0.011783
0.000000
0.000354
0.000000
0.024146
0.000000
0.000000
0.000000
0.023096
0.00000
0.00000
0.00000
Higashiura, A.
Nakagawa, A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
91.72
90.00
84.870
41.415
43.317
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C3 H8 O3
92.094
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
C
N
138
N
O
N
139
N
C
N
140
N
O
N
141
N
C
N
142
N
O
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
N
N
152
S
C
N
153
N
C
N
154
N
O
N
155
N
C
Y
156
N
C
Y
157
N
N
Y
158
N
C
Y
159
N
C
Y
160
N
N
N
161
N
O
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
O
N
173
N
H
N
174
N
H
N
175
N
N
N
176
S
C
N
177
N
C
N
178
N
O
N
179
S
C
N
180
N
C
N
181
N
C
N
182
N
C
N
183
N
O
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
N
N
198
S
C
N
199
N
C
N
200
N
O
N
201
N
C
N
202
N
C
N
203
N
C
N
204
N
C
N
205
N
O
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
N
N
220
S
C
N
221
N
C
N
222
N
O
N
223
N
C
N
224
N
C
N
225
N
C
N
226
N
C
N
227
N
N
N
228
N
O
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
N
N
245
S
C
N
246
N
C
N
247
N
O
N
248
N
C
N
249
N
C
N
250
N
S
N
251
N
C
N
252
N
O
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
N
N
265
S
C
N
266
N
C
N
267
N
O
N
268
N
C
Y
269
N
C
Y
270
N
C
Y
271
N
C
Y
272
N
C
Y
273
N
C
Y
274
N
C
N
275
N
O
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
N
N
288
S
C
N
289
N
C
N
290
N
O
N
291
N
C
N
292
N
C
N
293
N
C
N
294
N
O
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
N
C
N
309
N
O
N
310
N
O
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
N
N
319
S
C
N
320
N
C
N
321
N
O
N
322
R
C
N
323
N
O
N
324
N
C
N
325
N
O
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
N
N
336
S
C
N
337
N
C
N
338
N
O
N
339
N
C
Y
340
N
C
Y
341
N
C
Y
342
N
C
Y
343
N
N
Y
344
N
C
Y
345
N
C
Y
346
N
C
Y
347
N
C
Y
348
N
C
N
349
N
O
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
N
N
363
S
C
N
364
N
C
N
365
N
O
N
366
N
C
Y
367
N
C
Y
368
N
C
Y
369
N
C
Y
370
N
C
Y
371
N
C
Y
372
N
C
N
373
N
O
N
374
N
O
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
N
N
387
S
C
N
388
N
C
N
389
N
O
N
390
N
C
N
391
N
C
N
392
N
C
N
393
N
O
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
doub
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
Y
153
N
sing
Y
154
N
doub
Y
155
N
doub
N
156
N
sing
Y
157
N
sing
N
158
N
sing
Y
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
doub
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
doub
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
doub
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
doub
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
doub
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
Y
261
N
doub
Y
262
N
sing
Y
263
N
sing
N
264
N
sing
Y
265
N
doub
N
266
N
sing
Y
267
N
doub
N
268
N
sing
Y
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
doub
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
doub
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
doub
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
Y
330
N
doub
Y
331
N
sing
Y
332
N
sing
N
333
N
sing
Y
334
N
doub
Y
335
N
sing
Y
336
N
sing
N
337
N
sing
Y
338
N
sing
Y
339
N
doub
N
340
N
sing
Y
341
N
doub
N
342
N
sing
Y
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
doub
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
Y
358
N
doub
Y
359
N
sing
Y
360
N
sing
N
361
N
sing
Y
362
N
doub
N
363
N
sing
Y
364
N
doub
N
365
N
sing
Y
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
doub
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
DK
J.SYNCHROTRON RADIAT.
