0.013723
0.007923
0.000000
0.000000
0.015846
0.000000
0.000000
0.000000
0.006000
0.00000
0.00000
0.00000
Ishizuka, T.
Narikawa, R.
Muraki, N.
Shiba, T.
Kurisu, G.
Ikeuchi, M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
120.00
72.868
72.868
166.667
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C33 H40 N4 O6
588.694
Phycoviolobilin, green light-absorbing form
non-polymer
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Proc.Natl.Acad.Sci.USA
PNASA6
0040
0027-8424
110
918
923
10.1073/pnas.1212098110
23256156
Structures of cyanobacteriochromes from phototaxis regulators AnPixJ and TePixJ reveal general and specific photoconversion mechanism
2013
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2011-11-11
ADSC QUANTUM 270
Si 111
SINGLE WAVELENGTH
M
x-ray
1
1.000
1.0
BL-17A
Photon Factory
1.000
SYNCHROTRON
PHOTON FACTORY BEAMLINE BL-17A
22291.098
Methyl-accepting chemotaxis protein
GAF domain, UNP residues 430-591
2
man
polymer
588.694
Phycoviolobilin, green light-absorbing form
2
syn
non-polymer
96.063
SULFATE ION
4
syn
non-polymer
18.015
water
111
nat
water
TePixJ
no
no
MGGSHHHHHHGMASMTGGQQMGRDLYDDDDKDHMAAVQLSELRDRQAIFETLVAKGRELLACDRVIVYAFDDNYVGTVVA
ESVAEGWPQARDQVIEDPCFREHWVEAYRQGRIQATTDIFKAGLTECHLNQLRPLKVRANLVVPMVIDDQLFGLLIAHQC
SEPRQWQEIEIDQFSELASTGSLVLERLHFLEQTIA
MGGSHHHHHHGMASMTGGQQMGRDLYDDDDKDHMAAVQLSELRDRQAIFETLVAKGRELLACDRVIVYAFDDNYVGTVVA
ESVAEGWPQARDQVIEDPCFREHWVEAYRQGRIQATTDIFKAGLTECHLNQLRPLKVRANLVVPMVIDDQLFGLLIAHQC
SEPRQWQEIEIDQFSELASTGSLVLERLHFLEQTIA
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
BP-1
sample
tll0569
197221
Thermosynechococcus elongatus
1148
Synechocystis
PCC6803
1
2.87
57.07
VAPOR DIFFUSION, HANGING DROP
5.8
1.15M ammonium sulfate, 100mM MES buffer, pH 5.8, VAPOR DIFFUSION, HANGING DROP, temperature 277K
277
repository
Initial release
1
0
2013-01-30
PDBJ
Y
PDBJ
2012-07-14
REL
REL
PVG
Phycoviolobilin, green light-absorbing form
SO4
SULFATE ION
HOH
water
PVG
200
2
PVG
PVG
201
A
SO4
1
3
SO4
SO4
202
A
SO4
2
3
SO4
SO4
203
A
SO4
3
3
SO4
SO4
204
A
PVG
200
2
PVG
PVG
201
B
SO4
4
3
SO4
SO4
202
B
HOH
1
4
HOH
HOH
301
A
HOH
2
4
HOH
HOH
302
A
HOH
3
4
HOH
HOH
303
A
HOH
4
4
HOH
HOH
304
A
HOH
5
4
HOH
HOH
305
A
HOH
6
4
HOH
HOH
306
A
HOH
7
4
HOH
HOH
307
A
HOH
9
4
HOH
HOH
308
A
HOH
10
4
HOH
HOH
309
A
HOH
11
4
HOH
HOH
310
A
HOH
12
4
HOH
HOH
311
A
HOH
13
4
HOH
HOH
312
A
HOH
14
4
HOH
HOH
313
A
HOH
15
4
HOH
HOH
314
A
HOH
16
4
HOH
HOH
315
A
HOH
17
4
HOH
HOH
316
A
HOH
18
4
HOH
HOH
317
A
HOH
19
4
HOH
HOH
318
A
HOH
20
4
HOH
HOH
319
A
HOH
21
4
HOH
HOH
320
A
HOH
22
4
HOH
HOH
321
A
HOH
24
4
HOH
HOH
322
A
HOH
25
4
HOH
HOH
323
A
HOH
26
4
HOH
HOH
324
A
HOH
27
4
HOH
HOH
325
A
HOH
28
4
HOH
HOH
326
A
HOH
29
4
HOH
HOH
327
A
HOH
30
4
HOH
HOH
328
A
HOH
32
4
HOH
HOH
329
A
HOH
33
4
HOH
HOH
330
A
HOH
34
4
HOH
HOH
331
A
HOH
35
4
HOH
HOH
332
A
HOH
36
4
HOH
HOH
333
A
HOH
37
4
HOH
HOH
334
A
HOH
38
4
HOH
HOH
335
A
HOH
39
4
HOH
HOH
336
A
HOH
40
4
HOH
HOH
337
A
HOH
41
4
HOH
HOH
338
A
HOH
42
4
HOH
HOH
339
A
HOH
