0.024624 0.000000 0.008803 -0.000000 0.017029 0.000000 0.000000 -0.000000 0.024537 0.00000 0.00000 0.00000 Suematsu, K. Ueda, T. Nakashima, T. Kakuta, Y. Kimura, M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 2 90.00 109.67 90.00 40.610 58.725 43.280 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C3 H8 O3 92.094 GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL non-polymer C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C N 79 N C N 80 N C N 81 N O N 82 N N N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N N N 95 S C N 96 N C N 97 N O N 98 N C N 99 N C N 100 N C N 101 N O N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N N N 114 N C N 115 N C N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N C N 124 N O N 125 N C N 126 N O N 127 N C N 128 N O N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N S N 237 N C N 238 N O N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N N N 251 S C N 252 N C N 253 N O N 254 N C Y 255 N C Y 256 N C Y 257 N C Y 258 N C Y 259 N C Y 260 N C N 261 N O N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N N N 274 S C N 275 N C N 276 N O N 277 N C N 278 N C N 279 N C N 280 N O N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 N C N 295 N O N 296 N O N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N N N 305 S C N 306 N C N 307 N O N 308 R C N 309 N O N 310 N C N 311 N O N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N N N 322 S C N 323 N C N 324 N O N 325 N C Y 326 N C Y 327 N C Y 328 N C Y 329 N N Y 330 N C Y 331 N C Y 332 N C Y 333 N C Y 334 N C N 335 N O N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N N N 349 S C N 350 N C N 351 N O N 352 N C Y 353 N C Y 354 N C Y 355 N C Y 356 N C Y 357 N C Y 358 N C N 359 N O N 360 N O N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N N N 373 S C N 374 N C N 375 N O N 376 N C N 377 N C N 378 N C N 379 N O N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing Y 248 N doub Y 249 N sing Y 250 N sing N 251 N sing Y 252 N doub N 253 N sing Y 254 N doub N 255 N sing Y 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N doub N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N doub N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N doub N 313 N sing N 314 N sing N 315 N sing N 316 N sing Y 317 N doub Y 318 N sing Y 319 N sing N 320 N sing Y 321 N doub Y 322 N sing Y 323 N sing N 324 N sing Y 325 N sing Y 326 N doub N 327 N sing Y 328 N doub N 329 N sing Y 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N doub N 341 N sing N 342 N sing N 343 N sing N 344 N sing Y 345 N doub Y 346 N sing Y 347 N sing N 348 N sing Y 349 N doub N 350 N sing Y 351 N doub N 352 N sing Y 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N doub N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing JA Biosci.Biotechnol.Biochem. BBBIEJ 2094 0916-8451 79 952 959 10.1080/09168451.2014.1003130 25704799 On archaeal homologs of the human RNase P proteins Pop5 and Rpp30 in the hyperthermophilic archaeon Thermococcus kodakarensis. 