0.006847 0.003953 0.000000 0.000000 0.007906 0.000000 0.000000 0.000000 0.017085 0.00000 0.00000 0.00000 Ekkebus, R. vanKasteren, S.I. Kulathu, Y. Scholten, A. Berlin, I. deJong, A. Goerdayal, G. Neefjes, J. Heck, A.J.R. Komander, D. Ovaa, H. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 12 90.00 90.00 120.00 146.050 146.050 58.530 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N 57.094 prop-2-en-1-amine ALLYLAMINE non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N C N 75 N C N 76 N C N 77 N N N 78 N H N 79 N H N 80 N H N 81 N H N 82 N H N 83 N H N 84 N H N 85 N N N 86 R C N 87 N C N 88 N O N 89 N C N 90 N S N 91 N O N 92 N H N 93 N H N 94 N H N 95 N H N 96 N H N 97 N H N 98 N H N 99 N N N 100 S C N 101 N C N 102 N O N 103 N C N 104 N C N 105 N C N 106 N O N 107 N N N 108 N O N 109 N H N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N N N 120 S C N 121 N C N 122 N O N 123 N C N 124 N C N 125 N C N 126 N O N 127 N O N 128 N O N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N N N 139 N C N 140 N C N 141 N O N 142 N O N 143 N H N 144 N H N 145 N H N 146 N H N 147 N H N 148 N N N 149 S C N 150 N C N 151 N O N 152 N C Y 153 N C Y 154 N N Y 155 N C Y 156 N C Y 157 N N N 158 N O N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N O N 170 N H N 171 N H N 172 N N N 173 S C N 174 N C N 175 N O N 176 S C N 177 N C N 178 N C N 179 N C N 180 N O N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N N N 195 S C N 196 N C N 197 N O N 198 N C N 199 N C N 200 N C N 201 N C N 202 N O N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N N N 217 S C N 218 N C N 219 N O N 220 N C N 221 N C N 222 N C N 223 N C N 224 N N N 225 N O N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N N N 242 S C N 243 N C N 244 N O N 245 N C N 246 N C N 247 N S N 248 N C N 249 N O N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N N N 262 S C N 263 N C N 264 N O N 265 N C Y 266 N C Y 267 N C Y 268 N C Y 269 N C Y 270 N C Y 271 N C N 272 N O N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N N N 285 S C N 286 N C N 287 N O N 288 N C N 289 N C N 290 N C N 291 N O N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N N N 302 S C N 303 N C N 304 N O N 305 N C N 306 N O N 307 N O N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N N N 316 S C N 317 N C N 318 N O N 319 R C N 320 N O N 321 N C N 322 N O N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N N N 333 S C N 334 