0.014742
0.008511
0.000000
0.000000
0.017023
0.000000
0.000000
0.000000
0.014841
0.00000
0.00000
0.00000
Czabotar, P.E.
Lessene, G.L.
Smith, B.J.
Colman, P.M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.00
90.00
120.00
67.832
67.832
67.383
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
C31 H28 N4 O2 S2
552.710
2-[(8E)-8-(1,3-benzothiazol-2-ylhydrazinylidene)-6,7-dihydro-5H-naphthalen-2-yl]-5-(4-phenylbutyl)-1,3-thiazole-4-carboxylic acid
non-polymer
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
R
C
N
309
N
O
N
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
N
Y
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
N
359
N
O
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
N
N
373
S
C
N
374
N
C
N
375
N
O
N
376
N
C
N
377
N
C
N
378
N
C
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
O
N
392
N
C
N
393
N
O
Y
394
N
C
Y
395
N
N
Y
396
N
C
N
397
N
C
N
398
N
C
N
399
N
C
N
400
N
C
Y
401
N
C
Y
402
N
C
Y
403
N
C
Y
404
N
C
Y
405
N
C
Y
406
N
C
Y
407
N
S
Y
408
N
C
Y
409
N
C
Y
410
N
C
Y
411
N
C
Y
412
N
C
N
413
N
C
N
414
N
C
N
415
N
C
Y
416
N
C
Y
417
N
C
N
418
N
C
N
419
N
N
N
420
N
N
Y
421
N
C
Y
422
N
S
Y
423
N
C
Y
424
N
C
Y
425
N
C
Y
426
N
N
Y
427
N
C
Y
428
N
C
Y
429
N
C
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
Y
345
N
doub
Y
346
N
sing
Y
347
N
sing
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
doub
N
378
N
sing
Y
379
N
sing
Y
380
N
doub
Y
381
N
doub
N
382
N
sing
Y
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
Y
388
N
sing
Y
389
N
doub
Y
390
N
doub
Y
391
N
sing
Y
392
N
doub
Y
393
N
sing
Y
394
N
sing
N
395
N
sing
Y
396
N
sing
Y
397
N
doub
Y
398
N
doub
Y
399
N
sing
N
400
N
sing
Y
401
N
doub
N
402
N
sing
N
403
N
sing
N
404
N
sing
Y
405
N
sing
N
406
N
sing
N
407
E
doub
N
408
N
sing
N
409
N
sing
Y
410
N
sing
Y
411
N
doub
Y
412
N
sing
Y
413
N
sing
Y
414
N
doub
Y
415
N
doub
Y
416
N
sing
Y
417
N
sing
Y
418
N
sing
Y
419
N
doub
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
US
Nat.Chem.Biol.
1552-4450
9
390
397
10.1038/NCHEMBIO.1246
23603658
Structure-Guided Design of a Selective Bcl-Xl Inhibitor
2013
10.2210/pdb3zlo/pdb
pdb_00003zlo
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
MEECO CAPILLARY
IMAGE PLATE
2007-09-03
RIGAKU RAXIS-IV
NI FILTER
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU MICROMAX
20804.918
BCL-2-LIKE PROTEIN 1
RESIDUES 1-44 AND 85-209
1
man
polymer
552.710
2-[(8E)-8-(1,3-benzothiazol-2-ylhydrazinylidene)-6,7-dihydro-5H-naphthalen-2-yl]-5-(4-phenylbutyl)-1,3-thiazole-4-carboxylic acid
1
syn
non-polymer
18.015
water
6
nat
water
BCL2-L-1, APOPTOSIS REGULATOR BCL-X, BCL-XL
no
no
MSMAMSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEGTESEAVKQALREAGDEFELRYRRAFSDLTSQLHITP
GTAYQSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEPWIQENGGWDTFVELYG
NNAAAESRKGQERLEHHHHHH
MSMAMSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEGTESEAVKQALREAGDEFELRYRRAFSDLTSQLHITP
GTAYQSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEPWIQENGGWDTFVELYG
NNAAAESRKGQERLEHHHHHH
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
HUMAN
sample
9606
HOMO SAPIENS
469008
ESCHERICHIA COLI
BL21(DE3)
PGEX-6P3
PLASMID
1
2.15
47.76
NONE
6.0
2 M (NH4)2SO4, 0.5 M GUANADINE HCL, 0.1 M MES PH 6.0
citation
struct
chem_comp_atom
chem_comp_bond
database_2
pdbx_database_status
pdbx_initial_refinement_model
struct_site
repository
Initial release
Database references
Database references
Data collection
Database references
Structure summary
Data collection
Database references
Derived calculations
Other
Refinement description
1
0
2013-04-24
1
1
2013-05-08
1
2
2013-06-05
1
3
2018-06-13
1
4
2023-12-20
_citation.page_last
_struct.title
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.status_code_sf
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
CRYSTAL STRUCTURE OF BCL-XL IN COMPLEX WITH INHIBITOR (COMPOUND 2).
