0.011446 0.000000 0.000000 0.000000 0.011446 0.000000 0.000000 0.000000 0.011446 0.00000 0.00000 0.00000 Tormo-Mas, M.A. Donderis, J. Garcia-Caballer, M. Alt, A. Mir-Sanchis, I. Marina, A. Penades, J.R. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 12 90.00 90.00 90.00 87.370 87.370 87.370 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Ni 2 58.693 NICKEL (II) ION non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C4 H12 N O3 1 122.143 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL TRIS BUFFER non-polymer C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C N 79 N C N 80 N C N 81 N O N 82 N N N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N N N 95 S C N 96 N C N 97 N O N 98 N C N 99 N C N 100 N C N 101 N O N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N N N 114 N C N 115 N C N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N N N 124 S C N 125 N C N 126 N O N 127 N C Y 128 N C Y 129 N N Y 130 N C Y 131 N C Y 132 N N N 133 N O N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N O N 145 N H N 146 N H N 147 N N N 148 S C N 149 N C N 150 N O N 151 S C N 152 N C N 153 N C N 154 N C N 155 N O N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N N N 170 S C N 171 N C N 172 N O N 173 N C N 174 N C N 175 N C N 176 N C N 177 N O N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N N N 192 S C N 193 N C N 194 N O N 195 N C N 196 N C N 197 N C N 198 N C N 199 N N N 200 N O N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N N N 217 S C N 218 N C N 219 N O N 220 N C N 221 N C N 222 N S N 223 N C N 224 N O N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N NI N 237 N N N 238 S C N 239 N C N 240 N O N 241 N C Y 242 N C Y 243 N C Y 244 N C Y 245 N C Y 246 N C Y 247 N C N 248 N O N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N N N 261 S C N 262 N C N 263 N O N 264 N C N 265 N C N 266 N C N 267 N O N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N N N 278 S C N 279 N C N 280 N O N 281 N C N 282 N O N 283 N O N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N N N 292 S C N 293 N C N 294 N O N 295 R C N 296 N O N 297 N C N 298 N O N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N N N 309 S C N 310 N C N 311 N O N 312 N C Y 313 N C Y 314 N C Y 315 N C Y 316 N N Y 317 N C Y 318 N C Y 319 N C Y 320 N C Y 321 N C N 322 N O N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N C N 336 N C N 337 N C N 338 N C N 339 N N N 340 N O N 341 N O N 342 N O N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N N N 356 S C N 357 N C N 358 N O N 359 N C Y 360 N C Y 361 