N C N 335 N O N 336 N C Y 337 N C Y 338 N C Y 339 N C Y 340 N N Y 341 N C Y 342 N C Y 343 N C Y 344 N C Y 345 N C N 346 N O N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N N N 360 S C N 361 N C N 362 N O N 363 N C Y 364 N C Y 365 N C Y 366 N C Y 367 N C Y 368 N C Y 369 N C N 370 N O N 371 N O N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N N N 384 S C N 385 N C N 386 N O N 387 N C N 388 N C N 389 N C N 390 N O N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N doub N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N doub N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N doub N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N doub N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N doub N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N doub N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing Y 150 N sing Y 151 N doub Y 152 N doub N 153 N sing Y 154 N sing N 155 N sing Y 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N doub N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N doub N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N doub N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N doub N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N doub N 254 N sing N 255 N sing N 256 N sing N 257 N sing Y 258 N doub Y 259 N sing Y 260 N sing N 261 N sing Y 262 N doub N 263 N sing Y 264 N doub N 265 N sing Y 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N doub N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N doub N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N doub N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N doub N 323 N sing N 324 N sing N 325 N sing N 326 N sing Y 327 N doub Y 328 N sing Y 329 N sing N 330 N sing Y 331 N doub Y 332 N sing Y 333 N sing N 334 N sing Y 335 N sing Y 336 N doub N 337 N sing Y 338 N doub N 339 N sing Y 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N doub N 351 N sing N 352 N sing N 353 N sing N 354 N sing Y 355 N doub Y 356 N sing Y 357 N sing N 358 N sing Y 359 N doub N 360 N sing Y 361 N doub N 362 N sing Y 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N doub N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing US J.Am.Chem.Soc. JACSAT 0004 0002-7863 135 2867 10.1021/JA309802N 23387960 On Terminal Alkynes that Can React with Active-Site Cysteine Nucleophiles in Proteases. 