0.014447 0.000000 0.000000 0.000000 0.014447 0.000000 0.000000 0.000000 0.006984 0.00000 0.00000 0.00000 Niwa, H. Shirouzu, M. Yokoyama, S. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 69.217 69.217 143.181 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C17 H17 N7 319.364 4-[4-(1H-benzimidazol-2-yl)piperidin-1-yl]-1H-pyrazolo[3,4-d]pyrimidine non-polymer C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C4 H10 N O6 P 199.099 n PHOSPHOTHREONINE PHOSPHONOTHREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking Zn 2 65.409 ZINC ION non-polymer NE J.Struct.Funct.Genom. 1345-711X 15 153 164 10.1007/s10969-014-9188-8 25078151 Crystal structures of the S6K1 kinase domain in complexes with inhibitors 2014 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD 2011-04-25 RAYONIX MX225HE Si double crystal monochromator SINGLE WAVELENGTH M x-ray 1 1.000 1.0 BL41XU SPring-8 1.000 SYNCHROTRON SPRING-8 BEAMLINE BL41XU 37178.816 Ribosomal protein S6 kinase beta-1 2.7.11.1 UNP residues 78-399 1 man polymer 65.409 ZINC ION 1 syn non-polymer 319.364 4-[4-(1H-benzimidazol-2-yl)piperidin-1-yl]-1H-pyrazolo[3,4-d]pyrimidine 1 syn non-polymer 18.015 water 110 nat water S6K-beta-1, S6K1, 70 kDa ribosomal protein S6 kinase 1, Ribosomal protein S6 kinase I, Serine/threonine-protein kinase 14A, p70 ribosomal S6 kinase alpha no yes GSFTSSGSVNRGPEKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQG HVKLTDFGLCKESIHDGTVTH(TPO)FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKIL KCKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFKPLLQSEEDVSQFDSKF TRQTPVDSPDDST GSFTSSGSVNRGPEKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQG HVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKL NLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFKPLLQSEEDVSQFDSKFTRQT PVDSPDDST A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human fall armyworm sample RPS6KB1 9606 Homo sapiens 7108 Spodoptera frugiperda Baculovirus 1 2.31 46.67 VAPOR DIFFUSION, SITTING DROP 8.5 0.1M Tris-HCl, 2.9-3.3M sodium formate, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K 293 repository Initial release Database references Database references 1 0 2014-08-06 1 1 2014-08-13 1 2 2014-10-29 PDBJ Y PDBJ 2013-07-17 REL REL ZN ZINC ION FZ8 4-[4-(1H-benzimidazol-2-yl)piperidin-1-yl]-1H-pyrazolo[3,4-d]pyrimidine HOH water ZN 401 2 ZN ZN 401 A FZ8 501 3 FZ8 FZ8 402 A HOH 1 4 HOH HOH 501 A HOH 2 4 HOH HOH 502 A HOH 3 4 HOH HOH 503 A HOH 4 4 HOH HOH 504 A