N C Y 362 N C Y 363 N C Y 364 N C Y 365 N C N 366 N O N 367 N O N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N N N 380 S C N 381 N C N 382 N O N 383 N C N 384 N C N 385 N C N 386 N O N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing Y 127 N sing Y 128 N doub Y 129 N doub N 130 N sing Y 131 N sing N 132 N sing Y 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N doub N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N doub N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N doub N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N doub N 231 N sing N 232 N sing N 233 N sing N 234 N sing Y 235 N doub Y 236 N sing Y 237 N sing N 238 N sing Y 239 N doub N 240 N sing Y 241 N doub N 242 N sing Y 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N doub N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N doub N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N doub N 300 N sing N 301 N sing N 302 N sing N 303 N sing Y 304 N doub Y 305 N sing Y 306 N sing N 307 N sing Y 308 N doub Y 309 N sing Y 310 N sing N 311 N sing Y 312 N sing Y 313 N doub N 314 N sing Y 315 N doub N 316 N sing Y 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N doub N 347 N sing N 348 N sing N 349 N sing N 350 N sing Y 351 N doub Y 352 N sing Y 353 N sing N 354 N sing Y 355 N doub N 356 N sing Y 357 N doub N 358 N sing Y 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N doub N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing US Mol.Cell MOCEFL 2168 1097-2765 49 947 10.1016/J.MOLCEL.2012.12.013 23333307 Phage Dutpases Control Transfer of Virulence Genes by a Proto-Oncogenic G Protein-Like Mechanism. 2013 UK Nature NATUAS 0006 0028-0836 465 779 10.1038/NATURE09065 20473284 Moonlighting Bacteriophage Proteins Derepress Staphylococcal Pathogenicity Islands. 2010 10.2210/pdb3zf2/pdb pdb_00003zf2 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 SINGLE WAVELENGTH M x-ray 1 0.9173 1.0 I04-1 Diamond 0.9173 SYNCHROTRON DIAMOND 22667.627 DUTPASE 3.6.1.23 1 man polymer 58.693 NICKEL (II) ION 2 syn non-polymer 122.143 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 2 syn non-polymer 18.015 water 40 nat water no no MGSSHHHHHHSSGLVPRGSHMASMTGGQQMGRGSMTNTLQVKLLSKNARMPERNHKTDAGYDIFSAETVVLEPQEKAVIK TDVAVSIPEGYVGLLTSRSGVSSKTHLVIETGKIDAGYHGNLGINIKNDHEDDKMQTIFLRNIDNEKIFEKERHLYKLGS YRIEKGERIAQLVIVPIWTPELKQVEEFESVSERGEKGFGSSGV MGSSHHHHHHSSGLVPRGSHMASMTGGQQMGRGSMTNTLQVKLLSKNARMPERNHKTDAGYDIFSAETVVLEPQEKAVIK TDVAVSIPEGYVGLLTSRSGVSSKTHLVIETGKIDAGYHGNLGINIKNDHEDDKMQTIFLRNIDNEKIFEKERHLYKLGS YRIEKGERIAQLVIVPIWTPELKQVEEFESVSERGEKGFGSSGV A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample 53369 STAPHYLOCOCCUS PHAGE 80ALPHA 469008 ESCHERICHIA COLI BL21(DE3) PET28A PLASMID 2.42 49.23 MOLECULAR REPLACEMENT WAS DONE USING AS MODEL THE STRUCTURE OF BACTERIOPHAGE 80ALPHA DUTPASE STRUCTURE IN PRESENCE OF DUPNHPP. 