CRYSTAL STRUCTURE OF BCL-XL IN COMPLEX WITH INHIBITOR (COMPOUND 3).
CRYSTAL STRUCTURE OF BCL-XL IN COMPLEX WITH INHIBITOR (WEHI-539).
PDBE
Y
PDBE
2013-02-04
REL
REL
X8U
2-[(8E)-8-(1,3-benzothiazol-2-ylhydrazinylidene)-6,7-dihydro-5H-naphthalen-2-yl]-5-(4-phenylbutyl)-1,3-thiazole-4-carboxylic acid
HOH
water
RESIDUES 45 TO 84 REMOVED, LAST 25 RESIDUES TRUNCATED
3ZK6
PDB ENTRY 3ZK6 CHAIN A
PDB
experimental model
X8U
1198
2
X8U
X8U
1198
A
HOH
2001
3
HOH
HOH
2001
A
HOH
2002
3
HOH
HOH
2002
A
HOH
2003
3
HOH
HOH
2003
A
HOH
2004
3
HOH
HOH
2004
A
HOH
2005
3
HOH
HOH
2005
A
HOH
2006
3
HOH
HOH
2006
A
n
1
-3
A
n
2
-2
A
n
3
-1
A
n
4
0
A
n
5
1
A
SER
2
n
6
SER
2
A
GLN
3
n
7
GLN
3
A
SER
4
n
8
SER
4
A
ASN
5
n
9
ASN
5
A
ARG
6
n
10
ARG
6
A
GLU
7
n
11
GLU
7
A
LEU
8
n
12
LEU
8
A
VAL
9
n
13
VAL
9
A
VAL
10
n
14
VAL
10
A
ASP
11
n
15
ASP
11
A
PHE
12
n
16
PHE
12
A
LEU
13
n
17
LEU
13
A
SER
14
n
18
SER
14
A
TYR
15
n
19
TYR
15
A
LYS
16
n
20
LYS
16
A
LEU
17
n
21
LEU
17
A
SER
18
n
22
SER
18
A
GLN
19
n
23
GLN
19
A
LYS
20
n
24
LYS
20
A
GLY
21
n
25
GLY
21
A
TYR
22
n
26
TYR
22
A
SER
23
n
27
SER
23
A
TRP
24
n
28
TRP
24
A
SER
25
n
29
SER
25
A
GLN
26
n
30
GLN
26
A
n
31
27
A
n
32
28
A
n
33
29
A
n
34
30
A
n
35
31
A
n
36
32
A
n
37
33
A
n
38
34
A
n
39
35
A
n
40
36
A
n
41
37
A
n
42
38
A
n
43
39
A
n
44
40
A
THR
41
n
45
THR
41
A
GLU
42
n
46
GLU
42
A
SER
43
n
47
SER
43
A
GLU
44
n
48
GLU
44
A
ALA
85
n
49
ALA
85
A
VAL
86
n
50
VAL
86
A
LYS
87
n
51
LYS
87
A
GLN
88
n
52
GLN
88
A
ALA
89
n
53
ALA
89
A
LEU
90
n
54
LEU
90
A
ARG
91
n
55
ARG
91
A
GLU
92
n
56
GLU
92
A
ALA
93
n
57
ALA
93
A
GLY
94
n
58
GLY
94
A
ASP
95
n
59
ASP
95
A
GLU
96
n
60
GLU
96
A
PHE
97
n
61
PHE
97
A
GLU
98
n
62
GLU
98
A
LEU
99
n
63
LEU
99
A
ARG
100
n
64
ARG
100
A
TYR
101
n
65
TYR
101
A
ARG
102
n
66
ARG
102
A
ARG
103
n
67
ARG
103
A
ALA
104
n
68
ALA
104
A
PHE
105
n
69
PHE
105
A
SER
106
n
70
SER
106
A
ASP
107
n
71
ASP
107
A
LEU
108
n
72
LEU
108
A
THR
109
n
73
THR
109
A
SER
110
n
74
SER
110
A
GLN