43
4
HOH
HOH
340
A
HOH
44
4
HOH
HOH
341
A
HOH
45
4
HOH
HOH
342
A
HOH
46
4
HOH
HOH
343
A
HOH
49
4
HOH
HOH
344
A
HOH
50
4
HOH
HOH
345
A
HOH
51
4
HOH
HOH
346
A
HOH
70
4
HOH
HOH
347
A
HOH
74
4
HOH
HOH
348
A
HOH
75
4
HOH
HOH
349
A
HOH
76
4
HOH
HOH
350
A
HOH
77
4
HOH
HOH
351
A
HOH
78
4
HOH
HOH
352
A
HOH
80
4
HOH
HOH
353
A
HOH
81
4
HOH
HOH
354
A
HOH
83
4
HOH
HOH
355
A
HOH
86
4
HOH
HOH
356
A
HOH
88
4
HOH
HOH
357
A
HOH
89
4
HOH
HOH
358
A
HOH
90
4
HOH
HOH
359
A
HOH
92
4
HOH
HOH
360
A
HOH
93
4
HOH
HOH
361
A
HOH
94
4
HOH
HOH
362
A
HOH
95
4
HOH
HOH
363
A
HOH
96
4
HOH
HOH
364
A
HOH
98
4
HOH
HOH
365
A
HOH
101
4
HOH
HOH
366
A
HOH
102
4
HOH
HOH
367
A
HOH
103
4
HOH
HOH
368
A
HOH
104
4
HOH
HOH
369
A
HOH
105
4
HOH
HOH
370
A
HOH
106
4
HOH
HOH
371
A
HOH
108
4
HOH
HOH
372
A
HOH
109
4
HOH
HOH
373
A
HOH
120
4
HOH
HOH
374
A
HOH
128
4
HOH
HOH
375
A
HOH
130
4
HOH
HOH
376
A
HOH
132
4
HOH
HOH
377
A
HOH
133
4
HOH
HOH
378
A
HOH
135
4
HOH
HOH
379
A
HOH
53
4
HOH
HOH
301
B
HOH
54
4
HOH
HOH
302
B
HOH
55
4
HOH
HOH
303
B
HOH
56
4
HOH
HOH
304
B
HOH
57
4
HOH
HOH
305
B
HOH
58
4
HOH
HOH
306
B
HOH
59
4
HOH
HOH
307
B
HOH
60
4
HOH
HOH
308
B
HOH
61
4
HOH
HOH
309
B
HOH
63
4
HOH
HOH
310
B
HOH
64
4
HOH
HOH
311
B
HOH
65
4
HOH
HOH
312
B
HOH
66
4
HOH
HOH
313
B
HOH
67
4
HOH
HOH
314
B
HOH
68
4
HOH
HOH
315
B
HOH
69
4
HOH
HOH
316
B
HOH
71
4
HOH
HOH
317
B
HOH
72
4
HOH
HOH
318
B
HOH
73
4
HOH
HOH
319
B
HOH
85
4
HOH
HOH
320
B
HOH
113
4
HOH
HOH
321
B
HOH
114
4
HOH
HOH
322
B
HOH
115
4
HOH
HOH
323
B
HOH
116
4
HOH
HOH
324
B
HOH
117
4
HOH
HOH
325
B
HOH
121
4
HOH
HOH
326
B
HOH
123
4
HOH
HOH
327
B
HOH
124
4
HOH
HOH
328
B
HOH
126
4
HOH
HOH
329
B
HOH
127
4
HOH
HOH
330
B
HOH
131
4
HOH
HOH
331
B
HOH
134
4
HOH
HOH
332
B
n
1
-32
A
n
2
-31
A
n
3
-30
A
n
4
-29
A
n
5
-28
A
n
6
-27
A
n
7
-26
A
n
8
-25
A
n
9
-24
A
n
10
-23
A
n
11
-22
A
n
12
-21
A
n
13
-20
A
n
14
-19
A
n
15
-18
A
n
16
-17
A
n
17
-16
A
n
18
-15
A
n
19
-14
A
n
20
-13
A
n
21
-12
A
n
22
-11
A
n
23
-10
A
n
24
-9
A
n
25
-8
A
n
26
-7
A
n
27
-6
A
n
28
-5
A
n
29
-4
A
n
30
-3
A
n
31
-2
A
n
32
-1
A
n
33
0
A
n
34
1
A
n
35
2
A
n
36
3
A
n
37
4
A
n
38
5
A
LEU
6
n
39
LEU
6
A
SER
7
n
40
SER
7
A
GLU
8
n
41
GLU
8
A
LEU
9
n
42
LEU
9
A
ARG
10
n
43
ARG
10
A
ASP
11
n
44
ASP
11
A
ARG
12
n
45
ARG
12
A
GLN
13
n
46
GLN
13
A
ALA
14
n
47
ALA
14
A
ILE
15
n
48
ILE
15
A
PHE
16
n
49
PHE
16
A
GLU
17
n
50
GLU
17
A
THR
18
n
51
THR
18
A
LEU
19
n
52
LEU
19
A
VAL
20
n
53
VAL
20
A
ALA
21
n
54
ALA
21
A
LYS
22
n
55
LYS
22
A
GLY
23
n
56
GLY
23
A
ARG
24
n
57
ARG
24
A
GLU
25
n
58
GLU
25
A
LEU
26
n
59
LEU
26
A
LEU
27
n
60
LEU
27
A
ALA
28
n
61
ALA
28
A
CYS
29
n
62
CYS
29
A
ASP
30
n
63
ASP
30
A
ARG
31
n
64
ARG
31
A
VAL
32
n
65
VAL
32
A
ILE
33
n
66
ILE
33
A
VAL
34
n
67
VAL
34
A
TYR
35
n
68
TYR
35
A
ALA
36
n
69
ALA
36
A
PHE
37
n
70
PHE
37
A
ASP
38
n
71
ASP
38
A
ASP
39
n
72
ASP
39
A
ASN
40
n
73
ASN
40
A
TYR
41
n
74
TYR
41
A
VAL
42
n
75
VAL
42
A
GLY
43
n
76
GLY
43
A
THR
44
n
77
THR
44
A
VAL
45
n
78
VAL
45
A
VAL
46
n
79
VAL
46
A
ALA
47
n
80
ALA
47
A
GLU
48
n
81
GLU
48
A
SER
