0.021998 0.000000 0.000000 0.000000 0.005371 0.000000 0.000000 0.000000 0.008008 0.00000 0.00000 0.00000 James, L.C. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 45.458 186.185 124.875 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C6 H12 O6 180.156 beta-D-mannopyranose D-saccharide, beta linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C6 H12 O5 164.156 alpha-L-fucopyranose L-saccharide, alpha linking C6 H12 O6 180.156 beta-D-galactopyranose D-saccharide, beta linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C6 H12 O6 180.156 alpha-D-mannopyranose D-saccharide, alpha linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C8 H15 N O6 221.208 2-acetamido-2-deoxy-beta-D-glucopyranose D-saccharide, beta linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Proc.Natl.Acad.Sci.USA PNASA6 0040 0027-8424 105 6045 10.1073/PNAS.0800159105 18420815 Trim21 is an Igg Receptor that is Structurally, Thermodynamically, and Kinetically Conserved. 2008 NAG C 1 HAS WRONG CHIRALITY AT ATOM C1 NAG A 1444 IS PLANAR AT ATOM C1 MAN A 1449 IS NOT LINKED TO SACCHARIDE CHAIN FUC A 1451 IS NOT LINKED TO SACCHARIDE CHAIN 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD ADSC CCD SINGLE WAVELENGTH M x-ray 1 0.97 1.0 ID14-3 ESRF 0.97 SYNCHROTRON ESRF BEAMLINE ID14-3 23849.016 IG GAMMA-2A CHAIN C REGION, A ALLELE FC, RESIDUES 120-327 1 nat polymer 20788.518 E3 UBIQUITIN-PROTEIN LIGASE TRIM21 6.3.2.- RESIDUES 291-470 1 man polymer 1114.016 beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 1 man branched 180.156 alpha-D-mannopyranose 1 man non-polymer 164.156 alpha-L-fucopyranose 1 man non-polymer 18.015 water 189 nat water IGG2A, IMMUNOGLOBULIN HEAVY CHAIN GAMMA POLYPEPTIDE TRIM21,52 KDA RO PROTEIN, 52 KDA RIBONUCLEOPROTEIN AUTOANTIGEN RO/SS-A, RO(SS-A), SJOEGREN SYNDROME TYPE A ANTIGEN, SS-A, TRIPARTITE MOTIF-CONTAINING PROTEIN 21 no no GPSVFIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSG KEFKCKVNNKDLPAPIERTISKPKGSVRAPQVYVLPPPEEEMTKKQVTLTCMVTDFMPEDIYVEWTNNGKTELNYKNTEP VLDSDGSYFMYSKLRVEKKNWVERNSYSCSVVHEGLHNHHTTKSFSRS GPSVFIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSG KEFKCKVNNKDLPAPIERTISKPKGSVRAPQVYVLPPPEEEMTKKQVTLTCMVTDFMPEDIYVEWTNNGKTELNYKNTEP VLDSDGSYFMYSKLRVEKKNWVERNSYSCSVVHEGLHNHHTTKSFSRS A polypeptide(L) no no HMVHITLDRNTANSWLIISKDRRQVRMGDTHQNVSDNKERFSNYPMVLGAQRFSSGKMYWEVDVTQKEAWDLGVCRDSVQ RKGQFSLSPENGFWTIWLWQKSYEAGTSPQTTLHIQVPPCQIGIFVDYEAGVVSFYNITDHGSLIYTFSECVFAGPLRPF FNVGFNYSGGNAAPLKLCPLKM HMVHITLDRNTANSWLIISKDRRQVRMGDTHQNVSDNKERFSNYPMVLGAQRFSSGKMYWEVDVTQKEAWDLGVCRDSVQ RKGQFSLSPENGFWTIWLWQKSYEAGTSPQTTLHIQVPPCQIGIFVDYEAGVVSFYNITDHGSLIYTFSECVFAGPLRPF FNVGFNYSGGNAAPLKLCPLKM B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n HOUSE MOUSE sample 10090 MUS MUSCULUS 562 ESCHERICHIA COLI HOUSE MOUSE sample 10090 MUS MUSCULUS 2.96 58.44 NONE atom_site atom_site_anisotrop chem_comp database_PDB_caveat entity pdbx_branch_scheme pdbx_chem_comp_identifier pdbx_database_status pdbx_entity_branch pdbx_entity_branch_descriptor pdbx_entity_branch_link pdbx_entity_branch_list pdbx_entity_nonpoly pdbx_nonpoly_scheme pdbx_struct_assembly_gen pdbx_struct_special_symmetry pdbx_unobs_or_zero_occ_atoms