111
n
75
GLN
111
A
LEU
112
n
76
LEU
112
A
HIS
113
n
77
HIS
113
A
ILE
114
n
78
ILE
114
A
THR
115
n
79
THR
115
A
PRO
116
n
80
PRO
116
A
GLY
117
n
81
GLY
117
A
THR
118
n
82
THR
118
A
ALA
119
n
83
ALA
119
A
TYR
120
n
84
TYR
120
A
GLN
121
n
85
GLN
121
A
SER
122
n
86
SER
122
A
PHE
123
n
87
PHE
123
A
GLU
124
n
88
GLU
124
A
GLN
125
n
89
GLN
125
A
VAL
126
n
90
VAL
126
A
VAL
127
n
91
VAL
127
A
ASN
128
n
92
ASN
128
A
GLU
129
n
93
GLU
129
A
LEU
130
n
94
LEU
130
A
PHE
131
n
95
PHE
131
A
ARG
132
n
96
ARG
132
A
ASP
133
n
97
ASP
133
A
GLY
134
n
98
GLY
134
A
VAL
135
n
99
VAL
135
A
ASN
136
n
100
ASN
136
A
TRP
137
n
101
TRP
137
A
GLY
138
n
102
GLY
138
A
ARG
139
n
103
ARG
139
A
ILE
140
n
104
ILE
140
A
VAL
141
n
105
VAL
141
A
ALA
142
n
106
ALA
142
A
PHE
143
n
107
PHE
143
A
PHE
144
n
108
PHE
144
A
SER
145
n
109
SER
145
A
PHE
146
n
110
PHE
146
A
GLY
147
n
111
GLY
147
A
GLY
148
n
112
GLY
148
A
ALA
149
n
113
ALA
149
A
LEU
150
n
114
LEU
150
A
CYS
151
n
115
CYS
151
A
VAL
152
n
116
VAL
152
A
GLU
153
n
117
GLU
153
A
SER
154
n
118
SER
154
A
VAL
155
n
119
VAL
155
A
ASP
156
n
120
ASP
156
A
LYS
157
n
121
LYS
157
A
GLU
158
n
122
GLU
158
A
MET
159
n
123
MET
159
A
GLN
160
n
124
GLN
160
A
VAL
161
n
125
VAL
161
A
LEU
162
n
126
LEU
162
A
VAL
163
n
127
VAL
163
A
SER
164
n
128
SER
164
A
ARG
165
n
129
ARG
165
A
ILE
166
n
130
ILE
166
A
ALA
167
n
131
ALA
167
A
ALA
168
n
132
ALA
168
A
TRP
169
n
133
TRP
169
A
MET
170
n
134
MET
170
A
ALA
171
n
135
ALA
171
A
THR
172
n
136
THR
172
A
TYR
173
n
137
TYR
173
A
LEU
174
n
138
LEU
174
A
ASN
175
n
139
ASN
175
A
ASP
176
n
140
ASP
176
A
HIS
177
n
141
HIS
177
A
LEU
178
n
142
LEU
178
A
GLU
179
n
143
GLU
179
A
PRO
180
n
144
PRO
180
A
TRP
181
n
145
TRP
181
A
ILE
182
n
146
ILE
182
A
GLN
183
n
147
GLN
183
A
GLU
184
n
148
GLU
184
A
ASN
185
n
149
ASN
185
A
GLY
186
n
150
GLY
186
A
GLY
187
n
151
GLY
187
A
TRP
188
n
152
TRP
188
A
ASP
189
n
153
ASP
189
A
THR
190
n
154
THR
190
A
PHE
191
n
155
PHE
191
A
VAL
192
n
156
VAL
192
A
GLU