49
n
82
SER
49
A
VAL
50
n
83
VAL
50
A
ALA
51
n
84
ALA
51
A
GLU
52
n
85
GLU
52
A
GLY
53
n
86
GLY
53
A
TRP
54
n
87
TRP
54
A
PRO
55
n
88
PRO
55
A
GLN
56
n
89
GLN
56
A
ALA
57
n
90
ALA
57
A
ARG
58
n
91
ARG
58
A
ASP
59
n
92
ASP
59
A
GLN
60
n
93
GLN
60
A
VAL
61
n
94
VAL
61
A
ILE
62
n
95
ILE
62
A
GLU
63
n
96
GLU
63
A
ASP
64
n
97
ASP
64
A
PRO
65
n
98
PRO
65
A
CYS
66
n
99
CYS
66
A
PHE
67
n
100
PHE
67
A
ARG
68
n
101
ARG
68
A
GLU
69
n
102
GLU
69
A
HIS
70
n
103
HIS
70
A
TRP
71
n
104
TRP
71
A
VAL
72
n
105
VAL
72
A
GLU
73
n
106
GLU
73
A
ALA
74
n
107
ALA
74
A
TYR
75
n
108
TYR
75
A
ARG
76
n
109
ARG
76
A
GLN
77
n
110
GLN
77
A
GLY
78
n
111
GLY
78
A
ARG
79
n
112
ARG
79
A
ILE
80
n
113
ILE
80
A
GLN
81
n
114
GLN
81
A
ALA
82
n
115
ALA
82
A
THR
83
n
116
THR
83
A
THR
84
n
117
THR
84
A
ASP
85
n
118
ASP
85
A
ILE
86
n
119
ILE
86
A
PHE
87
n
120
PHE
87
A
LYS
88
n
121
LYS
88
A
ALA
89
n
122
ALA
89
A
GLY
90
n
123
GLY
90
A
LEU
91
n
124
LEU
91
A
THR
92
n
125
THR
92
A
GLU
93
n
126
GLU
93
A
CYS
94
n
127
CYS
94
A
HIS
95
n
128
HIS
95
A
LEU
96
n
129
LEU
96
A
ASN
97
n
130
ASN
97
A
GLN
98
n
131
GLN
98
A
LEU
99
n
132
LEU
99
A
ARG
100
n
133
ARG
100
A
PRO
101
n
134
PRO
101
A
LEU
102
n
135
LEU
102
A
LYS
103
n
136
LYS
103
A
VAL
104
n
137
VAL
104
A
ARG
105
n
138
ARG
105
A
ALA
106
n
139
ALA
106
A
ASN
107
n
140
ASN
107
A
LEU
108
n
141
LEU
108
A
VAL
109
n
142
VAL
109
A
VAL
110
n
143
VAL
110
A
PRO
111
n
144
PRO
111
A
MET
112
n
145
MET
112
A
VAL
113
n
146
VAL
113
A
ILE
114
n
147
ILE
114
A
ASP
115
n
148
ASP
115
A
ASP
116
n
149
ASP
116
A
GLN
117
n
150
GLN
117
A
LEU
118
n
151
LEU
118
A
PHE
119
n
152
PHE
119
A
GLY
120
n
153
GLY
120
A
LEU
121
n
154
LEU
121
A
LEU
122
n
155
LEU
122
A
ILE
123
n
156
ILE
123
A
ALA
124
n
157
ALA
124
A
HIS
125
n
158
HIS
125
A
GLN
126
n
159
GLN
126
A
CYS
127
n
160
CYS
127
A
SER
128
n
161
SER
128
A
GLU
129
n
162
GLU
129
A
PRO
130
n
163
PRO
130
A
ARG
131
n
164
ARG
131
A
GLN
132
n
165
GLN
132
A
TRP
133
n
166
TRP
133
A
GLN
134
n
167
GLN
134
A
GLU
135
n
168
GLU
135
A
ILE
136
n
169
ILE
136
A
GLU
137
n
170
GLU
137
A
ILE
138
n
171
ILE
138
A
ASP
139
n
172
ASP
139
A
GLN
140
n
173
GLN
140
A
PHE
141
n
174
PHE
141
A
SER
142
n
175
SER
142
A
GLU
143
n
176
GLU
143
A
LEU
144
n
177
LEU
144
A
ALA
145
n
178
ALA
145
A
SER
146
n
179
SER
146
A
THR
147
n
180
THR
147
A
GLY
148
n
181
GLY
148
A
SER
149
n
182
SER
149
A
LEU
150
n
183
LEU
150
A
VAL
151
n
184
VAL
151
A
LEU
152
n
185
LEU
152
A
GLU
153
n
186
GLU
153
A
ARG
154
n
187
ARG
154
A
LEU
155
n
188
LEU
155
A
HIS
156
n
189
HIS
156
A
PHE
157
n
190
PHE
157
A
LEU
158
n
191
LEU
158
A
n
192
159
A
n
193
160
A
n
194
161
A
n
195
162
A
n
196
163
A
n
1
-32
B
n
2
-31
B
n
3
-30
B
n
4
-29
B
n
5
-28
B
n
6
-27
B
n
7
-26
B
n
8
-25
B
n
9
-24
B
n
10
-23
B
n
11
-22
B
n
12
-21
B
n
13
-20
B
n
14
-19
B
n
15
-18
B
n
16
-17
B
n
17
-16
B
n
18
-15
B
n
19
-14
B
n
20
-13
B
n
21
-12
B
n
22
-11
B
n
23
-10
B
n
24
-9
B
n
25
-8
B
n
26
-7
B
n
27
-6
B
n
28
-5
B
n
29
-4
B
n
30
-3
B
n
31
-2
B
ASP
-1
n
32
ASP
-1
B
HIS
0
n
33
HIS
0
B
MET
1
n
34
MET
1
B
ALA
2
