1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Lecoq, L.
Dubee, V.
Triboulet, S.
Bougault, C.
Hugonnet, J.E.
Arthur, M.
Simorre, J.P.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Acs Chem.Biol.
1554-8929
8
1140
10.1021/CB4001603
23574509
The Structure of Enterococcus Faecium L,D---Transpeptidase Acylated by Ertapenem Provides Insight Into the Inactivation Mechanism.
2013
10.2210/pdb3zg4/pdb
pdb_00003zg4
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
14572.148
ERFK/YBIS/YCFS/YNHG
2.3.2.12
CATALYTIC DOMAIN, RESIDUES 340-465
1
man
polymer
ERFK/YBIS/YCFS/YNHG FAMILY PROTEIN, LDTFM
no
no
GHMEDTYIEVDLENQHMWYYKDGKVALETDIVSGKPTTPTPAGVFYVWNKEEDATLKGTNDDGTPYESPVNYWMPIDWTG
VGIHDSDWQPEYGGDLWKTRGSHGCINTPPSVMKELFGMVEKGTPVLVF
GHMEDTYIEVDLENQHMWYYKDGKVALETDIVSGKPTTPTPAGVFYVWNKEEDATLKGTNDDGTPYESPVNYWMPIDWTG
VGIHDSDWQPEYGGDLWKTRGSHGCINTPPSVMKELFGMVEKGTPVLVF
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
1352
ENTEROCOCCUS FAECIUM
469008
ESCHERICHIA COLI
BL21(DE3)
PETTEV
PLASMID
atom_site
pdbx_database_status
pdbx_nmr_software
pdbx_nmr_spectrometer
database_2
pdbx_database_status
repository
Initial release
Database references
Atomic model
Data collection
Other
Database references
Other
1
0
2013-04-24
1
1
2013-08-28
2
0
2021-06-23
2
1
2023-06-14
_atom_site.B_iso_or_equiv
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_pdbx_database_status.status_code_cs
_pdbx_database_status.status_code_mr
_pdbx_nmr_software.name
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.status_code_nmr_data
NMR STRUCTURE OF THE CATALYTIC DOMAIN FROM E. FAECIUM L,D-TRANSPEPTIDASE ACYLATED BY ERTAPENEM
HELIX
DETERMINATION METHOD: AUTHOR PROVIDED.
SHEET
DETERMINATION METHOD: AUTHOR PROVIDED.
PDBE
Y
PDBE
2012-12-14
REL
REL
REL
REL
THE 20 NMR STRUCTURES WERE DETERMINED USING TRIPLE- RESONANCE NMR SPECTROSCOPY ON A 13C, 15N-LABELED LDTFM SAMPLE. THESE STRUCTURES WERE REFINED IN WATER USING CNS1.2
TOTAL ENERGY
1700
20
1H-15N-HSQC
1H-13C-HSQC CENTERED ON ALIPHATICS
1H-15N-HMQC DETECTING 2J
3J COUPLINGS IN HISTIDINES IMIDAZOLE RING
1H-15N-HSQC DETECTING 1J COUPLING IN HISTIDINES IMIDAZOLE RING
3D-15N- NOESY-HSQC
HNCO
3D-13C- NOESY-HSQC CENTERED ON ALIPHATICS
1H-13C-HSQC CENTERED ON AROMATICS
3D- 13C-NOESY-HSQC CENTERED ON AROMATICS
300
mM
6.4
pH
1.0
atm
298.0
K
REFINEMENT IN WATER AFTER 8 ITERATIONS
ARIA2.3
1
10% WATER/90% D2O
100% D2O
BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU,READ, RICE,SIMONSON,WARREN
refinement
CNS
structure solution
UNIO
10
structure solution
TALOS
structure solution
CcpNmr Analysis
ANALYSIS
800
Varian
Direct Drive
600
Varian
600
Varian
600
Varian
600
Varian
950
Varian
800
Bruker
GLY
338
n
1
GLY
338
A
HIS
339
n
2
HIS
339
A
MET
340
n
3
MET
340
A
GLU
341
n
4
GLU
341
A
ASP
342
n
5
ASP
342
A
THR
343
n
6
THR
343
A
TYR
344
n
7
TYR
344
A
ILE
345
n
8
ILE
345
A
GLU
346
n
9
GLU
346
A
VAL
347
n
10
VAL
347
A
ASP
348
n
11
ASP
348
A
LEU
349
n
12
LEU
349
A
GLU
350
n
13
GLU
350
A
ASN
351
n
14
ASN
351
A
GLN
352
n
15
GLN
352
A
HIS
353
n
16
HIS
353
A
MET
354
n
17
MET
354
A
TRP
355
n
18
TRP
355
A
TYR
356
n
19
TYR
356
A
TYR
357
n
20
TYR
357
A
LYS
358
n
21
LYS
358
A
ASP
359
n
22
ASP
359
A
GLY
360
n
23
GLY
360
A
LYS
361
n
24
LYS
361
A
VAL
362
n
25
VAL
362
A
ALA
363
n
26
ALA
363
A
LEU
364
n
27
LEU
364
A
GLU
365
n
28
GLU
365
A
THR
366
n
29
THR
366
A
ASP
367
n
30
ASP
367
A
ILE
368
n
31
ILE
368
A
VAL
369
n
32
VAL
369
A
SER
370
n
33
SER
370
A
GLY
371
n
34
GLY
371
A
LYS
372
n
35
LYS
372
A
PRO
373
n
36
PRO
373
A
THR
374
n
37
THR
374
A
THR
375
n
38
THR
375
A
PRO
376
n
39
PRO
376
A
THR
377
n
40
THR
377
A
PRO
378
n
41
PRO
378
A
ALA
379
n
42
ALA
379
A
GLY
380
n
43
GLY
380
A
VAL
381
n
44
VAL
381
A
PHE
382
n
45
PHE
382
A
TYR
383
n
46
TYR
383
A
VAL
384
n
47
VAL
384
A
TRP
385
n
48
TRP
385
A
ASN
386
n
49
ASN
386
A
LYS
387
n
50
LYS
387
A
GLU
388
n
51
GLU
388
A
GLU
389
n
52
GLU
389
A
ASP
390
n
53
ASP
390
A
ALA
391
n
54
ALA
391
A
THR
392
n
55
THR
392
A
LEU
393
n
56
LEU
393
A
LYS
394
n
57
LYS
394
A
GLY
395
n
58
GLY
395
A
THR
396
n
59
THR
396
A
ASN
397
n
60
ASN
397
A
ASP
398
n
61
ASP
398
A
ASP
399
n
62
ASP
399
A
GLY
400
n
63
GLY
400
A
THR
401
n
64
THR
401
A
PRO
402
n
65
PRO
402
A
TYR
403
n
66
TYR
403
A
GLU
404
n
67
GLU
404
A
SER
405
n
68
SER
405
A
PRO
406
n
69
PRO
406
A
VAL
407
n
70
VAL
407
A
ASN
408
n
71
ASN
408
A
TYR
409
n
72
TYR
409
A
TRP
410
n
73
TRP
410
A
MET
411
n
74
MET
411
A
PRO
412
n
75
PRO
412
A
ILE
413
n
76
ILE
413
A
ASP
414
n
77
ASP
414
A
TRP
415
n
78
TRP
415
A
THR
416
n
79
THR
416
A
GLY
417
n
80
GLY
417
A
VAL
418
n
81
VAL
418
A
GLY
419
n
82
GLY
419
A
ILE
420
n
83
ILE
420
A
HIS
421
n
84
HIS
421
A
ASP
422
n
85
ASP
422
A
SER
423
n
86
SER
423
A
ASP
424
n
87
ASP
424
A
TRP
425
n
88
TRP
425
A
GLN
426
n
89
GLN
426
A
PRO
427
n
90
PRO
427
A
GLU
428
n
91
GLU
428
A
TYR
429
n
92
TYR
429
A
GLY
430