193
n
157
GLU
193
A
LEU
194
n
158
LEU
194
A
TYR
195
n
159
TYR
195
A
GLY
196
n
160
GLY
196
A
ASN
197
n
161
ASN
197
A
n
162
198
A
n
163
199
A
n
164
200
A
n
165
201
A
n
166
202
A
n
167
203
A
n
168
204
A
n
169
205
A
n
170
206
A
n
171
207
A
n
172
208
A
n
173
209
A
n
174
210
A
n
175
211
A
n
176
212
A
n
177
213
A
n
178
214
A
n
179
215
A
n
180
216
A
n
181
217
A
4.5959
-1.8656
0.4301
7.1377
2.4998
8.2921
0.4600
0.4506
0.5760
-0.4690
-0.0115
-0.3450
-2.8294
1.1550
-0.5120
0.5798
-0.2062
0.1348
0.6867
0.0488
0.8034
refined
24.3098
-17.9980
10.2882
X-RAY DIFFRACTION
2.9739
-2.2725
-3.2247
2.5578
1.7197
4.0768
-0.2396
-0.7391
1.1532
0.5114
0.1119
0.1042
0.4822
1.9492
0.0583
0.6871
-0.3736
-0.0926
1.3133
-0.2868
0.7828
refined
30.0062
-17.9848
17.8025
X-RAY DIFFRACTION
3.8586
3.8601
-3.9833
3.8372
-3.9471
4.0828
0.7302
0.1718
0.3180
0.5840
0.2106
0.6081
-0.8885
-0.8075
-0.5536
0.6614
0.0944
0.1333
0.7318
0.0562
0.6410
refined
14.4693
-19.3449
14.0264
X-RAY DIFFRACTION
4.1780
-5.8020
0.6779
8.8352
0.5875
3.8514
-1.6024
-0.4176
-0.8457
0.6249
1.0127
0.0889
1.8955
-0.5696
0.6231
1.0021
-0.0358
0.1138
0.8588
0.1955
0.8997
refined
18.0004
-36.6832
14.0215
X-RAY DIFFRACTION
9.2307
0.9945
-2.1818
6.8934
-0.6738
6.8618
0.2166
0.7933
-0.3833
-0.6174
-0.0737
-0.2871
1.4029
0.6151
-0.0843
0.5028
0.0261
0.0531
0.7416
-0.0016
0.4296
refined
26.3342
-30.2301
6.6523
X-RAY DIFFRACTION
4.6342
0.5518
4.1423
7.3531
-2.1784
5.2846
-0.3633
3.4807
1.4744
-1.2517
0.0495
0.8141
-1.2525
-0.8553
0.4798
0.6727
0.1713
-0.0966
1.7329
0.5354
1.0129
refined
14.2270
-21.7159
-4.4669
X-RAY DIFFRACTION
1.8796
0.0903
0.1019
0.7328
0.8559
0.9977
0.0264
-0.0752
-0.2305
0.4427
0.7520
0.6079
-0.3658
-1.4436
1.5520
0.3781
0.3878
-0.0843
1.6700
0.7281
1.2530
refined
9.2178
-16.8259
4.7468
X-RAY DIFFRACTION
X-RAY DIFFRACTION
1
CHAIN A AND (RESSEQ 2:19)
X-RAY DIFFRACTION
2
CHAIN A AND (RESSEQ 20:81)
X-RAY DIFFRACTION
3
CHAIN A AND (RESSEQ 82:100)
X-RAY DIFFRACTION
