0.019331
0.000000
0.000000
0.000000
0.014280
0.000000
0.000000
0.000000
0.010460
0.00000
0.00000
0.00000
Zacharchenko, T.
Elliott, P.R.
Goult, B.T.
Bate, N.
Critchely, D.R.
Barsukov, I.L.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
51.730
70.030
95.600
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
R
C
N
309
N
O
N
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
N
Y
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
N
359
N
O
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
N
N
373
S
C
N
374
N
C
N
375
N
O
N
376
N
C
N
377
N
C
N
378
N
C
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
Y
345
N
doub
Y
346
N
sing
Y
347
N
sing
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
288
8238
10.1074/JBC.M112.438119
23389036
Riam and Vinculin Binding to Talin are Mutually Exclusive and Regulate Adhesion Assembly and Turnover.
2013
10.2210/pdb3zdl/pdb
pdb_00003zdl
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
PIXEL
2011-10-07
DECTRIS PILATUS 6M
ACCEL FIXED EXIT DOUBLE CRYSTAL
SINGLE WAVELENGTH
M
x-ray
1
0.9778
1.0
I24
Diamond
0.9778
SYNCHROTRON
DIAMOND BEAMLINE I24
31327.104
VINCULIN
VD1 DOMAIN, RESIDUES 1-259
1
man
polymer
3539.914
AMYLOID BETA A4 PRECURSOR PROTEIN-BINDING FAMILY B MEMBER 1-INTERACTING PROTEIN
N TERMINAL DOMAIN, RESIUDES 1-32
YES
1
syn
polymer
18.015
water
57
nat
water
METAVINCULIN
APBB1-INTERACTING PROTEIN 1, PROLINE-RICH EVH1 LIGAND 1, PREL-1, PROLINE-RICH PROTEIN 73, RAP1-GTP-INTERACTING ADAPTER MOLECULE, RIAM, RETINOIC ACID-RESPONSIVE PROLINE-RICH PROTEIN 1, RARP-1
no
no
MGSSHHHHHHSSGLVPRGSHMMPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVSAVQAAVSNLVRVGK
ETVQTTEDQILKRDMPPAFIKVENACTKLVRAAQMLQADPYSVPARDYLIDGSRGILSGTSDLLLTFDEAEVRKIIRVCK
GILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNTK
SQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWA
MGSSHHHHHHSSGLVPRGSHMMPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVSAVQAAVSNLVRVGK
ETVQTTEDQILKRDMPPAFIKVENACTKLVRAAQMLQADPYSVPARDYLIDGSRGILSGTSDLLLTFDEAEVRKIIRVCK
GILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNTK
SQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWA
A
polypeptide(L)
