0.020150
-0.000190
-0.000304
0.000000
0.015298
-0.003345
0.000000
0.000000
0.014657
0.00000
0.00000
0.00000
Sato, Y.
Fukai, S.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
2
77.66
89.04
89.46
49.628
65.372
69.846
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
S
N
305
N
O
N
306
N
O
N
307
N
O
N
308
N
O
N
309
N
N
N
310
S
C
N
311
N
C
N
312
N
O
N
313
R
C
N
314
N
O
N
315
N
C
N
316
N
O
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
N
N
327
S
C
N
328
N
C
N
329
N
O
N
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
N
Y
335
N
C
Y
336
N
C
Y
337
N
C
Y
338
N
C
Y
339
N
C
N
340
N
O
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
N
N
354
S
C
N
355
N
C
N
356
N
O
N
357
N
C
Y
358
N
C
Y
359
N
C
Y
360
N
C
Y
361
N
C
Y
362
N
C
Y
363
N
C
N
364
N
O
N
365
N
O
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
N
N
378
S
C
N
379
N
C
N
380
N
O
N
381
N
C
N
382
N
C
N
383
N
C
N
384
N
O
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
doub
N
291
N
doub
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
doub
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
doub
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
doub
Y
326
N
sing
Y
327
N
sing
N
328
N
sing
Y
329
N
sing
Y
330
N
doub
N
331
N
sing
Y
332
N
doub
N
333
N
sing
Y
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
doub
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
Y
349
N
doub
Y
350
N
sing
Y
351
N
sing
N
352
N
sing
Y
353
N
doub
N
354
N
sing
Y
355
N
doub
N
356
N
sing
Y
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
doub
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
US
Nat.Struct.Mol.Biol.
1545-9985
22
222
229
10.1038/nsmb.2970
25686088
Structures of CYLD USP with Met1- or Lys63-linked diubiquitin reveal mechanisms for dual specificity.
2015
10.2210/pdb3wxf/pdb
pdb_00003wxf
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
mirrors
CCD
2013-06-01
RAYONIX MX225HE
SINGLE WAVELENGTH
M
x-ray
1
1.00000
1.0
BL41XU
SPring-8
1.00000
SYNCHROTRON
SPRING-8 BEAMLINE BL41XU
35990.535
Uncharacterized protein
USP domain, UNP residues 578-780, Linker, 850-951
C596S, E674Q, B-box deletion
2
man
polymer
16751.199
Ubiquitin
2
man
polymer
96.063
SULFATE ION
2
syn
non-polymer
18.015
water
147
nat
water
CYLD protein
M1-linked diubiquitin
no
no
SHMGLEVMVGKKKGIQGHYNSSYLDSTLFCLFSFSSVLDTVLLRPRSKTDVEYYKETQELLRTEIVNPLRIHGYVCATKI
MKLRRILEKVEAASGFTSEQKDPEEFLNILFHHILRVDPLLRLRSAGQKVQDCYFYQIFMDKKDKVMVPTSQQLLEWSFI
NSDLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLELDITDLLDDTPLEGGPHQQMELFAVLCIETSHYVAFVKYGSADSA
WLFFDSMADRDGGQNGFNIPQVSRCPEVGEYLKMTPEELHALDPKNIQGYARRLLCDAYMCMYQSPTMSLYK
SHMGLEVMVGKKKGIQGHYNSSYLDSTLFCLFSFSSVLDTVLLRPRSKTDVEYYKETQELLRTEIVNPLRIHGYVCATKI
MKLRRILEKVEAASGFTSEQKDPEEFLNILFHHILRVDPLLRLRSAGQKVQDCYFYQIFMDKKDKVMVPTSQQLLEWSFI
NSDLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLELDITDLLDDTPLEGGPHQQMELFAVLCIETSHYVAFVKYGSADSA
WLFFDSMADRDGGQNGFNIPQVSRCPEVGEYLKMTPEELHALDPKNIQGYARRLLCDAYMCMYQSPTMSLYK
A,C
polypeptide(L)
no
no
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF
VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF
VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
B,D
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
zebra fish
sample
4
206
cyld, cylda
7955
Danio rerio
562
Escherichia coli
Rosetta (DE3)
plasmid
pColdI
zebra fish
sample
211
312
cyld, cylda
7955
Danio rerio
562
Escherichia coli
Rosetta (DE3)
plasmid
pColdI
human
sample
UBC
9606
Homo sapiens
562
Escherichia coli
Rosetta (DE3)
plasmid
pET26b
1
2.10
41.38
VAPOR DIFFUSION, SITTING DROP
8.5
0.1M Tris-HCl buffer, 23% PEG3350, 0.2M ammonium sulfate, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
293
entity_src_gen
software
citation
citation_author
struct_ref_seq_dif
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_ncs_dom_lim
struct_site
repository
Initial release
Refinement description
Source and taxonomy
Database references
Data collection
Database references
Derived calculations
Refinement description
1
0
2015-02-11
1
1
2017-08-16
1
2
2020-01-01
1
3
2023-11-08
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.pdbx_database_id_PubMed
_citation.title
_struct_ref_seq_dif.details
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ncs_dom_lim.beg_auth_comp_id
_struct_ncs_dom_lim.beg_label_asym_id
_struct_ncs_dom_lim.beg_label_comp_id
_struct_ncs_dom_lim.beg_label_seq_id
_struct_ncs_dom_lim.end_auth_comp_id
_struct_ncs_dom_lim.end_label_asym_id
_struct_ncs_dom_lim.end_label_comp_id
_struct_ncs_dom_lim.end_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
PDBJ
Y
PDBJ
2014-07-30
REL
REL
SO4
SULFATE ION
HOH
water
2VHF
PDB entry 2VHF and 1UBQ
PDB
experimental model
1UBQ
PDB entry 2VHF and 1UBQ
PDB
experimental model
SO4
1
3
SO4
SO4
901
C
SO4
2
3
SO4
SO4
902
C
HOH
1
4
HOH
HOH
901
A
HOH
4
4
HOH
HOH
902
A
HOH
5
4
HOH
HOH
903
A
HOH
6
4
HOH
HOH
904
A
HOH
7
4
HOH
HOH
905
A
HOH
9
4
HOH
HOH
906
A
HOH
11
4
HOH
HOH
907
A
HOH
12
4
HOH
HOH
908
A
HOH
13
4
HOH
HOH
909
A
HOH
18
4
HOH
HOH
910
A
HOH
19
4
HOH
HOH
911
A
HOH
21
4
HOH
HOH
912
A
HOH
22
4
HOH
HOH
913
A
HOH
23
4
HOH
HOH
914
A
HOH
37
4
HOH
HOH
915
A
HOH
38
4
HOH
HOH
916
A
HOH
39
4
HOH
HOH
917
A
HOH
40
4
HOH
HOH
918
A
HOH
41
4
HOH
HOH
919
A
HOH
43
4
HOH
HOH
920
A
HOH
47
4
HOH
HOH
921
A
HOH
48
4
HOH
HOH
922
A
HOH
52
4
HOH
HOH
923
A
HOH
53
4
HOH