2013 10.2210/pdb3znh/pdb pdb_00003znh 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD 2005-05-10 ADSC CCD SINGLE WAVELENGTH M x-ray 1 0.9795 1.0 I04 Diamond 0.9795 SYNCHROTRON DIAMOND BEAMLINE I04 20857.414 UBIQUITIN THIOESTERASE 3.4.19.12 OTU DOMAIN, RESIDUES 1-183 1 man polymer GLY76 IS REPLACED WITH A PROPARGYL GROUP 8558.857 POLYUBIQUITIN-B YES 1 syn polymer 18.015 water 48 nat water OTU DOMAIN OF CRIMEAN CONGO HEMORRHAGIC FEVER VIRUS CCHFV UBIQUITIN PROPARGYL, UBIQUITIN no no MDFLRSLDWTQVIAGQYVSNPRFNISDYFEIVRQPGDGNCFYHSIAELTMPNKTDHSYHYIKRLTESAARKYYQEEPEAR LVGLSLEDYLKRMLSDNEWGSTLEASMLAKEMGITIIIWTVAASDEVEAGIKFGDGDVFTAVNLLHSGQTHFDALRILPQ FETDTREALSLMDRVIAVDQLTS MDFLRSLDWTQVIAGQYVSNPRFNISDYFEIVRQPGDGNCFYHSIAELTMPNKTDHSYHYIKRLTESAARKYYQEEPEAR LVGLSLEDYLKRMLSDNEWGSTLEASMLAKEMGITIIIWTVAASDEVEAGIKFGDGDVFTAVNLLHSGQTHFDALRILPQ FETDTREALSLMDRVIAVDQLTS A polypeptide(L) no yes MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG(AYE) MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGX B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n IBAR10200 sample DNA GENERATED BY GENE SYNTHESIS 652961 CRIMEAN-CONGO HEMORRHAGIC FEVER VIRUS 511693 ESCHERICHIA COLI BL21 ROSETTA2 PLACI 1 3.1 60 NONE 6.5 20-30% PEG 8000, 100 MM NA CACODYLATE PH 6.5, 100 MM MG ACETATE, AND 2% N-OCTYL-BETA-D-GLUCOSIDE. chem_comp_atom chem_comp_bond database_2 pdbx_database_status pdbx_initial_refinement_model pdbx_struct_special_symmetry struct_conn repository Initial release Database references Database references Data collection Database references Derived calculations Other Refinement description 1 0 2013-02-27 1 1 2013-03-06 1 2 2013-03-20 1 3 2023-12-20 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.status_code_sf _struct_conn.pdbx_leaving_atom_flag _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id PDBE Y PDBE 2013-02-14 REL REL HOH water 9606 HUMAN HOMO SAPIENS sample ALLYLAMINE (AYE): THIS IS THE PRODUCT OF COVALENT MODIFICATION FROM PROPARGYL UBIQUITIN WITH A CYS. THE ETHANAMINE IS COVALENTLY LINKED TO CYS40 OF MOLECULE A. RESIDUES 1-183 RESIDUE 76 IS REPLACED WITH A PROPARGYL MOIETY, WHICH FORMS A QUATERNARY VINYL THIOETHER WITH CYS40 OF MOLECULE A. 3PHW PDB ENTRY 3PHW PDB experimental model HOH 2001 3 HOH HOH 2001 A HOH 2002 3 HOH HOH 2002 A HOH 2003 3 HOH HOH 2003 A HOH 2004 3 HOH HOH 2004 A HOH 2005 3 HOH HOH 2005 A HOH 2006 3 HOH HOH 2006 A HOH 2007 3 HOH HOH 2007 A HOH 2008 3 HOH HOH 2008 A HOH 2009 3 HOH HOH 2009 A HOH 2010 3 HOH HOH 2010 A HOH 2011 