4
CHAIN A AND (RESSEQ 101:111)
X-RAY DIFFRACTION
5
CHAIN A AND (RESSEQ 112:177)
X-RAY DIFFRACTION
6
CHAIN A AND (RESSEQ 178:186)
X-RAY DIFFRACTION
7
CHAIN A AND (RESSEQ 187:196)
author_and_software_defined_assembly
PISA
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
CG
GLU
42
A
CG
GLU
46
1
Y
1
A
CD
GLU
42
A
CD
GLU
46
1
Y
1
A
OE1
GLU
42
A
OE1
GLU
46
1
Y
1
A
OE2
GLU
42
A
OE2
GLU
46
1
Y
1
A
CA
ASN
197
A
CA
ASN
161
1
Y
1
A
C
ASN
197
A
C
ASN
161
1
Y
1
A
O
ASN
197
A
O
ASN
161
1
Y
1
A
CB
ASN
197
A
CB
ASN
161
1
Y
1
A
CG
ASN
197
A
CG
ASN
161
1
Y
1
A
OD1
ASN
197
A
OD1
ASN
161
1
Y
1
A
ND2
ASN
197
A
ND2
ASN
161
1
Y
1
A
MET
-3
A
MET
1
1
Y
1
A
SER
-2
A
SER
2
1
Y
1
A
MET
-1
A
MET
3
1
Y
1
A
ALA
0
A
ALA
4
1
Y
1
A
MET
1
A
MET
5
1
Y
1
A
PHE
27
A
PHE
31
1
Y
1
A
SER
28
A
SER
32
1
Y
1
A
ASP
29
A
ASP
33
1
Y
1
A
VAL
30
A
VAL
34
1
Y
1
A
GLU
31
A
GLU
35
1
Y
1
A
GLU
32
A
GLU
36
1
Y
1
A
ASN
33
A
ASN
37
1
Y
1
A
ARG
34
A
ARG
38
1
Y
1
A
THR
35
A
THR
39
1
Y
1
A
GLU
36
A
GLU
40
1
Y
1
A
ALA
37
A
ALA
41
1
Y
1
A
PRO
38
A
PRO
42
1
Y
1
A
GLU
39
A
GLU
43
1
Y
1
A
GLY
40
A
GLY
44
1
Y
1
A
ASN
198
A
ASN
162
1
Y
1
A
ALA
199
A
ALA
163
1
Y
1
A
ALA
200
A
ALA
164
1
Y
1
A
ALA
201
A
ALA
165
1
Y
1
A
GLU
202
A
GLU
166
1
Y
1
A
SER
203
A
SER
167
1
Y
1
A
ARG
204
A
ARG
168
1
Y
1
A
LYS
205
A
LYS
169
1
Y
1
A
GLY
206
A
GLY
170
1
Y
1
A
GLN
207
A
GLN
171
1
Y
1
A
GLU
208
A
GLU
172
1
Y
1
A
ARG
209
A
ARG
173
1
Y
1
A
LEU
210
A
LEU
174
1
Y
1
A
GLU
211
A
GLU
175
1
Y
1
A
HIS
212
A
HIS
176
1
Y
1
A
HIS
213
A
HIS
177
1
Y
1
A
HIS
214
A
HIS
178
1
Y
1
A
HIS
215
A
HIS
179
1
Y
1
A
HIS
216
A
HIS
180
1
Y
1
A
HIS
217
A
HIS
181
1
Y
1
A
SER
25
-49.67
85.16
1
A
ARG
102
-28.19
-44.42
0.2822
0.1932
0.1972
2.601
33.916
265
5766
4.6
99.88
0.40
1
1.38
MOLECULAR REPLACEMENT
31.36
0.90
1.20
PDB ENTRY 3ZK6 CHAIN A
ML
FLAT BULK SOLVENT MODEL
2.601
33.916
6
1187
39
0
1142
0.009
1213
1.188
1644
13.438
425
0.069
167
0.005
211
0.3517
0.2517
3.2767
137
2678
100.00
0.2630
0.1785
33.9189
128
2823