n
35
ALA
2
B
ALA
3
n
36
ALA
3
B
VAL
4
n
37
VAL
4
B
GLN
5
n
38
GLN
5
B
LEU
6
n
39
LEU
6
B
SER
7
n
40
SER
7
B
GLU
8
n
41
GLU
8
B
LEU
9
n
42
LEU
9
B
ARG
10
n
43
ARG
10
B
ASP
11
n
44
ASP
11
B
ARG
12
n
45
ARG
12
B
GLN
13
n
46
GLN
13
B
ALA
14
n
47
ALA
14
B
ILE
15
n
48
ILE
15
B
PHE
16
n
49
PHE
16
B
GLU
17
n
50
GLU
17
B
THR
18
n
51
THR
18
B
LEU
19
n
52
LEU
19
B
VAL
20
n
53
VAL
20
B
ALA
21
n
54
ALA
21
B
LYS
22
n
55
LYS
22
B
GLY
23
n
56
GLY
23
B
ARG
24
n
57
ARG
24
B
GLU
25
n
58
GLU
25
B
LEU
26
n
59
LEU
26
B
LEU
27
n
60
LEU
27
B
ALA
28
n
61
ALA
28
B
CYS
29
n
62
CYS
29
B
ASP
30
n
63
ASP
30
B
ARG
31
n
64
ARG
31
B
VAL
32
n
65
VAL
32
B
ILE
33
n
66
ILE
33
B
VAL
34
n
67
VAL
34
B
TYR
35
n
68
TYR
35
B
ALA
36
n
69
ALA
36
B
PHE
37
n
70
PHE
37
B
ASP
38
n
71
ASP
38
B
ASP
39
n
72
ASP
39
B
ASN
40
n
73
ASN
40
B
TYR
41
n
74
TYR
41
B
VAL
42
n
75
VAL
42
B
GLY
43
n
76
GLY
43
B
THR
44
n
77
THR
44
B
VAL
45
n
78
VAL
45
B
VAL
46
n
79
VAL
46
B
ALA
47
n
80
ALA
47
B
GLU
48
n
81
GLU
48
B
SER
49
n
82
SER
49
B
VAL
50
n
83
VAL
50
B
ALA
51
n
84
ALA
51
B
GLU
52
n
85
GLU
52
B
GLY
53
n
86
GLY
53
B
TRP
54
n
87
TRP
54
B
PRO
55
n
88
PRO
55
B
GLN
56
n
89
GLN
56
B
ALA
57
n
90
ALA
57
B
ARG
58
n
91
ARG
58
B
ASP
59
n
92
ASP
59
B
GLN
60
n
93
GLN
60
B
VAL
61
n
94
VAL
61
B
ILE
62
n
95
ILE
62
B
GLU
63
n
96
GLU
63
B
ASP
64
n
97
ASP
64
B
PRO
65
n
98
PRO
65
B
CYS
66
n
99
CYS
66
B
PHE
67
n
100
PHE
67
B
ARG
68
n
101
ARG
68
B
GLU
69
n
102
GLU
69
B
HIS
70
n
103
HIS
70
B
TRP
71
n
104
TRP
71
B
VAL
72
n
105
VAL
72
B
GLU
73
n
106
GLU
73
B
ALA
74
n
107
ALA
74
B
TYR
75
n
108
TYR
75
B
ARG
76
n
109
ARG
76
B
GLN
77
n
110
GLN
77
B
GLY
78
n
111
GLY
78
B
ARG
79
n
112
ARG
79
B
ILE
80
n
113
ILE
80
B
GLN
81
n
114
GLN
81
B
ALA
82
n
115
ALA
82
B
THR
83
n
116
THR
83
B
THR
84
n
117
THR
84
B
ASP
85
n
118
ASP
85
B
ILE
86
n
119
ILE
86
B
PHE
87
n
120
PHE
87
B
LYS
88
n
121
LYS
88
B
ALA
89
n
122
ALA
89
B
GLY
90
n
123
GLY
90
B
LEU
91
n
124
LEU
91
B
THR
92
n
125
THR
92
B
GLU
93
n
126
GLU
93
B
CYS
94
n
127
CYS
94
B
HIS
95
n
128
HIS
95
B
LEU
96
n
129
LEU
96
B
ASN
97
n
130
ASN
97
B
GLN
98
n
131
GLN
98
B
LEU
99
n
132
LEU
99
B
ARG
100
n
133
ARG
100
B
PRO
101
n
134
PRO
101
B
LEU
102
n
135
LEU
102
B
LYS
103
n
136
LYS
103
B
VAL
104
n
137
VAL
104
B
ARG
105
n
138
ARG
105
B
ALA
106
n
139
ALA
106
B
ASN
107
n
140
ASN
107
B
LEU
108
n
141
LEU
108
B
VAL
109
n
142
VAL
109
B
VAL
110
n
143
VAL
110
B
PRO
111
n
144
PRO
111
B
MET
112
n
145
MET
112
B
VAL
113
n
146
VAL
113
B
ILE
114
n
147
ILE
114
B
ASP
115
n
148
ASP
115
B
ASP
116
n
149
ASP
116
B
GLN
117
n
150
GLN
117
B
LEU
118
n
151
LEU
118
B
PHE
119
n
152
PHE
119
B
GLY
120
n
153
GLY
120
B
LEU
121
n
154
LEU
121
B
LEU
122
n
155
LEU
122
B
ILE
123
n
156
ILE
123
B
ALA
124
n
157
ALA
124
B
HIS
125
n
158
HIS
125
B
GLN
126
n
159
GLN
126
B
CYS
127
n
160
CYS
127
B
SER
128
n
161
SER
128
B
GLU
129
n
162
GLU
129
B
PRO
130
n
163
PRO
130
B
ARG
131
n
164
ARG
131
B
GLN
132
n
165
GLN
132
B
TRP
133
n
166
TRP
133
B
GLN
134
n
167
GLN
134
B
GLU
135
n
168
GLU
135
B
ILE
136
n
169
ILE
136
B
GLU
137