no
no
MGESSEDIDQMFSTLLGEMDLLTQSLGVDTLY
MGESSEDIDQMFSTLLGEMDLLTQSLGVDTLY
B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
CHICKEN
sample
9031
GALLUS GALLUS
469008
ESCHERICHIA COLI
BL21(DE3)
PET15B
PLASMID
1
2.79
55.96
NONE
1.2M AMMONIUM SULPHATE, 0.05M TRI-SODIUM CITRATE, 3% ISOPROPANOL
chem_comp_atom
chem_comp_bond
database_2
pdbx_database_status
pdbx_initial_refinement_model
repository
Initial release
Database references
Derived calculations
Other
Derived calculations
Other
Database references
Data collection
Database references
Other
Refinement description
1
0
2013-02-13
1
1
2013-02-20
1
2
2013-03-06
1
3
2013-04-10
1
4
2013-04-17
1
5
2023-12-20
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.status_code_sf
PDBE
Y
PDBE
2012-11-28
REL
REL
HOH
water
9606
HUMAN
HOMO SAPIENS
sample
C TERMINAL TYROSINE NON NATIVE
1XWJ
PDB ENTRY 1XWJ
PDB
experimental model
HOH
2001
3
HOH
HOH
2001
A
HOH
2002
3
HOH
HOH
2002
A
HOH
2003
3
HOH
HOH
2003
A
HOH
2004
3
HOH
HOH
2004
A
HOH
2005
3
HOH
HOH
2005
A
HOH
2006
3
HOH
HOH
2006
A
HOH
2007
3
HOH
HOH
2007
A
HOH
2008
3
HOH
HOH
2008
A
HOH
2009
3
HOH
HOH
2009
A
HOH
2010
3
HOH
HOH
2010
A
HOH
2011
3
HOH
HOH
2011
A
HOH
2012
3
HOH
HOH
2012
A
HOH
2013
3
HOH
HOH
2013
A
HOH
2014
3
HOH
HOH
2014
A
HOH
2015
3
HOH
HOH
2015
A
HOH
2016
3
HOH
HOH
2016
A
HOH
2017
3
HOH
HOH
2017
A
HOH
2018
3
HOH
HOH
2018
A
HOH
2019
3
HOH
HOH
2019
A
HOH
2020
3
HOH
HOH
2020
A
HOH
2021
3
HOH
HOH
2021
A
HOH
2022
3
HOH
HOH
2022
A
HOH
2023
3
HOH
HOH
2023
A
HOH
2024
3
HOH
HOH
2024
A
HOH
2025
3
HOH
HOH
2025
A
HOH
2026
3
HOH
HOH
2026
A
HOH
2027
3
HOH
HOH
2027
A
HOH
2028
3
HOH
HOH
2028
A
HOH
2029
3
HOH
HOH
2029
A
HOH
2030
3
HOH
HOH
2030
A
HOH
2031
3
HOH
HOH
2031
A
HOH
2032
3
HOH
HOH
2032
A
HOH
2033
3
HOH
HOH
2033
A
HOH
2034
3
HOH
HOH
2034
A
HOH
2035
3
HOH
HOH
2035
A
HOH
2036
3
HOH
HOH
2036
A
HOH
2037
3
HOH
HOH
2037
A
HOH
2038
3
HOH
HOH
2038
A
HOH
2039
3
HOH
HOH
2039
A
HOH
2040
3
HOH
HOH
2040
A
HOH
2041
3
HOH
HOH
2041
A
HOH
2042
3
HOH
HOH
2042
A
HOH
2043
3
HOH
HOH
2043
A
HOH
2044
3
HOH
HOH
2044
A
HOH
2045
3
HOH
HOH
2045
A
HOH
2046
3
HOH
HOH
2046
A
HOH
2047
3
HOH
HOH
2047
A
HOH
2048
3
HOH
HOH
2048
A
HOH
2049
3
HOH