3 HOH HOH 2011 A HOH 2012 3 HOH HOH 2012 A HOH 2013 3 HOH HOH 2013 A HOH 2014 3 HOH HOH 2014 A HOH 2015 3 HOH HOH 2015 A HOH 2016 3 HOH HOH 2016 A HOH 2017 3 HOH HOH 2017 A HOH 2018 3 HOH HOH 2018 A HOH 2019 3 HOH HOH 2019 A HOH 2020 3 HOH HOH 2020 A HOH 2021 3 HOH HOH 2021 A HOH 2022 3 HOH HOH 2022 A HOH 2023 3 HOH HOH 2023 A HOH 2024 3 HOH HOH 2024 A HOH 2025 3 HOH HOH 2025 A HOH 2026 3 HOH HOH 2026 A HOH 2027 3 HOH HOH 2027 A HOH 2028 3 HOH HOH 2028 A HOH 2029 3 HOH HOH 2029 A HOH 2030 3 HOH HOH 2030 A HOH 2031 3 HOH HOH 2031 A HOH 2032 3 HOH HOH 2032 A HOH 2033 3 HOH HOH 2033 A HOH 2034 3 HOH HOH 2034 A HOH 2035 3 HOH HOH 2035 A HOH 2036 3 HOH HOH 2036 A HOH 2037 3 HOH HOH 2037 A HOH 2038 3 HOH HOH 2038 A HOH 2039 3 HOH HOH 2039 A HOH 2040 3 HOH HOH 2040 A HOH 2001 3 HOH HOH 2001 B HOH 2002 3 HOH HOH 2002 B HOH 2003 3 HOH HOH 2003 B HOH 2004 3 HOH HOH 2004 B HOH 2005 3 HOH HOH 2005 B HOH 2006 3 HOH HOH 2006 B HOH 2007 3 HOH HOH 2007 B HOH 2008 3 HOH HOH 2008 B n 1 1 A n 2 2 A n 3 3 A n 4 4 A n 5 5 A n 6 6 A LEU 7 n 7 LEU 7 A ASP 8 n 8 ASP 8 A TRP 9 n 9 TRP 9 A THR 10 n 10 THR 10 A GLN 11 n 11 GLN 11 A VAL 12 n 12 VAL 12 A ILE 13 n 13 ILE 13 A ALA 14 n 14 ALA 14 A GLY 15 n 15 GLY 15 A GLN 16 n 16 GLN 16 A TYR 17 n 17 TYR 17 A VAL 18 n 18 VAL 18 A SER 19 n 19 SER 19 A ASN 20 n 20 ASN 20 A PRO 21 n 21 PRO 21 A ARG 22 n 22 ARG 22 A PHE 23 n 23 PHE 23 A ASN 24 n 24 ASN 24 A ILE 25 n 25 ILE 25 A SER 26 n 26 SER 26 A ASP 27 n 27 ASP 27 A TYR 28 n 28 TYR 28 A PHE 29 n 29 PHE 29 A GLU 30 n 30 GLU 30 A ILE 31 n 31 ILE 31 A VAL 32 n 32 VAL 32 A ARG 33 n 33 ARG 33 A GLN 34 n 34 GLN 34 A PRO 35 n 35 PRO 35 A GLY 36 n 36 GLY 36 A ASP 37 n 37 ASP 37 A GLY 38 n 38 GLY 38 A ASN 39 n 39 ASN 39 A CYS 40 n 40 CYS 40 A PHE 41 n 41 PHE 41 A TYR 42 n 42 TYR 42 A HIS 43 n 43 HIS 43 A SER 44 n 44 SER 44 A ILE 45 n 45 ILE 45 A ALA 46 n 46 ALA 46 A GLU 47 n 47 GLU 47 A LEU 48 n 48 LEU 48 A THR 49 n 49 THR 49 A MET 50 n 50 MET 50 A PRO 51 n 51 PRO 51 A ASN 52 n 52 ASN 52 A LYS 53 n 53 LYS 53 A THR 54 n 54 THR 54 A ASP 55 n 55 ASP 55 A HIS 56 n 56 HIS 56 A SER 57 n 57 SER 57 A TYR 58 n 58 TYR 58 A HIS 59 n 59 HIS 59 A TYR 60 n 60 TYR 60 A ILE 61 n 61 ILE 61 A LYS 62 n 62 LYS 62 A ARG 63 n 63 ARG 63 A LEU 64 n 64 LEU 64 A THR 65 n 65 THR 65 A GLU 66 n 66 GLU 66 A SER 67 n 67 SER 67 A ALA 68 n 68 ALA 68 A ALA 69 n 69 ALA 69 A ARG 70 n 70 ARG 70 A LYS 71 n 71 LYS 71 A TYR 72 n 72 TYR 72 A TYR 73 n 73 TYR 73 A GLN 