n
170
GLU
137
B
ILE
138
n
171
ILE
138
B
ASP
139
n
172
ASP
139
B
GLN
140
n
173
GLN
140
B
PHE
141
n
174
PHE
141
B
SER
142
n
175
SER
142
B
GLU
143
n
176
GLU
143
B
LEU
144
n
177
LEU
144
B
ALA
145
n
178
ALA
145
B
SER
146
n
179
SER
146
B
THR
147
n
180
THR
147
B
GLY
148
n
181
GLY
148
B
SER
149
n
182
SER
149
B
LEU
150
n
183
LEU
150
B
VAL
151
n
184
VAL
151
B
LEU
152
n
185
LEU
152
B
GLU
153
n
186
GLU
153
B
ARG
154
n
187
ARG
154
B
LEU
155
n
188
LEU
155
B
HIS
156
n
189
HIS
156
B
PHE
157
n
190
PHE
157
B
LEU
158
n
191
LEU
158
B
n
192
159
B
n
193
160
B
n
194
161
B
n
195
162
B
n
196
163
B
1.3597
-0.2149
-0.1438
0.9344
0.0424
2.4442
-0.0655
0.0616
-0.1102
-0.0774
-0.0259
0.0020
0.2378
-0.2546
0.0914
0.0796
-0.0635
0.0111
0.0839
-0.0310
0.0391
refined
-7.2250
-20.7900
-15.4150
X-RAY DIFFRACTION
1.2745
0.1685
0.4425
1.8400
0.4805
2.3896
0.0568
-0.0365
0.0697
0.3076
-0.0975
-0.0440
-0.2004
0.0316
0.0407
0.1235
-0.0587
-0.0177
0.0449
-0.0061
0.0802
refined
-13.2730
-44.2100
-41.2480
X-RAY DIFFRACTION
A
6
A
158
X-RAY DIFFRACTION
1
A
201
A
201
X-RAY DIFFRACTION
1
B
-1
B
158
X-RAY DIFFRACTION
2
B
201
B
201
X-RAY DIFFRACTION
2
author_and_software_defined_assembly
PISA
2
dimeric
author_defined_assembly
2
dimeric
1630
-9
16050
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-0.5000000000
0.8660254038
0.0000000000
-0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
3_545
-x+y,-x-1,z+1/3
crystal symmetry operation
36.4340000000
-63.1055391230
55.5556666667
-0.5000000000
-0.8660254038
0.0000000000
0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
2_444
-y-1,x-y-1,z-1/3
crystal symmetry operation
-36.4340000000
-63.1055391230
-55.5556666667
A
O
SER
49
A
O
SER
82
A
N
VAL
32
A
N
VAL
65
A
N
ARG
31
A
N
ARG
64
A
O
HIS
125
A
O
HIS
158
A
O
LEU
122
A
O
LEU
155
A
N
VAL
110
A
N
VAL
143
A
O
ASN
107
A
O
ASN
140
A
N
THR
83
A
N
THR
116
B
O
SER
49
B
O
SER
82
B
N
VAL
32
B
N
VAL
65
B
N
ILE
33
B
N
ILE
66
B
O
ILE
123
B
O
ILE
156
B
O
GLY
120
B
O
GLY
153
B
N
MET
112
B
N
MET
145
B
O
ASN
107
B
O
ASN
140
B
N
THR
83
B
N
THR
116
1
A
MET
-32
A
MET
1
1
Y
1
A
GLY
-31
A
GLY
2
1
Y
1
A
GLY
-30
A
GLY
3
1
Y
1
A
SER
-29
A
SER
4
1
Y
1
A
HIS
-28
A
HIS
5
1
Y
1
A
HIS
-27
A
HIS
6
1
Y
1
A
HIS
-26
A
HIS
7
1
Y
1
A
HIS
-25
A
HIS
8
1
Y
1
A
HIS
-24
A
HIS
9
1
Y
1
A
HIS
-23
A
HIS
10
1
Y
1
A
GLY
-22
A
GLY
11
1
Y
1
A
MET
-21
A
MET
12
1
Y
1
A
ALA
-20
A
ALA
13
1
Y
1
A
SER
-19
A
SER
14
1
Y
1
A
MET
-18
A
MET
15
1
Y
1
A
THR
-17
A
THR
16
1
Y
1
A
GLY
-16
A
GLY
17
1
Y
1
A
GLY
-15
A
GLY
18
1
Y
1
A
GLN
-14
A
GLN
19
1
Y
1
A
GLN
-13
A
GLN
20
1
Y
1
A
MET
-12
A
MET
21
1
Y
1
A
GLY
-11
A
GLY
22
1
Y
1
A
ARG
-10
A
ARG
23
1
Y
1
A
ASP
-9
A
ASP
24
1
Y
1
A
LEU
-8
A
LEU
25
1
Y
1
A
TYR
-7
A
TYR
26
1
Y
1
A
ASP
-6
A
ASP
27
1
Y
1
A
ASP
-5
A
ASP
28
1
Y
1
A
ASP
-4
A
ASP
29
1
Y
1
A
ASP
-3
A
ASP
30
1
Y
1
A
LYS
-2
A
LYS
31
1
Y
1
A
ASP
-1
A
ASP
32
1
Y
1
A
HIS
0
A
HIS
33
1
Y
1
A
MET
1
A
MET
34
1
Y
1
A
ALA
2
A
ALA
35
1
Y
1
A
ALA
3
A
ALA
36
1
Y
1
A
VAL
4
A
VAL
37
1
Y
1
A
GLN
5
A
GLN
38
1
Y
1
A
GLU
159
A
GLU
192
1