HOH
2049
A
HOH
2050
3
HOH
HOH
2050
A
HOH
2051
3
HOH
HOH
2051
A
HOH
2052
3
HOH
HOH
2052
A
HOH
2053
3
HOH
HOH
2053
A
HOH
2054
3
HOH
HOH
2054
A
HOH
2055
3
HOH
HOH
2055
A
HOH
2056
3
HOH
HOH
2056
A
HOH
2001
3
HOH
HOH
2001
B
n
1
-21
A
n
2
-20
A
n
3
-19
A
n
4
-18
A
n
5
-17
A
n
6
-16
A
n
7
-15
A
n
8
-14
A
n
9
-13
A
n
10
-12
A
n
11
-11
A
n
12
-10
A
n
13
-9
A
n
14
-8
A
n
15
-7
A
n
16
-6
A
n
17
-5
A
n
18
-4
A
n
19
-3
A
n
20
-2
A
n
21
-1
A
MET
0
n
22
MET
0
A
PRO
1
n
23
PRO
1
A
VAL
2
n
24
VAL
2
A
PHE
3
n
25
PHE
3
A
HIS
4
n
26
HIS
4
A
THR
5
n
27
THR
5
A
ARG
6
n
28
ARG
6
A
THR
7
n
29
THR
7
A
ILE
8
n
30
ILE
8
A
GLU
9
n
31
GLU
9
A
SER
10
n
32
SER
10
A
ILE
11
n
33
ILE
11
A
LEU
12
n
34
LEU
12
A
GLU
13
n
35
GLU
13
A
PRO
14
n
36
PRO
14
A
VAL
15
n
37
VAL
15
A
ALA
16
n
38
ALA
16
A
GLN
17
n
39
GLN
17
A
GLN
18
n
40
GLN
18
A
ILE
19
n
41
ILE
19
A
SER
20
n
42
SER
20
A
HIS
21
n
43
HIS
21
A
LEU
22
n
44
LEU
22
A
VAL
23
n
45
VAL
23
A
ILE
24
n
46
ILE
24
A
MET
25
n
47
MET
25
A
HIS
26
n
48
HIS
26
A
GLU
27
n
49
GLU
27
A
GLU
28
n
50
GLU
28
A
GLY
29
n
51
GLY
29
A
GLU
30
n
52
GLU
30
A
VAL
31
n
53
VAL
31
A
ASP
32
n
54
ASP
32
A
GLY
33
n
55
GLY
33
A
LYS
34
n
56
LYS
34
A
ALA
35
n
57
ALA
35
A
ILE
36
n
58
ILE
36
A
PRO
37
n
59
PRO
37
A
ASP
38
n
60
ASP
38
A
LEU
39
n
61
LEU
39
A
THR
40
n
62
THR
40
A
ALA
41
n
63
ALA
41
A
PRO
42
n
64
PRO
42
A
VAL
43
n
65
VAL
43
A
SER
44
n
66
SER
44
A
ALA
45
n
67
ALA
45
A
VAL
46
n
68
VAL
46
A
GLN
47
n
69
GLN
47
A
ALA
48
n
70
ALA
48
A
ALA
49
n
71
ALA
49
A
VAL
50
n
72
VAL
50
A
SER
51
n
73
SER
51
A
ASN
52
n
74
ASN
52
A
LEU
53
n
75
LEU
53
A
VAL
54
n
76
VAL
54
A
ARG
55
n
77
ARG
55
A
VAL
56
n
78
VAL
56
A
GLY
57
n
79
GLY
57
A
LYS
58
n
80
LYS
58
A
GLU
59
n
81
GLU
59
A
THR
60
n
82
THR
60
A
VAL
61
n
83
VAL
61
A
GLN
62
n
84
GLN
62
A
THR
63
n
85
THR
63
A
THR
64
n
86
THR
64
A
GLU
65
n
87
GLU
65
A
ASP
66
n
88
ASP
66
A
GLN
67
n
89
GLN
67
A
ILE
68
n
90
ILE
68
A
LEU
69
n
91
LEU
69
A
LYS
70
n
92
LYS
70
A
ARG
71
n
93
ARG
71
A
ASP
72
n
94
ASP
72
A
MET
73
n
95
MET
73
A
PRO
74
n
96
PRO
74
A
PRO
75
n
97
PRO
75
A
ALA
76
n
98
ALA
76
A
PHE
77
n
99
PHE
77
A
ILE
78
n
100
ILE
78
A
LYS
79
n
101
LYS
79
A
VAL
80
n
102
VAL
80
A
GLU
81
n
103
GLU
81
A
ASN
82
n