HOH 5 4 HOH HOH 505 A HOH 6 4 HOH HOH 506 A HOH 7 4 HOH HOH 507 A HOH 8 4 HOH HOH 508 A HOH 9 4 HOH HOH 509 A HOH 10 4 HOH HOH 510 A HOH 11 4 HOH HOH 511 A HOH 12 4 HOH HOH 512 A HOH 13 4 HOH HOH 513 A HOH 14 4 HOH HOH 514 A HOH 15 4 HOH HOH 515 A HOH 16 4 HOH HOH 516 A HOH 17 4 HOH HOH 517 A HOH 18 4 HOH HOH 518 A HOH 19 4 HOH HOH 519 A HOH 20 4 HOH HOH 520 A HOH 21 4 HOH HOH 521 A HOH 22 4 HOH HOH 522 A HOH 23 4 HOH HOH 523 A HOH 24 4 HOH HOH 524 A HOH 25 4 HOH HOH 525 A HOH 26 4 HOH HOH 526 A HOH 27 4 HOH HOH 527 A HOH 28 4 HOH HOH 528 A HOH 29 4 HOH HOH 529 A HOH 30 4 HOH HOH 530 A HOH 31 4 HOH HOH 531 A HOH 32 4 HOH HOH 532 A HOH 33 4 HOH HOH 533 A HOH 34 4 HOH HOH 534 A HOH 35 4 HOH HOH 535 A HOH 36 4 HOH HOH 536 A HOH 37 4 HOH HOH 537 A HOH 38 4 HOH HOH 538 A HOH 39 4 HOH HOH 539 A HOH 40 4 HOH HOH 540 A HOH 41 4 HOH HOH 541 A HOH 42 4 HOH HOH 542 A HOH 43 4 HOH HOH 543 A HOH 44 4 HOH HOH 544 A HOH 45 4 HOH HOH 545 A HOH 46 4 HOH HOH 546 A HOH 47 4 HOH HOH 547 A HOH 48 4 HOH HOH 548 A HOH 49 4 HOH HOH 549 A HOH 50 4 HOH HOH 550 A HOH 51 4 HOH HOH 551 A HOH 52 4 HOH HOH 552 A HOH 53 4 HOH HOH 553 A HOH 54 4 HOH HOH 554 A HOH 55 4 HOH HOH 555 A HOH 56 4 HOH HOH 556 A HOH 57 4 HOH HOH 557 A HOH 58 4 HOH HOH 558 A HOH 59 4 HOH HOH 559 A HOH 60 4 HOH HOH 560 A HOH 61 4 HOH HOH 561 A HOH 62 4 HOH HOH 562 A HOH 63 4 HOH HOH 563 A HOH 64 4 HOH HOH 564 A HOH 65 4 HOH HOH 565 A HOH 66 4 HOH HOH 566 A HOH 67 4 HOH HOH 567 A HOH 68 4 HOH HOH 568 A HOH 69 4 HOH HOH 569 A HOH 70 4 HOH HOH 570 A HOH 71 4 HOH HOH 571 A HOH 72 4 HOH HOH 572 A HOH 73 4 HOH HOH 573 A HOH 74 4 HOH HOH 574 A HOH 75 4 HOH HOH 575 A HOH 76 4 HOH HOH 576 A HOH 77 4 HOH HOH 577 A HOH 78 4 HOH HOH 578 A HOH 79 4 HOH HOH 579 A HOH 80 4 HOH HOH 580 A HOH 81 4 HOH HOH 581 A HOH 82 4 HOH HOH 582 A HOH 83 4 HOH HOH 583 A HOH 84 4 HOH HOH 584 A HOH 85 4 HOH HOH 585 A HOH 86 4 HOH HOH 586 A HOH 87 4 HOH HOH 587 A HOH 88 4 HOH HOH 588 A HOH 89 4 HOH HOH 589 A HOH 90 4 HOH HOH 590 A HOH 91 4 HOH HOH 591 A HOH 92 4 HOH HOH 592 A HOH 93 4 HOH HOH 593 A HOH 94 4 HOH HOH 594 A HOH 95 4 HOH HOH 595 A HOH 96 4 HOH HOH 596 A HOH 97 4 HOH HOH 597 A HOH 98 4 HOH HOH 598 A HOH 99 4 HOH HOH 599 A HOH 100 4 HOH HOH 600 A HOH 101 4 HOH HOH 601 A HOH 102 4 HOH HOH 602 A HOH 103 4 HOH HOH 603 A HOH 104 4 HOH HOH 604 A HOH 105 4 HOH HOH 605 A HOH 106 4 HOH HOH 606 A HOH 107 4 HOH HOH 607 A HOH 108 4 HOH HOH 608 A HOH 109 4 HOH HOH 609 A HOH 110 4 HOH HOH 610 A n 1 71 A n 2 72 A n 3 73 A n 4 74 