Y
1
A
GLN
160
A
GLN
193
1
Y
1
A
THR
161
A
THR
194
1
Y
1
A
ILE
162
A
ILE
195
1
Y
1
A
ALA
163
A
ALA
196
1
Y
1
B
MET
-32
B
MET
1
1
Y
1
B
GLY
-31
B
GLY
2
1
Y
1
B
GLY
-30
B
GLY
3
1
Y
1
B
SER
-29
B
SER
4
1
Y
1
B
HIS
-28
B
HIS
5
1
Y
1
B
HIS
-27
B
HIS
6
1
Y
1
B
HIS
-26
B
HIS
7
1
Y
1
B
HIS
-25
B
HIS
8
1
Y
1
B
HIS
-24
B
HIS
9
1
Y
1
B
HIS
-23
B
HIS
10
1
Y
1
B
GLY
-22
B
GLY
11
1
Y
1
B
MET
-21
B
MET
12
1
Y
1
B
ALA
-20
B
ALA
13
1
Y
1
B
SER
-19
B
SER
14
1
Y
1
B
MET
-18
B
MET
15
1
Y
1
B
THR
-17
B
THR
16
1
Y
1
B
GLY
-16
B
GLY
17
1
Y
1
B
GLY
-15
B
GLY
18
1
Y
1
B
GLN
-14
B
GLN
19
1
Y
1
B
GLN
-13
B
GLN
20
1
Y
1
B
MET
-12
B
MET
21
1
Y
1
B
GLY
-11
B
GLY
22
1
Y
1
B
ARG
-10
B
ARG
23
1
Y
1
B
ASP
-9
B
ASP
24
1
Y
1
B
LEU
-8
B
LEU
25
1
Y
1
B
TYR
-7
B
TYR
26
1
Y
1
B
ASP
-6
B
ASP
27
1
Y
1
B
ASP
-5
B
ASP
28
1
Y
1
B
ASP
-4
B
ASP
29
1
Y
1
B
ASP
-3
B
ASP
30
1
Y
1
B
LYS
-2
B
LYS
31
1
Y
1
B
GLU
159
B
GLU
192
1
Y
1
B
GLN
160
B
GLN
193
1
Y
1
B
THR
161
B
THR
194
1
Y
1
B
ILE
162
B
ILE
195
1
Y
1
B
ALA
163
B
ALA
196
1
Y
1
B
C4
PVG
201
PLANAR
1
A
A
O
O
HOH
HOH
374
377
1.82
1
A
ARG
31
0.095
SIDE CHAIN
1
B
ARG
31
0.074
SIDE CHAIN
1
-3.88
0.50
120.30
116.42
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
31
31
31
N
1
-4.17
0.50
120.30
116.13
B
B
B
NE
CZ
NH2
ARG
ARG
ARG
31
31
31
N
1
A
B
CD1
CE
ILE
MET
80
1
2.19
1_555
3_545
1
A
ASP
64
-161.27
111.50
1
B
ASP
64
-162.90
109.70
138.520
45.750
17.870
-0.1300
-0.0600
0.0000
-0.1300
0.0000
0.1900
0.9630
0.9500
HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT U VALUES: RESIDUAL ONLY
0.2232
0.1855
0.1874
2.0000
59.0200
1606
30434
32040
5.0000
94.9000
1.000
0.500
6.9940
0.0970
RANDOM
1
THROUGHOUT
0.000
MOLECULAR REPLACEMENT
0.1440
0.1390
0.8000
0.8000
1.2000
MAXIMUM LIKELIHOOD
MASK
2.0000
59.0200
111
2739
106
0
2522
0.020
0.020
2680
1.495
1.988
3650
7.173
5.000
311
40.290
23.942
137
18.522
15.000
438
20.623
15.000
24
0.120
0.200
400
0.016
0.021
2060
1
A
1
655
X-RAY DIFFRACTION
MEDIUM POSITIONAL
0.140
0.500
1
A
1
623
X-RAY DIFFRACTION
LOOSE POSITIONAL
0.470
5.000
1
A
1
655
X-RAY DIFFRACTION
MEDIUM THERMAL
3.290
2.000
1
A
1
623
X-RAY DIFFRACTION
LOOSE THERMAL
6.220
10.000
0.3030
0.2600
2.0520
95
1898
1993
20
79.5600
1.95
100
3VV4
39334
36534
0
2
1
92.88
0.566
1.95
2.02
2.2
1
71.0
data collection
ADSC
Quantum
phasing
MOLREP
refinement
REFMAC
5.6.0117
data reduction
HKL-2000
data scaling
HKL-2000
Methyl-accepting chemotaxis protein
Crystal structure of cyanobacteriochrome TePixJ GAF domain
1
N
N
1
N
N
2
N
N
3
N
N
3
N
N
3
N
N
2
N
N
3
N
N
4
N
N
4
N
N
A
ASP
11
A
ASP
44
HELX_P
A
ALA
28
A
ALA
61
1
1
18
A
GLN
56
A
GLN
89
HELX_P
A
GLN
60
A
GLN
93
5
2
5
A
GLU
69
A
GLU
102
HELX_P
A
GLN
77
A
GLN
110
1
3
9
A
ASP
85
A
ASP
118
HELX_P
A
ALA
89
A
ALA
122
5
4
5
A
THR
92
A
THR
125
HELX_P
A
ARG
100
A
ARG
133
1
5
9
A
PRO
101
A
PRO
134
HELX_P
A
LYS
103
A
LYS
136
5
6
3
A
GLN
134
A
GLN
167
HELX_P
A
LEU
158
A
LEU
191
1
7
25
B
GLN
5
B
GLN
38
HELX_P
B
LEU
9
B
LEU
42
5
8
5
B
ASP
11
B
ASP
44
HELX_P
B
ALA
28
B
ALA
61
1
9
18
B
GLN
56
B