104
ASN
82
A
ALA
83
n
105
ALA
83
A
CYS
84
n
106
CYS
84
A
THR
85
n
107
THR
85
A
LYS
86
n
108
LYS
86
A
LEU
87
n
109
LEU
87
A
VAL
88
n
110
VAL
88
A
ARG
89
n
111
ARG
89
A
ALA
90
n
112
ALA
90
A
ALA
91
n
113
ALA
91
A
GLN
92
n
114
GLN
92
A
MET
93
n
115
MET
93
A
LEU
94
n
116
LEU
94
A
GLN
95
n
117
GLN
95
A
ALA
96
n
118
ALA
96
A
ASP
97
n
119
ASP
97
A
PRO
98
n
120
PRO
98
A
TYR
99
n
121
TYR
99
A
SER
100
n
122
SER
100
A
VAL
101
n
123
VAL
101
A
PRO
102
n
124
PRO
102
A
ALA
103
n
125
ALA
103
A
ARG
104
n
126
ARG
104
A
ASP
105
n
127
ASP
105
A
TYR
106
n
128
TYR
106
A
LEU
107
n
129
LEU
107
A
ILE
108
n
130
ILE
108
A
ASP
109
n
131
ASP
109
A
GLY
110
n
132
GLY
110
A
SER
111
n
133
SER
111
A
ARG
112
n
134
ARG
112
A
GLY
113
n
135
GLY
113
A
ILE
114
n
136
ILE
114
A
LEU
115
n
137
LEU
115
A
SER
116
n
138
SER
116
A
GLY
117
n
139
GLY
117
A
THR
118
n
140
THR
118
A
SER
119
n
141
SER
119
A
ASP
120
n
142
ASP
120
A
LEU
121
n
143
LEU
121
A
LEU
122
n
144
LEU
122
A
LEU
123
n
145
LEU
123
A
THR
124
n
146
THR
124
A
PHE
125
n
147
PHE
125
A
ASP
126
n
148
ASP
126
A
GLU
127
n
149
GLU
127
A
ALA
128
n
150
ALA
128
A
GLU
129
n
151
GLU
129
A
VAL
130
n
152
VAL
130
A
ARG
131
n
153
ARG
131
A
LYS
132
n
154
LYS
132
A
ILE
133
n
155
ILE
133
A
ILE
134
n
156
ILE
134
A
ARG
135
n
157
ARG
135
A
VAL
136
n
158
VAL
136
A
CYS
137
n
159
CYS
137
A
LYS
138
n
160
LYS
138
A
GLY
139
n
161
GLY
139
A
ILE
140
n
162
ILE
140
A
LEU
141
n
163
LEU
141
A
GLU
142
n
164
GLU
142
A
TYR
143
n
165
TYR
143
A
LEU
144
n
166
LEU
144
A
THR
145
n
167
THR
145
A
VAL
146
n
168
VAL
146
A
ALA
147
n
169
ALA
147
A
GLU
148
n
170
GLU
148
A
VAL
149
n
171
VAL
149
A
VAL
150
n
172
VAL
150
A
GLU
151
n
173
GLU
151
A
THR
152
n
174
THR
152
A
MET
153
n
175
MET
153
A
GLU
154
n
176
GLU
154
A
ASP
155
n
177
ASP
155
A
LEU
156
n
178
LEU
156
A
VAL
157
n
179
VAL
157
A
THR
158
n
180
THR
158
A
TYR
159
n
181
TYR
159
A
THR
160
n
182
THR
160
A
LYS
161
n
183
LYS
161
A
ASN
162
n
184
ASN
162
A
LEU
163
n
185
LEU
163
A
GLY
164
n
186
GLY
164
A
PRO
165
n
187
PRO
165
A
GLY
166
n
188
GLY
166
A
MET
167
n
189
MET
167
A
THR
168
n
190
THR
168
A
LYS
169
n
191
LYS
169
A
MET
170
n
192
MET
170
A
ALA
171
n
193
ALA
171
A
LYS
172
n
194
LYS
172
A
MET
173