HOH
924
A
HOH
54
4
HOH
HOH
925
A
HOH
55
4
HOH
HOH
926
A
HOH
57
4
HOH
HOH
927
A
HOH
58
4
HOH
HOH
928
A
HOH
61
4
HOH
HOH
929
A
HOH
63
4
HOH
HOH
930
A
HOH
64
4
HOH
HOH
931
A
HOH
65
4
HOH
HOH
932
A
HOH
70
4
HOH
HOH
933
A
HOH
80
4
HOH
HOH
934
A
HOH
83
4
HOH
HOH
935
A
HOH
84
4
HOH
HOH
936
A
HOH
85
4
HOH
HOH
937
A
HOH
89
4
HOH
HOH
938
A
HOH
94
4
HOH
HOH
939
A
HOH
101
4
HOH
HOH
940
A
HOH
102
4
HOH
HOH
941
A
HOH
105
4
HOH
HOH
942
A
HOH
108
4
HOH
HOH
943
A
HOH
111
4
HOH
HOH
944
A
HOH
114
4
HOH
HOH
945
A
HOH
116
4
HOH
HOH
946
A
HOH
118
4
HOH
HOH
947
A
HOH
120
4
HOH
HOH
948
A
HOH
123
4
HOH
HOH
949
A
HOH
136
4
HOH
HOH
950
A
HOH
142
4
HOH
HOH
951
A
HOH
143
4
HOH
HOH
952
A
HOH
147
4
HOH
HOH
953
A
HOH
148
4
HOH
HOH
954
A
HOH
156
4
HOH
HOH
955
A
HOH
159
4
HOH
HOH
956
A
HOH
164
4
HOH
HOH
957
A
HOH
165
4
HOH
HOH
958
A
HOH
166
4
HOH
HOH
959
A
HOH
167
4
HOH
HOH
960
A
HOH
170
4
HOH
HOH
961
A
HOH
20
4
HOH
HOH
201
B
HOH
44
4
HOH
HOH
202
B
HOH
56
4
HOH
HOH
203
B
HOH
62
4
HOH
HOH
204
B
HOH
67
4
HOH
HOH
205
B
HOH
75
4
HOH
HOH
206
B
HOH
90
4
HOH
HOH
207
B
HOH
112
4
HOH
HOH
208
B
HOH
122
4
HOH
HOH
209
B
HOH
144
4
HOH
HOH
210
B
HOH
145
4
HOH
HOH
211
B
HOH
153
4
HOH
HOH
212
B
HOH
2
4
HOH
HOH
1001
C
HOH
3
4
HOH
HOH
1002
C
HOH
8
4
HOH
HOH
1003
C
HOH
10
4
HOH
HOH
1004
C
HOH
14
4
HOH
HOH
1005
C
HOH
15
4
HOH
HOH
1006
C
HOH
16
4
HOH
HOH
1007
C
HOH
17
4
HOH
HOH
1008
C
HOH
25
4
HOH
HOH
1009
C
HOH
26
4
HOH
HOH
1010
C
HOH
27
4
HOH
HOH
1011
C
HOH
28
4
HOH
HOH
1012
C
HOH
29
4
HOH
HOH
1013
C
HOH
30
4
HOH
HOH
1014
C
HOH
31
4
HOH
HOH
1015
C
HOH
33
4
HOH
HOH
1016
C
HOH
35
4
HOH
HOH
1017
C
HOH
36
4
HOH
HOH
1018
C
HOH
42
4
HOH
HOH
1019
C
HOH
45
4
HOH
HOH
1020
C
HOH
46
4
HOH
HOH
1021
C
HOH
49
4
HOH
HOH
1022
C
HOH
50
4
HOH
HOH
1023
C
HOH
51
4
HOH
HOH
1024
C
HOH
60
4
HOH
HOH
1025
C
HOH
68
4
HOH
HOH
1026
C
HOH
72
4
HOH
HOH
1027
C
HOH
73
4
HOH
HOH
1028
C
HOH
74
4
HOH
HOH
1029
C
HOH
77
4
HOH
HOH
1030
C
HOH
78
4
HOH
HOH
1031
C
HOH
79
4
HOH
HOH
1032
C
HOH
81
4
HOH
HOH
1033
C
HOH
86
4
HOH
HOH
1034
C
HOH
87
4
HOH
HOH
1035
C
HOH
88
4
HOH
HOH
1036
C
HOH
92
4
HOH
HOH
1037
C
HOH
93
4
HOH
HOH
1038
C
HOH
95
4
HOH
HOH
1039
C
HOH
96
4
HOH
HOH
1040
C
HOH
97
4
HOH
HOH
1041
C
HOH
99
4
HOH
HOH
1042
C
HOH
106
4
HOH
HOH
1043
C
HOH
107
4
HOH
HOH
1044
C
HOH
110
4
HOH
HOH
1045
C
HOH
113
4
HOH
HOH
1046
C
HOH
117
4
HOH
HOH
1047
C
HOH
125
4
HOH
HOH
1048
C
HOH
127
4
HOH
HOH
1049
C
HOH
130
4
HOH
HOH
1050
C
HOH
135
4
HOH
HOH
1051
C
HOH
146
4
HOH
HOH
1052
C
HOH
149
4
HOH
HOH
1053
C
HOH
151
4
HOH
HOH
1054
C
HOH
152
4
HOH
HOH
1055
C
HOH
155
4
HOH
HOH
1056
C
HOH
157
4
HOH
HOH
1057
C
HOH
158
4
HOH
HOH
1058
C
HOH
161
4
HOH
HOH
1059
C
HOH
168
4
HOH
HOH
1060
C
HOH
34
4
HOH
HOH
201
D
HOH
59
4
HOH
HOH
202
D
HOH
69
4
HOH
HOH
203
D
HOH
71
4
HOH
HOH
204
D
HOH
98
4
HOH
HOH
205
D
HOH
100
4
HOH
HOH
206
D
HOH
103
4
HOH
HOH
207
D
HOH
121
4
HOH
HOH
208
D
HOH
124
4
HOH
HOH
209
D
HOH
132
4
HOH
HOH
210
D
HOH
134
4
HOH
HOH
211
D
HOH
139
4
HOH
HOH
212
D
HOH
150
4
HOH
HOH
213
D
HOH
169
4
HOH
HOH
214
D
n
1
575
A
n
2
576
A
MET
577
n
3
MET
577
A
GLY
578
n
4
GLY
578
A
LEU
579
n
5
LEU
579
A
GLU
580
n
6
GLU
580
A
VAL
581
n
7
VAL
581
A
MET
582
n
8
MET
582
A
VAL
583
n
9
VAL
583
A
GLY
584
n
10
GLY
584
A
LYS
585
n
11
LYS
585
A
LYS
586
n
12
LYS
586
A
LYS
587
n
13
LYS
587
A
GLY
588
n
14
GLY
588
A
ILE
589
n
15
ILE
589
A
GLN
590
n
16
GLN
590
A
GLY
591
n
17
GLY
591
A
HIS
592
n
18
HIS
592
A
TYR
593
n
19
TYR
593
A
ASN
594
n
20
ASN
594
A
SER
595
n
21
SER
595
A
SER
596
n
22
SER
596
A
TYR
597
n
23
TYR
597
A
LEU
598
n
24
LEU
598
A
ASP
599
n
25
ASP
599
A
SER
600
n
26
SER
600
A
THR
601
n
27
THR
601
A
LEU
602
n
28
LEU
602
A
PHE
603
n
29
PHE
603
A
CYS
604
n
30
CYS
604
A
LEU
605
n
31
LEU
605
A
PHE
606
n
32
PHE
606
A
SER
607
n
33
SER
607
A
PHE
608
n
34
PHE
608
A
SER
609
n
35
SER
609
A
SER
610
n
36
SER
610
A
VAL
611
n
37
VAL
611
A
LEU
612
n
38
LEU
612
A
ASP
613
n
39
ASP
613
A
THR
614
n
40
THR
614
A
VAL
615
n
41
VAL
615
A
LEU
616
n
42
LEU
616
A
LEU
617
n
43
LEU
617
A
ARG
618
n
44
ARG
618
A
PRO
619
n
45
PRO
619
A
ARG
620
n
46
ARG
620
A
SER
621
n
47
SER
621
A
LYS
622
n
48
LYS
622
A
THR
623
n
49
THR
623
A
ASP
624
n
50
ASP
624
A
VAL
625
n
51
VAL
625
A
GLU
626
n
52
GLU
626
A
TYR
627
n
53
TYR
627
A
TYR
628
n
54
TYR
628
A
LYS
629
n
55
LYS
629
A
GLU
630
n
56
GLU
630
A
THR
631
n
57
THR
631
A
GLN
632
n
58
GLN
632
A
GLU
633
n
59
GLU
633
A
LEU
634
n
60
LEU
634
A
LEU
635
n
61
LEU
635
A
ARG
636
n
62
ARG
636
A
THR
637
n
63
THR
637
A
GLU
638
n
64
GLU
638
A
ILE
639
n
65
ILE
639
A
VAL
640
n
66
VAL
640
A
ASN
641
n
67
ASN
641
A
PRO
642
n
68
PRO
642
A
LEU
643
n
69
LEU
643
A
ARG
644
n
70
ARG
644
A
ILE
645
n
71
ILE
645
A
HIS
646
n
72
HIS
646
A
GLY
647
n
73
GLY
647
A
TYR
648
n
74
TYR
648
A
VAL
649
n
75
VAL
649
A
CYS
650
n
76
CYS
650
A
ALA
651
n
77
ALA
651
A
THR
652
n
78
THR
652
A
LYS
653
n
79
LYS
653
A
ILE
654
n
80
ILE
654
A
MET
655
n
81
MET
655
A
LYS
656
n
82
LYS
656
A
LEU
657
n
83
LEU
657
A
ARG
658
n
84
ARG
658
A
ARG
659
n
85
ARG
659
A
ILE
660
n
86
ILE
660
A
LEU
661
n
87
LEU
661
A
GLU
662
n
88
GLU
662
A
LYS
663
n
89
LYS
663
A
VAL
664
n
90
VAL
664
A
GLU
665
n
91
GLU
665
A
ALA
666
n
92
ALA
666
A
ALA
667
n
93
ALA
667
A
SER
668
n
94
SER
668
A
GLY
669
n
95
GLY
669
A
PHE
670
n
96
PHE
670
A
THR
671
n
97
THR
671
A
SER
672
n
98
SER
672
A
GLU
673
n
99
GLU
673
A
GLN
674
n
100
GLN
674
A
LYS
675
n
101
LYS
675
A
ASP
676
n
102
ASP
676
A
PRO