2015 10.2210/pdb3wyz/pdb pdb_00003wyz 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD RAYONIX MX300HE SINGLE WAVELENGTH M x-ray 1 0.9 1.0 BL44XU SPring-8 0.9 SYNCHROTRON SPRING-8 BEAMLINE BL44XU 25306.330 Ribonuclease P protein component 3 3.1.26.5 1 man polymer 92.094 GLYCEROL 1 syn non-polymer 18.015 water 39 nat water RNase P component 3, Rpp30 no no MSEEEVSFSRDYFVEMDVRDEEAHELASDWFDEVVFTKKLVLEDPPDWGSLKEELKELRGKYGKVALLLVTRKPSLIREV KSRNLKALLYVQGGDMRINRMAIESGVDALISPWFGRKDPGFDHTLAGMAARRGVAIGFSLSPLLNANPYGRAQILRFMM KTWQLVKKYRVPRFITSSAESRWEVRGPRDLMSLGINIGMEIPEARASLNFYPRTIVWKL MSEEEVSFSRDYFVEMDVRDEEAHELASDWFDEVVFTKKLVLEDPPDWGSLKEELKELRGKYGKVALLLVTRKPSLIREV KSRNLKALLYVQGGDMRINRMAIESGVDALISPWFGRKDPGFDHTLAGMAARRGVAIGFSLSPLLNANPYGRAQILRFMM KTWQLVKKYRVPRFITSSAESRWEVRGPRDLMSLGINIGMEIPEARASLNFYPRTIVWKL A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample rnp3, TK1450 69014 Thermococcus kodakarensis KOD1 562 Escherichia coli 1 1.92 35.95 Purification 7.5 50mM Tris-HCl (pH 7.5), 200mM NaCl, 10mM MgCl2, Purification, temperature 283K 283 software chem_comp_atom chem_comp_bond database_2 struct_site repository Initial release Refinement description Data collection Database references Derived calculations 1 0 2015-09-16 1 1 2017-11-22 1 2 2024-03-20 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id PDBJ Y PDBJ 2014-09-11 REL REL GOL GLYCEROL HOH water GOL 1 2 GOL GOL 301 A HOH 19 3 HOH HOH 401 A HOH 20 3 HOH HOH 402 A HOH 31 3 HOH HOH 403 A HOH 37 3 HOH HOH 404 A HOH 39 3 HOH HOH 405 A HOH 40 3 HOH HOH 406 A HOH 43 3 HOH HOH 407 A HOH 48 3 HOH HOH 408 A HOH 50 3 HOH HOH 409 A HOH 51 3 HOH HOH 410 A HOH 53 3 HOH HOH 411 A HOH 54 3 HOH HOH 412 A HOH 55 3 HOH HOH 413 A HOH 56 3 HOH HOH 414 A HOH 59 3 HOH HOH 415 A HOH 80 3 HOH HOH 416 A HOH 87 3 HOH HOH 417 A HOH 88 3 HOH HOH 418 A HOH 102 3 HOH HOH 419 A HOH 113 3 HOH HOH 420 A HOH 114 3 HOH HOH 421 A HOH 131 3 HOH HOH 422 A HOH 133 3 HOH HOH 423 A HOH 135 3 HOH HOH 424 A HOH 136 3 HOH HOH 425 A HOH 137 3 HOH HOH 426 A HOH 140 3 HOH HOH 427 A HOH 142 3 HOH HOH 428 A HOH 150 3 HOH HOH 429 A HOH 189 3 HOH HOH 430 A HOH 230 3 HOH HOH 431 A HOH 235 3 HOH HOH 432 A HOH 265 3 HOH HOH 433 A HOH 268 3 HOH HOH 434 A HOH 269 3 HOH HOH 435 A HOH 272 3 HOH HOH 436 A HOH 273 3 HOH HOH 437 A HOH 288 3 HOH HOH 438 A HOH 289 3 HOH HOH 439 A n 1 1 A n 2 2 A n 3 3 A n 4 4 A n 5 5 A n 6 6 A n 7 7 A PHE 8 n 8 PHE 8 A SER 9 n 9 SER 9 A ARG 