n
195
MET
173
A
ILE
174
n
196
ILE
174
A
ASP
175
n
197
ASP
175
A
GLU
176
n
198
GLU
176
A
ARG
177
n
199
ARG
177
A
GLN
178
n
200
GLN
178
A
GLN
179
n
201
GLN
179
A
GLU
180
n
202
GLU
180
A
LEU
181
n
203
LEU
181
A
THR
182
n
204
THR
182
A
HIS
183
n
205
HIS
183
A
GLN
184
n
206
GLN
184
A
GLU
185
n
207
GLU
185
A
HIS
186
n
208
HIS
186
A
ARG
187
n
209
ARG
187
A
VAL
188
n
210
VAL
188
A
MET
189
n
211
MET
189
A
LEU
190
n
212
LEU
190
A
VAL
191
n
213
VAL
191
A
ASN
192
n
214
ASN
192
A
SER
193
n
215
SER
193
A
MET
194
n
216
MET
194
A
ASN
195
n
217
ASN
195
A
THR
196
n
218
THR
196
A
VAL
197
n
219
VAL
197
A
LYS
198
n
220
LYS
198
A
GLU
199
n
221
GLU
199
A
LEU
200
n
222
LEU
200
A
LEU
201
n
223
LEU
201
A
PRO
202
n
224
PRO
202
A
VAL
203
n
225
VAL
203
A
LEU
204
n
226
LEU
204
A
ILE
205
n
227
ILE
205
A
SER
206
n
228
SER
206
A
ALA
207
n
229
ALA
207
A
MET
208
n
230
MET
208
A
LYS
209
n
231
LYS
209
A
ILE
210
n
232
ILE
210
A
PHE
211
n
233
PHE
211
A
VAL
212
n
234
VAL
212
A
THR
213
n
235
THR
213
A
THR
214
n
236
THR
214
A
LYS
215
n
237
LYS
215
A
ASN
216
n
238
ASN
216
A
THR
217
n
239
THR
217
A
LYS
218
n
240
LYS
218
A
SER
219
n
241
SER
219
A
GLN
220
n
242
GLN
220
A
GLY
221
n
243
GLY
221
A
ILE
222
n
244
ILE
222
A
GLU
223
n
245
GLU
223
A
GLU
224
n
246
GLU
224
A
ALA
225
n
247
ALA
225
A
LEU
226
n
248
LEU
226
A
LYS
227
n
249
LYS
227
A
ASN
228
n
250
ASN
228
A
ARG
229
n
251
ARG
229
A
ASN
230
n
252
ASN
230
A
PHE
231
n
253
PHE
231
A
THR
232
n
254
THR
232
A
VAL
233
n
255
VAL
233
A
GLU
234
n
256
GLU
234
A
LYS
235
n
257
LYS
235
A
MET
236
n
258
MET
236
A
SER
237
n
259
SER
237
A
ALA
238
n
260
ALA
238
A
GLU
239
n
261
GLU
239
A
ILE
240
n
262
ILE
240
A
ASN
241
n
263
ASN
241
A
GLU
242
n
264
GLU
242
A
ILE
243
n
265
ILE
243
A
ILE
244
n
266
ILE
244
A
ARG
245
n
267
ARG
245
A
VAL
246
n
268
VAL
246
A
LEU
247
n
269
LEU
247
A
GLN
248
n
270
GLN
248
A
LEU
249
n
271
LEU
249
A
THR
250
n
272
THR
250
A
SER
251
n
273
SER
251
A
TRP
252
n
274
TRP
252
A
ASP
253
n
275
ASP
253
A
GLU
254
n
276
GLU
254
A
ASP
255
n
277
ASP
255
A
n
278
256
A
n
279
257
A
n
280
258
A
n
1
1
B
n
2
2
B
n
3
3
B
n
4
4
B
n
5
5
B
n
6
6
B
ASP
7
n
7
ASP
7
B
ILE
8
n
8
ILE
8
B
ASP
9
n
9
ASP
9
B
GLN
10
n
10
GLN
10
B