2-6% TERT-BUTANOL, 0.1M TRIS (PH 8.5), 30-50% MPD OR PEG400 diffrn_source chem_comp_atom chem_comp_bond database_2 pdbx_database_status pdbx_struct_conn_angle struct_conn struct_site repository Initial release Database references Other Refinement description Structure summary Database references Other Structure summary Data collection Data collection Database references Derived calculations Other 1 0 2013-01-30 1 1 2013-03-20 1 2 2013-04-03 1 3 2013-04-17 1 4 2018-04-25 1 5 2024-05-08 _diffrn_source.pdbx_synchrotron_beamline _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.status_code_sf _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_symmetry _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id PHAGE DUTPASES CONTROL TRANSFER OF VIRULENCE GENES BY A PROTO-ONCOGENIC G PROTEIN-LIKE MECHANISM. ( STAPHYLOCOCCUS BACTERIOPHAGE 80ALPHA DUTPASE WITH DUPNHPP). PHAGE DUTPASES CONTROL TRANSFER OF VIRULENCE GENES BY A PROTO-ONCOGENIC G PROTEIN-LIKE MECHANISM. ( STAPHYLOCOCCUS BACTERIOPHAGE 80ALPHA DUTPASE D81A MUTANT WITH DUPNHPP). PHAGE DUTPASES CONTROL TRANSFER OF VIRULENCE GENES BY A PROTO-ONCOGENIC G PROTEIN-LIKE MECHANISM. ( STAPHYLOCOCCUS BACTERIOPHAGE 80ALPHA DUTPASE D81N MUTANT WITH DUPNHPP). PHAGE DUTPASES CONTROL TRANSFER OF VIRULENCE GENES BY A PROTO-ONCOGENIC G PROTEIN-LIKE MECHANISM. ( STAPHYLOCOCCUS BACTERIOPHAGE 80ALPHA DUTPASE Y84I MUTANT). PHAGE DUTPASES CONTROL TRANSFER OF VIRULENCE GENES BY A PROTO-ONCOGENIC G PROTEIN-LIKE MECHANISM. ( STAPHYLOCOCCUS BACTERIOPHAGE 80ALPHA DUTPASE Y81A MUTANT WITH DUPNHPP). PHAGE DUTPASES CONTROL TRANSFER OF VIRULENCE GENES BY A PROTO-ONCOGENIC G PROTEIN-LIKE MECHANISM. ( STAPHYLOCOCCUS BACTERIOPHAGE 80ALPHA DUTPASE Y84F MUTANT WITH DUPNHPP). PHAGE DUTPASES CONTROL TRANSFER OF VIRULENCE GENES BY A PROTO-ONCOGENIC G PROTEIN-LIKE MECHANISM. ( STAPHYLOCOCCUS BACTERIOPHAGE 80ALPHA DUTPASE D81A D110C S168C MUTANT WITH DUPNHPP). PDBE Y PDBE 2012-12-10 REL REL NI NICKEL (II) ION TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL HOH water NI 1156 2 NI NI 1156 A TRS 1157 3 TRS TRS 1157 A TRS 1158 3 TRS TRS 1158 A NI 1159 2 NI NI 1159 A HOH 2001 4 HOH HOH 2001 A HOH 2002 4 HOH HOH 2002 A HOH 2003 4 HOH HOH 2003 A HOH 2004 4 HOH HOH 2004 A HOH 2005 4 HOH HOH 2005 A HOH 2006 4 HOH