JSYRES
1210
0909-0495
20
989
993
10.1107/S090904951302373X
24121354
High-resolution X-ray crystal structure of bovine H-protein using the high-pressure cryocooling method
2013
10.2210/pdb3wdn/pdb
pdb_00003wdn
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
90
1
CCD
2011-04-24
RAYONIX MX225HE
Si 111 CHANNEL
SINGLE WAVELENGTH
M
x-ray
1
0.7
1.0
BL44XU
SPring-8
0.7
SYNCHROTRON
SPRING-8 BEAMLINE BL44XU
13858.369
Glycine cleavage system H protein, mitochondrial
1
man
polymer
92.094
GLYCEROL
2
syn
non-polymer
18.015
water
292
nat
water
no
no
SVRKFTEKHEWVTTENGVGTVGISNFAQEALGDVVYCSLPEVGTKLNKQEEFGALESVKAASELYSPLSGEVTEINKALA
ENPGLVNKSCYEDGWLIKMTFSNPSELDELMSEEAYEKYIKSIEE
SVRKFTEKHEWVTTENGVGTVGISNFAQEALGDVVYCSLPEVGTKLNKQEEFGALESVKAASELYSPLSGEVTEINKALA
ENPGLVNKSCYEDGWLIKMTFSNPSELDELMSEEAYEKYIKSIEE
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
bovine,cow,domestic cattle,domestic cow
sample
GCSH
9913
Bos taurus
562
Escherichia coli
Bl21(de3)
Plasmid
pET30a
1
2.75
55.20
VAPOR DIFFUSION, HANGING DROP
3.0
0.6-1.6M ammonium sulphate, 0-30% glycerol, 0.1M sodium citrate, pH 3.0, VAPOR DIFFUSION, HANGING DROP, temperature 288K
288
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_site
repository
Initial release
Other
Data collection
Database references
Derived calculations
Refinement description
1
0
2013-10-30
1
1
2013-12-11
1
2
2023-11-08
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
PDBJ
Y
PDBJ
2013-06-19
REL
REL
GOL
GLYCEROL
HOH
water
3KLR
PDB
experimental model
GOL
1
2
GOL
GOL
201
A
GOL
2
2
GOL
GOL
202
A
HOH
1
3
HOH
HOH
301
A
HOH
2
3
HOH
HOH
302
A
HOH
3
3
HOH
HOH
303
A
HOH
4
3
HOH
HOH
304
A
HOH
5
3
HOH
HOH
305
A
HOH
6
3
HOH
HOH
306
A
HOH
7
3
HOH
HOH
307
A
HOH
8
3
HOH
HOH
308
A
HOH
9
3
HOH
HOH
309
A
HOH
10
3
HOH
HOH
310
A
HOH
11
3
HOH
HOH
311
A
HOH
12
3
HOH
HOH
312
A
HOH
13
3
HOH
HOH
313
A
HOH
14
3
HOH
HOH
314
A
HOH
15
3
HOH
HOH
315
A
HOH
16
3
HOH
HOH
316
A
HOH
17
3
HOH
HOH
317
A
HOH
18
3
HOH
HOH
318
A
HOH
19
3
HOH
HOH
319
A
HOH
20
3
HOH
HOH
320
A
HOH
21
3
HOH
HOH
321
A
HOH
22
3
HOH
HOH
322
A
HOH
23
3
HOH
HOH
323
A
HOH
24
3
HOH
HOH
324
A
HOH
25
3
HOH