677
n
103
PRO
677
A
GLU
678
n
104
GLU
678
A
GLU
679
n
105
GLU
679
A
PHE
680
n
106
PHE
680
A
LEU
681
n
107
LEU
681
A
ASN
682
n
108
ASN
682
A
ILE
683
n
109
ILE
683
A
LEU
684
n
110
LEU
684
A
PHE
685
n
111
PHE
685
A
HIS
686
n
112
HIS
686
A
HIS
687
n
113
HIS
687
A
ILE
688
n
114
ILE
688
A
LEU
689
n
115
LEU
689
A
ARG
690
n
116
ARG
690
A
VAL
691
n
117
VAL
691
A
ASP
692
n
118
ASP
692
A
PRO
693
n
119
PRO
693
A
LEU
694
n
120
LEU
694
A
LEU
695
n
121
LEU
695
A
ARG
696
n
122
ARG
696
A
LEU
697
n
123
LEU
697
A
ARG
698
n
124
ARG
698
A
SER
699
n
125
SER
699
A
ALA
700
n
126
ALA
700
A
GLY
701
n
127
GLY
701
A
GLN
702
n
128
GLN
702
A
LYS
703
n
129
LYS
703
A
VAL
704
n
130
VAL
704
A
GLN
705
n
131
GLN
705
A
ASP
706
n
132
ASP
706
A
CYS
707
n
133
CYS
707
A
TYR
708
n
134
TYR
708
A
PHE
709
n
135
PHE
709
A
TYR
710
n
136
TYR
710
A
GLN
711
n
137
GLN
711
A
ILE
712
n
138
ILE
712
A
PHE
713
n
139
PHE
713
A
MET
714
n
140
MET
714
A
ASP
715
n
141
ASP
715
A
LYS
716
n
142
LYS
716
A
n
143
717
A
n
144
718
A
n
145
719
A
VAL
720
n
146
VAL
720
A
MET
721
n
147
MET
721
A
VAL
722
n
148
VAL
722
A
PRO
723
n
149
PRO
723
A
THR
724
n
150
THR
724
A
SER
725
n
151
SER
725
A
GLN
726
n
152
GLN
726
A
GLN
727
n
153
GLN
727
A
LEU
728
n
154
LEU
728
A
LEU
729
n
155
LEU
729
A
GLU
730
n
156
GLU
730
A
TRP
731
n
157
TRP
731
A
SER
732
n
158
SER
732
A
PHE
733
n
159
PHE
733
A
ILE
734
n
160
ILE
734
A
ASN
735
n
161
ASN
735
A
SER
736
n
162
SER
736
A
ASP
737
n
163
ASP
737
A
LEU
738
n
164
LEU
738
A
LYS
739
n
165
LYS
739
A
PHE
740
n
166
PHE
740
A
ALA
741
n
167
ALA
741
A
GLU
742
n
168
GLU
742
A
ALA
743
n
169
ALA
743
A
PRO
744
n
170
PRO
744
A
SER
745
n
171
SER
745
A
CYS
746
n
172
CYS
746
A
LEU
747
n
173
LEU
747
A
ILE
748
n
174
ILE
748
A
ILE
749
n
175
ILE
749
A
GLN
750
n
176
GLN
750
A
MET
751
n
177
MET
751
A
PRO
752
n
178
PRO
752
A
ARG
753
n
179
ARG
753
A
PHE
754
n
180
PHE
754
A
GLY
755
n
181
GLY
755
A
LYS
756
n
182
LYS
756
A
ASP
757
n
183
ASP
757
A
PHE
758
n
184
PHE
758
A
LYS
759
n
185
LYS
759
A
MET
760
n
186
MET
760
A
PHE
761
n
187
PHE
761
A
ASN
762
n
188
ASN
762
A
LYS
763
n
189
LYS
763
A
ILE
764
n
190
ILE
764
A
PHE
765
n
191
PHE
765
A
PRO
766
n
192
PRO
766
A
SER
767
n
193
SER
767
A
LEU
768
n
194
LEU
768
A
GLU
769
n
195
GLU
769
A
LEU
770
n
196
LEU
770
A
ASP
771
n
197
ASP
771
A
ILE
772
n
198
ILE
772
A
THR
773
n
199
THR
773
A
ASP
774
n
200
ASP
774
A
LEU
775
n
201
LEU
775
A
LEU
776
n
202
LEU
776
A
ASP
777
n
203
ASP
777
A
ASP
778
n
204
ASP
778
A
n
205
779
A
n
206
780
A
n
207
781
A
n
208
782
A
n
209
783
A
n
210
784
A
n
211
785
A
n
212
786
A
GLN
787
n
213
GLN
787
A
GLN
788
n
214
GLN
788
A
MET
789
n
215
MET
789
A
GLU
790
n
216
GLU
790
A
LEU
791
n
217
LEU
791
A
PHE
792
n
218
PHE
792
A
ALA
793
n
219
ALA
793
A
VAL
794
n
220
VAL
794
A
LEU
795
n
221
LEU
795
A
CYS
796
n
222
CYS
796
A
ILE
797
n
223
ILE
797
A
GLU
798
n
224
GLU
798
A
THR
799
n
225
THR
799
A
SER
800
n
226
SER
800
A
HIS
801
n
227
HIS
801
A
TYR
802
n
228
TYR
802
A
VAL
803
n
229
VAL
803
A
ALA
804
n
230
ALA
804
A
PHE
805
n
231
PHE
805
A
VAL
806
n
232
VAL
806
A
LYS
807
n
233
LYS
807
A
TYR
808
n
234
TYR
808
A
GLY
809
n
235
GLY
809
A
SER
810
n
236
SER
810
A
ALA
811
n
237
ALA
811
A
ASP
812
n
238
ASP
812
A
SER
813
n
239
SER
813
A
ALA
814
n
240
ALA
814
A
TRP
815
n
241
TRP
815
A
LEU
816
n
242
LEU
816
A
PHE
817
n
243
PHE
817
A
PHE
818
n
244
PHE
818
A
ASP
819
n
245
ASP
819
A
SER
820
n
246
SER
820
A
MET
821
n
247
MET
821
A
ALA
822
n
248
ALA
822
A
ASP
823
n
249
ASP
823
A
ARG
824
n
250
ARG
824
A
ASP
825
n
251
ASP
825
A
GLY
826
n
252
GLY
826
A
GLY
827
n
253
GLY
827
A
GLN
828
n
254
GLN
828
A
ASN
829
n
255
ASN
829
A
GLY
830
n
256
GLY
830
A
PHE
831
n
257
PHE
831
A
ASN
832
n
258
ASN
832
A
ILE
833
n
259
ILE
833
A
PRO
834
n
260
PRO
834
A
GLN
835
n
261
GLN
835
A
VAL
836
n
262
VAL
836
A
SER
837
n
263
SER
837
A
ARG
838
n
264
ARG
838
A
CYS
839
n
265
CYS
839
A
PRO
840
n
266
PRO
840
A
GLU
841
n
267
GLU
841
A
VAL
842
n
268
VAL
842
A
GLY
843
n
269
GLY
843
A
GLU
844
n
270
GLU
844
A
TYR
845
n
271
TYR
845
A
LEU
846
n
272
LEU
846
A
LYS
847
n
273
LYS
847
A
MET
848
n
274
MET
848
A
THR
849
n
275
THR
849
A
PRO
850
n
276
PRO
850
A
GLU
851
n
277
GLU
851
A
GLU
852
n
278
GLU
852
A
LEU
853
n
279
LEU
853
A
HIS
854
n
280
HIS
854
A
ALA
855
n
281
ALA
855
A
LEU
856
n
282
LEU
856
A
ASP
857
n
283
ASP
857
A
PRO
858
n
284
PRO
858
A
LYS
859
n
285
LYS
859
A
ASN
860
n
286
ASN
860
A
ILE
861
n
287
ILE
861
A
GLN
862
n
288
GLN
862
A
GLY
863
n
289
GLY
863
A
TYR
864
n
290
TYR
864
A
ALA
865
n
291
ALA
865
A
ARG
866
n
292
ARG
866
A
ARG
867
n
293
ARG
867
A
LEU
868
n
294
LEU
868
A
LEU
869
n
295
LEU
869
A
CYS
870
n
296
CYS
870
A
ASP
871
n
297
ASP
871
A
ALA
872
n
298
ALA
872
A
TYR
873
n
299
TYR
873
A
MET
874
n
300
MET
874
A
CYS
875
n
301
CYS
875
A
MET
876
n
302
MET
876
A
TYR
877
n
303
TYR
877
A
GLN
878
n
304
GLN
878
A
SER
879
n
305
SER
879
A
PRO
880
n
306
PRO
880
A
THR
881
n
307
THR
881
A
MET
882
n
308
MET
882
A
SER
883
n
309
SER
883
A
LEU
884
n
310
LEU
884
A
TYR
885
n
311
TYR
885
A
LYS
886
n
312
LYS
886
A
MET
1
n
1
MET
1
B
GLN
2
n
2
GLN
2
B
ILE
3
n
3
ILE
3
B
PHE
4
n
4
PHE
4
B
VAL
5
n
5
VAL
5
B
LYS
6
n
6
LYS
6
B
THR
7
n
7
THR
7
B
LEU
8
n
8
LEU
8
B
THR
9
n
9
THR
9
B
GLY
10
n
10
GLY
10
B
LYS
11
n
11
LYS
11
B
THR
12
n
12
THR
12
B
ILE
13
n
13
ILE
13
B
THR
14
n
14
THR
14
B
LEU
15
n
15
LEU
15
B
GLU
16
n
16
GLU
16
B
VAL
17
n
17
VAL
17
B
GLU
18
n
18
GLU
18
B
PRO
19
n
19
PRO