n
93
GLY
430
A
GLY
431
n
94
GLY
431
A
ASP
432
n
95
ASP
432
A
LEU
433
n
96
LEU
433
A
TRP
434
n
97
TRP
434
A
LYS
435
n
98
LYS
435
A
THR
436
n
99
THR
436
A
ARG
437
n
100
ARG
437
A
GLY
438
n
101
GLY
438
A
SER
439
n
102
SER
439
A
HIS
440
n
103
HIS
440
A
GLY
441
n
104
GLY
441
A
CYS
442
n
105
CYS
442
A
ILE
443
n
106
ILE
443
A
ASN
444
n
107
ASN
444
A
THR
445
n
108
THR
445
A
PRO
446
n
109
PRO
446
A
PRO
447
n
110
PRO
447
A
SER
448
n
111
SER
448
A
VAL
449
n
112
VAL
449
A
MET
450
n
113
MET
450
A
LYS
451
n
114
LYS
451
A
GLU
452
n
115
GLU
452
A
LEU
453
n
116
LEU
453
A
PHE
454
n
117
PHE
454
A
GLY
455
n
118
GLY
455
A
MET
456
n
119
MET
456
A
VAL
457
n
120
VAL
457
A
GLU
458
n
121
GLU
458
A
LYS
459
n
122
LYS
459
A
GLY
460
n
123
GLY
460
A
THR
461
n
124
THR
461
A
PRO
462
n
125
PRO
462
A
VAL
463
n
126
VAL
463
A
LEU
464
n
127
LEU
464
A
VAL
465
n
128
VAL
465
A
PHE
466
n
129
PHE
466
A
author_and_software_defined_assembly
PISA
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ASP
348
A
N
ASP
11
A
O
HIS
353
A
O
HIS
16
A
N
LYS
358
A
N
LYS
21
A
O
LYS
361
A
O
LYS
24
A
N
PHE
382
A
N
PHE
45
A
O
VAL
463
A
O
VAL
126
A
N
GLU
388
A
N
GLU
51
A
O
TRP
410
A
O
TRP
73
A
N
MET
411
A
N
MET
74
A
O
ILE
420
A
O
ILE
83
A
N
HIS
421
A
N
HIS
84
A
O
ILE
443
A
O
ILE
106
A
N
GLY
395
A
N
GLY
58
A
O
TYR
403
A
O
TYR
66
1
A
A
O
H
TYR
ALA
356
363
1.52
1
A
A
OD1
H
ASP
ASN
348
351
1.59
1
A
A
H
O
LYS
SER
372
439
1.59
1
A
A
O
H
GLU
TRP
388
410
1.59
1
A
A
O
H
GLU
TRP
346
355
1.59
2
A
A
O
H
TYR
ALA
356
363
1.51
2
A
A
H
O
ASN
THR
397
401
1.56
2
A
A
H
O
LYS
SER
372
439
1.57
2
A
A
O
H
GLU
TRP
388
410
1.57
2
A
A
O
H
LEU
VAL
453
457
1.58
2
A
A
O
H
GLU
TRP
346
355
1.59
3
A
A
O
H
TYR
ALA
356
363
1.50
3
A
A
O
H
GLU
TRP
388
410
1.58
3
A
A
O
H
LEU
VAL
453
457
1.60
3
A
A
O
H
GLU
TRP
346
355
1.60
4
A
A
H
O
ASN
THR
397
401
1.43
4
A
A
O
H
TYR
ALA
356
363
1.54
4
A
A
H
O
LYS
SER
372
439
1.56
4
A
A
O
H
GLU
TRP
346
355
1.59
5
A
A
O
H
TYR
ALA
356
363
1.51
5
A
A
H
O
ASN
THR
397
401
1.56
5
A
A
O
H
GLU
TRP
388
410
1.56
5
A
A
OD1
HG1
ASP
THR
399
401
1.59
5
A
A
H
O
LYS
SER
372
439
1.59
6
A
A
O
H
TYR
ALA
356
363
1.54
6
A
A
O
H
LEU
VAL
453
457
1.55
6
A
A
O
H
GLU
TRP
388
410
1.56
6
A
A
H
O
ASN
THR
397
401
1.58
6
A
A
O
H
GLU
TRP
346
355
1.59
6
A
A
OD1
H
ASP
ASN
348
351
1.59
7
A
A
O
H
TYR
ALA
356
363
1.52
7
A
A
H
O
ASN
THR
397
401
1.54
7
A
A
O
H
GLU
TRP
388
410
1.57
7
A
A
O
H
LEU
VAL
453
457
1.59
7
A
A
H
O
LYS
SER
372
439