HOH
325
A
HOH
26
3
HOH
HOH
326
A
HOH
27
3
HOH
HOH
327
A
HOH
28
3
HOH
HOH
328
A
HOH
29
3
HOH
HOH
329
A
HOH
30
3
HOH
HOH
330
A
HOH
31
3
HOH
HOH
331
A
HOH
32
3
HOH
HOH
332
A
HOH
33
3
HOH
HOH
333
A
HOH
34
3
HOH
HOH
334
A
HOH
35
3
HOH
HOH
335
A
HOH
36
3
HOH
HOH
336
A
HOH
37
3
HOH
HOH
337
A
HOH
38
3
HOH
HOH
338
A
HOH
39
3
HOH
HOH
339
A
HOH
40
3
HOH
HOH
340
A
HOH
41
3
HOH
HOH
341
A
HOH
42
3
HOH
HOH
342
A
HOH
43
3
HOH
HOH
343
A
HOH
44
3
HOH
HOH
344
A
HOH
45
3
HOH
HOH
345
A
HOH
46
3
HOH
HOH
346
A
HOH
47
3
HOH
HOH
347
A
HOH
48
3
HOH
HOH
348
A
HOH
49
3
HOH
HOH
349
A
HOH
50
3
HOH
HOH
350
A
HOH
51
3
HOH
HOH
351
A
HOH
52
3
HOH
HOH
352
A
HOH
53
3
HOH
HOH
353
A
HOH
54
3
HOH
HOH
354
A
HOH
55
3
HOH
HOH
355
A
HOH
56
3
HOH
HOH
356
A
HOH
57
3
HOH
HOH
357
A
HOH
58
3
HOH
HOH
358
A
HOH
59
3
HOH
HOH
359
A
HOH
60
3
HOH
HOH
360
A
HOH
61
3
HOH
HOH
361
A
HOH
62
3
HOH
HOH
362
A
HOH
63
3
HOH
HOH
363
A
HOH
64
3
HOH
HOH
364
A
HOH
65
3
HOH
HOH
365
A
HOH
66
3
HOH
HOH
366
A
HOH
67
3
HOH
HOH
367
A
HOH
68
3
HOH
HOH
368
A
HOH
69
3
HOH
HOH
369
A
HOH
70
3
HOH
HOH
370
A
HOH
71
3
HOH
HOH
371
A
HOH
72
3
HOH
HOH
372
A
HOH
73
3
HOH
HOH
373
A
HOH
74
3
HOH
HOH
374
A
HOH
75
3
HOH
HOH
375
A
HOH
76
3
HOH
HOH
376
A
HOH
77
3
HOH
HOH
377
A
HOH
78
3
HOH
HOH
378
A
HOH
79
3
HOH
HOH
379
A
HOH
80
3
HOH
HOH
380
A
HOH
81
3
HOH
HOH
381
A
HOH
82
3
HOH
HOH
382
A
HOH
83
3
HOH
HOH
383
A
HOH
84
3
HOH
HOH
384
A
HOH
85
3
HOH
HOH
385
A
HOH
86
3
HOH
HOH
386
A
HOH
87
3
HOH
HOH
387
A
HOH
88
3
HOH
HOH
388
A
HOH
89
3
HOH
HOH
389
A
HOH
90
3
HOH
HOH
390
A
HOH
91
3
HOH
HOH
391
A
HOH
92
3
HOH
HOH
392
A
HOH
93
3
HOH
HOH
393
A
HOH
94
3
HOH
HOH
394
A
HOH
95
3
HOH
HOH
395
A
HOH
96
3
HOH
HOH
396
A
HOH
97
3
HOH
HOH
397
A
HOH
98
3
HOH
HOH
398
A
HOH
99
3
HOH
HOH
399
A
HOH
100
3
HOH
HOH
400
A
HOH
101
3
HOH
HOH
401
A
HOH
102
3
HOH
HOH
402
A
HOH
103
3
HOH
HOH
403
A
HOH
104
3
HOH
HOH
404
A
HOH
105
3
HOH
HOH
405
A
HOH
106
3
HOH
HOH
406
A
HOH
107
3
HOH
HOH
407
A
HOH
108
3
HOH
HOH
408
A
HOH
109
3
HOH
HOH
409
A
HOH
110
3
HOH
HOH
410
A
HOH
111
3
HOH
HOH
411
A
HOH
112
3
HOH
HOH
412
A
HOH
113
3
HOH
HOH
413
A
HOH
114
3
HOH
HOH
414
A
HOH
115
3
HOH
HOH
415
A