19
B
SER
20
n
20
SER
20
B
ASP
21
n
21
ASP
21
B
THR
22
n
22
THR
22
B
ILE
23
n
23
ILE
23
B
GLU
24
n
24
GLU
24
B
ASN
25
n
25
ASN
25
B
VAL
26
n
26
VAL
26
B
LYS
27
n
27
LYS
27
B
ALA
28
n
28
ALA
28
B
LYS
29
n
29
LYS
29
B
ILE
30
n
30
ILE
30
B
GLN
31
n
31
GLN
31
B
ASP
32
n
32
ASP
32
B
LYS
33
n
33
LYS
33
B
GLU
34
n
34
GLU
34
B
GLY
35
n
35
GLY
35
B
ILE
36
n
36
ILE
36
B
PRO
37
n
37
PRO
37
B
PRO
38
n
38
PRO
38
B
ASP
39
n
39
ASP
39
B
GLN
40
n
40
GLN
40
B
GLN
41
n
41
GLN
41
B
ARG
42
n
42
ARG
42
B
LEU
43
n
43
LEU
43
B
ILE
44
n
44
ILE
44
B
PHE
45
n
45
PHE
45
B
ALA
46
n
46
ALA
46
B
GLY
47
n
47
GLY
47
B
LYS
48
n
48
LYS
48
B
GLN
49
n
49
GLN
49
B
LEU
50
n
50
LEU
50
B
GLU
51
n
51
GLU
51
B
ASP
52
n
52
ASP
52
B
GLY
53
n
53
GLY
53
B
ARG
54
n
54
ARG
54
B
THR
55
n
55
THR
55
B
LEU
56
n
56
LEU
56
B
SER
57
n
57
SER
57
B
ASP
58
n
58
ASP
58
B
TYR
59
n
59
TYR
59
B
ASN
60
n
60
ASN
60
B
ILE
61
n
61
ILE
61
B
GLN
62
n
62
GLN
62
B
LYS
63
n
63
LYS
63
B
GLU
64
n
64
GLU
64
B
SER
65
n
65
SER
65
B
THR
66
n
66
THR
66
B
LEU
67
n
67
LEU
67
B
HIS
68
n
68
HIS
68
B
LEU
69
n
69
LEU
69
B
VAL
70
n
70
VAL
70
B
LEU
71
n
71
LEU
71
B
ARG
72
n
72
ARG
72
B
LEU
73
n
73
LEU
73
B
ARG
74
n
74
ARG
74
B
GLY
75
n
75
GLY
75
B
GLY
76
n
76
GLY
76
B
MET
77
n
77
MET
77
B
GLN
78
n
78
GLN
78
B
ILE
79
n
79
ILE
79
B
PHE
80
n
80
PHE
80
B
VAL
81
n
81
VAL
81
B
LYS
82
n
82
LYS
82
B
THR
83
n
83
THR
83
B
LEU
84
n
84
LEU
84
B
THR
85
n
85
THR
85
B
GLY
86
n
86
GLY
86
B
LYS
87
n
87
LYS
87
B
THR
88
n
88
THR
88
B
ILE
89
n
89
ILE
89
B
THR
90
n
90
THR
90
B
LEU
91
n
91
LEU
91
B
GLU
92
n
92
GLU
92
B
VAL
93
n
93
VAL
93
B
GLU
94
n
94
GLU
94
B
PRO
95
n
95
PRO
95
B
SER
96
n
96
SER
96
B
ASP
97
n
97
ASP
97
B
THR
98
n
98
THR
98
B
ILE
99
n
99
ILE
99
B
GLU
100
n
100
GLU
100
B
ASN
101
n
101
ASN
101
B
VAL
102
n
102
VAL
102
B
LYS
103
n
103
LYS
103
B
ALA
104
n
104
ALA
104
B
LYS
105
n
105
LYS
105
B
ILE
106
n
106
ILE
106
B
GLN
107
n
107
GLN
107
B
ASP
108
n
108
ASP
108
B
LYS
109
n
109
LYS
109
B
GLU
110
n
110
GLU
110
B
GLY
111
n
111
GLY
111
B
ILE
112
n
112
ILE
112
B
PRO
113
n
113
PRO
113
B
PRO
114
n
114
PRO
114
B
ASP
115
n
115
ASP
115
B
GLN
116
n
116
GLN
116
B
GLN
117
n
117
GLN
117
B
ARG
118
n
118
ARG
118
B
LEU
119
n
119
LEU
119
B
ILE
120
n
120
ILE
120
B
PHE
121
n
121
PHE
121
B
ALA
122
n
122
ALA
122
B
GLY
123
n
123
GLY
123
B
LYS
124
n
124
LYS
124
B
GLN
125
n
125
GLN
125
B
LEU
126
n
126
LEU
126
B
GLU
127
n
127
GLU
127
B
ASP
128
n
128
ASP
128
B
GLY
129
n
129
GLY
129
B
ARG
130
n
130
ARG
130
B
THR
131
n
131
THR
131
B
LEU
132
n
132
LEU
132
B
SER
133
n
133
SER
133
B
ASP
134
n
134
ASP
134
B
TYR
135
n
135
TYR
135
B
ASN
136
n
136
ASN
136
B
ILE
137
n
137
ILE
137
B
GLN
138
n
138
GLN
138
B
LYS
139
n
139
LYS
139
B
GLU
140
n
140
GLU
140
B
SER
141
n
141
SER
141
B
THR
142
n
142
THR
142
B
LEU
143
n
143
LEU
143
B
HIS
144
n
144
HIS
144
B
LEU
145
n
145
LEU
145
B
VAL
146
n
146
VAL
146
B
LEU
147
n
147
LEU
147
B
ARG
148
n
148
ARG
148
B
n
1
575
C
n
2
576
C
n
3
577
C
GLY
578
n
4
GLY
578
C
LEU
579
n
5
LEU
579
C
GLU
580
n
6
GLU
580
C
VAL
581
n
7
VAL
581
C
MET
582
n
8
MET
582
C
VAL
583
n
9
VAL
583
C
GLY
584
n
10
GLY
584
C
LYS
585
n
11
LYS
585
C
LYS
586
n
12
LYS
586
C
LYS
587
n
13
LYS
587
C
GLY
588
n
14
GLY
588
C
ILE
589
n
15
ILE
589
C
GLN
590
n
16
GLN
590
C
GLY
591
n
17
GLY
591
C
HIS
592
n
18
HIS
592
C
TYR
593
n
19
TYR
593
C
ASN
594
n
20
ASN
594
C
SER
595
n
21
SER
595
C
SER
596
n
22
SER
596
C
TYR
597
n
23
TYR
597
C
LEU
598
n
24
LEU
598
C
ASP
599
n
25
ASP
599
C
SER
600
n
26
SER
600
C
THR
601
n
27
THR
601
C
LEU
602
n
28
LEU
602
C
PHE
603
n
29
PHE
603
C
CYS
604
n
30
CYS
604
C
LEU
605
n
31
LEU
605
C
PHE
606
n
32
PHE
606
C
SER
607
n
33
SER
607
C
PHE
608
n
34
PHE
608
C
SER
609
n
35
SER
609
C
SER
610
n
36
SER
610
C
VAL
611
n
37
VAL
611
C
LEU
612
n
38
LEU
612
C
ASP
613
n
39
ASP
613
C
THR
614
n
40
THR
614
C
VAL
615
n
41
VAL
615
C
LEU
616
n
42
LEU
616
C
LEU
617
n
43
LEU
617
C
ARG
618
n
44
ARG
618
C
PRO
619
n
45
PRO
619
C
ARG
620
n
46
ARG
620
C
SER
621
n
47
SER
621
C
LYS
622
n
48
LYS
622
C
THR
623
n
49
THR
623
C
ASP
624
n
50
ASP
624
C
VAL
625
n
51
VAL
625
C
GLU
626
n
52
GLU
626
C
TYR
627
n
53
TYR
627
C
TYR
628
n
54
TYR
628
C
LYS
629
n
55
LYS
629
C
GLU
630
n
56
GLU
630
C
THR
631
n
57
THR
631
C
GLN
632
n
58
GLN
632
C
GLU
633
n
59
GLU
633
C
LEU
634
n
60
LEU
634
C
LEU
635
n
61
LEU
635
C
ARG
636
n
62
ARG
636
C
THR
637
n
63
THR
637
C
GLU
638
n
64
GLU
638
C
ILE
639
n
65
ILE
639
C
VAL
640
n
66
VAL
640
C
ASN
641
n
67
ASN
641
C
PRO
642
n
68
PRO
642
C
LEU
643
n
69
LEU
643
C
ARG
644
n
70
ARG
644
C
ILE
645
n
71
ILE
645
C
HIS
646
n
72
HIS
646
C
GLY
647
n
73
GLY
647
C
TYR
648
n
74
TYR
648
C
VAL
649
n
75
VAL
649
C
CYS
650
n
76
CYS
650
C
ALA
651
n
77
ALA
651
C
THR
652
n
78
THR
652
C
LYS
653
n
79
LYS
653
C
ILE
654
n
80
ILE
654
C
MET
655
n
81
MET
655
C
LYS
656
n
82
LYS
656
C
LEU
657
n
83
LEU
657
C
ARG
658
n
84
ARG
658
C
ARG
659
n
85
ARG
659
C
ILE
660
n
86
ILE
660
C
LEU
661
n
87
LEU
661
C
GLU
662
n
88
GLU
662
C
LYS
663
n
89
LYS
663
C
VAL
664
n
90
VAL
664
C
GLU
665
n
91
GLU
665
C
ALA
666
n
92
ALA
666
C
ALA
667
n
93
ALA
667
C
SER
668
n
94
SER
668
C
GLY
669
n
95
GLY
669
C
PHE
670
n
96
PHE
670
C
THR
671
n
97
THR
671
C
SER
672
n
98
SER
672
C
GLU
673
n
99
GLU
673
C
GLN
674
n
100
GLN
674
C
LYS
675
n
101
LYS
675
C
ASP
676
n
102
ASP
676
C
PRO
677
n
103
PRO
677
C
GLU
678
n
104
GLU
678
C
GLU
679
n
105
GLU
679
C
PHE
680
n
106
PHE
680
C
LEU
681