1.59
7
A
A
O
H
GLU
TRP
346
355
1.59
8
A
A
O
H
TYR
ALA
356
363
1.54
8
A
A
O
H
GLU
TRP
346
355
1.59
8
A
A
H
O
ASN
THR
397
401
1.60
9
A
A
O
H
TYR
ALA
356
363
1.54
9
A
A
H
O
LYS
SER
372
439
1.59
9
A
A
O
H
GLU
TRP
346
355
1.60
10
A
A
O
H
TYR
ALA
356
363
1.53
10
A
A
H
O
ASN
THR
397
401
1.56
10
A
A
HG1
OD2
THR
ASP
374
398
1.58
10
A
A
O
H
GLU
TRP
346
355
1.59
11
A
A
O
H
TYR
ALA
356
363
1.52
11
A
A
H
O
LYS
SER
372
439
1.53
11
A
A
H
O
ASN
THR
397
401
1.54
11
A
A
O
H
GLU
TRP
346
355
1.59
12
A
A
O
H
TYR
ALA
356
363
1.53
12
A
A
H
O
LYS
SER
372
439
1.57
12
A
A
HZ3
OD1
LYS
ASP
372
398
1.59
12
A
A
O
H
GLU
TRP
388
410
1.60
13
A
A
O
H
TYR
ALA
356
363
1.52
13
A
A
H
O
ASN
THR
397
401
1.56
13
A
A
H
O
LYS
SER
372
439
1.57
13
A
A
OD1
HG1
ASP
THR
399
401
1.58
14
A
A
O
H
TYR
ALA
356
363
1.52
14
A
A
H
O
ASN
THR
397
401
1.53
14
A
A
OD1
H
ASP
ASN
348
351
1.56
14
A
A
H
O
LYS
SER
372
439
1.58
14
A
A
O
H
GLU
TRP
388
410
1.59
14
A
A
O
H
PHE
VAL
382
463
1.60
15
A
A
O
H
TYR
ALA
356
363
1.52
15
A
A
H
O
ASN
THR
397
401
1.55
15
A
A
O
H
GLU
TRP
346
355
1.60
16
A
A
O
H
TYR
ALA
356
363
1.52
16
A
A
H
O
ASN
THR
397
401
1.54
16
A
A
H
O
LYS
SER
372
439
1.54
16
A
A
O
H
GLU
TRP
388
410
1.55
17
A
A
H
O
ASN
THR
397
401
1.44
17
A
A
O
H
TYR
ALA
356
363
1.52
17
A
A
H
O
LYS
SER
372
439
1.56
17
A
A
O
H
GLU
TRP
388
410
1.59
17
A
A
HG1
OD1
THR
ASP
374
398
1.59
17
A
A
O
H
GLU
TRP
346
355
1.60
18
A
A
O
H
TYR
ALA
356
363
1.53
18
A
A
H
O
ASN
THR
397
401
1.55
18
A
A
OD1
HG1
ASP
THR
399
401
1.59
19
A
A
O
H
MET
PHE
450
454
1.52
19
A
A
O
H
TYR
ALA
356
363
1.52
19
A
A
H
O
ASN
THR
397
401
1.55
19
A
A
H
O
LYS
SER
372
439
1.56
19
A
A
OD2
HG1
ASP
THR
414
416
1.57
19
A
A
O
H
PRO
MET
446
450
1.59
19
A
A
O
H
GLU
TRP
346
355
1.59
19
A
A
OD1
HG1
ASP
THR
399
401
1.60
20
A
A
H
O
ASN
THR
397
401
1.51
20
A
A
O
H
TYR
ALA
356
363
1.52
20
A
A
OD2
HG1
ASP
THR
414
416
1.57
20
A
A
H
O
LYS
SER
372
439
1.58
20
A
A
O
H
GLU
TRP
388
410
1.59
20
A
A
O
H
GLU
TRP
346
355
1.60
1
A
A
GLY
ASP
431
432
-147.75
2
A
A
GLY
ASP
431
432
-145.82
5
A
A
GLY
ASP
431
432
-148.05
6
A
A
GLY
ASP
431
432
-146.66
7
A
A
GLY
ASP
431
432
-147.60
9
A
A
GLY
ASP
431
432
-146.11
10
A
A
GLY
ASP
431
432
-145.67
11
A
A
GLY
ASP
431
432
-146.89
12
A
A
GLY
ASP
431
432
-146.36
13
A
A
GLY
ASP
431
432
-146.44
14
A
A
GLY
ASP
431
432
-146.68
15
A
A
GLY
ASP
431
432
-147.20
16
A
A
GLY
ASP
431
432
-146.31
17
A
A
GLY
ASP
431
432
-145.78
19
A
A
GLY
ASP
431
432
-149.87
20