HOH 2006 A HOH 2007 4 HOH HOH 2007 A HOH 2008 4 HOH HOH 2008 A HOH 2009 4 HOH HOH 2009 A HOH 2010 4 HOH HOH 2010 A HOH 2011 4 HOH HOH 2011 A HOH 2012 4 HOH HOH 2012 A HOH 2013 4 HOH HOH 2013 A HOH 2014 4 HOH HOH 2014 A HOH 2015 4 HOH HOH 2015 A HOH 2016 4 HOH HOH 2016 A HOH 2017 4 HOH HOH 2017 A HOH 2018 4 HOH HOH 2018 A HOH 2019 4 HOH HOH 2019 A HOH 2020 4 HOH HOH 2020 A HOH 2021 4 HOH HOH 2021 A HOH 2022 4 HOH HOH 2022 A HOH 2023 4 HOH HOH 2023 A HOH 2024 4 HOH HOH 2024 A HOH 2025 4 HOH HOH 2025 A HOH 2026 4 HOH HOH 2026 A HOH 2027 4 HOH HOH 2027 A HOH 2028 4 HOH HOH 2028 A HOH 2029 4 HOH HOH 2029 A HOH 2030 4 HOH HOH 2030 A HOH 2031 4 HOH HOH 2031 A HOH 2032 4 HOH HOH 2032 A HOH 2033 4 HOH HOH 2033 A HOH 2034 4 HOH HOH 2034 A HOH 2035 4 HOH HOH 2035 A HOH 2036 4 HOH HOH 2036 A HOH 2037 4 HOH HOH 2037 A HOH 2038 4 HOH HOH 2038 A HOH 2039 4 HOH HOH 2039 A HOH 2040 4 HOH HOH 2040 A n 1 -34 A n 2 -33 A n 3 -32 A n 4 -31 A n 5 -30 A n 6 -29 A n 7 -28 A n 8 -27 A n 9 -26 A n 10 -25 A n 11 -24 A n 12 -23 A n 13 -22 A n 14 -21 A n 15 -20 A n 16 -19 A n 17 -18 A n 18 -17 A n 19 -16 A n 20 -15 A n 21 -14 A n 22 -13 A n 23 -12 A n 24 -11 A n 25 -10 A n 26 -9 A n 27 -8 A n 28 -7 A n 29 -6 A n 30 -5 A n 31 -4 A n 32 -3 A n 33 -2 A n 34 -1 A n 35 0 A THR 1 n 36 THR 1 A ASN 2 n 37 ASN 2 A THR 3 n 38 THR 3 A LEU 4 n 39 LEU 4 A GLN 5 n 40 GLN 5 A VAL 6 n 41 VAL 6 A LYS 7 n 42 LYS 7 A LEU 8 n 43 LEU 8 A LEU 9 n 44 LEU 9 A SER 10 n 45 SER 10 A LYS 11 n 46 LYS 11 A ASN 12 n 47 ASN 12 A ALA 13 n 48 ALA 13 A ARG 14 n 49 ARG 14 A MET 15 n 50 MET 15 A PRO 16 n 51 PRO 16 A GLU 17 n 52 GLU 17 A ARG 18 n 53 ARG 18 A ASN 19 n 54 ASN 19 A HIS 20 n 55 HIS 20 A LYS 21 n 56 LYS 21 A THR 22 n 57 THR 22 A ASP 23 n 58 ASP 23 A ALA 24 n 59 ALA 24 A GLY 25 n 60 GLY 25 A TYR 26 n 61 TYR 26 A ASP 27 n 62 ASP 27 A ILE 28 n 63 ILE 28 A PHE 29 n 64 PHE 29 A SER 30 n 65 SER 30 A ALA 31 n 66 ALA 31 A GLU 32 n 67 GLU 32 A THR 33 n 68 THR 33 A VAL 34 n 69 VAL 34 A VAL 35 n 70 VAL 35 A LEU 36 n 71 LEU 36 A GLU 37 n 72 GLU 37 A PRO 38 n 73 PRO 38 A GLN 39 n 74 GLN 39 A GLU 40 n 75 GLU 40 A LYS 41 n 76 LYS 41 A ALA 42 n 77 ALA 42 A VAL 43 n 78 VAL 43 A ILE 44 n 79 ILE 44 A LYS 45 n 80 LYS 45 A THR 46 n 81 THR 46 A ASP 47 n 82 ASP 47 A VAL 48 n 83 VAL 48 A ALA 49 n 84 ALA 49 A VAL 50 n 85 VAL 50 A SER 51 n 86 SER 51 A ILE 52 n 87 ILE 52 A PRO 53 n 88 PRO 53 A GLU 54 n 89 GLU 54 A GLY 55 n 90 GLY 55 A TYR 56 n 91 TYR 56 A VAL 57 n 92 VAL 57 A GLY 58 n 93 GLY 58 A LEU 59 n 94 LEU 59 A LEU 60 n 95 LEU 60 A THR 61 n 96 THR 61 A SER 62 n 97 SER 62 A ARG 63 n 98 ARG 63 A SER 