MET
11
n
11
MET
11
B
PHE
12
n
12
PHE
12
B
SER
13
n
13
SER
13
B
THR
14
n
14
THR
14
B
LEU
15
n
15
LEU
15
B
LEU
16
n
16
LEU
16
B
GLY
17
n
17
GLY
17
B
GLU
18
n
18
GLU
18
B
MET
19
n
19
MET
19
B
ASP
20
n
20
ASP
20
B
LEU
21
n
21
LEU
21
B
LEU
22
n
22
LEU
22
B
THR
23
n
23
THR
23
B
GLN
24
n
24
GLN
24
B
SER
25
n
25
SER
25
B
LEU
26
n
26
LEU
26
B
GLY
27
n
27
GLY
27
B
VAL
28
n
28
VAL
28
B
ASP
29
n
29
ASP
29
B
THR
30
n
30
THR
30
B
LEU
31
n
31
LEU
31
B
TYR
32
n
32
TYR
32
B
0.7701
-0.5335
1.1664
0.6440
-0.6836
1.0889
0.0898
0.1576
-0.0243
-0.1971
-0.0721
-0.0355
0.0506
0.0742
0.0112
0.1189
0.0212
0.0176
0.1473
0.0381
0.1037
refined
-11.0375
-13.6938
23.4492
X-RAY DIFFRACTION
1.0156
0.3822
-0.4105
2.2228
-0.8601
3.5701
0.0662
-0.0446
-0.0838
0.0424
0.2203
0.0795
0.2479
-0.4066
0.0889
0.3363
-0.0166
-0.1659
0.2054
0.0275
0.7093
refined
-11.5667
-27.7400
43.7533
X-RAY DIFFRACTION
X-RAY DIFFRACTION
1
(CHAIN A AND RESID 1:256)
X-RAY DIFFRACTION
2
(CHAIN B AND RESID 7:32)
author_and_software_defined_assembly
PISA
2
dimeric
2280
-27.8
14660
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
MET
-21
A
MET
1
1
Y
1
A
GLY
-20
A
GLY
2
1
Y
1
A
SER
-19
A
SER
3
1
Y
1
A
SER
-18
A
SER
4
1
Y
1
A
HIS
-17
A
HIS
5
1
Y
1
A
HIS
-16
A
HIS
6
1
Y
1
A
HIS
-15
A
HIS
7
1
Y
1
A
HIS
-14
A
HIS
8
1
Y
1
A
HIS
-13
A
HIS
9
1
Y
1
A
HIS
-12
A
HIS
10
1
Y
1
A
SER
-11
A
SER
11
1
Y
1
A
SER
-10
A
SER
12
1
Y
1
A
GLY
-9
A
GLY
13
1
Y
1
A
LEU
-8
A
LEU
14
1
Y
1
A
VAL
-7
A
VAL
15
1
Y
1
A
PRO
-6
A
PRO
16
1
Y
1
A
ARG
-5
A
ARG
17
1
Y
1
A
GLY
-4
A
GLY
18
1
Y
1
A
SER
-3
A
SER
19
1
Y
1
A
HIS
-2
A
HIS
20
1
Y
1
A
MET
-1
A
MET
21
1
Y
1
A
ALA
256
A
ALA
278
1
Y
1
A
TRP
257
A
TRP
279
1
Y
1
A
ALA
258
A
ALA
280
1
Y
1
B
MET
1
B
MET
1
1
Y
1
B
GLY
2
B
GLY
2
1
Y
1
B
GLU
3
B
GLU
3
1
Y
1
B
SER
4
B
SER
4
1
Y
1
B
SER
5
B
SER
5
1
Y
1
B
GLU
6
B
GLU
6
1
Y
1
B
A
O
O
TYR
HOH
32
2027
2.16
1_555
4_446
0.2298
0.1881
0.1901
2.300
47.800
801
16016
5.0
99.88
0.29
1
1.34
MOLECULAR REPLACEMENT
23.51
0.90
1.11
PDB ENTRY 1XWJ
ML
FLAT BULK SOLVENT MODEL
2.300
47.800
57
2261
0
0
2204
0.008
2230
1.090
3018
15.857
852
0.064
371
0.005
384
0.3490
0.2423
2.4441
109
2491
100.00
0.2582
0.2094
2.6328
144
2487
100.00