10 n 10 ARG 10 A ASP 11 n 11 ASP 11 A TYR 12 n 12 TYR 12 A PHE 13 n 13 PHE 13 A VAL 14 n 14 VAL 14 A GLU 15 n 15 GLU 15 A MET 16 n 16 MET 16 A ASP 17 n 17 ASP 17 A VAL 18 n 18 VAL 18 A ARG 19 n 19 ARG 19 A ASP 20 n 20 ASP 20 A GLU 21 n 21 GLU 21 A GLU 22 n 22 GLU 22 A ALA 23 n 23 ALA 23 A HIS 24 n 24 HIS 24 A GLU 25 n 25 GLU 25 A LEU 26 n 26 LEU 26 A ALA 27 n 27 ALA 27 A SER 28 n 28 SER 28 A ASP 29 n 29 ASP 29 A TRP 30 n 30 TRP 30 A PHE 31 n 31 PHE 31 A ASP 32 n 32 ASP 32 A GLU 33 n 33 GLU 33 A VAL 34 n 34 VAL 34 A VAL 35 n 35 VAL 35 A PHE 36 n 36 PHE 36 A THR 37 n 37 THR 37 A LYS 38 n 38 LYS 38 A LYS 39 n 39 LYS 39 A LEU 40 n 40 LEU 40 A VAL 41 n 41 VAL 41 A LEU 42 n 42 LEU 42 A GLU 43 n 43 GLU 43 A ASP 44 n 44 ASP 44 A PRO 45 n 45 PRO 45 A PRO 46 n 46 PRO 46 A ASP 47 n 47 ASP 47 A TRP 48 n 48 TRP 48 A GLY 49 n 49 GLY 49 A SER 50 n 50 SER 50 A LEU 51 n 51 LEU 51 A LYS 52 n 52 LYS 52 A GLU 53 n 53 GLU 53 A GLU 54 n 54 GLU 54 A LEU 55 n 55 LEU 55 A LYS 56 n 56 LYS 56 A GLU 57 n 57 GLU 57 A LEU 58 n 58 LEU 58 A ARG 59 n 59 ARG 59 A GLY 60 n 60 GLY 60 A LYS 61 n 61 LYS 61 A TYR 62 n 62 TYR 62 A GLY 63 n 63 GLY 63 A LYS 64 n 64 LYS 64 A VAL 65 n 65 VAL 65 A ALA 66 n 66 ALA 66 A LEU 67 n 67 LEU 67 A LEU 68 n 68 LEU 68 A LEU 69 n 69 LEU 69 A VAL 70 n 70 VAL 70 A THR 71 n 71 THR 71 A ARG 72 n 72 ARG 72 A LYS 73 n 73 LYS 73 A PRO 74 n 74 PRO 74 A SER 75 n 75 SER 75 A LEU 76 n 76 LEU 76 A ILE 77 n 77 ILE 77 A ARG 78 n 78 ARG 78 A GLU 79 n 79 GLU 79 A VAL 80 n 80 VAL 80 A LYS 81 n 81 LYS 81 A SER 82 n 82 SER 82 A ARG 83 n 83 ARG 83 A ASN 84 n 84 ASN 84 A LEU 85 n 85 LEU 85 A LYS 86 n 86 LYS 86 A ALA 87 n 87 ALA 87 A LEU 88 n 88 LEU 88 A LEU 89 n 89 LEU 89 A TYR 90 n 90 TYR 90 A VAL 91 n 91 VAL 91 A GLN 92 n 92 GLN 92 A GLY 93 n 93 GLY 93 A GLY 94 n 94 GLY 94 A ASP 95 n 95 ASP 95 A MET 96 n 96 MET 96 A ARG 97 n 97 ARG 97 A ILE 98 n 98 ILE 98 A ASN 99 n 99 ASN 99 A ARG 100 n 100 ARG 100 A MET 101 n 101 MET 101 A ALA 102 n 102 ALA 102 A ILE 103 n 103 ILE 103 A GLU 104 n 104 GLU 104 A SER 105 n 105 SER 105 A GLY 106 n 106 GLY 106 A VAL 107 n 107 VAL 107 A ASP 108 n 108 ASP 108 A ALA 109 n 109 ALA 109 A LEU 110 n 110 LEU 110 A ILE 111 n 111 ILE 111 A SER 112 n 112 SER 112 A PRO 113 n 113 PRO 113 A TRP 114 n 114 TRP 114 A PHE 115 n 115 PHE 115 A GLY 116 n 116 GLY 116 A ARG 117 n 117 ARG 117 A LYS 118 n 118 LYS 118 A ASP 119 n 119 ASP 119 A PRO 120 n 120 PRO 120 A GLY 121 n 121 GLY 121 A PHE 122 n 122 PHE 122 A ASP 123 n 123 ASP 123 A HIS 124 n 124 HIS 124 A THR 125 n 125 THR 125 A LEU 126 n 126 LEU 126 A ALA 127 n 127 ALA 127 A GLY 128 n 128 GLY 128 A MET 129 n 129 MET 129 A ALA 130 n 130 ALA 130 A ALA 131 n 131 ALA 131 A ARG 132 n 132 ARG 132 A ARG 133 n 133 ARG 133 A GLY 134 n 134 