n
107
LEU
681
C
ASN
682
n
108
ASN
682
C
ILE
683
n
109
ILE
683
C
LEU
684
n
110
LEU
684
C
PHE
685
n
111
PHE
685
C
HIS
686
n
112
HIS
686
C
HIS
687
n
113
HIS
687
C
ILE
688
n
114
ILE
688
C
LEU
689
n
115
LEU
689
C
ARG
690
n
116
ARG
690
C
VAL
691
n
117
VAL
691
C
ASP
692
n
118
ASP
692
C
PRO
693
n
119
PRO
693
C
LEU
694
n
120
LEU
694
C
LEU
695
n
121
LEU
695
C
ARG
696
n
122
ARG
696
C
LEU
697
n
123
LEU
697
C
ARG
698
n
124
ARG
698
C
SER
699
n
125
SER
699
C
ALA
700
n
126
ALA
700
C
GLY
701
n
127
GLY
701
C
GLN
702
n
128
GLN
702
C
LYS
703
n
129
LYS
703
C
VAL
704
n
130
VAL
704
C
GLN
705
n
131
GLN
705
C
ASP
706
n
132
ASP
706
C
CYS
707
n
133
CYS
707
C
TYR
708
n
134
TYR
708
C
PHE
709
n
135
PHE
709
C
TYR
710
n
136
TYR
710
C
GLN
711
n
137
GLN
711
C
ILE
712
n
138
ILE
712
C
PHE
713
n
139
PHE
713
C
MET
714
n
140
MET
714
C
ASP
715
n
141
ASP
715
C
LYS
716
n
142
LYS
716
C
LYS
717
n
143
LYS
717
C
n
144
718
C
n
145
719
C
VAL
720
n
146
VAL
720
C
MET
721
n
147
MET
721
C
VAL
722
n
148
VAL
722
C
PRO
723
n
149
PRO
723
C
THR
724
n
150
THR
724
C
SER
725
n
151
SER
725
C
GLN
726
n
152
GLN
726
C
GLN
727
n
153
GLN
727
C
LEU
728
n
154
LEU
728
C
LEU
729
n
155
LEU
729
C
GLU
730
n
156
GLU
730
C
TRP
731
n
157
TRP
731
C
SER
732
n
158
SER
732
C
PHE
733
n
159
PHE
733
C
ILE
734
n
160
ILE
734
C
ASN
735
n
161
ASN
735
C
SER
736
n
162
SER
736
C
ASP
737
n
163
ASP
737
C
LEU
738
n
164
LEU
738
C
LYS
739
n
165
LYS
739
C
PHE
740
n
166
PHE
740
C
ALA
741
n
167
ALA
741
C
GLU
742
n
168
GLU
742
C
ALA
743
n
169
ALA
743
C
PRO
744
n
170
PRO
744
C
SER
745
n
171
SER
745
C
CYS
746
n
172
CYS
746
C
LEU
747
n
173
LEU
747
C
ILE
748
n
174
ILE
748
C
ILE
749
n
175
ILE
749
C
GLN
750
n
176
GLN
750
C
MET
751
n
177
MET
751
C
PRO
752
n
178
PRO
752
C
ARG
753
n
179
ARG
753
C
PHE
754
n
180
PHE
754
C
GLY
755
n
181
GLY
755
C
LYS
756
n
182
LYS
756
C
ASP
757
n
183
ASP
757
C
PHE
758
n
184
PHE
758
C
LYS
759
n
185
LYS
759
C
MET
760
n
186
MET
760
C
PHE
761
n
187
PHE
761
C
ASN
762
n
188
ASN
762
C
LYS
763
n
189
LYS
763
C
ILE
764
n
190
ILE
764
C
PHE
765
n
191
PHE
765
C
PRO
766
n
192
PRO
766
C
SER
767
n
193
SER
767
C
LEU
768
n
194
LEU
768
C
GLU
769
n
195
GLU
769
C
LEU
770
n
196
LEU
770
C
ASP
771
n
197
ASP
771
C
ILE
772
n
198
ILE
772
C
THR
773
n
199
THR
773
C
ASP
774
n
200
ASP
774
C
LEU
775
n
201
LEU
775
C
LEU
776
n
202
LEU
776
C
ASP
777
n
203
ASP
777
C
ASP
778
n
204
ASP
778
C
n
205
779
C
n
206
780
C
n
207
781
C
n
208
782
C
n
209
783
C
n
210
784
C
n
211
785
C
n
212
786
C
GLN
787
n
213
GLN
787
C
GLN
788
n
214
GLN
788
C
MET
789
n
215
MET
789
C
GLU
790
n
216
GLU
790
C
LEU
791
n
217
LEU
791
C
PHE
792
n
218
PHE
792
C
ALA
793
n
219
ALA
793
C
VAL
794
n
220
VAL
794
C
LEU
795
n
221
LEU
795
C
CYS
796
n
222
CYS
796
C
ILE
797
n
223
ILE
797
C
GLU
798
n
224
GLU
798
C
THR
799
n
225
THR
799
C
SER
800
n
226
SER
800
C
HIS
801
n
227
HIS
801
C
TYR
802
n
228
TYR
802
C
VAL
803
n
229
VAL
803
C
ALA
804
n
230
ALA
804
C
PHE
805
n
231
PHE
805
C
VAL
806
n
232
VAL
806
C
LYS
807
n
233
LYS
807
C
TYR
808
n
234
TYR
808
C
GLY
809
n
235
GLY
809
C
SER
810
n
236
SER
810
C
ALA
811
n
237
ALA
811
C
ASP
812
n
238
ASP
812
C
SER
813
n
239
SER
813
C
ALA
814
n
240
ALA
814
C
TRP
815
n
241
TRP
815
C
LEU
816
n
242
LEU
816
C
PHE
817
n
243
PHE
817
C
PHE
818
n
244
PHE
818
C
ASP
819
n
245
ASP
819
C
SER
820
n
246
SER
820
C
MET
821
n
247
MET
821
C
ALA
822
n
248
ALA
822
C
ASP
823
n
249
ASP
823
C
ARG
824
n
250
ARG
824
C
ASP
825
n
251
ASP
825
C
GLY
826
n
252
GLY
826
C
GLY
827
n
253
GLY
827
C
GLN
828
n
254
GLN
828
C
ASN
829
n
255
ASN
829
C
GLY
830
n
256
GLY
830
C
PHE
831
n
257
PHE
831
C
ASN
832
n
258
ASN
832
C
ILE
833
n
259
ILE
833
C
PRO
834
n
260
PRO
834
C
GLN
835
n
261
GLN
835
C
VAL
836
n
262
VAL
836
C
SER
837
n
263
SER
837
C
ARG
838
n
264
ARG
838
C
CYS
839
n
265
CYS
839
C
PRO
840
n
266
PRO
840
C
GLU
841
n
267
GLU
841
C
VAL
842
n
268
VAL
842
C
GLY
843
n
269
GLY
843
C
GLU
844
n
270
GLU
844
C
TYR
845
n
271
TYR
845
C
LEU
846
n
272
LEU
846
C
LYS
847
n
273
LYS
847
C
MET
848
n
274
MET
848
C
THR
849
n
275
THR
849
C
PRO
850
n
276
PRO
850
C
GLU
851
n
277
GLU
851
C
GLU
852
n
278
GLU
852
C
LEU
853
n
279
LEU
853
C
HIS
854
n
280
HIS
854
C
ALA
855
n
281
ALA
855
C
LEU
856
n
282
LEU
856
C
ASP
857
n
283
ASP
857
C
PRO
858
n
284
PRO
858
C
LYS
859
n
285
LYS
859
C
ASN
860
n
286
ASN
860
C
ILE
861
n
287
ILE
861
C
GLN
862
n
288
GLN
862
C
GLY
863
n
289
GLY
863
C
TYR
864
n
290
TYR
864
C
ALA
865
n
291
ALA
865
C
ARG
866
n
292
ARG
866
C
ARG
867
n
293
ARG
867
C
LEU
868
n
294
LEU
868
C
LEU
869
n
295
LEU
869
C
CYS
870
n
296
CYS
870
C
ASP
871
n
297
ASP
871
C
ALA
872
n
298
ALA
872
C
TYR
873
n
299
TYR
873
C
MET
874
n
300
MET
874
C
CYS
875
n
301
CYS
875
C
MET
876
n
302
MET
876
C
TYR
877
n
303
TYR
877
C
GLN
878
n
304
GLN
878
C
SER
879
n
305
SER
879
C
PRO
880
n
306
PRO
880
C
THR
881
n
307
THR
881
C
MET
882
n
308
MET
882
C
SER
883
n
309
SER
883
C
LEU
884
n
310
LEU
884
C
TYR
885
n
311
TYR
885
C
LYS
886
n
312
LYS
886
C
MET
1
n
1
MET
1
D
GLN
2
n
2
GLN
2
D
ILE
3
n
3
ILE
3
D
PHE
4
n
4
PHE
4
D
VAL
5
n
5
VAL
5
D
LYS
6
n
6
LYS
6
D
THR
7
n
7
THR
7
D
LEU
8
n
8
LEU
8
D
THR
9
n
9
THR
9
D
GLY
10
n
10
GLY
10
D
LYS
11
n
11
LYS
11
D
THR
12
n
12
THR
12
D
ILE
13
n
13
ILE
13
D
THR
14
n
14
THR
14
D
LEU
15
n
15
LEU
15
D
GLU
16
n
16
GLU
16
D
VAL
17
n
17
VAL
17
D
GLU
18
n
18
GLU
18
D
PRO
19
n
19
PRO
19
D
SER
20
n
20
SER
20
D
ASP
21
n
21
ASP
21
D
THR
22
n
22
THR
22
D
ILE
23
n
23
ILE
23