pdbx_validate_chiral pdbx_validate_close_contact struct_asym struct_conn struct_site struct_site_gen repository Initial release Carbohydrate remediation repository Remediation Advisory Atomic model Data collection Derived calculations Other Structure summary 1 0 2013-05-22 2 0 2020-07-29 _atom_site.auth_asym_id _atom_site.auth_seq_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site_anisotrop.pdbx_auth_asym_id _atom_site_anisotrop.pdbx_auth_seq_id _atom_site_anisotrop.pdbx_label_asym_id _chem_comp.name _chem_comp.type _pdbx_database_status.status_code_sf _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_special_symmetry.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.auth_seq_id_2 _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_role _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id A NAG 1444 n C NAG 1 A NAG 1445 n C NAG 2 A BMA 1446 n C BMA 3 A MAN 1447 n C MAN 4 A NAG 1448 n C NAG 5 A GAL 1450 n C GAL 6 DManpb b-D-mannopyranose b-D-Manp Man LFucpa a-L-fucopyranose a-L-Fucp Fuc DGalpb b-D-galactopyranose b-D-Galp Gal DManpa a-D-mannopyranose a-D-Manp Man DGlcpNAcb N-acetyl-b-D-glucopyranosamine b-D-GlcpNAc GlcNAc 2013-05-22 SPRSDE PDBE Y PDBE 2013-02-19 REL REL oligosaccharide DGalpb1-4DGlcpNAcb1-2DManpa1-6DManpb1-4DGlcpNAcb1-4DGlcpNAcb1- 3 GMML 1.0 Glycam Condensed Sequence WURCS=2.0/4,6,5/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a2112h-1b_1-5]/1-1-2-3-1-4/a4-b1_b4-c1_c6-d1_d2-e1_e4-f1 3 PDB2Glycan 1.1.0 WURCS []{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(6+1)][a-D-Manp]{[(2+1)][b-D-GlcpNAc]{[(4+1)][b-D-Galp]{}}}}}}} 3 PDB-CARE LINUCS C1 O4 NAG NAG 2 1 3 O1 HO4 sing C1 O4 BMA NAG 3 2 3 O1 HO4 sing C1 O6 MAN BMA 4 3 3 O1 HO6 sing C1 O2 NAG MAN 5 4 3 O1 HO2 sing C1 O4 GAL NAG 6 5 3 O1 HO4 sing n n n n n n MAN alpha-D-mannopyranose FUC alpha-L-fucopyranose HOH water MAN 1449 4 MAN MAN 1449 A FUC 1451 5 FUC FUC 1451 A HOH 2001 6 HOH HOH 2001 A HOH 2002 6 HOH HOH 2002 A HOH 2003 6 HOH HOH 2003 A HOH 2004 6 HOH HOH 2004 A HOH 2005 6 HOH HOH 2005 A HOH 2006 6 HOH HOH 2006 A HOH 2007 6 HOH HOH 2007 A HOH 2008 6 HOH HOH 2008 A HOH 2009 6 HOH HOH 2009 A HOH 2010 6 HOH HOH 2010 A HOH 2011 6 HOH HOH 2011 A HOH 2012 6 HOH HOH 2012 A HOH 2013 6 HOH HOH 2013 A HOH 2014 6 HOH HOH 2014 A HOH 2015 6 HOH HOH 2015 A HOH 2016 6 HOH HOH 2016 A HOH 2017 6 HOH HOH 2017 A HOH 2018 6 HOH HOH 2018 A HOH 2019 6 HOH HOH 2019 A HOH 2020 6 HOH HOH 2020 A HOH 2021 6 HOH HOH 2021 A HOH 2022 6 HOH HOH 2022 A HOH 2023 6 HOH HOH 2023 A HOH 2024 6 HOH HOH 2024 A HOH 2025 6 HOH HOH 2025 A HOH 2026 6 HOH HOH 2026 A HOH 2027 6 HOH HOH 2027 A HOH 2028 6 HOH HOH 2028 A HOH 2029 6 HOH HOH 2029 A HOH 2030 6 HOH HOH 2030 A HOH 2031 6 HOH HOH 2031 A HOH 2032 6 HOH HOH 2032 A HOH 2033 6 HOH HOH 2033 A HOH 2034 6 HOH HOH 2034 A HOH 2035 6 HOH HOH 2035 A HOH 2036 6 HOH HOH 2036 A HOH 2037 6 HOH HOH 2037 A HOH 2038 6 HOH HOH 2038 A HOH 2039 6 HOH HOH 2039 A HOH 2040 6 HOH HOH 2040 A HOH 2041 6 HOH HOH 2041 A HOH 2042 6 HOH HOH 2042 A HOH 2043 6 HOH HOH 2043 A HOH 2044 6 HOH HOH 2044 A HOH 2045 6 HOH HOH 2045 A HOH 2046 6 HOH HOH 2046 A HOH 2047 6 HOH HOH 2047 A HOH 2048 6 HOH HOH 2048 A HOH 2049 6 HOH HOH 2049 A HOH 2050 6 HOH HOH 2050 