GLN
89
HELX_P
B
GLN
60
B
GLN
93
5
10
5
B
HIS
70
B
HIS
103
HELX_P
B
GLN
77
B
GLN
110
1
11
8
B
ASP
85
B
ASP
118
HELX_P
B
ALA
89
B
ALA
122
5
12
5
B
THR
92
B
THR
125
HELX_P
B
ARG
100
B
ARG
133
1
13
9
B
PRO
101
B
PRO
134
HELX_P
B
LYS
103
B
LYS
136
5
14
3
B
GLN
134
B
GLN
167
HELX_P
B
LEU
158
B
LEU
191
1
15
25
disulf
2.045
A
CYS
66
A
SG
CYS
99
1_555
B
CYS
66
B
SG
CYS
99
1_555
covale
2.025
A
CYS
94
A
SG
CYS
127
1_555
A
PVG
201
C
C31
PVG
1_555
covale
2.160
B
CYS
94
B
SG
CYS
127
1_555
B
PVG
201
G
C31
PVG
1_555
SIGNALING PROTEIN
cyanobacteriochrome, phycoviolobilin binding, SIGNALING PROTEIN
A
B
A
6
A
201
3
B
6
B
201
3
Q8DLC7_THEEB
UNP
1
430
Q8DLC7
AAVQLSELRDRQAIFETLVAKGRELLACDRVIVYAFDDNYVGTVVAESVAEGWPQARDQVIEDPCFREHWVEAYRQGRIQ
ATTDIFKAGLTECHLNQLRPLKVRANLVVPMVIDDQLFGLLIAHQCSEPRQWQEIEIDQFSELASTGSLVLERLHFLEQT
IA
430
591
3VV4
2
163
Q8DLC7
A
1
35
196
430
591
3VV4
2
163
Q8DLC7
B
1
35
196
1
EXPRESSION TAG
MET
-32
3VV4
A
Q8DLC7
UNP
1
1
EXPRESSION TAG
GLY
-31
3VV4
A
Q8DLC7
UNP
2
1
EXPRESSION TAG
GLY
-30
3VV4
A
Q8DLC7
UNP
3
1
EXPRESSION TAG
SER
-29
3VV4
A
Q8DLC7
UNP
4
1
EXPRESSION TAG
HIS
-28
3VV4
A
Q8DLC7
UNP
5
1
EXPRESSION TAG
HIS
-27
3VV4
A
Q8DLC7
UNP
6
1
EXPRESSION TAG
HIS
-26
3VV4
A
Q8DLC7
UNP
7
1
EXPRESSION TAG
HIS
-25
3VV4
A
Q8DLC7
UNP
8
1
EXPRESSION TAG
HIS
-24
3VV4
A
Q8DLC7
UNP
9
1
EXPRESSION TAG
HIS
-23
3VV4
A
Q8DLC7
UNP
10
1
EXPRESSION TAG
GLY
-22
3VV4
A
Q8DLC7
UNP
11
1
EXPRESSION TAG
MET
-21
3VV4
A
Q8DLC7
UNP
12
1
EXPRESSION TAG
ALA
-20
3VV4
A
Q8DLC7
UNP
13
1
EXPRESSION TAG
SER
-19
3VV4
A
Q8DLC7
UNP
14
1
EXPRESSION TAG
MET
-18
3VV4
A
Q8DLC7
UNP
15
1
EXPRESSION TAG
THR
-17
3VV4
A
Q8DLC7
UNP
16
1
EXPRESSION TAG
GLY
-16
3VV4
A
Q8DLC7
UNP
17
1
EXPRESSION TAG
GLY
-15
3VV4
A
Q8DLC7
UNP
18
1
EXPRESSION TAG
GLN
-14
3VV4
A
Q8DLC7
UNP
19
1
EXPRESSION TAG
GLN
-13
3VV4
A
Q8DLC7
UNP
20
1
EXPRESSION TAG
MET
-12
3VV4
A
Q8DLC7
UNP
21
1
EXPRESSION TAG
GLY
-11
3VV4
A
Q8DLC7
UNP
22
1
EXPRESSION TAG
ARG
-10
3VV4
A
Q8DLC7
UNP
23
1
EXPRESSION TAG
ASP
-9
3VV4
A
Q8DLC7
UNP
24
1
EXPRESSION TAG
LEU
-8
3VV4
A
Q8DLC7
UNP
25
1
EXPRESSION TAG
TYR
-7
3VV4
A
Q8DLC7
UNP
26
1
EXPRESSION TAG
ASP
-6
3VV4
A
Q8DLC7
UNP
27
1
EXPRESSION TAG
ASP
-5
3VV4
A
Q8DLC7
UNP
28
1
EXPRESSION TAG
ASP
-4
3VV4
A
Q8DLC7
UNP
29
1
EXPRESSION TAG
ASP
-3
3VV4
A
Q8DLC7
UNP
30
1
EXPRESSION TAG
LYS
-2
3VV4
A
Q8DLC7
UNP
31
1
EXPRESSION TAG
ASP
-1
3VV4
A
Q8DLC7
UNP
32
1
EXPRESSION TAG
HIS
0
3VV4
A
Q8DLC7
UNP
33
1
EXPRESSION TAG
MET
1
3VV4
A
Q8DLC7
UNP
34
2
EXPRESSION TAG
MET
-32
3VV4
B
Q8DLC7
UNP
1
2
EXPRESSION TAG
GLY
-31
3VV4
B
Q8DLC7
UNP
2
2
EXPRESSION TAG
GLY
-30
3VV4
B
Q8DLC7
UNP
3
2
EXPRESSION TAG
SER
-29
3VV4
B
Q8DLC7
UNP
4
2
EXPRESSION TAG
HIS
-28
3VV4
B
Q8DLC7
UNP
5
2
EXPRESSION TAG
HIS
-27
3VV4
B
Q8DLC7
UNP
6
2
EXPRESSION TAG
HIS
-26
3VV4
B
Q8DLC7
UNP
7
2
EXPRESSION TAG
HIS
-25
3VV4
B
Q8DLC7
UNP
8
2
EXPRESSION TAG
HIS
-24
3VV4
B
Q8DLC7
UNP
9
2
EXPRESSION TAG
HIS
-23
3VV4
B
Q8DLC7
UNP
10
2
EXPRESSION TAG
GLY
-22
3VV4
B
Q8DLC7
UNP
11
2
EXPRESSION TAG
MET
-21
3VV4
B
Q8DLC7
UNP