HOH
116
3
HOH
HOH
416
A
HOH
117
3
HOH
HOH
417
A
HOH
118
3
HOH
HOH
418
A
HOH
119
3
HOH
HOH
419
A
HOH
120
3
HOH
HOH
420
A
HOH
121
3
HOH
HOH
421
A
HOH
122
3
HOH
HOH
422
A
HOH
123
3
HOH
HOH
423
A
HOH
124
3
HOH
HOH
424
A
HOH
125
3
HOH
HOH
425
A
HOH
126
3
HOH
HOH
426
A
HOH
127
3
HOH
HOH
427
A
HOH
128
3
HOH
HOH
428
A
HOH
129
3
HOH
HOH
429
A
HOH
130
3
HOH
HOH
430
A
HOH
131
3
HOH
HOH
431
A
HOH
132
3
HOH
HOH
432
A
HOH
133
3
HOH
HOH
433
A
HOH
134
3
HOH
HOH
434
A
HOH
135
3
HOH
HOH
435
A
HOH
136
3
HOH
HOH
436
A
HOH
137
3
HOH
HOH
437
A
HOH
138
3
HOH
HOH
438
A
HOH
139
3
HOH
HOH
439
A
HOH
140
3
HOH
HOH
440
A
HOH
141
3
HOH
HOH
441
A
HOH
142
3
HOH
HOH
442
A
HOH
143
3
HOH
HOH
443
A
HOH
144
3
HOH
HOH
444
A
HOH
145
3
HOH
HOH
445
A
HOH
146
3
HOH
HOH
446
A
HOH
147
3
HOH
HOH
447
A
HOH
148
3
HOH
HOH
448
A
HOH
149
3
HOH
HOH
449
A
HOH
150
3
HOH
HOH
450
A
HOH
151
3
HOH
HOH
451
A
HOH
152
3
HOH
HOH
452
A
HOH
153
3
HOH
HOH
453
A
HOH
154
3
HOH
HOH
454
A
HOH
155
3
HOH
HOH
455
A
HOH
156
3
HOH
HOH
456
A
HOH
157
3
HOH
HOH
457
A
HOH
158
3
HOH
HOH
458
A
HOH
159
3
HOH
HOH
459
A
HOH
160
3
HOH
HOH
460
A
HOH
161
3
HOH
HOH
461
A
HOH
162
3
HOH
HOH
462
A
HOH
163
3
HOH
HOH
463
A
HOH
164
3
HOH
HOH
464
A
HOH
165
3
HOH
HOH
465
A
HOH
166
3
HOH
HOH
466
A
HOH
167
3
HOH
HOH
467
A
HOH
168
3
HOH
HOH
468
A
HOH
169
3
HOH
HOH
469
A
HOH
170
3
HOH
HOH
470
A
HOH
171
3
HOH
HOH
471
A
HOH
172
3
HOH
HOH
472
A
HOH
173
3
HOH
HOH
473
A
HOH
174
3
HOH
HOH
474
A
HOH
175
3
HOH
HOH
475
A
HOH
176
3
HOH
HOH
476
A
HOH
177
3
HOH
HOH
477
A
HOH
178
3
HOH
HOH
478
A
HOH
179
3
HOH
HOH
479
A
HOH
180
3
HOH
HOH
480
A
HOH
181
3
HOH
HOH
481
A
HOH
182
3
HOH
HOH
482
A
HOH
183
3
HOH
HOH
483
A
HOH
184
3
HOH
HOH
484
A
HOH
185
3
HOH
HOH
485
A
HOH
186
3
HOH
HOH
486
A
HOH
187
3
HOH
HOH
487
A
HOH
188
3
HOH
HOH
488
A
HOH
189
3
HOH
HOH
489
A
HOH
190
3
HOH
HOH
490
A
HOH
191
3
HOH
HOH
491
A
HOH
192
3
HOH
HOH
492
A
HOH
193
3
HOH
HOH
493
A
HOH
194
3
HOH
HOH
494
A
HOH
195
3
HOH
HOH
495
A
HOH
196
3
HOH
HOH
496
A
HOH
197
3
HOH
HOH
497
A
HOH
198
3
HOH
HOH
498
A
HOH
199
3
HOH
HOH
499
A
HOH
200
3
HOH
HOH
500
A
HOH
201
3
HOH
HOH
501
A
HOH
202
3
HOH
HOH
502
A
HOH
203