A n 5 75 A n 6 76 A n 7 77 A n 8 78 A n 9 79 A n 10 80 A n 11 81 A n 12 82 A n 13 83 A n 14 84 A LYS 85 n 15 LYS 85 A ILE 86 n 16 ILE 86 A ARG 87 n 17 ARG 87 A PRO 88 n 18 PRO 88 A GLU 89 n 19 GLU 89 A CYS 90 n 20 CYS 90 A PHE 91 n 21 PHE 91 A GLU 92 n 22 GLU 92 A LEU 93 n 23 LEU 93 A LEU 94 n 24 LEU 94 A ARG 95 n 25 ARG 95 A VAL 96 n 26 VAL 96 A LEU 97 n 27 LEU 97 A GLY 98 n 28 GLY 98 A LYS 99 n 29 LYS 99 A GLY 100 n 30 GLY 100 A GLY 101 n 31 GLY 101 A TYR 102 n 32 TYR 102 A GLY 103 n 33 GLY 103 A LYS 104 n 34 LYS 104 A VAL 105 n 35 VAL 105 A PHE 106 n 36 PHE 106 A GLN 107 n 37 GLN 107 A VAL 108 n 38 VAL 108 A ARG 109 n 39 ARG 109 A LYS 110 n 40 LYS 110 A VAL 111 n 41 VAL 111 A THR 112 n 42 THR 112 A GLY 113 n 43 GLY 113 A ALA 114 n 44 ALA 114 A ASN 115 n 45 ASN 115 A THR 116 n 46 THR 116 A GLY 117 n 47 GLY 117 A LYS 118 n 48 LYS 118 A ILE 119 n 49 ILE 119 A PHE 120 n 50 PHE 120 A ALA 121 n 51 ALA 121 A MET 122 n 52 MET 122 A LYS 123 n 53 LYS 123 A VAL 124 n 54 VAL 124 A LEU 125 n 55 LEU 125 A LYS 126 n 56 LYS 126 A LYS 127 n 57 LYS 127 A n 58 128 A n 59 129 A n 60 130 A n 61 131 A n 62 132 A n 63 133 A n 64 134 A n 65 135 A n 66 136 A n 67 137 A n 68 138 A n 69 139 A THR 140 n 70 THR 140 A LYS 141 n 71 LYS 141 A ALA 142 n 72 ALA 142 A GLU 143 n 73 GLU 143 A ARG 144 n 74 ARG 144 A ASN 145 n 75 ASN 145 A ILE 146 n 76 ILE 146 A LEU 147 n 77 LEU 147 A GLU 148 n 78 GLU 148 A GLU 149 n 79 GLU 149 A VAL 150 n 80 VAL 150 A LYS 151 n 81 LYS 151 A HIS 152 n 82 HIS 152 A PRO 153 n 83 PRO 153 A PHE 154 n 84 PHE 154 A ILE 155 n 85 ILE 155 A VAL 156 n 86 VAL 156 A ASP 157 n 87 ASP 157 A LEU 158 n 88 LEU 158 A ILE 159 n 89 ILE 159 A TYR 160 n 90 TYR 160 A ALA 161 n 91 ALA 161 A PHE 162 n 92 PHE 162 A GLN 163 n 93 GLN 163 A THR 164 n 94 THR 164 A GLY 165 n 95 GLY 165 A GLY 166 n 96 GLY 166 A LYS 167 n 97 LYS 167 A LEU 168 n 98 LEU 168 A TYR 169 n 99 TYR 169 A LEU 170 n 100 LEU 170 A ILE 171 n 101 ILE 171 A LEU 172 n 102 LEU 172 A GLU 173 n 103 GLU 173 A TYR 174 n 104 TYR 174 A LEU 175 n 105 LEU 175 A SER 176 n 106 SER 176 A GLY 177 n 107 GLY 177 A GLY 178 n 108 GLY 178 A GLU 179 n 109 GLU 179 A LEU 180 n 110 LEU 180 A PHE 181 n 111 PHE 181 A MET 182 n 112 MET 182 A GLN 183 n 113 GLN 183 A LEU 184 n 114 LEU 184 A GLU 185 n 115 GLU 185 A ARG 186 n 116 ARG 186 A GLU 187 n 117 GLU 187 A GLY 188 n 118 GLY 188 A ILE 189 n 119 ILE 189 A PHE 190 n 120 PHE 190 A MET 191 n 121 MET 191 A GLU 192 n 122 GLU 192 A ASP 193 n 123 ASP 193 A THR 194 n 124 THR 194 