74 n 74 GLN 74 A GLU 75 n 75 GLU 75 A GLU 76 n 76 GLU 76 A PRO 77 n 77 PRO 77 A GLU 78 n 78 GLU 78 A ALA 79 n 79 ALA 79 A ARG 80 n 80 ARG 80 A LEU 81 n 81 LEU 81 A VAL 82 n 82 VAL 82 A GLY 83 n 83 GLY 83 A LEU 84 n 84 LEU 84 A SER 85 n 85 SER 85 A LEU 86 n 86 LEU 86 A GLU 87 n 87 GLU 87 A ASP 88 n 88 ASP 88 A TYR 89 n 89 TYR 89 A LEU 90 n 90 LEU 90 A LYS 91 n 91 LYS 91 A ARG 92 n 92 ARG 92 A MET 93 n 93 MET 93 A LEU 94 n 94 LEU 94 A SER 95 n 95 SER 95 A ASP 96 n 96 ASP 96 A ASN 97 n 97 ASN 97 A GLU 98 n 98 GLU 98 A TRP 99 n 99 TRP 99 A GLY 100 n 100 GLY 100 A SER 101 n 101 SER 101 A THR 102 n 102 THR 102 A LEU 103 n 103 LEU 103 A GLU 104 n 104 GLU 104 A ALA 105 n 105 ALA 105 A SER 106 n 106 SER 106 A MET 107 n 107 MET 107 A LEU 108 n 108 LEU 108 A ALA 109 n 109 ALA 109 A LYS 110 n 110 LYS 110 A GLU 111 n 111 GLU 111 A MET 112 n 112 MET 112 A GLY 113 n 113 GLY 113 A ILE 114 n 114 ILE 114 A THR 115 n 115 THR 115 A ILE 116 n 116 ILE 116 A ILE 117 n 117 ILE 117 A ILE 118 n 118 ILE 118 A TRP 119 n 119 TRP 119 A THR 120 n 120 THR 120 A VAL 121 n 121 VAL 121 A ALA 122 n 122 ALA 122 A n 123 123 A n 124 124 A ASP 125 n 125 ASP 125 A GLU 126 n 126 GLU 126 A VAL 127 n 127 VAL 127 A GLU 128 n 128 GLU 128 A ALA 129 n 129 ALA 129 A GLY 130 n 130 GLY 130 A ILE 131 n 131 ILE 131 A LYS 132 n 132 LYS 132 A PHE 133 n 133 PHE 133 A GLY 134 n 134 GLY 134 A ASP 135 n 135 ASP 135 A GLY 136 n 136 GLY 136 A ASP 137 n 137 ASP 137 A VAL 138 n 138 VAL 138 A PHE 139 n 139 PHE 139 A THR 140 n 140 THR 140 A ALA 141 n 141 ALA 141 A VAL 142 n 142 VAL 142 A ASN 143 n 143 ASN 143 A LEU 144 n 144 LEU 144 A LEU 145 n 145 LEU 145 A HIS 146 n 146 HIS 146 A SER 147 n 147 SER 147 A GLY 148 n 148 GLY 148 A GLN 149 n 149 GLN 149 A THR 150 n 150 THR 150 A HIS 151 n 151 HIS 151 A PHE 152 n 152 PHE 152 A ASP 153 n 153 ASP 153 A ALA 154 n 154 ALA 154 A LEU 155 n 155 LEU 155 A ARG 156 n 156 ARG 156 A ILE 157 n 157 ILE 157 A LEU 158 n 158 LEU 158 A PRO 159 n 159 PRO 159 A GLN 160 n 160 GLN 160 A PHE 161 n 161 PHE 161 A n 162 162 A n 163 163 A n 164 164 A n 165 165 A n 166 166 A n 167 167 A n 168 168 A n 169 169 A n 170 170 A n 171 171 A n 172 172 A n 173 173 A n 174 174 A n 175 175 A n 176 176 A n 177 177 A n 178 178 A n 179 179 A n 180 180 A n 181 181 A n 182 182 A n 183 183 A MET 1 n 1 MET 1 B GLN 2 n 2 GLN 2 B ILE 3 n 3 ILE 3 B PHE 4 n 4 PHE 4 B VAL 5 n 5 VAL 5 B LYS 6 n 6 LYS 6 B THR 7 n 7 THR 7 B LEU 8 n 8 LEU 8 B THR 9 n 9 THR 