64 n 99 SER 64 A GLY 65 n 100 GLY 65 A VAL 66 n 101 VAL 66 A SER 67 n 102 SER 67 A SER 68 n 103 SER 68 A LYS 69 n 104 LYS 69 A THR 70 n 105 THR 70 A HIS 71 n 106 HIS 71 A LEU 72 n 107 LEU 72 A VAL 73 n 108 VAL 73 A ILE 74 n 109 ILE 74 A GLU 75 n 110 GLU 75 A THR 76 n 111 THR 76 A GLY 77 n 112 GLY 77 A LYS 78 n 113 LYS 78 A ILE 79 n 114 ILE 79 A ASP 80 n 115 ASP 80 A ALA 81 n 116 ALA 81 A GLY 82 n 117 GLY 82 A TYR 83 n 118 TYR 83 A HIS 84 n 119 HIS 84 A GLY 85 n 120 GLY 85 A ASN 86 n 121 ASN 86 A LEU 87 n 122 LEU 87 A GLY 88 n 123 GLY 88 A ILE 89 n 124 ILE 89 A ASN 90 n 125 ASN 90 A ILE 91 n 126 ILE 91 A LYS 92 n 127 LYS 92 A ASN 93 n 128 ASN 93 A ASP 94 n 129 ASP 94 A HIS 95 n 130 HIS 95 A GLU 96 n 131 GLU 96 A ASP 97 n 132 ASP 97 A ASP 98 n 133 ASP 98 A LYS 99 n 134 LYS 99 A MET 100 n 135 MET 100 A GLN 101 n 136 GLN 101 A THR 102 n 137 THR 102 A ILE 103 n 138 ILE 103 A PHE 104 n 139 PHE 104 A LEU 105 n 140 LEU 105 A ARG 106 n 141 ARG 106 A ASN 107 n 142 ASN 107 A ILE 108 n 143 ILE 108 A ASP 109 n 144 ASP 109 A ASN 110 n 145 ASN 110 A GLU 111 n 146 GLU 111 A LYS 112 n 147 LYS 112 A ILE 113 n 148 ILE 113 A PHE 114 n 149 PHE 114 A GLU 115 n 150 GLU 115 A LYS 116 n 151 LYS 116 A GLU 117 n 152 GLU 117 A ARG 118 n 153 ARG 118 A HIS 119 n 154 HIS 119 A LEU 120 n 155 LEU 120 A TYR 121 n 156 TYR 121 A LYS 122 n 157 LYS 122 A LEU 123 n 158 LEU 123 A GLY 124 n 159 GLY 124 A SER 125 n 160 SER 125 A TYR 126 n 161 TYR 126 A ARG 127 n 162 ARG 127 A ILE 128 n 163 ILE 128 A GLU 129 n 164 GLU 129 A LYS 130 n 165 LYS 130 A GLY 131 n 166 GLY 131 A GLU 132 n 167 GLU 132 A ARG 133 n 168 ARG 133 A ILE 134 n 169 ILE 134 A ALA 135 n 170 ALA 135 A GLN 136 n 171 GLN 136 A LEU 137 n 172 LEU 137 A VAL 138 n 173 VAL 138 A ILE 139 n 174 ILE 139 A VAL 140 n 175 VAL 140 A PRO 141 n 176 PRO 141 A ILE 142 n 177 ILE 142 A TRP 143 n 178 TRP 143 A THR 144 n 179 THR 144 A PRO 145 n 180 PRO 145 A GLU 146 n 181 GLU 146 A LEU 147 n 182 LEU 147 A LYS 148 n 183 LYS 148 A GLN 149 n 184 GLN 149 A VAL 150 n 185 VAL 150 A GLU 151 n 186 GLU 151 A GLU 152 n 187 GLU 152 A PHE 153 n 188 PHE 153 A GLU 154 n 189 GLU 154 A SER 155 n 190 SER 155 A n 191 156 A n 192 157 A n 193 158 A n 194 159 A n 195 160 A n 196 161 A n 197 162 A n 198 163 A n 199 164 A n 200 165 A n 201 166 A n 202 167 A n 203 168 A n 204 169 A author_and_software_defined_assembly PISA 3 trimeric 10230 -26.1 22460 A ASP 94 A OD1 ASP 129 6_555 A NI 1156 B NI NI 1_555 A ASP 94 A OD1 ASP 129 12_554 100.1 A ASP 94 A OD1 ASP 129 6_555 A NI 1156 B NI NI 1_555 A ASP 94 A OD1 ASP 129 1_555 100.1 A ASP 94 A OD1 ASP 129 