3
HOH
HOH
503
A
HOH
204
3
HOH
HOH
504
A
HOH
205
3
HOH
HOH
505
A
HOH
206
3
HOH
HOH
506
A
HOH
207
3
HOH
HOH
507
A
HOH
208
3
HOH
HOH
508
A
HOH
209
3
HOH
HOH
509
A
HOH
210
3
HOH
HOH
510
A
HOH
211
3
HOH
HOH
511
A
HOH
212
3
HOH
HOH
512
A
HOH
213
3
HOH
HOH
513
A
HOH
214
3
HOH
HOH
514
A
HOH
215
3
HOH
HOH
515
A
HOH
216
3
HOH
HOH
516
A
HOH
217
3
HOH
HOH
517
A
HOH
218
3
HOH
HOH
518
A
HOH
219
3
HOH
HOH
519
A
HOH
220
3
HOH
HOH
520
A
HOH
221
3
HOH
HOH
521
A
HOH
222
3
HOH
HOH
522
A
HOH
223
3
HOH
HOH
523
A
HOH
224
3
HOH
HOH
524
A
HOH
225
3
HOH
HOH
525
A
HOH
226
3
HOH
HOH
526
A
HOH
227
3
HOH
HOH
527
A
HOH
228
3
HOH
HOH
528
A
HOH
229
3
HOH
HOH
529
A
HOH
230
3
HOH
HOH
530
A
HOH
231
3
HOH
HOH
531
A
HOH
232
3
HOH
HOH
532
A
HOH
233
3
HOH
HOH
533
A
HOH
234
3
HOH
HOH
534
A
HOH
235
3
HOH
HOH
535
A
HOH
236
3
HOH
HOH
536
A
HOH
237
3
HOH
HOH
537
A
HOH
238
3
HOH
HOH
538
A
HOH
239
3
HOH
HOH
539
A
HOH
240
3
HOH
HOH
540
A
HOH
241
3
HOH
HOH
541
A
HOH
242
3
HOH
HOH
542
A
HOH
243
3
HOH
HOH
543
A
HOH
244
3
HOH
HOH
544
A
HOH
245
3
HOH
HOH
545
A
HOH
246
3
HOH
HOH
546
A
HOH
247
3
HOH
HOH
547
A
HOH
248
3
HOH
HOH
548
A
HOH
249
3
HOH
HOH
549
A
HOH
250
3
HOH
HOH
550
A
HOH
251
3
HOH
HOH
551
A
HOH
252
3
HOH
HOH
552
A
HOH
253
3
HOH
HOH
553
A
HOH
254
3
HOH
HOH
554
A
HOH
255
3
HOH
HOH
555
A
HOH
256
3
HOH
HOH
556
A
HOH
257
3
HOH
HOH
557
A
HOH
258
3
HOH
HOH
558
A
HOH
259
3
HOH
HOH
559
A
HOH
260
3
HOH
HOH
560
A
HOH
261
3
HOH
HOH
561
A
HOH
262
3
HOH
HOH
562
A
HOH
263
3
HOH
HOH
563
A
HOH
264
3
HOH
HOH
564
A
HOH
265
3
HOH
HOH
565
A
HOH
266
3
HOH
HOH
566
A
HOH
267
3
HOH
HOH
567
A
HOH
268
3
HOH
HOH
568
A
HOH
269
3
HOH
HOH
569
A
HOH
270
3
HOH
HOH
570
A
HOH
271
3
HOH
HOH
571
A
HOH
272
3
HOH
HOH
572
A
HOH
273
3
HOH
HOH
573
A
HOH
274
3
HOH
HOH
574
A
HOH
275
3
HOH
HOH
575
A
HOH
276
3
HOH
HOH
576
A
HOH
277
3
HOH
HOH
577
A
HOH
278
3
HOH
HOH
578
A
HOH
279
3
HOH
HOH
579
A
HOH
280
3
HOH
HOH
580
A
HOH
281
3
HOH
HOH
581
A
HOH
282
3
HOH
HOH
582
A
HOH
283
3
HOH
HOH
583
A
HOH
284
3
HOH
HOH
584
A
HOH
285
3
HOH
HOH
585
A
HOH
286
3
HOH
HOH
586
A
HOH
287
3
HOH
HOH
587
A
HOH
288
3
HOH
HOH
588
A
HOH
289
3
HOH
HOH
589
A
HOH
290
3
HOH