100.00
2.60
50.00
3ZLO
5766
-3.0
0.09
1
0.00
4.4
99.9
0.55
2.60
2.69
3.50
1
3.5
99.1
refinement
PHENIX
(PHENIX.REFINE: 1.8.1_1168)
data reduction
DENZO
data scaling
SCALEPACK
phasing
PHASER
Crystal structure of BCL-XL in complex with inhibitor (Compound 6)
1
N
N
2
N
N
3
N
N
A
SER
2
A
SER
6
HELX_P
A
LYS
20
A
LYS
24
1
1
19
A
GLU
42
A
GLU
46
HELX_P
A
TYR
101
A
TYR
65
1
2
20
A
ARG
102
A
ARG
66
HELX_P
A
PHE
105
A
PHE
69
5
3
4
A
ASP
107
A
ASP
71
HELX_P
A
LEU
112
A
LEU
76
1
4
6
A
ALA
119
A
ALA
83
HELX_P
A
PHE
131
A
PHE
95
1
5
13
A
ASN
136
A
ASN
100
HELX_P
A
LYS
157
A
LYS
121
1
6
22
A
VAL
161
A
VAL
125
HELX_P
A
LEU
178
A
LEU
142
1
7
18
A
LEU
178
A
LEU
142
HELX_P
A
ASN
185
A
ASN
149
1
8
8
A
GLY
186
A
GLY
150
HELX_P
A
GLY
196
A
GLY
160
1
9
11
APOPTOSIS
APOPTOSIS, INHIBITOR
B2CL1_HUMAN
UNP
1
Q07817
1
44
3ZLO
1
44
Q07817
A
1
5
48
85
209
3ZLO
85
209
Q07817
A
1
49
173
1
expression tag
MET
-3
3ZLO
A
Q07817
UNP
1
1
expression tag
SER
-2
3ZLO
A
Q07817
UNP
2
1
expression tag
MET
-1
3ZLO
A
Q07817
UNP
3
1
expression tag
ALA
0
3ZLO
A
Q07817
UNP
4
1
expression tag
LEU
210
3ZLO
A
Q07817
UNP
174
1
expression tag
GLU
211
3ZLO
A
Q07817
UNP
175
1
expression tag
HIS
212
3ZLO
A
Q07817
UNP
176
1
expression tag
HIS
213
3ZLO
A
Q07817
UNP
177
1
expression tag
HIS
214
3ZLO
A
Q07817
UNP
178
1
expression tag
HIS
215
3ZLO
A
Q07817
UNP
179
1
expression tag
HIS
216
3ZLO
A
Q07817
UNP
180
1
expression tag
HIS
217
3ZLO
A
Q07817
UNP
181
BINDING SITE FOR RESIDUE X8U A 1198
A
X8U
1198
Software
16
A
ALA
93
A
ALA
57
16
1_555
A
PHE
97
A
PHE
61
16
1_555
A
TYR
101
A
TYR
65
16
1_555
A
PHE
105
A
PHE
69
16
1_555
A
SER
106
A
SER
70
16
1_555
A
ASP
107
A
ASP
71
16
1_555
A
LEU
108
A
LEU
72
16
1_555
A
GLU
129
A
GLU
93
16
1_555
A
LEU
130
A
LEU
94
16
1_555
A
ASN
136
A
ASN
100
16
1_555
A
GLY
138
A
GLY
102
16
1_555
A
ARG
139
A
ARG
103
16
1_555
A
SER
145
A
SER
109
16
1_555
A
PHE
146
A
PHE
110
16
1_555
A
GLN
160
A
GLN
124
16
5_445
A
TYR
195
A
TYR
159
16
1_555
154
P 32 2 1