12_554 A NI 1156 B NI NI 1_555 A ASP 94 A OD1 ASP 129 1_555 100.2 A ASP 94 A OD1 ASP 129 6_555 A NI 1156 B NI NI 1_555 A HOH 2006 F O HOH 12_554 158.6 A ASP 94 A OD1 ASP 129 12_554 A NI 1156 B NI NI 1_555 A HOH 2006 F O HOH 12_554 98.5 A ASP 94 A OD1 ASP 129 1_555 A NI 1156 B NI NI 1_555 A HOH 2006 F O HOH 12_554 86.8 A ASP 94 A OD1 ASP 129 6_555 A NI 1156 B NI NI 1_555 A HOH 2006 F O HOH 1_555 86.8 A ASP 94 A OD1 ASP 129 12_554 A NI 1156 B NI NI 1_555 A HOH 2006 F O HOH 1_555 158.6 A ASP 94 A OD1 ASP 129 1_555 A NI 1156 B NI NI 1_555 A HOH 2006 F O HOH 1_555 98.5 A HOH 2006 F O HOH 12_554 A NI 1156 B NI NI 1_555 A HOH 2006 F O HOH 1_555 72.1 A ASP 94 A OD1 ASP 129 6_555 A NI 1156 B NI NI 1_555 A HOH 2006 F O HOH 6_555 98.5 A ASP 94 A OD1 ASP 129 12_554 A NI 1156 B NI NI 1_555 A HOH 2006 F O HOH 6_555 86.8 A ASP 94 A OD1 ASP 129 1_555 A NI 1156 B NI NI 1_555 A HOH 2006 F O HOH 6_555 158.6 A HOH 2006 F O HOH 12_554 A NI 1156 B NI NI 1_555 A HOH 2006 F O HOH 6_555 72.1 A HOH 2006 F O HOH 1_555 A NI 1156 B NI NI 1_555 A HOH 2006 F O HOH 6_555 72.1 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 1.0000000000 0.0000000000 0.0000000000 12_554 -y+1/2,-z,x-1/2 crystal symmetry operation 43.6850000000 0.0000000000 -43.6850000000 0.0000000000 0.0000000000 1.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 6_555 z+1/2,-x+1/2,-y crystal symmetry operation 43.6850000000 43.6850000000 0.0000000000 A N LYS 7 A N LYS 42 A O ALA 49 A O ALA 84 A O ILE 28 A O ILE 63 A N ILE 134 A N ILE 169 A N VAL 140 A N VAL 175 A O VAL 57 A O VAL 92 A N LEU 60 A N LEU 95 A O GLY 77 A O GLY 112 A N LEU 36 A N LEU 71 A O TYR 126 A O TYR 161 A N ILE 44 A N ILE 79 A O ILE 89 A O ILE 124 A N LYS 92 A N LYS 127 A O VAL 73 A O VAL 108 A N THR 102 A N THR 137 A O TYR 121 A O TYR 156 A N LEU 105 A N LEU 140 A O ILE 113 A O ILE 148 1 A NI 1156 B NI 1 A TRS 1157 C TRS 1 A NI 1159 E NI 1 A CD GLU 146 A CD GLU 181 1 Y 1 A OE1 GLU 146 A OE1 GLU 181 1 Y 1 A OE2 GLU 146 A OE2 GLU 181 1 Y 1 A MET -34 A MET 1 1 Y 1 A GLY -33 A GLY 2 1 Y 1 A SER -32 A SER 3 1 Y 1 A SER -31 A SER 4 1 Y 1 A HIS -30 A HIS 5 1 Y 1 A HIS -29 A HIS 6 1 Y 1 A HIS -28 A HIS 7 1 Y 1 A HIS -27 A HIS 8 1 Y 1 A HIS -26 A HIS 9 1 Y 1 A HIS -25 A HIS 10 1 Y 1 A SER -24 A SER 11 1 Y 1 A SER -23 A SER 12 1 Y 1 A GLY -22 A GLY 13 1 Y 1 A LEU -21 A LEU 14 1 Y 1 A VAL -20 A VAL 15 1 Y 1 A PRO -19 A PRO 16 1 Y 1 A ARG -18 A ARG 17 1 Y 1 A GLY -17 A GLY 18 1 Y 1 A SER -16 A SER 19 1 Y 1 A HIS -15 A HIS 20 1 Y 1 A MET -14 A MET 21 1 Y 1 A ALA -13 A ALA 22 1 Y 1 A SER -12 A SER 23 1 Y 1 A MET -11 A MET 24 1 