GLY 134 A VAL 135 n 135 VAL 135 A ALA 136 n 136 ALA 136 A ILE 137 n 137 ILE 137 A GLY 138 n 138 GLY 138 A PHE 139 n 139 PHE 139 A SER 140 n 140 SER 140 A LEU 141 n 141 LEU 141 A SER 142 n 142 SER 142 A PRO 143 n 143 PRO 143 A LEU 144 n 144 LEU 144 A LEU 145 n 145 LEU 145 A ASN 146 n 146 ASN 146 A ALA 147 n 147 ALA 147 A ASN 148 n 148 ASN 148 A PRO 149 n 149 PRO 149 A TYR 150 n 150 TYR 150 A GLY 151 n 151 GLY 151 A ARG 152 n 152 ARG 152 A ALA 153 n 153 ALA 153 A GLN 154 n 154 GLN 154 A ILE 155 n 155 ILE 155 A LEU 156 n 156 LEU 156 A ARG 157 n 157 ARG 157 A PHE 158 n 158 PHE 158 A MET 159 n 159 MET 159 A MET 160 n 160 MET 160 A LYS 161 n 161 LYS 161 A THR 162 n 162 THR 162 A TRP 163 n 163 TRP 163 A GLN 164 n 164 GLN 164 A LEU 165 n 165 LEU 165 A VAL 166 n 166 VAL 166 A LYS 167 n 167 LYS 167 A LYS 168 n 168 LYS 168 A TYR 169 n 169 TYR 169 A ARG 170 n 170 ARG 170 A VAL 171 n 171 VAL 171 A PRO 172 n 172 PRO 172 A ARG 173 n 173 ARG 173 A PHE 174 n 174 PHE 174 A ILE 175 n 175 ILE 175 A THR 176 n 176 THR 176 A SER 177 n 177 SER 177 A SER 178 n 178 SER 178 A ALA 179 n 179 ALA 179 A GLU 180 n 180 GLU 180 A SER 181 n 181 SER 181 A ARG 182 n 182 ARG 182 A TRP 183 n 183 TRP 183 A GLU 184 n 184 GLU 184 A VAL 185 n 185 VAL 185 A ARG 186 n 186 ARG 186 A GLY 187 n 187 GLY 187 A PRO 188 n 188 PRO 188 A ARG 189 n 189 ARG 189 A ASP 190 n 190 ASP 190 A LEU 191 n 191 LEU 191 A MET 192 n 192 MET 192 A SER 193 n 193 SER 193 A LEU 194 n 194 LEU 194 A GLY 195 n 195 GLY 195 A ILE 196 n 196 ILE 196 A ASN 197 n 197 ASN 197 A ILE 198 n 198 ILE 198 A GLY 199 n 199 GLY 199 A MET 200 n 200 MET 200 A GLU 201 n 201 GLU 201 A ILE 202 n 202 ILE 202 A PRO 203 n 203 PRO 203 A GLU 204 n 204 GLU 204 A ALA 205 n 205 ALA 205 A ARG 206 n 206 ARG 206 A ALA 207 n 207 ALA 207 A SER 208 n 208 SER 208 A LEU 209 n 209 LEU 209 A ASN 210 n 210 ASN 210 A PHE 211 n 211 PHE 211 A TYR 212 n 212 TYR 212 A PRO 213 n 213 PRO 213 A ARG 214 n 214 ARG 214 A THR 215 n 215 THR 215 A ILE 216 n 216 ILE 216 A VAL 217 n 217 VAL 217 A TRP 218 n 218 TRP 218 A LYS 219 n 219 LYS 219 A n 220 220 A author_and_software_defined_assembly PISA 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N VAL 18 A N VAL 18 A O THR 37 A O THR 37 A N LEU 40 A N LEU 40 A O LEU 68 A O LEU 68 A N LEU 67 A N LEU 67 A O LEU 88 A O LEU 88 A N VAL 91 A N VAL 91 A O ILE 111 A O ILE 111 A N LEU 110 A N LEU 110 A O GLY 138 A O GLY 138 A N PHE 139 A N PHE 139 A O PHE 174 A O PHE 174 1 A MET 1 A MET 1 1 Y 1 A SER 2 A SER 2 1 Y 1 A GLU 3 A GLU 3 1 Y 1 A GLU 4 A GLU 4 1 Y 1 A GLU 5 A GLU 5 1 Y 1 A VAL 6 A VAL 6 1 Y 1 A SER 7 A SER 7 1 Y 1 A LEU 220 A LEU 220 1 Y 1 A ASP 11 -104.70 55.26 1 A GLU 43 -159.65 76.12 1 A ASP 44 -123.17 -105.64 1 A ASP 47 78.99 31.02 1 A