A
A
GLY
ASP
431
432
-147.48
4
A
TYR
356
0.052
SIDE CHAIN
5
A
TYR
356
0.060
SIDE CHAIN
7
A
TYR
356
0.058
SIDE CHAIN
1
A
HIS
339
-174.61
94.40
1
A
MET
340
77.53
179.68
1
A
GLN
352
36.09
72.67
1
A
PRO
373
-36.12
-28.82
1
A
ALA
379
69.35
121.93
1
A
ASN
397
-51.85
179.05
1
A
ASP
432
-56.36
100.53
2
A
MET
340
71.71
-178.29
2
A
GLN
352
38.16
71.85
2
A
PRO
373
-34.13
-32.89
2
A
ALA
379
68.69
121.56
2
A
ASN
397
-54.31
-179.45
2
A
ASP
432
-54.77
101.13
2
A
LYS
459
-47.09
155.08
3
A
HIS
339
59.21
84.56
3
A
MET
340
76.47
-175.43
3
A
GLN
352
34.30
68.96
3
A
PRO
373
-34.17
-32.68
3
A
ALA
379
69.48
122.58
3
A
ASN
397
-50.85
-179.65
3
A
ASP
432
-51.08
100.60
3
A
LYS
459
-45.26
153.43
4
A
MET
340
79.48
172.98
4
A
GLN
352
38.87
73.14
4
A
PRO
373
-33.49
-31.84
4
A
ALA
379
69.36
123.22
4
A
ASN
397
-52.77
-178.83
4
A
ASP
432
-51.76
100.33
4
A
HIS
440
-101.21
68.38
5
A
MET
340
-54.46
176.53
5
A
GLN
352
35.94
71.25
5
A
PRO
373
-36.02
-31.91
5
A
ALA
379
67.05
124.25
5
A
ASN
397
-55.40
-178.18
5
A
ASP
432
-54.92
100.62
5
A
LYS
459
-46.21
154.42
6
A
MET
340
63.78
-173.58
6
A
GLU
341
-144.37
-5.69
6
A
TYR
344
-164.66
-169.81
6
A
GLN
352
38.01
69.48
6
A
PRO
373
-37.95
-31.19
6
A
ALA
379
70.64
122.79
6
A
ASN
397
-51.62
179.29
6
A
ASP
432
-55.04
101.50
6
A
LYS
459
-45.32
154.24
7
A
MET
340
69.09
178.95
7
A
PRO
373
-35.11
-31.81
7
A
ALA
379
67.66
122.87
7
A
ASN
397
-54.29
179.97
7
A
ASP
432
-55.56
100.73
7
A
HIS
440
-110.79
71.93
7
A
LYS
459
-45.40
154.14
8
A
MET
340
73.60
-175.42
8
A
GLU
341
-145.09
-4.97
8
A
GLN
352
33.60
69.08
8
A
PRO
373
-36.69
-29.15
8
A
ALA
379
69.52
122.45
8
A
ASN
397
-50.96
179.49
8
A
ASP
432
-51.94
100.60
9
A
MET
340
63.87
-176.49
9
A
GLU
341
-141.36
-6.60
9
A
GLN
352
34.09
69.27
9
A
PRO
373
-32.94
-31.67
9
A
ALA
379
68.23
123.04
9
A
ASN
397
-50.95
-179.72
9
A
ASP
432
-54.55
100.96
10
A
MET
340
62.74
-176.15
10
A
PRO
373
-36.74
-29.17
10
A
ALA
379
68.71
123.03
10
A
ASN
397
-50.21
-178.96
10
A
ASP
432
-54.97
101.60
10
A
HIS
440
-106.29
68.54
11
A
MET
340
73.85
-179.99
11
A
GLN
352
38.14
71.76
11
A
PRO
373
-37.20
-31.18
11
A
ALA
379
67.59
122.34
11
A
ASN
397
-55.62
-179.14
11
A
ASP
432
-55.28
101.42
12
A
HIS
339
-162.55
97.74
12
A
MET
340
67.99
-174.52
12
A
GLU
341
-142.41
-12.22
12
A
TYR
344
-160.94
-169.31
12
A
PRO
373
-34.34
-32.56
12
A
ALA
379
67.13
122.61
12
A
ASN
397
-50.93
-178.71
12
A
ASP
432
-55.72
101.33
12
A
HIS
440
-100.70
68.30
13