Y 1 A THR -10 A THR 25 1 Y 1 A GLY -9 A GLY 26 1 Y 1 A GLY -8 A GLY 27 1 Y 1 A GLN -7 A GLN 28 1 Y 1 A GLN -6 A GLN 29 1 Y 1 A MET -5 A MET 30 1 Y 1 A GLY -4 A GLY 31 1 Y 1 A ARG -3 A ARG 32 1 Y 1 A GLY -2 A GLY 33 1 Y 1 A SER -1 A SER 34 1 Y 1 A MET 0 A MET 35 1 Y 1 A VAL 156 A VAL 191 1 Y 1 A SER 157 A SER 192 1 Y 1 A GLU 158 A GLU 193 1 Y 1 A ARG 159 A ARG 194 1 Y 1 A GLY 160 A GLY 195 1 Y 1 A GLU 161 A GLU 196 1 Y 1 A LYS 162 A LYS 197 1 Y 1 A GLY 163 A GLY 198 1 Y 1 A PHE 164 A PHE 199 1 Y 1 A GLY 165 A GLY 200 1 Y 1 A SER 166 A SER 201 1 Y 1 A SER 167 A SER 202 1 Y 1 A GLY 168 A GLY 203 1 Y 1 A VAL 169 A VAL 204 1 Y 1 A A O O HOH HOH 2029 2029 1.86 1_555 6_555 1 A A O O ASN HOH 2 2037 1.93 1_555 12_554 1 A GLN 39 69.24 -7.86 1 A SER 51 -118.68 75.55 69.397 -2.47 3.74 -7.97 4.21 -3.72 -1.74 0.935 0.907 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. INITIAL MET IS NOT TRACED. RESIDUES 157-170 ARE DISORDERED. DISORDERED REGIONS WERE NOT TRACED BECAUSE OF LACK OF ELECTRON DENSITY. 0.25220 0.21230 0.21634 2.90 43.69 503 4625 9.8 99.92 RANDOM 1 THROUGHOUT MOLECULAR REPLACEMENT 0.083 0.80 0.80 1.20 MAXIMUM LIKELIHOOD MASK 2.90 43.69 40 1293 18 0 1235 0.005 0.019 1269 0.817 1.976 1711 4.398 5.000 154 32.293 25.000 58 13.254 15.000 240 13.296 15.000 7 0.055 0.200 196 0.003 0.021 923 1.356 6.880 621 2.472 10.295 772 1.043 7.145 648 0.355 0.294 2.976 41 331 20 100.00 2.90 50.40 3ZF2 5142 2.0 0.08 1 8.70 8.5 99.9 0.40 2.90 3.06 1.90 1 9.2 100.0 refinement REFMAC 5.7.0032 data reduction XDS data scaling XDS Phage dUTPases control transfer of virulence genes by a proto- oncogenic G protein-like mechanism. (Staphylococcus bacteriophage 80alpha dUTPase). 1 N N 2 N N 3 N N 3 N N 2 N N 4 N N A ARG 63 A ARG 98 HELX_P A THR 70 A THR 105 1 1 8 metalc 2.525 A ASP 94 A OD1 ASP 129 6_555 A NI 1156 B NI NI 1_555 metalc 2.525 A ASP 94 A OD1 ASP 129 12_554 A NI 1156 B NI NI 1_555 metalc 2.524 A ASP 94 A OD1 ASP 129 1_555 A NI 1156 B NI NI 1_555 metalc 2.656 A NI 1156 B NI NI 1_555 A HOH 2006 F O HOH 12_554 metalc 2.657 A NI 1156 B NI NI 1_555 A HOH 2006 F O HOH 1_555 metalc 2.657 A NI 1156 B NI NI 1_555 A HOH 2006 F O HOH 6_555 HYDROLASE HYDROLASE, PATHOGENICITY ISLAND, SAPI INDUCTION, GENE TRANSFER, MOONLIGHTING PROTEINS, DUTP, G-PROTEIN, P-LOOP A THR 1 A THR 36 1 A ASN 2 A ASN 37 -1.93 A4ZF98_9CAUD UNP 1 A4ZF98 1 170 3ZF2 0 169 A4ZF98 A 1 35 204 1 expression tag MET -34 3ZF2 A A4ZF98 UNP 1 1 expression tag GLY -33 3ZF2 A A4ZF98 UNP 2 1 expression tag SER -32 3ZF2 A A4ZF98 UNP 3 1 expression tag SER -31 3ZF2 A A4ZF98 UNP 4 1 expression