9 B GLY 10 n 10 GLY 10 B LYS 11 n 11 LYS 11 B THR 12 n 12 THR 12 B ILE 13 n 13 ILE 13 B THR 14 n 14 THR 14 B LEU 15 n 15 LEU 15 B GLU 16 n 16 GLU 16 B VAL 17 n 17 VAL 17 B GLU 18 n 18 GLU 18 B PRO 19 n 19 PRO 19 B SER 20 n 20 SER 20 B ASP 21 n 21 ASP 21 B THR 22 n 22 THR 22 B ILE 23 n 23 ILE 23 B GLU 24 n 24 GLU 24 B ASN 25 n 25 ASN 25 B VAL 26 n 26 VAL 26 B LYS 27 n 27 LYS 27 B ALA 28 n 28 ALA 28 B LYS 29 n 29 LYS 29 B ILE 30 n 30 ILE 30 B GLN 31 n 31 GLN 31 B ASP 32 n 32 ASP 32 B LYS 33 n 33 LYS 33 B GLU 34 n 34 GLU 34 B GLY 35 n 35 GLY 35 B ILE 36 n 36 ILE 36 B PRO 37 n 37 PRO 37 B PRO 38 n 38 PRO 38 B ASP 39 n 39 ASP 39 B GLN 40 n 40 GLN 40 B GLN 41 n 41 GLN 41 B ARG 42 n 42 ARG 42 B LEU 43 n 43 LEU 43 B ILE 44 n 44 ILE 44 B PHE 45 n 45 PHE 45 B ALA 46 n 46 ALA 46 B GLY 47 n 47 GLY 47 B LYS 48 n 48 LYS 48 B GLN 49 n 49 GLN 49 B LEU 50 n 50 LEU 50 B GLU 51 n 51 GLU 51 B ASP 52 n 52 ASP 52 B GLY 53 n 53 GLY 53 B ARG 54 n 54 ARG 54 B THR 55 n 55 THR 55 B LEU 56 n 56 LEU 56 B SER 57 n 57 SER 57 B ASP 58 n 58 ASP 58 B TYR 59 n 59 TYR 59 B ASN 60 n 60 ASN 60 B ILE 61 n 61 ILE 61 B GLN 62 n 62 GLN 62 B LYS 63 n 63 LYS 63 B GLU 64 n 64 GLU 64 B SER 65 n 65 SER 65 B THR 66 n 66 THR 66 B LEU 67 n 67 LEU 67 B HIS 68 n 68 HIS 68 B LEU 69 n 69 LEU 69 B VAL 70 n 70 VAL 70 B LEU 71 n 71 LEU 71 B ARG 72 n 72 ARG 72 B LEU 73 n 73 LEU 73 B ARG 74 n 74 ARG 74 B GLY 75 n 75 GLY 75 B AYE 76 n 76 AYE 76 B author_and_software_defined_assembly PISA 2 dimeric 2060 -7.3 10320 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N ILE 13 A N ILE 13 A O GLN 16 A O GLN 16 A N SER 19 A N SER 19 A O GLY 130 A O GLY 130 A N PHE 133 A N PHE 133 A O ILE 116 A O ILE 116 A N ILE 117 A N ILE 117 A O VAL 142 A O VAL 142 A N SER 147 A N SER 147 A O HIS 151 A O HIS 151 A N ARG 156 A N ARG 156 A O GLU 30 A O GLU 30 A N GLY 100 A N GLY 100 B O GLY 75 B O GLY 75 B N LEU 15 B N LEU 15 B O ILE 3 B O ILE 3 B N LYS 6 B N LYS 6 B O LEU 67 B O LEU 67 B N VAL 70 B N VAL 70 B O ARG 42 B O ARG 42 B N PHE 45 B N PHE 45 B O LYS 48 B O LYS 48 1 A HOH 2017 C HOH 1 A HOH 2030 C HOH 1 A CG ARG 22 A CG ARG 22 1 Y 1 A CD ARG 22 A CD ARG 22 1 Y 1 A NE ARG 22 A NE ARG 22 1 Y 1 A CZ ARG 22 A CZ ARG 22 1 Y 1 A NH1 ARG 22 A NH1 ARG 22 1 Y 1 A NH2 ARG 22 A NH2 ARG 22 1 Y 1 A CG1 ILE 25 A CG1 ILE 25 1 Y 1 A CG2 ILE 25 A CG2 ILE 25 1 Y 1 A CD1 ILE 25 A CD1 ILE 25 1 Y 1 A OG SER 26 A OG SER 26 1 Y 1 A CG LYS 91 A CG LYS 91 1 Y 1 A CD LYS 91 A CD LYS 