HOH
590
A
HOH
291
3
HOH
HOH
591
A
HOH
292
3
HOH
HOH
592
A
SER
1
n
1
SER
1
A
VAL
2
n
2
VAL
2
A
ARG
3
n
3
ARG
3
A
LYS
4
n
4
LYS
4
A
PHE
5
n
5
PHE
5
A
THR
6
n
6
THR
6
A
GLU
7
n
7
GLU
7
A
LYS
8
n
8
LYS
8
A
HIS
9
n
9
HIS
9
A
GLU
10
n
10
GLU
10
A
TRP
11
n
11
TRP
11
A
VAL
12
n
12
VAL
12
A
THR
13
n
13
THR
13
A
THR
14
n
14
THR
14
A
GLU
15
n
15
GLU
15
A
ASN
16
n
16
ASN
16
A
GLY
17
n
17
GLY
17
A
VAL
18
n
18
VAL
18
A
GLY
19
n
19
GLY
19
A
THR
20
n
20
THR
20
A
VAL
21
n
21
VAL
21
A
GLY
22
n
22
GLY
22
A
ILE
23
n
23
ILE
23
A
SER
24
n
24
SER
24
A
ASN
25
n
25
ASN
25
A
PHE
26
n
26
PHE
26
A
ALA
27
n
27
ALA
27
A
GLN
28
n
28
GLN
28
A
GLU
29
n
29
GLU
29
A
ALA
30
n
30
ALA
30
A
LEU
31
n
31
LEU
31
A
GLY
32
n
32
GLY
32
A
ASP
33
n
33
ASP
33
A
VAL
34
n
34
VAL
34
A
VAL
35
n
35
VAL
35
A
TYR
36
n
36
TYR
36
A
CYS
37
n
37
CYS
37
A
SER
38
n
38
SER
38
A
LEU
39
n
39
LEU
39
A
PRO
40
n
40
PRO
40
A
GLU
41
n
41
GLU
41
A
VAL
42
n
42
VAL
42
A
GLY
43
n
43
GLY
43
A
THR
44
n
44
THR
44
A
LYS
45
n
45
LYS
45
A
LEU
46
n
46
LEU
46
A
ASN
47
n
47
ASN
47
A
LYS
48
n
48
LYS
48
A
GLN
49
n
49
GLN
49
A
GLU
50
n
50
GLU
50
A
GLU
51
n
51
GLU
51
A
PHE
52
n
52
PHE
52
A
GLY
53
n
53
GLY
53
A
ALA
54
n
54
ALA
54
A
LEU
55
n
55
LEU
55
A
GLU
56
n
56
GLU
56
A
SER
57
n
57
SER
57
A
VAL
58
n
58
VAL
58
A
LYS
59
n
59
LYS
59
A
ALA
60
n
60
ALA
60
A
ALA
61
n
61
ALA
61
A
SER
62
n
62
SER
62
A
GLU
63
n
63
GLU
63
A
LEU
64
n
64
LEU
64
A
TYR
65
n
65
TYR
65
A
SER
66
n
66
SER
66
A
PRO
67
n
67
PRO
67
A
LEU
68
n
68
LEU
68
A
SER
69
n
69
SER
69
A
GLY
70
n
70
GLY
70
A
GLU
71
n
71
GLU
71
A
VAL
72
n
72
VAL
72
A
THR
73
n
73
THR
73
A
GLU
74
n
74
GLU
74
A
ILE
75
n
75
ILE
75
A
ASN
76
n
76
ASN
76
A
LYS
77
n
77
LYS
77
A
ALA
78
n
78
ALA
78
A
LEU
79
n
79
LEU
79
A
ALA
80
n
80
ALA
80
A
GLU
81
n
81
GLU
81
A
ASN
82
n
82
ASN
82
A
PRO
83
n
83
PRO
83
A
GLY
84
n
84
GLY
84
A
LEU
85
n
85
LEU
85
A
VAL
86
n
86
VAL
86
A
ASN
87
n
87
ASN
87
A
LYS
88
n
88
LYS
88
A
SER
89
n
89
SER
89
A
CYS
90
n
90
CYS
90
A
TYR
91
n
91
TYR
91
A
GLU
92
n
92
GLU
92
A
ASP
93
n
93
ASP
93
A
GLY
94
n
94
GLY
94
A
TRP
95
n
95
TRP
95
A
LEU
96
n
96
LEU
96
A
ILE
97
n
97
ILE
97
A
LYS
98
n
98
LYS
98
A
MET