A ALA 195 n 125 ALA 195 A CYS 196 n 126 CYS 196 A PHE 197 n 127 PHE 197 A TYR 198 n 128 TYR 198 A LEU 199 n 129 LEU 199 A ALA 200 n 130 ALA 200 A GLU 201 n 131 GLU 201 A ILE 202 n 132 ILE 202 A SER 203 n 133 SER 203 A MET 204 n 134 MET 204 A ALA 205 n 135 ALA 205 A LEU 206 n 136 LEU 206 A GLY 207 n 137 GLY 207 A HIS 208 n 138 HIS 208 A LEU 209 n 139 LEU 209 A HIS 210 n 140 HIS 210 A GLN 211 n 141 GLN 211 A LYS 212 n 142 LYS 212 A GLY 213 n 143 GLY 213 A ILE 214 n 144 ILE 214 A ILE 215 n 145 ILE 215 A TYR 216 n 146 TYR 216 A ARG 217 n 147 ARG 217 A ASP 218 n 148 ASP 218 A LEU 219 n 149 LEU 219 A LYS 220 n 150 LYS 220 A PRO 221 n 151 PRO 221 A GLU 222 n 152 GLU 222 A ASN 223 n 153 ASN 223 A ILE 224 n 154 ILE 224 A MET 225 n 155 MET 225 A LEU 226 n 156 LEU 226 A ASN 227 n 157 ASN 227 A HIS 228 n 158 HIS 228 A GLN 229 n 159 GLN 229 A GLY 230 n 160 GLY 230 A HIS 231 n 161 HIS 231 A VAL 232 n 162 VAL 232 A LYS 233 n 163 LYS 233 A LEU 234 n 164 LEU 234 A THR 235 n 165 THR 235 A ASP 236 n 166 ASP 236 A PHE 237 n 167 PHE 237 A GLY 238 n 168 GLY 238 A LEU 239 n 169 LEU 239 A CYS 240 n 170 CYS 240 A LYS 241 n 171 LYS 241 A GLU 242 n 172 GLU 242 A SER 243 n 173 SER 243 A ILE 244 n 174 ILE 244 A HIS 245 n 175 HIS 245 A ASP 246 n 176 ASP 246 A GLY 247 n 177 GLY 247 A THR 248 n 178 THR 248 A VAL 249 n 179 VAL 249 A THR 250 n 180 THR 250 A HIS 251 n 181 HIS 251 A TPO 252 n 182 TPO 252 A PHE 253 n 183 PHE 253 A CYS 254 n 184 CYS 254 A GLY 255 n 185 GLY 255 A THR 256 n 186 THR 256 A ILE 257 n 187 ILE 257 A GLU 258 n 188 GLU 258 A TYR 259 n 189 TYR 259 A MET 260 n 190 MET 260 A ALA 261 n 191 ALA 261 A PRO 262 n 192 PRO 262 A GLU 263 n 193 GLU 263 A ILE 264 n 194 ILE 264 A LEU 265 n 195 LEU 265 A MET 266 n 196 MET 266 A ARG 267 n 197 ARG 267 A SER 268 n 198 SER 268 A GLY 269 n 199 GLY 269 A HIS 270 n 200 HIS 270 A ASN 271 n 201 ASN 271 A ARG 272 n 202 ARG 272 A ALA 273 n 203 ALA 273 A VAL 274 n 204 VAL 274 A ASP 275 n 205 ASP 275 A TRP 276 n 206 TRP 276 A TRP 277 n 207 TRP 277 A SER 278 n 208 SER 278 A LEU 279 n 209 LEU 279 A GLY 280 n 210 GLY 280 A ALA 281 n 211 ALA 281 A LEU 282 n 212 LEU 282 A MET 283 n 213 MET 283 A TYR 284 n 214 TYR 284 A ASP 285 n 215 ASP 285 A MET 286 n 216 MET 286 A LEU 287 n 217 LEU 287 A THR 288 n 218 THR 288 A GLY 289 n 219 GLY 289 A ALA 290 n 220 ALA 290 A PRO 291 n 221 PRO 291 A PRO 292 n 222 PRO 292 A PHE 293 n 223 PHE 293 A THR 294 n 224 THR 294 A GLY 295 n 225 GLY 295 A GLU 296 n 226 GLU 296 A ASN 297 n 227 ASN 297 A