A HOH 2051 6 HOH HOH 2051 A HOH 2052 6 HOH HOH 2052 A HOH 2053 6 HOH HOH 2053 A HOH 2054 6 HOH HOH 2054 A HOH 2055 6 HOH HOH 2055 A HOH 2056 6 HOH HOH 2056 A HOH 2057 6 HOH HOH 2057 A HOH 2058 6 HOH HOH 2058 A HOH 2059 6 HOH HOH 2059 A HOH 2060 6 HOH HOH 2060 A HOH 2061 6 HOH HOH 2061 A HOH 2062 6 HOH HOH 2062 A HOH 2063 6 HOH HOH 2063 A HOH 2064 6 HOH HOH 2064 A HOH 2065 6 HOH HOH 2065 A HOH 2066 6 HOH HOH 2066 A HOH 2067 6 HOH HOH 2067 A HOH 2068 6 HOH HOH 2068 A HOH 2069 6 HOH HOH 2069 A HOH 2070 6 HOH HOH 2070 A HOH 2071 6 HOH HOH 2071 A HOH 2072 6 HOH HOH 2072 A HOH 2073 6 HOH HOH 2073 A HOH 2074 6 HOH HOH 2074 A HOH 2075 6 HOH HOH 2075 A HOH 2076 6 HOH HOH 2076 A HOH 2077 6 HOH HOH 2077 A HOH 2078 6 HOH HOH 2078 A HOH 2079 6 HOH HOH 2079 A HOH 2080 6 HOH HOH 2080 A HOH 2081 6 HOH HOH 2081 A HOH 2082 6 HOH HOH 2082 A HOH 2083 6 HOH HOH 2083 A HOH 2084 6 HOH HOH 2084 A HOH 2085 6 HOH HOH 2085 A HOH 2086 6 HOH HOH 2086 A HOH 2087 6 HOH HOH 2087 A HOH 2088 6 HOH HOH 2088 A HOH 2089 6 HOH HOH 2089 A HOH 2090 6 HOH HOH 2090 A HOH 2091 6 HOH HOH 2091 A HOH 2092 6 HOH HOH 2092 A HOH 2093 6 HOH HOH 2093 A HOH 2094 6 HOH HOH 2094 A HOH 2001 6 HOH HOH 2001 B HOH 2002 6 HOH HOH 2002 B HOH 2003 6 HOH HOH 2003 B HOH 2004 6 HOH HOH 2004 B HOH 2005 6 HOH HOH 2005 B HOH 2006 6 HOH HOH 2006 B HOH 2007 6 HOH HOH 2007 B HOH 2008 6 HOH HOH 2008 B HOH 2009 6 HOH HOH 2009 B HOH 2010 6 HOH HOH 2010 B HOH 2011 6 HOH HOH 2011 B HOH 2012 6 HOH HOH 2012 B HOH 2013 6 HOH HOH 2013 B HOH 2014 6 HOH HOH 2014 B HOH 2015 6 HOH HOH 2015 B HOH 2016 6 HOH HOH 2016 B HOH 2017 6 HOH HOH 2017 B HOH 2018 6 HOH HOH 2018 B HOH 2019 6 HOH HOH 2019 B HOH 2020 6 HOH HOH 2020 B HOH 2021 6 HOH HOH 2021 B HOH 2022 6 HOH HOH 2022 B HOH 2023 6 HOH HOH 2023 B HOH 2024 6 HOH HOH 2024 B HOH 2025 6 HOH HOH 2025 B HOH 2026 6 HOH HOH 2026 B HOH 2027 6 HOH HOH 2027 B HOH 2028 6 HOH HOH 2028 B HOH 2029 6 HOH HOH 2029 B HOH 2030 6 HOH HOH 2030 B HOH 2031 6 HOH HOH 2031 B HOH 2032 6 HOH HOH 2032 B HOH 2033 6 HOH HOH 2033 B HOH 2034 6 HOH HOH 2034 B HOH 2035 6 HOH HOH 2035 B HOH 2036 6 HOH HOH 2036 B HOH 2037 6 HOH HOH 2037 B HOH 2038 6 HOH HOH 2038 B HOH 2039 6 HOH HOH 2039 B HOH 2040 6 HOH HOH 2040 B HOH 2041 6 HOH HOH 2041 B HOH 2042 6 HOH HOH 2042 B HOH 2043 6 HOH HOH 2043 B HOH 2044 6 HOH HOH 2044 B HOH 2045 6 HOH HOH 2045 B HOH 2046 6 HOH HOH 2046 B HOH 2047 6 HOH HOH 2047 B HOH 2048 6 HOH HOH 2048 B HOH 2049 6 HOH HOH 2049 B HOH 2050 6 HOH HOH 2050 B HOH 2051 6 HOH HOH 2051 B HOH 2052 6 HOH HOH 2052 B HOH 2053 6 HOH HOH 2053 B HOH 2054 6 HOH HOH 2054 B HOH 2055 6 HOH HOH 2055 B HOH 2056 6 HOH HOH 2056 B HOH 2057 6 HOH HOH 2057 B HOH 2058 6 HOH HOH 2058 B HOH 2059 6 HOH HOH 2059 B HOH 2060 6 HOH HOH 2060 B HOH 2061 6 HOH HOH 2061 B HOH 2062 6 HOH HOH 2062 B HOH 2063 6 HOH HOH 2063 B HOH 2064 6 HOH HOH 2064 B HOH 2065 6 HOH HOH 2065 B HOH 2066 6 HOH HOH 2066 B HOH 2067 6 HOH HOH 2067 B HOH 2068 6 HOH HOH 2068 B HOH 2069 6 HOH HOH 2069 B HOH 2070 6 HOH HOH 2070 B HOH 2071 6 HOH HOH 2071 B HOH 2072 6 HOH HOH 2072 B HOH 2073 6 HOH HOH 2073 B HOH 2074 6 HOH HOH 2074 B HOH 2075 6 HOH HOH 2075 B HOH 2076 6 HOH HOH 2076 B HOH 2077 6 HOH HOH 2077 B HOH 2078 6 HOH HOH 2078 B HOH 2079 6 HOH