99
n
99
MET
99
A
THR
100
n
100
THR
100
A
PHE
101
n
101
PHE
101
A
SER
102
n
102
SER
102
A
ASN
103
n
103
ASN
103
A
PRO
104
n
104
PRO
104
A
SER
105
n
105
SER
105
A
GLU
106
n
106
GLU
106
A
LEU
107
n
107
LEU
107
A
ASP
108
n
108
ASP
108
A
GLU
109
n
109
GLU
109
A
LEU
110
n
110
LEU
110
A
MET
111
n
111
MET
111
A
SER
112
n
112
SER
112
A
GLU
113
n
113
GLU
113
A
GLU
114
n
114
GLU
114
A
ALA
115
n
115
ALA
115
A
TYR
116
n
116
TYR
116
A
GLU
117
n
117
GLU
117
A
LYS
118
n
118
LYS
118
A
TYR
119
n
119
TYR
119
A
ILE
120
n
120
ILE
120
A
LYS
121
n
121
LYS
121
A
SER
122
n
122
SER
122
A
ILE
123
n
123
ILE
123
A
GLU
124
n
124
GLU
124
A
GLU
125
n
125
GLU
125
A
0.114
0.139
author_and_software_defined_assembly
PISA
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
LEU
46
A
N
LEU
46
A
O
GLY
70
A
O
GLY
70
A
N
THR
73
A
N
THR
73
A
O
LYS
98
A
O
LYS
98
A
O
MET
99
A
O
MET
99
A
N
GLY
19
A
N
GLY
19
A
O
THR
20
A
O
THR
20
A
N
THR
13
A
N
THR
13
A
O
VAL
12
A
O
VAL
12
A
N
LYS
4
A
N
LYS
4
A
N
PHE
5
A
N
PHE
5
A
O
MET
111
A
O
MET
111
A
N
SER
38
A
N
SER
38
A
O
ALA
54
A
O
ALA
54
A
N
GLY
53
A
N
GLY
53
A
O
LEU
64
A
O
LEU
64
1
A
A
NZ
O
LYS
HOH
4
554
0.98
B
1
A
A
OE2
O
GLU
HOH
63
544
1.09
B
1
A
A
CE
O
LYS
HOH
59
573
1.54
B
1
A
A
NZ
O
LYS
HOH
59
573
1.57
A
1
A
A
NZ
O
LYS
HOH
59
573
1.60
B
1
A
A
NZ
O
LYS
HOH
59
555
1.65
B
1
A
A
ND2
O
ASN
HOH
82
532
1.80
B
1
A
A
CE
O
LYS
HOH
59
573
1.87
A
1
A
A
OD1
O
ASN
HOH
82
484
1.88
B
1
A
A
OD1
O
ASP
HOH
33
323
1.93
B
1
A
A
OD1
O
ASP
HOH
33
365
2.04
B
1
A
A
CD
O
GLU
HOH
63
544
2.10
B
1
11.83
1.40
123.60
135.43
A
A
A
CD
NE
CZ
ARG
ARG
ARG
3
3
3
A
A
A
N
1
10.70
1.40
123.60
134.30
A
A
A
CD
NE
CZ
ARG
ARG
ARG
3
3
3
B
B
B
N
1
-4.13
0.50
120.30
116.17
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
3
3
3
B
B
B
N
1
-7.95
1.20
123.30
115.35
A
A
A
OE1
CD
OE2
GLU
GLU
GLU
15
15
15
N
1
-9.86
1.60
122.70
112.84
A
A
A
O
C
N
LEU
LEU
ASP
107
107
108
B
B
Y
1
-14.85
2.20
117.20
102.35
A
A
A
CA
C
N
ASP
ASP
GLU
108
108
109
B
Y
1
14.08
1.60
122.70
136.78
A
A
A
O
C
N
ASP
ASP
GLU
108
108
109
B
Y
1
-12.23
1.20
123.30
111.07
A
A
A
OE1
CD
OE2
GLU
GLU
GLU
109
109
109
B
B
B
N
1
A
HIS
9
73.56
30.07