ARG 298 n 228 ARG 298 A LYS 299 n 229 LYS 299 A LYS 300 n 230 LYS 300 A THR 301 n 231 THR 301 A ILE 302 n 232 ILE 302 A ASP 303 n 233 ASP 303 A LYS 304 n 234 LYS 304 A ILE 305 n 235 ILE 305 A LEU 306 n 236 LEU 306 A LYS 307 n 237 LYS 307 A CYS 308 n 238 CYS 308 A LYS 309 n 239 LYS 309 A LEU 310 n 240 LEU 310 A ASN 311 n 241 ASN 311 A LEU 312 n 242 LEU 312 A PRO 313 n 243 PRO 313 A PRO 314 n 244 PRO 314 A TYR 315 n 245 TYR 315 A LEU 316 n 246 LEU 316 A THR 317 n 247 THR 317 A GLN 318 n 248 GLN 318 A GLU 319 n 249 GLU 319 A ALA 320 n 250 ALA 320 A ARG 321 n 251 ARG 321 A ASP 322 n 252 ASP 322 A LEU 323 n 253 LEU 323 A LEU 324 n 254 LEU 324 A LYS 325 n 255 LYS 325 A LYS 326 n 256 LYS 326 A LEU 327 n 257 LEU 327 A LEU 328 n 258 LEU 328 A LYS 329 n 259 LYS 329 A ARG 330 n 260 ARG 330 A ASN 331 n 261 ASN 331 A ALA 332 n 262 ALA 332 A ALA 333 n 263 ALA 333 A SER 334 n 264 SER 334 A ARG 335 n 265 ARG 335 A LEU 336 n 266 LEU 336 A GLY 337 n 267 GLY 337 A ALA 338 n 268 ALA 338 A GLY 339 n 269 GLY 339 A PRO 340 n 270 PRO 340 A GLY 341 n 271 GLY 341 A ASP 342 n 272 ASP 342 A ALA 343 n 273 ALA 343 A GLY 344 n 274 GLY 344 A GLU 345 n 275 GLU 345 A VAL 346 n 276 VAL 346 A GLN 347 n 277 GLN 347 A ALA 348 n 278 ALA 348 A HIS 349 n 279 HIS 349 A PRO 350 n 280 PRO 350 A PHE 351 n 281 PHE 351 A PHE 352 n 282 PHE 352 A ARG 353 n 283 ARG 353 A HIS 354 n 284 HIS 354 A ILE 355 n 285 ILE 355 A ASN 356 n 286 ASN 356 A TRP 357 n 287 TRP 357 A GLU 358 n 288 GLU 358 A GLU 359 n 289 GLU 359 A LEU 360 n 290 LEU 360 A LEU 361 n 291 LEU 361 A ALA 362 n 292 ALA 362 A ARG 363 n 293 ARG 363 A LYS 364 n 294 LYS 364 A VAL 365 n 295 VAL 365 A GLU 366 n 296 GLU 366 A PRO 367 n 297 PRO 367 A PRO 368 n 298 PRO 368 A PHE 369 n 299 PHE 369 A LYS 370 n 300 LYS 370 A PRO 371 n 301 PRO 371 A LEU 372 n 302 LEU 372 A LEU 373 n 303 LEU 373 A GLN 374 n 304 GLN 374 A n 305 375 A n 306 376 A n 307 377 A n 308 378 A n 309 379 A n 310 380 A n 311 381 A n 312 382 A n 313 383 A n 314 384 A n 315 385 A n 316 386 A n 317 387 A n 318 388 A n 319 389 A n 320 390 A n 321 391 A n 322 392 A n 323 393 A n 324 394 A n 325 395 A n 326 396 A n 327 397 A n 328 398 A n 329 399 A 3.6715 0.1775 1.3977 7.9497 0.7626 8.0185 0.0695 -0.5321 0.1810 0.3785 0.1500 -0.4815 0.2802 0.7662 -0.1857 0.2201 0.0059 0.0279 0.4478 -0.0986 0.2724 refined -3.0487 5.4276 -16.4602 X-RAY DIFFRACTION 5.1181 -2.2059 -2.6803 3.4004 1.4496 3.4171 -0.2982 -0.2661 -0.4946 0.1761 0.0640 0.1486 0.3262 0.3049 0.2288 0.2811 -0.0137 