HOH 2079 B HOH 2080 6 HOH HOH 2080 B HOH 2081 6 HOH HOH 2081 B HOH 2082 6 HOH HOH 2082 B HOH 2083 6 HOH HOH 2083 B HOH 2084 6 HOH HOH 2084 B HOH 2085 6 HOH HOH 2085 B HOH 2086 6 HOH HOH 2086 B HOH 2087 6 HOH HOH 2087 B HOH 2088 6 HOH HOH 2088 B HOH 2089 6 HOH HOH 2089 B HOH 2090 6 HOH HOH 2090 B HOH 2091 6 HOH HOH 2091 B HOH 2092 6 HOH HOH 2092 B HOH 2093 6 HOH HOH 2093 B HOH 2094 6 HOH HOH 2094 B HOH 2095 6 HOH HOH 2095 B GLY 237 n 1 GLY 237 A PRO 238 n 2 PRO 238 A SER 239 n 3 SER 239 A VAL 240 n 4 VAL 240 A PHE 241 n 5 PHE 241 A ILE 242 n 6 ILE 242 A PHE 243 n 7 PHE 243 A PRO 244 n 8 PRO 244 A PRO 245 n 9 PRO 245 A LYS 246 n 10 LYS 246 A ILE 247 n 11 ILE 247 A LYS 248 n 12 LYS 248 A ASP 249 n 13 ASP 249 A VAL 250 n 14 VAL 250 A LEU 251 n 15 LEU 251 A MET 252 n 16 MET 252 A ILE 253 n 17 ILE 253 A SER 254 n 18 SER 254 A LEU 255 n 19 LEU 255 A SER 256 n 20 SER 256 A PRO 257 n 21 PRO 257 A ILE 258 n 22 ILE 258 A VAL 259 n 23 VAL 259 A THR 260 n 24 THR 260 A CYS 261 n 25 CYS 261 A VAL 262 n 26 VAL 262 A VAL 263 n 27 VAL 263 A VAL 264 n 28 VAL 264 A ASP 265 n 29 ASP 265 A VAL 266 n 30 VAL 266 A SER 267 n 31 SER 267 A GLU 268 n 32 GLU 268 A ASP 269 n 33 ASP 269 A ASP 270 n 34 ASP 270 A PRO 271 n 35 PRO 271 A ASP 272 n 36 ASP 272 A VAL 273 n 37 VAL 273 A GLN 274 n 38 GLN 274 A ILE 275 n 39 ILE 275 A SER 276 n 40 SER 276 A TRP 277 n 41 TRP 277 A PHE 278 n 42 PHE 278 A VAL 279 n 43 VAL 279 A ASN 280 n 44 ASN 280 A ASN 281 n 45 ASN 281 A VAL 282 n 46 VAL 282 A GLU 283 n 47 GLU 283 A VAL 284 n 48 VAL 284 A HIS 285 n 49 HIS 285 A THR 286 n 50 THR 286 A ALA 287 n 51 ALA 287 A GLN 288 n 52 GLN 288 A THR 289 n 53 THR 289 A GLN 290 n 54 GLN 290 A THR 291 n 55 THR 291 A HIS 292 n 56 HIS 292 A ARG 293 n 57 ARG 293 A GLU 294 n 58 GLU 294 A ASP 295 n 59 ASP 295 A TYR 296 n 60 TYR 296 A ASN 297 n 61 ASN 297 A SER 298 n 62 SER 298 A THR 299 n 63 THR 299 A LEU 300 n 64 LEU 300 A ARG 301 n 65 ARG 301 A VAL 302 n 66 VAL 302 A VAL 303 n 67 VAL 303 A SER 304 n 68 SER 304 A ALA 305 n 69 ALA 305 A LEU 306 n 70 LEU 306 A PRO 307 n 71 PRO 307 A ILE 308 n 72 ILE 308 A GLN 309 n 73 GLN 309 A HIS 310 n 74 HIS 310 A GLN 311 n 75 GLN 311 A ASP 312 n 76 ASP 312 A TRP 313 n 77 TRP 313 A MET 314 n 78 MET 314 A SER 315 n 79 SER 315 A GLY 316 n 80 GLY 316 A LYS 317 n 81 LYS 317 A GLU 318 n 82 GLU 318 A PHE 319 n 83 PHE 319 A LYS 320 n 84 LYS 320 A CYS 321 n 85 CYS 321 A LYS 322 n 86 LYS 322 A VAL 323 n 87 VAL 323 A ASN 324 n 88 ASN 324 A ASN 325 n 89 ASN 325 A LYS 326 n 90 LYS 326 A ASP 327 n 91 ASP 327 A LEU 328 n 92 LEU 328 A PRO 329 n 93 PRO 329 A ALA 330 n 94 ALA 330 A PRO 331 n 95 PRO 331 A ILE 332 n 96 ILE 332 A GLU 333 n 97 GLU 333 A ARG 334 n 98 ARG 334 A THR 335 n 99 THR 335 A ILE 336 n 100 ILE 336 A SER 337 n 101 SER 337 A LYS 338 n 102 LYS 338 A PRO 339 n 103 PRO 339 A LYS 340 n 104 LYS 340 A GLY 341 n 105 GLY 341 A SER 342 n 106 SER 342 A VAL 343 n 107 VAL 343 A ARG 344 n 108 ARG 344 A ALA 345 n 109 ALA 345 A PRO 346 n 110 PRO 346 A GLN 347 n 111 GLN 347 A VAL 348 n 112 VAL 348 A TYR 349 n 113 TYR 349 A VAL 350 n 114 VAL 350 A LEU 351 n 115 LEU 351 A PRO 352 n 116 PRO 352 A PRO 353 n 117 PRO 353 A PRO 354 n 118 PRO 354 A GLU 355 n 119 GLU 355 A GLU 356 n 