12
2
EXPRESSION TAG
ALA
-20
3VV4
B
Q8DLC7
UNP
13
2
EXPRESSION TAG
SER
-19
3VV4
B
Q8DLC7
UNP
14
2
EXPRESSION TAG
MET
-18
3VV4
B
Q8DLC7
UNP
15
2
EXPRESSION TAG
THR
-17
3VV4
B
Q8DLC7
UNP
16
2
EXPRESSION TAG
GLY
-16
3VV4
B
Q8DLC7
UNP
17
2
EXPRESSION TAG
GLY
-15
3VV4
B
Q8DLC7
UNP
18
2
EXPRESSION TAG
GLN
-14
3VV4
B
Q8DLC7
UNP
19
2
EXPRESSION TAG
GLN
-13
3VV4
B
Q8DLC7
UNP
20
2
EXPRESSION TAG
MET
-12
3VV4
B
Q8DLC7
UNP
21
2
EXPRESSION TAG
GLY
-11
3VV4
B
Q8DLC7
UNP
22
2
EXPRESSION TAG
ARG
-10
3VV4
B
Q8DLC7
UNP
23
2
EXPRESSION TAG
ASP
-9
3VV4
B
Q8DLC7
UNP
24
2
EXPRESSION TAG
LEU
-8
3VV4
B
Q8DLC7
UNP
25
2
EXPRESSION TAG
TYR
-7
3VV4
B
Q8DLC7
UNP
26
2
EXPRESSION TAG
ASP
-6
3VV4
B
Q8DLC7
UNP
27
2
EXPRESSION TAG
ASP
-5
3VV4
B
Q8DLC7
UNP
28
2
EXPRESSION TAG
ASP
-4
3VV4
B
Q8DLC7
UNP
29
2
EXPRESSION TAG
ASP
-3
3VV4
B
Q8DLC7
UNP
30
2
EXPRESSION TAG
LYS
-2
3VV4
B
Q8DLC7
UNP
31
2
EXPRESSION TAG
ASP
-1
3VV4
B
Q8DLC7
UNP
32
2
EXPRESSION TAG
HIS
0
3VV4
B
Q8DLC7
UNP
33
2
EXPRESSION TAG
MET
1
3VV4
B
Q8DLC7
UNP
34
5
5
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
GLY
43
A
GLY
76
A
VAL
50
A
VAL
83
A
ARG
31
A
ARG
64
A
PHE
37
A
PHE
70
A
GLN
117
A
GLN
150
A
GLN
126
A
GLN
159
A
ALA
106
A
ALA
139
A
ILE
114
A
ILE
147
A
GLN
81
A
GLN
114
A
THR
83
A
THR
116
B
GLY
43
B
GLY
76
B
VAL
50
B
VAL
83
B
ARG
31
B
ARG
64
B
PHE
37
B
PHE
70
B
GLN
117
B
GLN
150
B
GLN
126
B
GLN
159
B
ALA
106
B
ALA
139
B
ILE
114
B
ILE
147
B
GLN
81
B
GLN
114
B
THR
83
B
THR
116
BINDING SITE FOR RESIDUE PVG A 201
Software
19
BINDING SITE FOR RESIDUE SO4 A 202
Software
2
BINDING SITE FOR RESIDUE SO4 A 203
Software
2
BINDING SITE FOR RESIDUE SO4 A 204
Software
1
BINDING SITE FOR RESIDUE PVG B 201
Software
19
BINDING SITE FOR RESIDUE SO4 B 202
Software
3
A
TYR
35
A
TYR
68
19
1_555
A
VAL
45
A
VAL
78
19
1_555
A
GLU
63
A
GLU
96
19
1_555
A
ASP
64
A
ASP
97
19
1_555
A
PRO
65
A
PRO
98
19
1_555
A
GLU
69
A
GLU
102
19
1_555
A
TRP
71
A
TRP
104
19
1_555
A
ARG
79
A
ARG
112
19
1_555
A
GLN
81
A
GLN
114
19
1_555
A
CYS
94
A
CYS
127
19
1_555
A
HIS
95
A
HIS
128
19
1_555
A
GLN
98
A
GLN
131
19
1_555
A
ASN
107
A
ASN
140
19
1_555
A
HOH
311
I
HOH
19
1_555
A
HOH
319
I
HOH
19
1_555
A
HOH
321
I
HOH
19
1_555
A
HOH
334
I
HOH
19
1_555
A
HOH
351
I
HOH
19
6_554
A
HOH
361
I
HOH
19
1_555
A
ARG
24
A
ARG
57
2
1_555
A
GLU
52
A
GLU
85
2
1_555
A
THR
84
A
THR
117
2
1_555
A
GLN
132
A
GLN
165
2
1_555
A
ARG
105
A
ARG
138
1
1_555
B
ILE
33
B
ILE
66
19
1_555
B
TYR
35
B
TYR
68
19
1_555
B
VAL
45
B
VAL
78
19
1_555
B
ILE
62
B
ILE
95
19
1_555
B
GLU
63
B
GLU
96
19
1_555
B
ASP
64
B
ASP
97
19
1_555
B
PRO
65
B
PRO
98
19
1_555
B
GLU
69
B
GLU
102
19
1_555
B
TRP
71
B
TRP
104
19
1_555
B
ARG
79
B
ARG
112
19
1_555
B
GLN
81
B
GLN
114
19
1_555
B
CYS
94
B
CYS
127
19
1_555
B
HIS
95
B
HIS
128
19
1_555
B
GLN
98
B
GLN
131
19
1_555
B
LEU
102
B
LEU
135
19
1_555
B
ASN
107
B
ASN
140
19
1_555
B
HOH
307
J
HOH
19
1_555
B
HOH
309
J
HOH
19
1_555
B
HOH
316
J
HOH
19
1_555
B
ARG
24
B
ARG
57
3
1_555
B
ALA
51
B
ALA
84
3
1_555
B
GLU
52
B
GLU
85
3
1_555
170
P 65