0.0387 0.3097 -0.0079 0.2604 refined -18.3748 7.4868 -7.3579 X-RAY DIFFRACTION 3.4989 -2.1320 -1.8574 3.1850 1.9965 5.1331 -0.0978 -0.1353 -0.2175 0.1419 0.0478 0.1349 -0.0172 0.0281 0.0317 0.2317 -0.0282 0.0646 0.3207 0.0198 0.2606 refined -28.0798 16.7783 -0.6877 X-RAY DIFFRACTION X-RAY DIFFRACTION 1 CHAIN A AND (RESSEQ 85:126 ) X-RAY DIFFRACTION 2 CHAIN A AND (RESSEQ 127:234 ) X-RAY DIFFRACTION 3 CHAIN A AND (RESSEQ 235:374 ) author_and_software_defined_assembly PISA 1 monomeric A HIS 251 A ND1 HIS 181 1_555 A ZN 401 B ZN ZN 1_555 A CYS 254 A SG CYS 184 1_555 105.5 A HIS 251 A ND1 HIS 181 1_555 A ZN 401 B ZN ZN 1_555 A HIS 245 A ND1 HIS 175 1_555 132.2 A CYS 254 A SG CYS 184 1_555 A ZN 401 B ZN ZN 1_555 A HIS 245 A ND1 HIS 175 1_555 110.0 A HIS 251 A ND1 HIS 181 1_555 A ZN 401 B ZN ZN 1_555 A CYS 240 A SG CYS 170 1_555 92.1 A CYS 254 A SG CYS 184 1_555 A ZN 401 B ZN ZN 1_555 A CYS 240 A SG CYS 170 1_555 113.2 A HIS 245 A ND1 HIS 175 1_555 A ZN 401 B ZN ZN 1_555 A CYS 240 A SG CYS 170 1_555 102.0 A TPO 252 PHOSPHOTHREONINE A TPO 182 THR 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N LEU 97 A N LEU 27 A O VAL 105 A O VAL 35 A N LYS 104 A N LYS 34 A O VAL 124 A O VAL 54 A N ALA 121 A N ALA 51 A O LEU 172 A O LEU 102 A O TYR 169 A O TYR 99 A N PHE 162 A N PHE 92 A N MET 225 A N MET 155 A O LYS 233 A O LYS 163 1 A CG LYS 85 A CG LYS 15 1 Y 1 A CD LYS 85 A CD LYS 15 1 Y 1 A CE LYS 85 A CE LYS 15 1 Y 1 A NZ LYS 85 A NZ LYS 15 1 Y 1 A CG LYS 127 A CG LYS 57 1 Y 1 A CD LYS 127 A CD LYS 57 1 Y 1 A CE LYS 127 A CE LYS 57 1 Y 1 A NZ LYS 127 A NZ LYS 57 1 Y 1 A CB THR 248 A CB THR 178 1 Y 1 A OG1 THR 248 A OG1 THR 178 1 Y 1 A CG2 THR 248 A CG2 THR 178 1 Y 1 A CB VAL 249 A CB VAL 179 1 Y 1 A CG1 VAL 249 A CG1 VAL 179 1 Y 1 A CG2 VAL 249 A CG2 VAL 179 1 Y 1 A GLY 71 A GLY 1 1 Y 1 A SER 72 A SER 2 1 Y 1 A PHE 73 A PHE 3 1 Y 1 A THR 74 A THR 4 1 Y 1 A SER 75 A SER 5 1 Y 1 A SER 76 A SER 6 1 Y 1 A GLY 77 A GLY 7 1 Y 1 A SER 78 A SER 8 1 Y 1 A VAL 79 A VAL 9 1 Y 1 A ASN 80 A ASN 10 1 Y 1 A ARG 81 A ARG 11 1 Y 1 A GLY 82 A GLY 12 1 Y 1 A PRO 83 A PRO 13 1 Y 1 A GLU 84 A GLU 14 1 Y 1 A ALA 128 A ALA 58 1 Y 1 A MET 129 A MET 59 1 Y 1 A ILE 130 A ILE 60 1 Y 1 A VAL 131 A VAL 61 1 Y 1 A ARG 132 A ARG 62 1 Y 1 A ASN 133 A ASN 63 1 Y 1 A ALA 134 A ALA 64 1 Y 1 A LYS 135 A LYS 65 1 Y 1 A ASP 136 A ASP 66 1 Y 1 A THR 137 A THR 67 1 Y 1 A ALA 138 A ALA 68 1 Y 1 A HIS 139 A HIS 69 1 Y 1 A SER 375 A SER 305 1 Y 1 A GLU 376 A GLU 306 1 Y 1 A GLU 377 A GLU 