tag HIS -30 3ZF2 A A4ZF98 UNP 5 1 expression tag HIS -29 3ZF2 A A4ZF98 UNP 6 1 expression tag HIS -28 3ZF2 A A4ZF98 UNP 7 1 expression tag HIS -27 3ZF2 A A4ZF98 UNP 8 1 expression tag HIS -26 3ZF2 A A4ZF98 UNP 9 1 expression tag HIS -25 3ZF2 A A4ZF98 UNP 10 1 expression tag SER -24 3ZF2 A A4ZF98 UNP 11 1 expression tag SER -23 3ZF2 A A4ZF98 UNP 12 1 expression tag GLY -22 3ZF2 A A4ZF98 UNP 13 1 expression tag LEU -21 3ZF2 A A4ZF98 UNP 14 1 expression tag VAL -20 3ZF2 A A4ZF98 UNP 15 1 expression tag PRO -19 3ZF2 A A4ZF98 UNP 16 1 expression tag ARG -18 3ZF2 A A4ZF98 UNP 17 1 expression tag GLY -17 3ZF2 A A4ZF98 UNP 18 1 expression tag SER -16 3ZF2 A A4ZF98 UNP 19 1 expression tag HIS -15 3ZF2 A A4ZF98 UNP 20 1 expression tag MET -14 3ZF2 A A4ZF98 UNP 21 1 expression tag ALA -13 3ZF2 A A4ZF98 UNP 22 1 expression tag SER -12 3ZF2 A A4ZF98 UNP 23 1 expression tag MET -11 3ZF2 A A4ZF98 UNP 24 1 expression tag THR -10 3ZF2 A A4ZF98 UNP 25 1 expression tag GLY -9 3ZF2 A A4ZF98 UNP 26 1 expression tag GLY -8 3ZF2 A A4ZF98 UNP 27 1 expression tag GLN -7 3ZF2 A A4ZF98 UNP 28 1 expression tag GLN -6 3ZF2 A A4ZF98 UNP 29 1 expression tag MET -5 3ZF2 A A4ZF98 UNP 30 1 expression tag GLY -4 3ZF2 A A4ZF98 UNP 31 1 expression tag ARG -3 3ZF2 A A4ZF98 UNP 32 1 expression tag GLY -2 3ZF2 A A4ZF98 UNP 33 1 expression tag SER -1 3ZF2 A A4ZF98 UNP 34 2 4 2 3 2 2 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A VAL 6 A VAL 41 A LEU 8 A LEU 43 A VAL 48 A VAL 83 A VAL 50 A VAL 85 A TYR 26 A TYR 61 A PHE 29 A PHE 64 A ARG 133 A ARG 168 A PRO 141 A PRO 176 A TYR 56 A TYR 91 A SER 62 A SER 97 A GLY 77 A GLY 112 A ILE 79 A ILE 114 A VAL 34 A VAL 69 A LEU 36 A LEU 71 A TYR 126 A TYR 161 A ILE 128 A ILE 163 A LYS 41 A LYS 76 A LYS 45 A LYS 80 A GLY 88 A GLY 123 A ASN 93 A ASN 128 A LEU 72 A LEU 107 A ILE 74 A ILE 109 A GLN 101 A GLN 136 A THR 102 A THR 137 A TYR 121 A TYR 156 A LYS 122 A LYS 157 A LEU 105 A LEU 140 A ARG 106 A ARG 141 A LYS 112 A LYS 147 A ILE 113 A ILE 148 BINDING SITE FOR RESIDUE NI A 1156 A NI 1156 Software 6 BINDING SITE FOR RESIDUE TRS A 1157 A TRS 1157 Software 3 BINDING SITE FOR RESIDUE TRS A 1158 A TRS 1158 Software 6 A ASP 94 A ASP 129 6 12_554 A ASP 94 A ASP 129 6 6_555 A ASP 94 A ASP 129 6 1_555 A HOH 2006 F HOH 6 1_555 A HOH 2006 F HOH 6 6_555 A HOH 2006 F HOH 6 12_554 A THR 76 A THR 111 3 12_554 A THR 76 A THR 111 3 1_555 A THR 76 A THR 111 3 6_555 A VAL 73 A VAL 108 6 6_555 A VAL 73 A VAL 108 6 1_555 A VAL 73 A VAL 108 6 12_554 A ASP 94 A ASP 129 6 1_555 A ASP 94 A ASP 129 6 6_555 A ASP 94 A ASP 129 6 12_554 198 P 21 3