D
GLU
24
n
24
GLU
24
D
ASN
25
n
25
ASN
25
D
VAL
26
n
26
VAL
26
D
LYS
27
n
27
LYS
27
D
ALA
28
n
28
ALA
28
D
LYS
29
n
29
LYS
29
D
ILE
30
n
30
ILE
30
D
GLN
31
n
31
GLN
31
D
ASP
32
n
32
ASP
32
D
LYS
33
n
33
LYS
33
D
GLU
34
n
34
GLU
34
D
GLY
35
n
35
GLY
35
D
ILE
36
n
36
ILE
36
D
PRO
37
n
37
PRO
37
D
PRO
38
n
38
PRO
38
D
ASP
39
n
39
ASP
39
D
GLN
40
n
40
GLN
40
D
GLN
41
n
41
GLN
41
D
ARG
42
n
42
ARG
42
D
LEU
43
n
43
LEU
43
D
ILE
44
n
44
ILE
44
D
PHE
45
n
45
PHE
45
D
ALA
46
n
46
ALA
46
D
GLY
47
n
47
GLY
47
D
LYS
48
n
48
LYS
48
D
GLN
49
n
49
GLN
49
D
LEU
50
n
50
LEU
50
D
GLU
51
n
51
GLU
51
D
ASP
52
n
52
ASP
52
D
GLY
53
n
53
GLY
53
D
ARG
54
n
54
ARG
54
D
THR
55
n
55
THR
55
D
LEU
56
n
56
LEU
56
D
SER
57
n
57
SER
57
D
ASP
58
n
58
ASP
58
D
TYR
59
n
59
TYR
59
D
ASN
60
n
60
ASN
60
D
ILE
61
n
61
ILE
61
D
GLN
62
n
62
GLN
62
D
LYS
63
n
63
LYS
63
D
GLU
64
n
64
GLU
64
D
SER
65
n
65
SER
65
D
THR
66
n
66
THR
66
D
LEU
67
n
67
LEU
67
D
HIS
68
n
68
HIS
68
D
LEU
69
n
69
LEU
69
D
VAL
70
n
70
VAL
70
D
LEU
71
n
71
LEU
71
D
ARG
72
n
72
ARG
72
D
LEU
73
n
73
LEU
73
D
ARG
74
n
74
ARG
74
D
GLY
75
n
75
GLY
75
D
GLY
76
n
76
GLY
76
D
MET
77
n
77
MET
77
D
GLN
78
n
78
GLN
78
D
ILE
79
n
79
ILE
79
D
PHE
80
n
80
PHE
80
D
VAL
81
n
81
VAL
81
D
LYS
82
n
82
LYS
82
D
THR
83
n
83
THR
83
D
LEU
84
n
84
LEU
84
D
THR
85
n
85
THR
85
D
GLY
86
n
86
GLY
86
D
LYS
87
n
87
LYS
87
D
THR
88
n
88
THR
88
D
ILE
89
n
89
ILE
89
D
THR
90
n
90
THR
90
D
LEU
91
n
91
LEU
91
D
GLU
92
n
92
GLU
92
D
VAL
93
n
93
VAL
93
D
GLU
94
n
94
GLU
94
D
PRO
95
n
95
PRO
95
D
SER
96
n
96
SER
96
D
ASP
97
n
97
ASP
97
D
THR
98
n
98
THR
98
D
ILE
99
n
99
ILE
99
D
GLU
100
n
100
GLU
100
D
ASN
101
n
101
ASN
101
D
VAL
102
n
102
VAL
102
D
LYS
103
n
103
LYS
103
D
ALA
104
n
104
ALA
104
D
LYS
105
n
105
LYS
105
D
ILE
106
n
106
ILE
106
D
GLN
107
n
107
GLN
107
D
ASP
108
n
108
ASP
108
D
LYS
109
n
109
LYS
109
D
GLU
110
n
110
GLU
110
D
GLY
111
n
111
GLY
111
D
ILE
112
n
112
ILE
112
D
PRO
113
n
113
PRO
113
D
PRO
114
n
114
PRO
114
D
ASP
115
n
115
ASP
115
D
GLN
116
n
116
GLN
116
D
GLN
117
n
117
GLN
117
D
ARG
118
n
118
ARG
118
D
LEU
119
n
119
LEU
119
D
ILE
120
n
120
ILE
120
D
PHE
121
n
121
PHE
121
D
ALA
122
n
122
ALA
122
D
GLY
123
n
123
GLY
123
D
LYS
124
n
124
LYS
124
D
GLN
125
n
125
GLN
125
D
LEU
126
n
126
LEU
126
D
GLU
127
n
127
GLU
127
D
ASP
128
n
128
ASP
128
D
GLY
129
n
129
GLY
129
D
ARG
130
n
130
ARG
130
D
THR
131
n
131
THR
131
D
LEU
132
n
132
LEU
132
D
SER
133
n
133
SER
133
D
ASP
134
n
134
ASP
134
D
TYR
135
n
135
TYR
135
D
ASN
136
n
136
ASN
136
D
ILE
137
n
137
ILE
137
D
GLN
138
n
138
GLN
138
D
LYS
139
n
139
LYS
139
D
GLU
140
n
140
GLU
140
D
SER
141
n
141
SER
141
D
THR
142
n
142
THR
142
D
LEU
143
n
143
LEU
143
D
HIS
144
n
144
HIS
144
D
LEU
145
n
145
LEU
145
D
VAL
146
n
146
VAL
146
D
LEU
147
n
147
LEU
147
D
ARG
148
n
148
ARG
148
D
0.6006
0.0575
-0.1983
0.6972
-0.2667
0.3238
-0.0117
0.0264
0.0077
0.1127
0.0384
-0.0179
-0.0326
-0.0161
-0.0268
0.0278
0.0045
-0.0141
0.1209
-0.0145
0.0195
refined
-9.9572
16.5450
19.4032
X-RAY DIFFRACTION
0.9011
0.8756
0.1819
4.4782
2.8019
1.9397
-0.0298
0.1502
0.1641
0.0515
0.1289
-0.0046
0.0625
0.0173
-0.0991
0.0433
-0.0095
-0.0514
0.0278
0.0339
0.0827
refined
-15.0283
24.3645
1.5851
X-RAY DIFFRACTION
0.8381
-0.1043
0.3129
0.5467
-0.1235
0.3264
-0.0192
0.0099
0.0220
-0.0571
0.0197
-0.0076
0.0388
0.0138
-0.0005
0.0217
0.0016
-0.0156
0.0963
-0.0146
0.0270
refined
13.3521
-16.8353
-19.5529
X-RAY DIFFRACTION
0.6455
-0.9531
-0.5976
3.6358
2.7747
2.1937
-0.3004
-0.1438
-0.2171
0.2952
0.1479
0.3227
0.1641
0.1208
0.1525
0.1457
0.0801
0.0857
0.0744
-0.0003
0.1309
refined
9.0888
-25.0151
-2.3112
X-RAY DIFFRACTION
A
577
A
886
X-RAY DIFFRACTION
1
B
1
B
148
X-RAY DIFFRACTION
2
C
578
C
886
X-RAY DIFFRACTION
3
D
1
D
148
X-RAY DIFFRACTION
4
author_and_software_defined_assembly
PISA
2
dimeric
author_and_software_defined_assembly
PISA
2
dimeric
3710
-12
19770
3930
-38
19590
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
GLY
584
A
N
GLY
10
A
O
VAL
836
A
O
VAL
262
A
O
PHE
831
A
O
PHE
257
A
N
ASP
825
A
N
ASP
251
A
O
PHE
818
A
O
PHE
244
A
N
ALA
804
A
N
ALA
230
A
O
PHE
805
A
O
PHE
231
A
N
VAL
794
A
N
VAL
220
A
N
ALA
793
A
N
ALA
219
A
O
MET
876
A
O
MET
302
A
O
CYS
875
A
O
CYS
301
A
N
ILE
749
A
N
ILE
175
A
O
GLN
750
A
O
GLN
176
A
N
TYR
710
A
N
TYR
136
A
N
GLY
584
A
N
GLY
10
A
O
VAL
836
A
O
VAL
262
A
O
PHE
831
A
O
PHE
257
A
N
ASP
825
A
N
ASP
251
A
O
PHE
818
A
O
PHE
244
A
N
ALA
804
A
N
ALA
230
A
O
PHE
805
A
O
PHE
231
A
N
VAL
794
A
N
VAL
220
A
O
MET
789
A
O
MET
215
A
N
LEU
770
A
N
LEU
196
A
N
GLY
588
A
N
GLY
14
A
O
VAL
649
A
O
VAL
75
A
O
CYS
707
A
O
CYS
133
A
N
LEU
695
A
N
LEU
121
A
N
ARG
698
A
N
ARG
124
A
O
LYS
739
A
O
LYS
165
B
O
ILE
13
B
O
ILE
13
B
N
VAL
5
B
N
VAL
5
B
N
PHE
4
B
N
PHE
4
B
O
LEU
67
B
O
LEU
67
B
O
HIS
68
B
O
HIS
68
B
N
ILE
44
B
N
ILE
44
B
N
PHE
45
B
N
PHE
45
B
O
LYS
48
B
O
LYS
48
B
O
ILE
89
B
O
ILE
89
B
N
VAL
81
B
N
VAL
81
B
N
PHE
80
B
N
PHE
80
B
O
LEU
143
B
O
LEU
143
B
O
HIS
144
B
O
HIS
144
B
N
ILE
120
B
N
ILE
120
B
N
PHE
121
B
N
PHE
121
B
O
LYS
124
B
O
LYS
124
C
N
GLY
584
C
N
GLY
10
C
O
VAL
836
C
O
VAL
262
C
O
PHE
831
C
O
PHE
257
C
N
ASP
825
C
N
ASP
251
C
O
PHE
818
C
O
PHE
244
C
N
ALA
804
C
N
ALA
230
C
O
PHE
805
C
O
PHE
231
C
N
VAL
794
C
N
VAL
220
C
N
ALA
793
C
N
ALA
219
C
O
MET
876
C
O
MET
302
C
O
CYS
875
C
O
CYS
301
C
N
ILE
749
C
N
ILE
175
C
O
GLN
750