0.2492
0.1991
2.8977
148
2494
100.00
0.2637
0.1831
3.3170
136
2516
100.00
0.1895
0.1676
4.1786
130
2552
100.00
0.2080
0.1844
47.8104
134
2675
100.00
34.31
2.30
56.49
3ZDL
16055
2.9
0.11
1
7.80
5.6
100.0
0.87
2.30
2.42
3.00
1
5.5
100.0
refinement
PHENIX
(PHENIX.REFINE: 1.8_1069)
data reduction
iMOSFLM
data scaling
SCALA
phasing
PHASER
Vinculin head (1-258) in complex with a RIAM fragment
1
N
N
2
N
N
3
N
N
3
N
N
A
THR
5
A
THR
27
HELX_P
A
GLU
27
A
GLU
49
1
1
23
A
GLU
28
A
GLU
50
HELX_P
A
GLY
33
A
GLY
55
1
2
6
A
LEU
39
A
LEU
61
HELX_P
A
THR
64
A
THR
86
1
3
26
A
ASP
66
A
ASP
88
HELX_P
A
ASP
97
A
ASP
119
1
4
32
A
SER
100
A
SER
122
HELX_P
A
ALA
147
A
ALA
169
1
5
48
A
GLU
148
A
GLU
170
HELX_P
A
VAL
150
A
VAL
172
5
6
3
A
THR
152
A
THR
174
HELX_P
A
LEU
181
A
LEU
203
1
7
30
A
HIS
183
A
HIS
205
HELX_P
A
THR
217
A
THR
239
1
8
35
A
GLY
221
A
GLY
243
HELX_P
A
LEU
247
A
LEU
269
1
9
27
A
SER
251
A
SER
273
HELX_P
A
ASP
255
A
ASP
277
5
10
5
B
ASP
7
B
ASP
7
HELX_P
B
LEU
26
B
LEU
26
1
11
20
CELL ADHESION
CELL ADHESION
VINC_CHICK
UNP
1
P12003
AB1IP_HUMAN
UNP
2
Q7Z5R6
1
259
3ZDL
0
258
P12003
A
1
22
280
1
32
3ZDL
1
32
Q7Z5R6
B
2
1
32
1
expression tag
MET
-21
3ZDL
A
P12003
UNP
1
1
expression tag
GLY
-20
3ZDL
A
P12003
UNP
2
1
expression tag
SER
-19
3ZDL
A
P12003
UNP
3
1
expression tag
SER
-18
3ZDL
A
P12003
UNP
4
1
expression tag
HIS
-17
3ZDL
A
P12003
UNP
5
1
expression tag
HIS
-16
3ZDL
A
P12003
UNP
6
1
expression tag
HIS
-15
3ZDL
A
P12003
UNP
7
1
expression tag
HIS
-14
3ZDL
A
P12003
UNP
8
1
expression tag
HIS
-13
3ZDL
A
P12003
UNP
9
1
expression tag
HIS
-12
3ZDL
A
P12003
UNP
10
1
expression tag
SER
-11
3ZDL
A
P12003
UNP
11
1
expression tag
SER
-10
3ZDL
A
P12003
UNP
12
1
expression tag
GLY
-9
3ZDL
A
P12003
UNP
13
1
expression tag
LEU
-8
3ZDL
A
P12003
UNP
14
1
expression tag
VAL
-7
3ZDL
A
P12003
UNP
15
1
expression tag
PRO
-6
3ZDL
A
P12003
UNP
16
1
expression tag
ARG
-5
3ZDL
A
P12003
UNP
17
1
expression tag
GLY
-4
3ZDL
A
P12003
UNP
18
1
expression tag
SER
-3
3ZDL
A
P12003
UNP
19
1
expression tag
HIS
-2
3ZDL
A
P12003
UNP
20
1
expression tag
MET
-1
3ZDL
A
P12003
UNP
21
2
PRO
engineered mutation
TYR
32
3ZDL
B
Q8IYL7
UNP
32
32
18
P 21 21 2