91 1 Y 1 A CE LYS 91 A CE LYS 91 1 Y 1 A NZ LYS 91 A NZ LYS 91 1 Y 1 A CG ARG 92 A CG ARG 92 1 Y 1 A CD ARG 92 A CD ARG 92 1 Y 1 A NE ARG 92 A NE ARG 92 1 Y 1 A CZ ARG 92 A CZ ARG 92 1 Y 1 A NH1 ARG 92 A NH1 ARG 92 1 Y 1 A NH2 ARG 92 A NH2 ARG 92 1 Y 1 A CG ASP 96 A CG ASP 96 1 Y 1 A OD1 ASP 96 A OD1 ASP 96 1 Y 1 A OD2 ASP 96 A OD2 ASP 96 1 Y 1 A CG ASN 97 A CG ASN 97 1 Y 1 A OD1 ASN 97 A OD1 ASN 97 1 Y 1 A ND2 ASN 97 A ND2 ASN 97 1 Y 1 A CG ASP 125 A CG ASP 125 1 Y 1 A OD1 ASP 125 A OD1 ASP 125 1 Y 1 A OD2 ASP 125 A OD2 ASP 125 1 Y 1 A CG GLU 126 A CG GLU 126 1 Y 1 A CD GLU 126 A CD GLU 126 1 Y 1 A OE1 GLU 126 A OE1 GLU 126 1 Y 1 A OE2 GLU 126 A OE2 GLU 126 1 Y 1 A CG GLU 128 A CG GLU 128 1 Y 1 A CD GLU 128 A CD GLU 128 1 Y 1 A OE1 GLU 128 A OE1 GLU 128 1 Y 1 A OE2 GLU 128 A OE2 GLU 128 1 Y 1 B CG GLU 16 B CG GLU 16 1 Y 1 B CD GLU 16 B CD GLU 16 1 Y 1 B OE1 GLU 16 B OE1 GLU 16 1 Y 1 B OE2 GLU 16 B OE2 GLU 16 1 Y 1 B CG LYS 48 B CG LYS 48 1 Y 1 B CD LYS 48 B CD LYS 48 1 Y 1 B CE LYS 48 B CE LYS 48 1 Y 1 B NZ LYS 48 B NZ LYS 48 1 Y 1 B CG ASN 60 B CG ASN 60 1 Y 1 B OD1 ASN 60 B OD1 ASN 60 1 Y 1 B ND2 ASN 60 B ND2 ASN 60 1 Y 1 B CG GLN 62 B CG GLN 62 1 Y 1 B CD GLN 62 B CD GLN 62 1 Y 1 B OE1 GLN 62 B OE1 GLN 62 1 Y 1 B NE2 GLN 62 B NE2 GLN 62 1 Y 1 B CG LYS 63 B CG LYS 63 1 Y 1 B CD LYS 63 B CD LYS 63 1 Y 1 B CE LYS 63 B CE LYS 63 1 Y 1 B NZ LYS 63 B NZ LYS 63 1 Y 1 B CG GLU 64 B CG GLU 64 1 Y 1 B CD GLU 64 B CD GLU 64 1 Y 1 B OE1 GLU 64 B OE1 GLU 64 1 Y 1 B OE2 GLU 64 B OE2 GLU 64 1 Y 1 A MET 1 A MET 1 1 Y 1 A ASP 2 A ASP 2 1 Y 1 A PHE 3 A PHE 3 1 Y 1 A LEU 4 A LEU 4 1 Y 1 A ARG 5 A ARG 5 1 Y 1 A SER 6 A SER 6 1 Y 1 A ALA 123 A ALA 123 1 Y 1 A SER 124 A SER 124 1 Y 1 A GLU 162 A GLU 162 1 Y 1 A THR 163 A THR 163 1 Y 1 A ASP 164 A ASP 164 1 Y 1 A THR 165 A THR 165 1 Y 1 A ARG 166 A ARG 166 1 Y 1 A GLU 167 A GLU 167 1 Y 1 A ALA 168 A ALA 168 1 Y 1 A LEU 169 A LEU 169 1 Y 1 A SER 170 A SER 170 1 Y 1 A LEU 171 A LEU 171 1 Y 1 A MET 172 A MET 172 1 Y 1 A ASP 173 A ASP 173 1 Y 1 A ARG 174 A ARG 174 1 Y 1 A VAL 175 A VAL 175 1 Y 1 A ILE 176 A ILE 176 1 Y 1 A ALA 177 A ALA 177 1 Y 1 A VAL 178 A VAL 178 1 Y 1 A ASP 179 A ASP 179 1 Y 1 A GLN 180 A GLN 180 1 Y 1 A LEU 181 A LEU 181 1 Y 1 A THR 182 A THR 182 1 Y 1 A SER 183 A SER 183 1 Y 1 A A ASP GLY 37 38 -40.66 1 A A CE2 CD2 TRP TRP 9 9 0.077 0.012 1.409 1.486 N 1 A SER 26 -49.53 -10.78 1 A ASN 97 87.45 -11.35 1 A GLN 149 64.36 -4.43 1 A GLN 160 -66.44 8.34 1 B GLU 64 56.22 16.29 33.362 2.18 1.09 0.00 2.18 0.00 -3.27 0.944 0.913 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT. U VALUES REFINED INDIVIDUALLY. COVALENT LINKS BETWEEN MOLECULE B GLY75,ETHANAMINE76 AND MOLECULE A CYS40 HAVE BEEN REFINED IN REFMAC. DISORDERED RESIDUES WERE MODELLED WITH SIDE CHAINS REMOVED OR MUTATED TO ALA. 0.27465 0.21076 0.21385 2.30 126.48 838 15629 5.1 97.73 6.793 0.161 RANDOM 1 THROUGHOUT MOLECULAR REPLACEMENT 0.232 0.221 0.80 0.80 1.20 PDB ENTRY 3PHW MAXIMUM LIKELIHOOD MASK 2.30 126.48 48 1822 0 0 1774 0.018 0.020 1810 2.029 1.960 2457 7.139 5.000 225 32.036 24.375 80 15.651 15.000 299 18.752 15.000 9 0.122 0.200 281 0.010 0.021 1362 0.335 0.258 2.360 62 995 20 96.44 2.30 53.12 3ZNH 16479 2.0 0.09 1 17.60 4.6 98.6 0.69 2.30 2.42 3.60 1 4.2 97.4 refinement REFMAC 5.6.0117 data reduction MOSFLM data scaling SCALA phasing PHASER Crimean Congo Hemorrhagic Fever Virus OTU domain in complex with ubiquitin-propargyl. 1 N N 2 N N 3 N N 3 N N A ILE 25 A ILE 25 HELX_P A ASP 27 A ASP 27 5 1 3 A ASN 39 A ASN 39 HELX_P A MET 50 A MET 50 1 2 12 A SER 57 A SER 57 HELX_P A TYR 73 A TYR 73 1 3 17 A GLN 74 A GLN 74 HELX_P A PRO 77 A PRO 77 5 4 4 A GLU 78 A GLU 78 HELX_P A GLY 83 A GLY 83 1 5 6 A SER 85 A SER 85 HELX_P A LEU 94 A LEU 94 1 6 10 A THR 102 A THR 102 HELX_P A MET 112 A MET 112 1 7 11 B THR 22 B THR 22 HELX_P B GLY 35 B GLY 35 1 8 14 B PRO 37 B PRO 37 HELX_P B ASP 39 B ASP 39 5 9 3 covale 1.701 none A CYS 40 A SG CYS 40 1_555 B AYE 76 B C2 AYE 76 1_555 covale 1.357 one B GLY 75 B C GLY 75 1_555 B AYE 76 B N1 AYE 76 1_555 HYDROLASE/SIGNALING PROTEIN HYDROLASE-SIGNALING PROTEIN COMPLEX, DEUBIQUITINASE L_CCHFI UNP 1 Q6TQR6 UBB_HUMAN UNP 2 P0CG47 1 183 3ZNH 1 183 Q6TQR6 A 1 1 183 1 76 3ZNH 1 76 P0CG47 B 2 1 76 2 GLY engineered mutation AYE 76 3ZNH B P0CG47 UNP 76 76 7 2 5 anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel A THR 10 A THR 10 A ILE 13 A ILE 13 A GLN 16 A GLN 16 A SER 19 A SER 19 A VAL 127 A VAL 127 A PHE 133 A PHE 133 A ILE 116 A ILE 116 A VAL 121 A VAL 121 A VAL 142 A VAL 142 A SER 147 A SER 147 A HIS 151 A HIS 151 A ILE 157 A ILE 157 A PHE 29 A PHE 29 A VAL 32 A VAL 32 A GLY 100 A GLY 100 A SER 101 A SER 101 B ARG 74 B ARG 74 B GLY 75 B GLY 75 B THR 12 B THR 12 B GLU 16 B GLU 16 B GLN 2 B GLN 2 B LYS 6 B LYS 6 B THR 66 B THR 66 B LEU 71 B LEU 71 B GLN 41 B GLN 41 B PHE 45 B PHE 45 B LYS 48 B LYS 48 B GLN 49 B GLN 49 180 P 62 2 2