307 1 Y 1 A ASP 378 A ASP 308 1 Y 1 A VAL 379 A VAL 309 1 Y 1 A SER 380 A SER 310 1 Y 1 A GLN 381 A GLN 311 1 Y 1 A PHE 382 A PHE 312 1 Y 1 A ASP 383 A ASP 313 1 Y 1 A SER 384 A SER 314 1 Y 1 A LYS 385 A LYS 315 1 Y 1 A PHE 386 A PHE 316 1 Y 1 A THR 387 A THR 317 1 Y 1 A ARG 388 A ARG 318 1 Y 1 A GLN 389 A GLN 319 1 Y 1 A THR 390 A THR 320 1 Y 1 A PRO 391 A PRO 321 1 Y 1 A VAL 392 A VAL 322 1 Y 1 A ASP 393 A ASP 323 1 Y 1 A SER 394 A SER 324 1 Y 1 A PRO 395 A PRO 325 1 Y 1 A ASP 396 A ASP 326 1 Y 1 A ASP 397 A ASP 327 1 Y 1 A SER 398 A SER 328 1 Y 1 A THR 399 A THR 329 1 Y 1 A ARG 217 73.10 -44.42 1 A VAL 249 -141.26 -76.92 1 A ASN 271 -144.55 -158.60 1 A ASP 342 43.90 -121.83 154.670 49.7192 21.330 0.2330 0.1748 0.1775 2.0990 40.4040 1946 20901 20901 5.0500 99.3500 0.2400 RANDOM 1 1.360 MOLECULAR REPLACEMENT 21.7500 0.9000 1.1100 ML FLAT BULK SOLVENT MODEL 2.0990 40.4040 110 2346 25 0 2211 0.008 2300 1.054 3101 0.045 330 0.005 392 16.465 876 0.3168 0.2841 2.1519 143 2582 2725 14 99.0000 0.2678 0.2492 2.2101 125 2615 2740 14 99.0000 0.2554 0.2259 2.2751 144 2598 2742 14 99.0000 0.2714 0.2147 2.3486 151 2570 2721 14 99.0000 0.2373 0.1913 2.4325 158 2590 2748 14 99.0000 0.2090 0.1867 2.5299 143 2612 2755 14 99.0000 0.2638 0.1942 2.6450 157 2632 2789 14 99.0000 0.2572 0.1906 2.7844 133 2602 2735 14 99.0000 0.2480 0.1867 2.9588 154 2610 2764 14 99.0000 0.2770 0.1774 3.1872 130 2635 2765 14 100.0000 0.2224 0.1686 3.5078 134 2634 2768 14 100.0000 0.2082 0.1550 4.0149 121 2633 2754 14 100.0000 0.2160 0.1371 5.0569 143 2636 2779 14 100.0000 0.2043 0.1735 40.4114 110 2665 2775 14 100.0000 2.0990 50.0 3WF5 20923 20923 0 -3.0 0.08 1 30.0 12.1 98.9 2.0990 2.14 2.0 994 1 12.4 98.2 data collection HKL-2000 phasing PHASER refinement PHENIX (phenix.refine: 1.8.1_1168) data reduction HKL-2000 data scaling HKL-2000 Ribosomal protein S6 kinase beta-1 (E.C.2.7.11.1) Crystal structure of S6K1 kinase domain in complex with a pyrazolopyrimidine derivative 4-[4-(1H-benzimidazol-2-yl)piperidin-1-yl]-1H-pyrazolo[3,4-d]pyrimidine 1 N N 2 N N 3 N N 4 N N A ARG 87 A ARG 17 HELX_P A GLU 89 A GLU 19 5 1 3 A LYS 141 A LYS 71 HELX_P A VAL 150 A VAL 80 1 2 10 A GLU 179 A GLU 109 HELX_P A GLY 188 A GLY 118 1 3 10 A MET 191 A MET 121 HELX_P A LYS 212 A LYS 142 1 4 22 A LYS 220 A LYS 150 HELX_P A GLU 222 A GLU 152 5 5 3 A ALA 261 A ALA 191 HELX_P A ARG 267 A ARG 197 1 6 7 A ARG 272 A ARG 202 HELX_P A GLY 289 A GLY 219 1 7 18 A ASN 297 A ASN 227 HELX_P A CYS 308 A CYS 