120 GLU 356 A GLU 357 n 121 GLU 357 A MET 358 n 122 MET 358 A THR 359 n 123 THR 359 A LYS 360 n 124 LYS 360 A LYS 361 n 125 LYS 361 A GLN 362 n 126 GLN 362 A VAL 363 n 127 VAL 363 A THR 364 n 128 THR 364 A LEU 365 n 129 LEU 365 A THR 366 n 130 THR 366 A CYS 367 n 131 CYS 367 A MET 368 n 132 MET 368 A VAL 369 n 133 VAL 369 A THR 370 n 134 THR 370 A ASP 371 n 135 ASP 371 A PHE 372 n 136 PHE 372 A MET 373 n 137 MET 373 A PRO 374 n 138 PRO 374 A GLU 375 n 139 GLU 375 A ASP 376 n 140 ASP 376 A ILE 377 n 141 ILE 377 A TYR 378 n 142 TYR 378 A VAL 379 n 143 VAL 379 A GLU 380 n 144 GLU 380 A TRP 381 n 145 TRP 381 A THR 382 n 146 THR 382 A ASN 383 n 147 ASN 383 A ASN 384 n 148 ASN 384 A GLY 385 n 149 GLY 385 A LYS 386 n 150 LYS 386 A THR 387 n 151 THR 387 A GLU 388 n 152 GLU 388 A LEU 389 n 153 LEU 389 A ASN 390 n 154 ASN 390 A TYR 391 n 155 TYR 391 A LYS 392 n 156 LYS 392 A ASN 393 n 157 ASN 393 A THR 394 n 158 THR 394 A GLU 395 n 159 GLU 395 A PRO 396 n 160 PRO 396 A VAL 397 n 161 VAL 397 A LEU 398 n 162 LEU 398 A ASP 399 n 163 ASP 399 A SER 400 n 164 SER 400 A ASP 401 n 165 ASP 401 A GLY 402 n 166 GLY 402 A SER 403 n 167 SER 403 A TYR 404 n 168 TYR 404 A PHE 405 n 169 PHE 405 A MET 406 n 170 MET 406 A TYR 407 n 171 TYR 407 A SER 408 n 172 SER 408 A LYS 409 n 173 LYS 409 A LEU 410 n 174 LEU 410 A ARG 411 n 175 ARG 411 A VAL 412 n 176 VAL 412 A GLU 413 n 177 GLU 413 A LYS 414 n 178 LYS 414 A LYS 415 n 179 LYS 415 A ASN 416 n 180 ASN 416 A TRP 417 n 181 TRP 417 A VAL 418 n 182 VAL 418 A GLU 419 n 183 GLU 419 A ARG 420 n 184 ARG 420 A ASN 421 n 185 ASN 421 A SER 422 n 186 SER 422 A TYR 423 n 187 TYR 423 A SER 424 n 188 SER 424 A CYS 425 n 189 CYS 425 A SER 426 n 190 SER 426 A VAL 427 n 191 VAL 427 A VAL 428 n 192 VAL 428 A HIS 429 n 193 HIS 429 A GLU 430 n 194 GLU 430 A GLY 431 n 195 GLY 431 A LEU 432 n 196 LEU 432 A HIS 433 n 197 HIS 433 A ASN 434 n 198 ASN 434 A HIS 435 n 199 HIS 435 A HIS 436 n 200 HIS 436 A THR 437 n 201 THR 437 A THR 438 n 202 THR 438 A LYS 439 n 203 LYS 439 A SER 440 n 204 SER 440 A PHE 441 n 205 PHE 441 A SER 442 n 206 SER 442 A ARG 443 n 207 ARG 443 A SER 444 n 208 SER 444 A HIS 7 n 1 HIS 7 B MET 8 n 2 MET 8 B VAL 9 n 3 VAL 9 B HIS 10 n 4 HIS 10 B ILE 11 n 5 ILE 11 B THR 12 n 6 THR 12 B LEU 13 n 7 LEU 13 B ASP 14 n 8 ASP 14 B ARG 15 n 9 ARG 15 B ASN 16 n 10 ASN 16 B THR 17 n 11 THR 17 B ALA 18 n 12 ALA 18 B ASN 19 n 13 ASN 19 B SER 20 n 14 SER 20 B TRP 21 n 15 TRP 21 B LEU 22 n 16 LEU 22 B ILE 23 n 17 ILE 23 B ILE 24 n 18 ILE 24 B SER 25 n 19 SER 25 B LYS 26 n 20 LYS 26 B ASP 27 n 21 ASP 27 B ARG 28 n 22 ARG 28 B ARG 29 n 23 ARG 29 B GLN 30 n 24 GLN 30 B VAL 31 n 25 VAL 31 B ARG 32 n 26 ARG 32 B MET 33 n 27 MET 33 B GLY 34 n 28 GLY 34 B ASP 35 n 29 ASP 35 B THR 36 n 30 THR 36 B HIS 37 n 31 HIS 37 B GLN 38 n 32 GLN 38 B ASN 39 n 33 ASN 39 B VAL 40 n 34 VAL 40 B SER 41 n 35 SER 41 B ASP 42 n 36 ASP 42 B ASN 43 n 37 ASN 43 B LYS 44 n 38 LYS 44 B GLU 45 n 39 GLU 45 B ARG 46 n 40 ARG 46 B PHE 47 n 41 PHE 47 B SER 48 n 42 SER 48 B ASN 49 n 43 ASN 49 B TYR 50 n 44 TYR 50 B PRO 51 n 45 PRO 51 B MET 52 n 46 MET 52 B VAL 53 n 47 VAL 53 B LEU 54 n 48 LEU 54 B GLY 55 n 49 GLY 55 B ALA 56 n 50 ALA 56 B GLN 57 n 51 GLN 57 B ARG 58 n 