1
A
ASN
16
38.67
52.10
1
A
GLN
49
86.65
-10.62
1
A
GLN
49
79.29
-0.30
1
A
SER
89
-150.44
58.37
1
A
GLU
92
-129.62
-91.75
1
A
GLU
92
-129.21
-91.70
10.8
0.139
0.114
0.86
30.7
126382
126382
RANDOM
1
MOLECULAR REPLACEMENT
3KLR
Engh & Huber
0.86
30.7
292
1277
12
0
973
0.017
2.206
0.86
30.7
3WDN
126382
2.85
0.059
1
44.7
5.9
99.8
0.496
0.86
0.87
2.85
3126
1
3.6
99.3
refinement
SHELXL-97
data reduction
DENZO
data scaling
SCALEPACK
High-resolution X-ray crystal structure of bovine H-protein using a high-pressure cryocooling method
1
N
N
2
N
N
2
N
N
3
N
N
A
SER
24
A
SER
24
HELX_P
A
GLY
32
A
GLY
32
1
1
9
A
LYS
77
A
LYS
77
HELX_P
A
ALA
80
A
ALA
80
5
2
4
A
GLY
84
A
GLY
84
HELX_P
A
SER
89
A
SER
89
1
3
6
A
ASN
103
A
ASN
103
HELX_P
A
LEU
110
A
LEU
110
5
4
8
A
GLU
113
A
GLU
113
HELX_P
A
GLU
125
A
GLU
125
1
5
13
OXIDOREDUCTASE
antiparallel beta sheet, beta sandwich, OXIDOREDUCTASE
GCSH_BOVIN
UNP
1
49
P20821
SVRKFTEKHEWVTTENGVGTVGISNFAQEALGDVVYCSLPEVGTKLNKQEEFGALESVKAASELYSPLSGEVTEINKALA
ENPGLVNKSCYEDGWLIKMTFSNPSELDELMSEEAYEKYIKSIEE
49
173
3WDN
1
125
P20821
A
1
1
125
7
3
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
LYS
45
A
LYS
45
A
LEU
46
A
LEU
46
A
GLY
70
A
GLY
70
A
ILE
75
A
ILE
75
A
ILE
97
A
ILE
97
A
PHE
101
A
PHE
101
A
VAL
18
A
VAL
18
A
ILE
23
A
ILE
23
A
GLU
10
A
GLU
10
A
GLU
15
A
GLU
15
A
LYS
4
A
LYS
4
A
PHE
5
A
PHE
5
A
MET
111
A
MET
111
A
SER
112
A
SER
112
A
VAL
34
A
VAL
34
A
SER
38
A
SER
38
A
GLU
51
A
GLU
51
A
SER
57
A
SER
57
A
ALA
61
A
ALA
61
A
TYR
65
A
TYR
65
BINDING SITE FOR RESIDUE GOL A 201
A
GOL
201
Software
12
BINDING SITE FOR RESIDUE GOL A 202
A
GOL
202
Software
7
A
ASN
25
A
ASN
25
12
1_555
A
LYS
59
A
LYS
59
12
4_556
A
ALA
60
A
ALA
60
12
4_556
A
ASN
87
A
ASN
87
12
1_555
A
LYS
88
A
LYS
88
12
1_555
A
SER
89
A
SER
89
12
1_555
A
CYS
90
A
CYS
90
12
1_555
A
HOH
316
D
HOH
12
1_555
A
HOH
328
D
HOH
12
1_555
A
HOH
432
D
HOH
12
4_556
A
HOH
466
D
HOH
12
1_555
A
HOH
467
D
HOH
12
1_555
A
ARG
3
A
ARG
3
7
1_555
A
LYS
59
A
LYS
59
7
4_556
A
GLU
113
A
GLU
113
7
1_555
A
HOH
413
D
HOH
7
1_555
A
HOH
424
D
HOH
7
1_555
A
HOH
505
D
HOH
7
4_556
A
HOH
575
D
HOH
7
1_555
5
C 1 2 1