91 -48.68 -19.38 1 A GLU 95 44.51 70.80 1 A PRO 141 -65.85 8.70 1 A ARG 163 67.74 141.36 1 A PRO 165 -15.56 -52.71 1 A LEU 170 -138.17 -57.08 1 A ILE 194 -33.32 103.95 1 A ARG 220 -172.77 134.81 1 A VAL 246 -59.68 -71.36 1 A CYS 251 -95.16 31.78 1 A LEU 291 -46.67 -17.91 1 A ARG 293 -92.68 40.18 1 A LEU 364 -40.82 -70.08 PARHCSDX.PRO TOPHCSDX.PRO PARAM19.SOL TOP19.SOL ISOTROPIC THERMAL FACTORS WERE NOT REFINED AND CORRESPOND TO THE STRUCTURE WITH ADP AND DEOXYTHYMIDINE-MONOPHOSPHATE, PDB ENTRY 1VTK. 0.3050000 0.010 0.2220000 0.2220000 3.0 10.0 863 8411 9.9 78.8 RANDOM 1 THROUGHOUT DIFFERENCE FOURIER 0.32 4.8 0.56 3.0 10.0 6 2445 48 0 2391 0.013 1.75 24.8 1.94 0.4200000 0.052 0.2890000 3.13 65 579 8 11.2 49.5 3.0 100. 3VTK 8723 0.0840000 1 11.0 2.4 77.1 3.00 3.16 2.8 0.2440000 1 49.8 model building X-PLOR refinement X-PLOR data reduction XDS data scaling MERGE phasing X-PLOR THYMIDINE KINASE FROM HERPES SIMPLEX VIRUS TYPE 1 IN COMPLEX WITH ADP AND 5-IODO-DEOXYURIDINE-MONOPHOSPHATE 1 N N 2 N N 3 N N 4 N N A LYS 62 A LYS 29 HELX_P A GLN 67 A GLN 34 1 1 6 A VAL 70 A VAL 37 HELX_P A LEU 72 A LEU 39 5 2 3 A MET 85 A MET 52 HELX_P A ARG 89 A ARG 56 1 3 5 A THR 96 A THR 63 HELX_P A ASP 108 A ASP 75 1 4 13 A ALA 114 A ALA 81 HELX_P A HIS 142 A HIS 109 1 5 29 A PRO 165 A PRO 132 HELX_P A LEU 169 A LEU 136 5 6 5 A CYS 171 A CYS 138 HELX_P A LEU 178 A LEU 145 1 7 8 A PRO 184 A PRO 151 HELX_P A VAL 191 A VAL 158 1 8 8 A GLU 210 A GLU 177 HELX_P A LYS 219 A LYS 186 1 9 10 A LEU 229 A LEU 196 HELX_P A GLN 250 A GLN 217 1 10 22 A TRP 255 A TRP 222 HELX_P A SER 263 A SER 230 1 11 9 A ILE 284 A ILE 251 HELX_P A ASP 286 A ASP 253 5 12 3 A LEU 288 A LEU 255 HELX_P A THR 290 A THR 257 5 13 3 A PRO 295 A PRO 262 HELX_P A LEU 297 A LEU 264 5 14 3 A ASN 306 A ASN 273 HELX_P A LEU 319 A LEU 286 1 15 14 A PRO 333 A PRO 300 HELX_P A SER 345 A SER 312 1 16 13 A SER 357 A SER 324 HELX_P A MET 372 A MET 339 1 17 16 TRANSFERASE KEY ENZYME IN THYMIDINE SALVAGE PATHWAY, ADDITIONAL THYMIDYLATE KINASE ACTIVITY, TARGET FOR ANTI-HERPES VIRAL DRUGS, TRANSFERASE KITH_HHV11 UNP 1 1 P03176 MASYPCHQHASAFDQAARSRGHNNRRTALRPRRQQEATEVRPEQKMPTLLRVYIDGPHGMGKTTTTQLLVALGSRDDIVY VPEPMTYWRVLGASETIANIYTTQHRLDQGEISAGDAAVVMTSAQITMGMPYAVTDAVLAPHIGGEAGSSHAPPPALTLI FDRHPIAALLCYPAARYLMGSMTPQAVLAFVALIPPTLPGTNIVLGALPEDRHIDRLAKRQRPGERLDLAMLAAIRRVYG LLANTVRYLQCGGSWREDWGQLSGTAVPPQGAEPQSNAGPRPHIGDTLFTLFRAPELLAPNGDLYNVFAWALDVLAKRLR SMHVFILDYDQSPAGCRDALLQLTSGMVQTHVTTPGSIPTICDLARTFAREMGEAN 34 376 3VTK 34 376 P03176 A 1 1 343 5 parallel parallel parallel parallel A HIS 323 A HIS 290 A ASP 328 A ASP 295 A ASN 202 A ASN 169 A ALA 207 A ALA 174 A LEU 49 A LEU 16 A ILE 54 A ILE 21 A LEU 157 A LEU 124 A ASP 162 A ASP 129 A ILE 78 A ILE 45 A VAL 81 A VAL 48 BINDING SITE FOR RESIDUE 5IU A 500 A 5IU 500 Software 13 BINDING SITE FOR RESIDUE ADP A 400 A ADP 400 Software 10 A HIS 58 A HIS 25 13 1_555 A LYS 62 A LYS 29 13 1_555 A GLU 83 A GLU 50 13 1_555 A ILE 97 A ILE 64 13 1_555 A TYR 101 A TYR 68 13 1_555 A GLN 125 A GLN 92 13 1_555 A MET 128 A MET 95 13 1_555 A ARG 163 A ARG 130 13 1_555 A ALA 168 A ALA 135 13 1_555 A TYR 172 A TYR 139 13 1_555 A GLU 225 A GLU 192 13 1_555 A HOH 602 D HOH 13 1_555 A HOH 605 D HOH 13 1_555 A GLY 59 A GLY 26 10 1_555 A MET 60 A MET 27 10 1_555 A GLY 61 A GLY 28 10 1_555 A LYS 62 A LYS 29 10 1_555 A THR 63 A THR 30 10 1_555 A THR 64 A THR 31 10 1_555 A ARG 216 A ARG 183 10 1_555 A ARG 220 A ARG 187 10 1_555 A GLN 331 A GLN 298 10 1_555 A HOH 605 D HOH 10 1_555 80 I 41