52 ARG 58 B PHE 59 n 53 PHE 59 B SER 60 n 54 SER 60 B SER 61 n 55 SER 61 B GLY 62 n 56 GLY 62 B LYS 63 n 57 LYS 63 B MET 64 n 58 MET 64 B TYR 65 n 59 TYR 65 B TRP 66 n 60 TRP 66 B GLU 67 n 61 GLU 67 B VAL 68 n 62 VAL 68 B ASP 69 n 63 ASP 69 B VAL 70 n 64 VAL 70 B THR 71 n 65 THR 71 B GLN 72 n 66 GLN 72 B LYS 73 n 67 LYS 73 B GLU 74 n 68 GLU 74 B ALA 75 n 69 ALA 75 B TRP 76 n 70 TRP 76 B ASP 77 n 71 ASP 77 B LEU 78 n 72 LEU 78 B GLY 79 n 73 GLY 79 B VAL 80 n 74 VAL 80 B CYS 81 n 75 CYS 81 B ARG 82 n 76 ARG 82 B ASP 83 n 77 ASP 83 B SER 84 n 78 SER 84 B VAL 85 n 79 VAL 85 B GLN 86 n 80 GLN 86 B ARG 87 n 81 ARG 87 B LYS 88 n 82 LYS 88 B GLY 89 n 83 GLY 89 B GLN 90 n 84 GLN 90 B PHE 91 n 85 PHE 91 B SER 92 n 86 SER 92 B LEU 93 n 87 LEU 93 B SER 94 n 88 SER 94 B PRO 95 n 89 PRO 95 B GLU 96 n 90 GLU 96 B ASN 97 n 91 ASN 97 B GLY 98 n 92 GLY 98 B PHE 99 n 93 PHE 99 B TRP 100 n 94 TRP 100 B THR 101 n 95 THR 101 B ILE 102 n 96 ILE 102 B TRP 103 n 97 TRP 103 B LEU 104 n 98 LEU 104 B TRP 105 n 99 TRP 105 B GLN 106 n 100 GLN 106 B LYS 107 n 101 LYS 107 B SER 108 n 102 SER 108 B TYR 109 n 103 TYR 109 B GLU 110 n 104 GLU 110 B ALA 111 n 105 ALA 111 B GLY 112 n 106 GLY 112 B THR 113 n 107 THR 113 B SER 114 n 108 SER 114 B PRO 115 n 109 PRO 115 B GLN 116 n 110 GLN 116 B THR 117 n 111 THR 117 B THR 118 n 112 THR 118 B LEU 119 n 113 LEU 119 B HIS 120 n 114 HIS 120 B ILE 121 n 115 ILE 121 B GLN 122 n 116 GLN 122 B VAL 123 n 117 VAL 123 B PRO 124 n 118 PRO 124 B PRO 125 n 119 PRO 125 B CYS 126 n 120 CYS 126 B GLN 127 n 121 GLN 127 B ILE 128 n 122 ILE 128 B GLY 129 n 123 GLY 129 B ILE 130 n 124 ILE 130 B PHE 131 n 125 PHE 131 B VAL 132 n 126 VAL 132 B ASP 133 n 127 ASP 133 B TYR 134 n 128 TYR 134 B GLU 135 n 129 GLU 135 B ALA 136 n 130 ALA 136 B GLY 137 n 131 GLY 137 B VAL 138 n 132 VAL 138 B VAL 139 n 133 VAL 139 B SER 140 n 134 SER 140 B PHE 141 n 135 PHE 141 B TYR 142 n 136 TYR 142 B ASN 143 n 137 ASN 143 B ILE 144 n 138 ILE 144 B THR 145 n 139 THR 145 B ASP 146 n 140 ASP 146 B HIS 147 n 141 HIS 147 B GLY 148 n 142 GLY 148 B SER 149 n 143 SER 149 B LEU 150 n 144 LEU 150 B ILE 151 n 145 ILE 151 B TYR 152 n 146 TYR 152 B THR 153 n 147 THR 153 B PHE 154 n 148 PHE 154 B SER 155 n 149 SER 155 B GLU 156 n 150 GLU 156 B CYS 157 n 151 CYS 157 B VAL 158 n 152 VAL 158 B PHE 159 n 153 PHE 159 B ALA 160 n 154 ALA 160 B GLY 161 n 155 GLY 161 B PRO 162 n 156 PRO 162 B LEU 163 n 157 LEU 163 B ARG 164 n 158 ARG 164 B PRO 165 n 159 PRO 165 B PHE 166 n 160 PHE 166 B PHE 167 n 161 PHE 167 B ASN 168 n 162 ASN 168 B VAL 169 n 163 VAL 169 B GLY 170 n 164 GLY 170 B PHE 171 n 165 PHE 171 B ASN 172 n 166 ASN 172 B TYR 173 n 167 TYR 173 B SER 174 n 168 SER 174 B GLY 175 n 169 GLY 175 B GLY 176 n 170 GLY 176 B ASN 177 n 171 ASN 177 B ALA 178 n 172 ALA 178 B ALA 179 n 173 ALA 179 B PRO 180 n 174 PRO 180 B LEU 181 n 175 LEU 181 B LYS 182 n 176 LYS 182 B LEU 183 n 177 LEU 183 B CYS 184 n 178 CYS 184 B PRO 185 n 179 PRO 185 B LEU 186 n 180 LEU 186 B n 181 187 B n 182 188 B 0.0587 0.1378 -0.0774 0.3467 -0.1250 0.5843 0.0219 0.0123 0.0148 0.0452 0.0144 0.0303 0.0195 -0.0709 -0.0364 0.0235 0.0011 0.0140 0.0335 -0.0072 0.0362 refined 15.7215 14.3752 -20.5431 X-RAY DIFFRACTION 0.3958 -0.0624 0.1006 0.6935 0.1782 0.8381 -0.0235 -0.0235 -0.0209 0.0757 -0.0195 0.0314 0.0573 -0.0396 0.0430 0.0118 -0.0005 0.0097 0.0417 -0.0079 0.0513 refined 15.6532 33.5096 5.1796 X-RAY DIFFRACTION A 237 A 1451 X-RAY DIFFRACTION 1 B 7 B 186 X-RAY DIFFRACTION 2 author_and_software_defined_assembly PISA 4 tetrameric 6730 -37.8 44310 A ASN 297 GLYCOSYLATION SITE A ASN 61 ASN 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 3_654 -x+1,y,-z-1/2 crystal symmetry operation 45.4580000000 0.0000000000 -62.4375000000 A N PHE 243 A N PHE 7 A O THR 260 A O THR 24 A N VAL 266 A N VAL 30 A O LEU 300 A O LEU 64 A N ALA 305 A N ALA 69 A O GLN 288 A O GLN 52 A N VAL 284 A N VAL 48 A O TRP 277 A O TRP 41 A N PHE 278 A N PHE 42 A O LYS 320 A O LYS 84 A N VAL 323 A N VAL 87 A O ILE 332 A O ILE 96 A N LEU 351 A N LEU 115 A O THR 366 A O THR 130 A N PHE 372 A N PHE 136 A O TYR 404 A O TYR 168 A N PHE 405 A N PHE 169 A O VAL 397 A O VAL 161 A N LEU 351 A N LEU 115 A O THR 366 A O THR 130 A N PHE 372 A N PHE 136 A O TYR 404 A O TYR 168 A N LYS 409 A N LYS 173 A O LYS 392 A O LYS 156 A N VAL 397 A N VAL 161 A O PHE 405 A O PHE 169 A N LYS 386 A N LYS 150 A O ASN 383 A O ASN 147 A N THR 382 A N THR 146 A O SER 424 A O SER 188 A N VAL 427 A N VAL 191 A O THR 437 A O THR 201 B N ILE 23 B N ILE 17 B O ARG 32 B O ARG 26 B N VAL 31 B N VAL 25 B O LEU 181 B O LEU 175 B N LYS 182 B N LYS 176 B O ASP 69 B O ASP 63 B N VAL 68 B N VAL 62 B O ILE 128 B O ILE 122 B N ASP 133 B N ASP 127 B O VAL 138 B O VAL 132 B N ASN 143 B N ASN 137 B O SER 149 B O SER 143 B N VAL 53 B N VAL 47 B O PHE 167 B O PHE 161 B N ASN 168 B N ASN 162 B O ASP 77 B O ASP 71 B N VAL 80 B N VAL 74 B O TRP 100 B O TRP 94 B N TRP 105 B N TRP 99 B O SER 108 B O SER 102 B N ALA 111 B N ALA 105 B O THR 117 B O THR 111 1 A HOH 2075 F HOH 1 A HOH 2086 F HOH 1 A O1 MAN 1449 D O1 MAN 1 1 N 1 A O1 FUC 1451 E O1 FUC 1 1 N 1 B LYS 187 B LYS 181 1 Y 1 B MET 188 B MET 182 1 Y 1 C C1 NAG 1 PLANAR 1 A A O3 O FUC HOH 1451 2093 0.30 1 A A C3 O FUC HOH 1451 2093 1.65 1 A C ND2 O5 ASN NAG 297 1 1.79 1 B B O O HOH HOH 2002 2030 1.89 1 A A O O HOH HOH 2036 2092 2.08 1 C A O3 O5 BMA MAN 3 1449 2.09 1 A A O N GLN HIS 290 292 2.19 1 -16.06 2.00 110.40 94.34 A A A CB CA C ASN ASN ASN 297 297 297 N 1 6.40 0.90 118.30 124.70 A A A CB CG OD1 ASP ASP ASP 376 376 376 N 1 -9.18 0.90 118.30 109.12 A A A CB CG OD2 ASP ASP ASP 376 376 376 N 1 5.73 0.90 118.30 124.03 B B B CB CG OD1 ASP ASP ASP 77 77 77 N 1 -11.90 1.90 111.40 99.50 B B B CB CA C VAL VAL VAL 80 80 80 N 1 B B CD OE2 GLU GLU 96 96 0.095 0.011 1.252 1.347 N 1 A THR 291 -40.23 75.25 1 A HIS 292 11.41 78.65 1 A TYR 296 -28.80 -65.00 1 A ASN 297 -26.50 -4.37 1 A PRO 329 -57.04 -1.38 1 A ALA 330 173.90 159.71 1 A THR 359 -119.73 79.16 1 A ASN 390 -105.34 68.66 1 A VAL 418 -80.65 -89.64 1 A ARG 420 24.79 -117.96 1 A ASN 421 58.51 140.64 1 A PHE 441 177.50 -171.92 1 A ARG 443 -21.98 115.44 1 B ASN 39 72.98 60.71 1 B ASP 146 -103.89 49.40 1 B GLU 156 39.95 46.38 1 B PRO 185 -39.71 101.25 36.524 -0.14 0.00 0.00 0.17 0.00 -0.03 0.958 0.921 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.25251 0.18132 0.18474 1.99 44.15 1798 34168 5.0 97.94 9.680 0.118 RANDOM 1 THROUGHOUT