238 1 8 12 A THR 317 A THR 247 HELX_P A LEU 328 A LEU 258 1 9 12 A ASN 331 A ASN 261 HELX_P A ARG 335 A ARG 265 5 10 5 A GLY 341 A GLY 271 HELX_P A ALA 348 A ALA 278 1 11 8 A HIS 349 A HIS 279 HELX_P A ARG 353 A ARG 283 5 12 5 A ASN 356 A ASN 286 HELX_P A ALA 362 A ALA 292 1 13 7 A LYS 370 A LYS 300 HELX_P A GLN 374 A GLN 304 5 14 5 covale 1.326 A HIS 251 A C HIS 181 1_555 A TPO 252 A N TPO 182 1_555 covale 1.324 A TPO 252 A C TPO 182 1_555 A PHE 253 A N PHE 183 1_555 metalc 2.047 A HIS 251 A ND1 HIS 181 1_555 A ZN 401 B ZN ZN 1_555 metalc 2.280 A CYS 254 A SG CYS 184 1_555 A ZN 401 B ZN ZN 1_555 metalc 2.371 A HIS 245 A ND1 HIS 175 1_555 A ZN 401 B ZN ZN 1_555 metalc 2.493 A CYS 240 A SG CYS 170 1_555 A ZN 401 B ZN ZN 1_555 TRANSFERASE/TRANSFERASE INHIBITOR SERINE/THREONINE PROTEIN KINASE DOMAIN, TRANSFERASE, PHOSPHORYLATION, ATP-BINDING, ZINC-BINDING, TRANSFERASE-TRANSFERASE INHIBITOR complex KS6B1_HUMAN UNP 1 78 P23443 SVNRGPEKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVD LIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDF GLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLT QEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFKPLLQSEEDVSQFDSKFTRQTPVDSPDD ST 78 399 3WF5 78 399 P23443 A 1 8 329 1 EXPRESSION TAG GLY 71 3WF5 A P23443 UNP 1 1 EXPRESSION TAG SER 72 3WF5 A P23443 UNP 2 1 EXPRESSION TAG PHE 73 3WF5 A P23443 UNP 3 1 EXPRESSION TAG THR 74 3WF5 A P23443 UNP 4 1 EXPRESSION TAG SER 75 3WF5 A P23443 UNP 5 1 EXPRESSION TAG SER 76 3WF5 A P23443 UNP 6 1 EXPRESSION TAG GLY 77 3WF5 A P23443 UNP 7 5 2 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A PHE 91 A PHE 21 A GLY 100 A GLY 30 A GLY 103 A GLY 33 A LYS 110 A LYS 40 A ILE 119 A ILE 49 A LYS 126 A LYS 56 A LYS 167 A LYS 97 A GLU 173 A GLU 103 A LEU 158 A LEU 88 A THR 164 A THR 94 A ILE 224 A ILE 154 A LEU 226 A LEU 156 A VAL 232 A VAL 162 A LEU 234 A LEU 164 BINDING SITE FOR RESIDUE ZN A 401 Software 4 BINDING SITE FOR RESIDUE FZ8 A 402 Software 14 A CYS 240 A CYS 170 4 1_555 A HIS 245 A HIS 175 4 1_555 A HIS 251 A HIS 181 4 1_555 A CYS 254 A CYS 184 4 1_555 A GLY 98 A GLY 28 14 1_555 A LYS 99 A LYS 29 14 1_555 A GLY 100 A GLY 30 14 1_555 A GLY 103 A GLY 33 14 1_555 A VAL 105 A VAL 35 14 1_555 A ALA 121 A ALA 51 14 1_555 A VAL 156 A VAL 86 14 1_555 A GLU 173 A GLU 103 14 1_555 A LEU 175 A LEU 105 14 1_555 A MET 225 A MET 155 14 1_555 A LYS 241 A LYS 171 14 1_555 A HOH 516 D HOH 14 1_555 A HOH 533 D HOH 14 1_555 A HOH 606 D HOH 14 1_555 92 P 41 21 2