ASN 84 55.66 72.61 1 A SER 112 49.60 74.46 1 A ASN 146 -100.46 46.98 1 A ASN 210 -115.78 -75.91 56.060 -0.01 -0.00 0.04 -0.04 -0.00 0.02 0.953 0.925 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.28136 0.21901 0.22191 0.22191 2.21 33.48 431 8799 8799 4.7 94.63 10.894 0.262 RANDOM 1 THROUGHOUT 0.0 0.0 MOLECULAR REPLACEMENT 0.510 0.288 0.80 0.80 1.20 MAXIMUM LIKELIHOOD MASK 2.21 33.48 39 1762 6 0 1717 0.005 0.019 1775 0.001 0.020 1747 0.939 1.972 2394 0.686 3.000 4012 5.043 5.000 215 30.083 22.099 81 14.138 15.000 326 13.973 15.000 20 0.050 0.200 255 0.004 0.021 1960 0.001 0.020 420 1.971 5.355 851 1.971 5.354 850 3.268 8.024 1063 3.267 8.025 1064 2.222 5.802 924 2.222 5.802 924 3.700 8.554 1330 7.223 50.702 7366 7.223 50.698 7365 0.235 0.332 2.263 25 580 20 83.45 2.2 50.0 3WYZ 9422 9422 0.0 0.0 0.141 1 18.4 3.2 96.8 0.917 2.2 2.3 2.7 1 3.0 93.5 phasing MOLREP refinement REFMAC 5.8.0049 data reduction HKL-2000 data scaling HKL-2000 On archaeal homologs of the human RNase P protein Rpp30 in the hyperthermophilic archaeon Thermococcus kodakarensis 1 N N 2 N N 3 N N A ASP 20 A ASP 20 HELX_P A PHE 31 A PHE 31 1 1 12 A ASP 47 A ASP 47 HELX_P A GLY 63 A GLY 63 1 2 17 A LYS 73 A LYS 73 HELX_P A ASN 84 A ASN 84 1 3 12 A ASP 95 A ASP 95 HELX_P A SER 105 A SER 105 1 4 11 A ASP 123 A ASP 123 HELX_P A GLY 134 A GLY 134 1 5 12 A LEU 141 A LEU 141 HELX_P A ASN 146 A ASN 146 1 6 6 A ASN 148 A ASN 148 HELX_P A TYR 169 A TYR 169 1 7 22 A SER 181 A SER 181 HELX_P A VAL 185 A VAL 185 5 8 5 A GLY 187 A GLY 187 HELX_P A GLY 199 A GLY 199 1 9 13 A GLU 201 A GLU 201 HELX_P A ASN 210 A ASN 210 1 10 10 A ASN 210 A ASN 210 HELX_P A TRP 218 A TRP 218 1 11 9 HYDROLASE TIM barrel-like structure, pre-tRNA cleavage, RNA binding, HYDROLASE A GLU 43 A GLU 43 1 A ASP 44 A ASP 44 3.75 A PRO 46 A PRO 46 1 A ASP 47 A ASP 47 9.11 RNP3_THEKO UNP 1 1 Q5JH47 MSEEEVSFSRDYFVEMDVRDEEAHELASDWFDEVVFTKKLVLEDPPDWGSLKEELKELRGKYGKVALLLVTRKPSLIREV KSRNLKALLYVQGGDMRINRMAIESGVDALISPWFGRKDPGFDHTLAGMAARRGVAIGFSLSPLLNANPYGRAQILRFMM KTWQLVKKYRVPRFITSSAESRWEVRGPRDLMSLGINIGMEIPEARASLNFYPRTIVWKL 1 220 3WYZ 1 220 Q5JH47 A 1 1 220 7 parallel parallel parallel parallel parallel parallel A VAL 14 A VAL 14 A VAL 18 A VAL 18 A GLU 33 A GLU 33 A VAL 41 A VAL 41 A VAL 65 A VAL 65 A VAL 70 A VAL 70 A LEU 88 A LEU 88 A GLN 92 A GLN 92 A ALA 109 A ALA 109 A ILE 111 A ILE 111 A ALA 136 A ALA 136 A SER 140 A SER 140 A ARG 173 A ARG 173 A THR 176 A THR 176 BINDING SITE FOR RESIDUE GOL A 301 A GOL 301 Software 8 A ARG 19 A ARG 19 8 1_555 A GLN 92 A GLN 92 8 1_555 A ILE 111 A ILE 111 8 1_555 A SER 112 A SER 112 8 1_555 A SER 140 A SER 140 8 1_555 A SER 142 A SER 142 8 1_555 A SER 178 A SER 178 8 1_555 A HOH 402 C HOH 8 1_555 4 P 1 21 1