A
GLN
352
37.60
70.38
13
A
PRO
373
-33.61
-33.41
13
A
ALA
379
68.00
121.91
13
A
ASN
397
-54.70
-178.73
13
A
ASP
432
-54.90
100.99
13
A
HIS
440
-101.75
70.09
14
A
MET
340
69.12
-175.69
14
A
GLU
341
-143.11
-4.38
14
A
GLN
352
35.01
74.14
14
A
PRO
373
-34.46
-33.01
14
A
ALA
379
68.05
122.55
14
A
ASN
397
-53.10
-179.14
14
A
ASP
432
-55.65
100.81
14
A
HIS
440
-100.04
71.38
15
A
MET
340
-69.75
-175.69
15
A
PRO
373
-33.99
-36.46
15
A
ALA
379
67.89
120.95
15
A
ASN
397
-52.21
-179.56
15
A
ASP
432
-56.41
100.52
16
A
MET
340
83.69
172.20
16
A
GLN
352
36.93
73.35
16
A
PRO
373
-33.59
-31.72
16
A
ALA
379
66.31
122.63
16
A
ASN
397
-54.13
-179.38
16
A
ASP
432
-55.22
100.53
16
A
HIS
440
-101.80
71.73
17
A
MET
340
52.83
106.01
17
A
PRO
373
-34.47
-33.91
17
A
ALA
379
67.80
123.24
17
A
ASN
397
-52.72
-179.39
17
A
ASP
432
-54.59
101.06
18
A
MET
340
62.21
-173.53
18
A
GLU
341
-144.83
-4.83
18
A
GLN
352
36.24
68.84
18
A
PRO
373
-33.68
-33.67
18
A
ALA
379
68.30
122.86
18
A
ASN
397
-54.20
-178.75
18
A
ASP
432
-52.01
100.50
19
A
MET
340
76.27
-175.97
19
A
PRO
373
-34.19
-32.44
19
A
ALA
379
68.32
122.33
19
A
ASN
397
-54.36
-178.35
19
A
ASP
432
-55.97
100.52
19
A
HIS
440
-103.96
68.14
20
A
HIS
339
62.24
90.79
20
A
MET
340
63.76
-171.81
20
A
GLU
341
-149.83
-3.17
20
A
GLN
352
35.36
73.28
20
A
PRO
373
-33.61
-34.19
20
A
ALA
379
68.34
122.80
20
A
ASN
397
-52.70
-179.69
20
A
ASP
432
-56.47
101.32
20
A
HIS
440
-109.31
73.08
NMR structure of the catalytic domain from E. faecium L,D- transpeptidase
1
N
N
A
LEU
433
A
LEU
96
HELX_P
A
GLY
438
A
GLY
101
1
1
6
A
PRO
447
A
PRO
110
HELX_P
A
VAL
457
A
VAL
120
1
2
11
TRANSFERASE
TRANSFERASE, TRANSPEPTIDATION, PEPTIDOGLYCAN BIOSYNTHESIS, ANTIBIOTIC RESISTANCE
Q3Y185_ENTFC
UNP
1
Q3Y185
340
465
3ZG4
340
465
Q3Y185
A
1
3
128
1
expression tag
GLY
338
3ZG4
A
Q3Y185
UNP
1
1
expression tag
HIS
339
3ZG4
A
Q3Y185
UNP
2
1
expression tag
MET
340
3ZG4
A
Q3Y185
UNP
3
3
2
4
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
A
THR
343
A
THR
6
A
ASP
348
A
ASP
11
A
GLN
352
A
GLN
15
A
LYS
358
A
LYS
21
A
LYS
361
A
LYS
24
A
ASP
367
A
ASP
30
A
VAL
381
A
VAL
44
A
VAL
384
A
VAL
47
A
THR
461
A
THR
124
A
VAL
465
A
VAL
128
A
LYS
387
A
LYS
50
A
GLU
389
A
GLU
52
A
TYR
409
A
TYR
72
A
PRO
412
A
PRO
75
A
GLY
419
A
GLY
82
A
ASP
422
A
ASP
85
A
ILE
443
A
ILE
106
A
THR
445
A
THR
108
A
THR
392
A
THR
55
A
THR
396
A
THR
59
A
PRO
402
A
PRO
65
A
PRO
406
A
PRO
69
1
P 1