C
O
GLN
176
C
N
TYR
710
C
N
TYR
136
C
N
GLY
584
C
N
GLY
10
C
O
VAL
836
C
O
VAL
262
C
O
PHE
831
C
O
PHE
257
C
N
ASP
825
C
N
ASP
251
C
O
PHE
818
C
O
PHE
244
C
N
ALA
804
C
N
ALA
230
C
O
PHE
805
C
O
PHE
231
C
N
VAL
794
C
N
VAL
220
C
O
MET
789
C
O
MET
215
C
N
LEU
770
C
N
LEU
196
C
N
GLY
588
C
N
GLY
14
C
O
VAL
649
C
O
VAL
75
C
O
GLN
705
C
O
GLN
131
C
N
LEU
697
C
N
LEU
123
C
N
ARG
698
C
N
ARG
124
C
O
LYS
739
C
O
LYS
165
D
O
ILE
13
D
O
ILE
13
D
N
VAL
5
D
N
VAL
5
D
N
PHE
4
D
N
PHE
4
D
O
LEU
67
D
O
LEU
67
D
O
HIS
68
D
O
HIS
68
D
N
ILE
44
D
N
ILE
44
D
N
PHE
45
D
N
PHE
45
D
O
LYS
48
D
O
LYS
48
D
O
ILE
89
D
O
ILE
89
D
N
VAL
81
D
N
VAL
81
D
N
PHE
80
D
N
PHE
80
D
O
LEU
143
D
O
LEU
143
D
O
HIS
144
D
O
HIS
144
D
N
ILE
120
D
N
ILE
120
D
N
PHE
121
D
N
PHE
121
D
O
LYS
124
D
O
LYS
124
1
A
SER
575
A
SER
1
1
Y
1
A
HIS
576
A
HIS
2
1
Y
1
A
LYS
717
A
LYS
143
1
Y
1
A
ASP
718
A
ASP
144
1
Y
1
A
LYS
719
A
LYS
145
1
Y
1
A
THR
779
A
THR
205
1
Y
1
A
PRO
780
A
PRO
206
1
Y
1
A
LEU
781
A
LEU
207
1
Y
1
A
GLU
782
A
GLU
208
1
Y
1
A
GLY
783
A
GLY
209
1
Y
1
A
GLY
784
A
GLY
210
1
Y
1
A
PRO
785
A
PRO
211
1
Y
1
A
HIS
786
A
HIS
212
1
Y
1
C
SER
575
C
SER
1
1
Y
1
C
HIS
576
C
HIS
2
1
Y
1
C
MET
577
C
MET
3
1
Y
1
C
ASP
718
C
ASP
144
1
Y
1
C
LYS
719
C
LYS
145
1
Y
1
C
THR
779
C
THR
205
1
Y
1
C
PRO
780
C
PRO
206
1
Y
1
C
LEU
781
C
LEU
207
1
Y
1
C
GLU
782
C
GLU
208
1
Y
1
C
GLY
783
C
GLY
209
1
Y
1
C
GLY
784
C
GLY
210
1
Y
1
C
PRO
785
C
PRO
211
1
Y
1
C
HIS
786
C
HIS
212
1
Y
1
A
B
OH
O
TYR
LEU
802
73
2.07
1
D
D
OG1
OG
THR
SER
55
57
2.09
1
A
A
O
NZ
SER
LYS
668
675
2.17
1
A
A
SER
ALA
699
700
-138.38
1
-11.55
1.90
111.40
99.85
A
A
A
CB
CA
C
VAL
VAL
VAL
611
611
611
N
1
-3.14
0.50
120.30
117.16
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
658
658
658
N
1
-17.88
2.70
111.00
93.12
A
A
A
N
CA
C
LEU
LEU
LEU
689
689
689
N
1
-3.10
0.50
120.30
117.20
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
753
753
753
N
1
3.30
0.50
120.30
123.60
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
824
824
824
N
1
-3.88
0.50
120.30
116.42
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
824
824
824
N
1
-12.81
1.90
111.40
98.59
C
C
C
CB
CA
C
VAL
VAL
VAL
611
611
611
N
1
-3.14
0.50
120.30
117.16
C
C
C
NE
CZ
NH2
ARG
ARG
ARG
658
658
658
N
1
-17.27
2.70
111.00
93.73
C
C
C
N
CA
C
LEU
LEU
LEU
689
689
689
N
1
5.89
0.90
118.30
124.19
C
C
C
CB
CG
OD1
ASP
ASP
ASP
819
819
819
N
1
-5.58
0.90
118.30
112.72
C
C
C
CB
CG
OD2
ASP
ASP
ASP
819
819
819
N
1
3.19
0.50
120.30
123.49
C
C
C
NE
CZ
NH1
ARG
ARG
ARG
824
824
824
N
1
-3.54
0.50
120.30
116.76
C
C
C
NE
CZ
NH2
ARG
ARG
ARG
824
824
824
N
1
A
TYR
593
54.27
74.04
1
A
SER
672
-143.03
-19.67
1
A
GLN
702
-71.79
-162.19
1
A
THR
799
-138.10
-39.50
1
B
LYS
63
-25.57
125.74
1
B
LYS
139
-170.73
-179.81
1
C
TYR
593
47.51
76.39
1
C
TYR
627
84.46
-8.96
1
C
THR
799
-138.19
-39.01
1
D
LYS
63
-33.04
131.47
129.140
37.9480
9.220
0.4300
-0.1000
0.1500
-0.8100
0.2800
0.4700
0.944
0.921
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.2285
0.1871
0.1892
2.30
49.62
1874
38724
35341
5.0
97.63
16.4060
0.1890
RANDOM
1
THROUGHOUT
0.000
MOLECULAR REPLACEMENT
0.4920
0.2460
0.80
0.80
1.20
PDB entry 2VHF and 1UBQ
MAXIMUM LIKELIHOOD
MASK
2.30
49.62
147
7358
10
0
7201
0.014
0.019
7341
0.005
0.020
7148
1.729
1.982
9893
1.135
3.000
16504
6.635
5.000
886
38.509
24.615
338
20.118
15.000
1395
23.167
15.000
42
0.107
0.200
1114
0.008
0.021
8120
0.005
0.020
1618
2.231
2.705
3568
2.230
2.704
3567
3.655
4.040
4446
1
A
1
18944
X-RAY DIFFRACTION
interatomic distance
0.09
0.05
2
C
1
18944
X-RAY DIFFRACTION
interatomic distance
0.09
0.05
1
B
2
8611
X-RAY DIFFRACTION
interatomic distance
0.15
0.05
2
D
2
8611
X-RAY DIFFRACTION
interatomic distance
0.15
0.05
0.2650
0.2520
2.3600
136
2567
2703
20
95.2400
2.30
50.0
3WXF
38724
38724
0.0
0.095
1
97.6
2.30
2.34
2.41
0.410
1
95.4
phasing
MOLREP
refinement
REFMAC
5.8.0049
data reduction
HKL-2000
data scaling
HKL-2000
Crystal structure of CYLD USP domain (C596S E674Q) in complex with Met1-linked diubiquitin
1
N
N
2
N
N
1
N
N
2
N
N
3
N
N
3
N
N
4
N
N
4
N
N
4
N
N
4
N
N
A
GLY
578
A
GLY
4
HELX_P
A
MET
582
A
MET
8
5
1
5
A
SER
595
A
SER
21
HELX_P
A
SER
607
A
SER
33
1
2
13
A
LEU
612
A
LEU
38
HELX_P
A
LEU
617
A
LEU
43
5
3
6
A
TYR
627
A
TYR
53
HELX_P
A
ILE
639
A
ILE
65
1
4
13
A
ILE
639
A
ILE
65
HELX_P
A
GLY
647
A
GLY
73
1
5
9
A
CYS
650
A
CYS
76
HELX_P
A
GLU
665
A
GLU
91
1
6
16
A
ASP
676
A
ASP
102
HELX_P
A
HIS
687
A
HIS
113
1
7
12
A
THR
724
A
THR
150
HELX_P
A
SER
736
A
SER
162
1
8
13
A
THR
773
A
THR
199
HELX_P
A
LEU
776
A
LEU
202
5
9
4
A
PRO
840
A
PRO
266
HELX_P
A
LEU
846
A
LEU
272
1
10
7
A
THR
849
A
THR
275
HELX_P
A
ALA
855
A
ALA
281
1
11
7
A
ASP
857
A
ASP
283
HELX_P
A
ILE
861
A
ILE
287
5
12
5
A
GLN
862
A
GLN
288
HELX_P
A
GLY
863
A
GLY
289
5
13
2
A
TYR
864
A
TYR
290
HELX_P
A
ASP
871
A
ASP
297
1
14
8
B
THR
22
B
THR
22
HELX_P
B
GLY
35
B
GLY
35
1
15
14
B
PRO
37
B
PRO
37
HELX_P
B
ASP
39
B
ASP
39
5
16
3
B
LEU
56
B
LEU
56
HELX_P
B
ASN
60
B
ASN
60
5
17
5
B
THR
98
B
THR
98
HELX_P
B
GLU
110
B
GLU
110
1
18
13
B
PRO
113
B
PRO
113
HELX_P
B
ASP
115
B
ASP
115
5
19
3
C
GLY
578
C
GLY
4
HELX_P
C
MET
582
C
MET
8
5
20
5
C
SER
595
C
SER
21
HELX_P
C
SER
607
C
SER
33
1
21
13
C
LEU
612
C
LEU
38
HELX_P
C
LEU
617
C
LEU
43
5
22
6
C
TYR
627
C
TYR
53
HELX_P
C
ILE
639
C
ILE
65
1
23
13
C
ILE
639
C
ILE
65
HELX_P
C
GLY
647
C
GLY
73
1
24
9
C
CYS
650
C
CYS
76
HELX_P
C
GLU
665
C
GLU
91
1
25
16
C
ASP
676
C
ASP
102
HELX_P
C
HIS
687
C
HIS
113
1
26
12
C
THR
724
C
THR
150
HELX_P
C
SER
736
C
SER
162
1
27
13
C
THR
773
C
THR
199
HELX_P
C
LEU
776
C
LEU
202
5
28
4
C
PRO
840
C
PRO
266
HELX_P
C
LEU
846
C
LEU
272
1
29
7
C
THR
849
C
THR
275
HELX_P
C
ALA
855
C
ALA
281
1
30
7
C
ASP
857
C
ASP
283
HELX_P
C
ILE
861
C
ILE
287
5
31
5
C
GLN
862
C
GLN
288
HELX_P
C
GLY
863
C
GLY
289
5
32
2
C
TYR
864
C
TYR
290
HELX_P
C
ASP
871
C
ASP
297
1
33
8
D
THR
22
D
THR
22
HELX_P
D
GLY
35
D
GLY
35
1
34
14
D
PRO
37
D
PRO
37
HELX_P
D
ASP
39
D
ASP
39
5
35
3
D
LEU
56
D
LEU
56
HELX_P
D
ASN
60
D
ASN
60
5
36
5
D
THR
98
D
THR
98
HELX_P
D
GLY
111
D
GLY
111
1
37
14
D
PRO
113
D
PRO
113
HELX_P
D
ASP
115
D
ASP
115
5
38
3
HYDROLASE/PROTEIN BINDING
ubiquitin protease, HYDROLASE-PROTEIN BINDING complex
A
C
B
D
A
GLY
578
A
GLY
4
A
LYS
886
A
LYS
312
0
C
GLY
578
C
GLY
4
C
LYS
886
C
LYS
312
0
B
MET
1
B
MET
1
B
ARG
148
B
ARG
148
0
D
MET
1
D
MET
1
D
ARG
148
D
ARG
148
0
E7FEV5_DANRE
UNP
1
578
E7FEV5
GLEVMVGKKKGIQGHYNSCYLDSTLFCLFSFSSVLDTVLLRPRSKTDVEYYKETQELLRTEIVNPLRIHGYVCATKIMKL
RRILEKVEAASGFTSEEKDPEEFLNILFHHILRVDPLLRLRSAGQKVQDCYFYQIFMDKKDKVMVPTSQQLLEWSFINSD
LKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLELDITDLLDDTP
E7FEV5_DANRE
UNP
1
850
E7FEV5
PHQQMELFAVLCIETSHYVAFVKYGSADSAWLFFDSMADRDGGQNGFNIPQVSRCPEVGEYLKMTPEELHALDPKNIQGY
ARRLLCDAYMCMYQSPTMSLYK
UBC_HUMAN
UNP
2
1
P0CG48
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF
VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
578
780
3WXF
578
780
E7FEV5
A
1
4
206
850
951
3WXF
785
886
E7FEV5
A
2
211
312
1
148
3WXF
1
148
P0CG48
B
3
1
148
578
780
3WXF
578
780
E7FEV5
C
1
4
206
850
951
3WXF
785
886
E7FEV5
C
2
211
312
1
148
3WXF
1
148
P0CG48
D
3
1
148
1
expression tag
SER
575
3WXF
A
E7FEV5
UNP
1
1
expression tag
HIS
576
3WXF
A
E7FEV5
UNP
2
1
expression tag
MET
577
3WXF
A
E7FEV5
UNP
3
1
CYS
engineered mutation
SER
596
3WXF
A
E7FEV5
UNP
596
22
1
GLU
engineered mutation
GLN
674
3WXF
A
E7FEV5
UNP
674
100
1
linker
LEU
781
3WXF
A
E7FEV5
UNP
207
1
linker
GLU
782
3WXF
A
E7FEV5
UNP
208
1
linker
GLY
783
3WXF
A
E7FEV5
UNP
209
1
linker
GLY
784
3WXF
A
E7FEV5
UNP
210
4
expression tag
SER
575
3WXF
C
E7FEV5
UNP
1
4
expression tag
HIS
576
3WXF
C
E7FEV5
UNP
2
4
expression tag
MET
577
3WXF
C
E7FEV5
UNP
3
4
CYS
engineered mutation
SER
596
3WXF
C
E7FEV5
UNP
596
22
4
GLU
engineered mutation
GLN
674
3WXF
C
E7FEV5
UNP
674
100
4
linker
LEU
781
3WXF
C
E7FEV5
UNP
207
4
linker
GLU
782
3WXF
C
E7FEV5
UNP
208
4
linker
GLY
783
3WXF
C
E7FEV5
UNP
209
4
linker
GLY
784
3WXF
C
E7FEV5
UNP
210
8
6
2
3
5
5
8
6
2
3
5
5
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
A
GLY
584
A
GLY
10
A
LYS
585
A
LYS
11
A
PHE
831
A
PHE
257
A
ARG
838
A
ARG
264
A
TRP
815
A
TRP
241
A
ASP
825
A
ASP
251
A
TYR
802
A
TYR
228
A
LYS
807
A
LYS
233
A
GLN
788
A
GLN
214
A
ILE
797
A
ILE
223
A
ALA
872
A
ALA
298
A
GLN
878
A
GLN
304
A
CYS
746
A
CYS
172
A
GLN
750
A
GLN
176
A
TYR
710
A
TYR
136
A
GLN
711
A
GLN
137
A
GLY
584
A
GLY
10
A
LYS
585
A
LYS
11
A
PHE
831
A
PHE
257
A
ARG
838
A
ARG
264
A
TRP
815
A
TRP
241
A
ASP
825
A
ASP
251
A
TYR
802
A
TYR
228
A
LYS
807
A
LYS
233
A
GLN
788
A
GLN
214
A
ILE
797
A
ILE
223
A
GLU
769
A
GLU
195
A
ASP
771
A
ASP
197
A
GLY
588
A
GLY
14
A
ILE
589
A
ILE
15
A
TYR
648
A
TYR
74
A
VAL
649
A
VAL
75
A
GLN
705
A
GLN
131
A
CYS
707
A
CYS
133
A
LEU
695
A
LEU
121
A
SER
699
A
SER
125
A
LEU
738
A
LEU
164
A
PHE
740
A
PHE
166
B
THR
12
B
THR
12
B
GLU
16
B
GLU
16
B
GLN
2
B
GLN
2
B
THR
7
B
THR
7
B
THR
66
B
THR
66
B
LEU
71
B
LEU
71
B
GLN
41
B
GLN
41
B
PHE
45
B
PHE
45
B
LYS
48
B
LYS
48
B
GLN
49
B
GLN
49
B
THR
88
B
THR
88
B
LEU
91
B
LEU
91
B
ILE
79
B
ILE
79
B
LYS
82
B
LYS
82
B
THR
142
B
THR
142
B
LEU
147
B
LEU
147
B
GLN
117
B
GLN
117
B
PHE
121
B
PHE
121
B
LYS
124
B
LYS
124
B
GLN
125
B
GLN
125
C
GLY
584
C
GLY
10
C
LYS
585
C
LYS
11
C
PHE
831
C
PHE
257
C
ARG
838
C
ARG
264
C
TRP
815
C
TRP
241
C
ASP
825
C
ASP
251
C
TYR
802
C
TYR
228
C
LYS
807
C
LYS
233
C
GLN
788
C
GLN
214
C
ILE
797
C
ILE
223
C
ALA
872
C
ALA
298
C
GLN
878
C
GLN
304
C
CYS
746
C
CYS
172
C
GLN
750
C
GLN
176
C
TYR
710
C
TYR
136
C
GLN
711
C
GLN
137
C
GLY
584
C
GLY
10
C
LYS
585
C
LYS
11
C
PHE
831
C
PHE
257
C
ARG
838
C
ARG
264
C
TRP
815
C
TRP
241
C
ASP
825
C
ASP
251
C
TYR
802
C
TYR
228
C
LYS
807
C
LYS
233
C
GLN
788
C
GLN
214
C
ILE
797
C
ILE
223
C
GLU
769
C
GLU
195
C
ASP
771
C
ASP
197
C
GLY
588
C
GLY
14
C
ILE
589
C
ILE
15
C
TYR
648
C
TYR
74
C
VAL
649
C
VAL
75
C
VAL
704
C
VAL
130
C
CYS
707
C
CYS
133
C
LEU
695
C
LEU
121
C
SER
699
C
SER
125
C
LEU
738
C
LEU
164
C
PHE
740
C
PHE
166
D
THR
12
D
THR
12
D
GLU
16
D
GLU
16
D
GLN
2
D
GLN
2
D
THR
7
D
THR
7
D
THR
66
D
THR
66
D
LEU
71
D
LEU
71
D
GLN
41
D
GLN
41
D
PHE
45
D
PHE
45
D
LYS
48
D
LYS
48
D
GLN
49
D
GLN
49
D
THR
88
D
THR
88
D
VAL
93
D
VAL
93
D
MET
77
D
MET
77
D
LYS
82
D
LYS
82
D
THR
142
D
THR
142
D
LEU
147
D
LEU
147
D
GLN
117
D
GLN
117
D
PHE
121
D
PHE
121
D
LYS
124
D
LYS
124
D
GLN
125
D
GLN
125
BINDING SITE FOR RESIDUE SO4 C 901
C
SO4
901
Software
6
BINDING SITE FOR RESIDUE SO4 C 902
C
SO4
902
Software
4
C
ARG
620
C
ARG
46
6
1_555
C
GLU
626
C
GLU
52
6
1_555
C
TYR
627
C
TYR
53
6
1_555
C
TYR
628
C
TYR
54
6
1_555
C
LYS
629
C
LYS
55
6
1_555
C
GLU
630
C
GLU
56
6
1_555
B
ARG
118
B
ARG
118
4
1_655
C
ALA
811
C
ALA
237
4
1_555
C
ASP
812
C
ASP
238
4
1_555
C
SER
813
C
SER
239
4
1_555
1
P 1