OTHER 0.364 0.163 0.80 0.80 1.20 NONE MAXIMUM LIKELIHOOD BABINET MODEL WITH MASK 1.99 44.15 189 3405 96 0 3120 0.018 0.019 3311 0.002 0.020 3035 2.236 1.969 4516 2.046 3.001 6980 7.864 5.000 386 32.914 24.342 152 18.575 15.000 533 18.779 15.000 16 0.192 0.200 511 0.009 0.021 3640 0.009 0.020 760 5.643 3.315 1550 5.640 3.312 1549 6.321 4.954 1934 6.337 4.959 1935 6.347 3.840 1761 6.346 3.841 1762 7.123 5.529 2583 7.493 28.596 3868 7.477 28.448 3819 11.758 3.000 6346 29.817 5.000 63 14.664 5.000 6377 0.291 0.215 2.046 143 2370 20 94.12 2.00 44.00 3ZO0 36717 2.0 0.06 1 8.00 2.5 97.0 refinement REFMAC 5.7.0032 IG GAMMA-2A CHAIN C REGION, A ALLELE, E3 UBIQUITIN-PROTEIN LIGASE TRIM21 (E.C.6.3.2.-) Mouse IgG2a in complex with mouse TRIM21 PRYSPRY 1 N N 2 N N 3 N N 4 N N 5 N N 6 N N 6 N N A LYS 246 A LYS 10 HELX_P A MET 252 A MET 16 1 1 7 A GLN 309 A GLN 73 HELX_P A SER 315 A SER 79 1 2 7 A PRO 354 A PRO 118 HELX_P A THR 359 A THR 123 5 3 6 A LYS 414 A LYS 178 HELX_P A GLU 419 A GLU 183 1 4 6 A LEU 432 A LEU 196 HELX_P A ASN 434 A ASN 198 5 5 3 B ASP 14 B ASP 8 HELX_P B ALA 18 B ALA 12 5 6 5 B SER 94 B SER 88 HELX_P B ASN 97 B ASN 91 5 7 4 disulf 2.050 A CYS 261 A SG CYS 25 1_555 A CYS 321 A SG CYS 85 1_555 disulf 2.004 A CYS 367 A SG CYS 131 1_555 A CYS 425 A SG CYS 189 1_555 covale 1.259 one N-Glycosylation A ASN 297 A ND2 ASN 61 1_555 C NAG 1 C C1 NAG 1_555 covale 1.409 both C NAG 1 C O4 NAG 1_555 C NAG 2 C C1 NAG 1_555 covale 1.423 both C NAG 2 C O4 NAG 1_555 C BMA 3 C C1 BMA 1_555 covale 1.406 both C BMA 3 C O6 BMA 1_555 C MAN 4 C C1 MAN 1_555 covale 1.417 both C MAN 4 C O2 MAN 1_555 C NAG 5 C C1 NAG 1_555 covale 1.428 both C NAG 5 C O4 NAG 1_555 C GAL 6 C C1 GAL 1_555 IMMUNE SYSTEM/LIGASE IMMUNE SYSTEM-LIGASE COMPLEX A MET 373 A MET 137 1 A PRO 374 A PRO 138 -6.50 B SER 114 B SER 108 1 B PRO 115 B PRO 109 -6.28 GCAA_MOUSE UNP 1 P01863 RO52_MOUSE UNP 2 Q62191 120 327 3ZO0 237 444 P01863 A 1 1 208 291 470 3ZO0 9 188 Q62191 B 2 3 182 1 THR conflict SER 444 3ZO0 A P01863 UNP 327 208 2 expression tag HIS 7 3ZO0 B Q62191 UNP 1 2 expression tag MET 8 3ZO0 B Q62191 UNP 2 2 ASP conflict LYS 107 3ZO0 B Q62191 UNP 389 101 4 4 4 4 2 4 7 6 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A SER 239 A SER 3 A PHE 243 A PHE 7 A ILE 258 A ILE 22 A VAL 266 A VAL 30 A THR 299 A THR 63 A PRO 307 A PRO 71 A GLN 288 A GLN 52 A ASP 295 A ASP 59 A VAL 282 A VAL 46 A VAL 284 A VAL 48 A GLN 274 A GLN 38 A VAL 279 A VAL 43 A PHE 319 A PHE 83 A ASN 324 A ASN 88 A ILE 332 A ILE 96 A ILE 336 A ILE 100 A GLN 347 A GLN 111 A LEU 351 A LEU 115 A GLN 362 A GLN 126 A PHE 372 A PHE 136 A TYR 404 A TYR 168 A GLU 413 A GLU 177 A VAL 397 A VAL 161 A LEU 398 A LEU 162 A GLN 347 A GLN 111 A LEU 351 A LEU 115 A GLN 362 A GLN 126 A PHE 372 A PHE 136 A TYR 404 A TYR 168 A GLU 413 A GLU 177 A TYR 391 A TYR 155 A ASN 393 A ASN 157 A VAL 397 A VAL 161 A LEU 398 A LEU 162 A TYR 404 A TYR 168 A GLU 413 A GLU 177 A LYS 386 A LYS 150 A THR 387 A THR 151 A TYR 378 A TYR 142 A ASN 383 A ASN 147 A TYR 423 A TYR 187 A VAL 428 A VAL 192 A HIS 436 A HIS 200 A PHE 441 A PHE 205 B LEU 22 B LEU 16 B ILE 24 B ILE 18 B GLN 30 B GLN 24 B MET 33 B MET 27 B LEU 181 B LEU 175 B LEU 183 B LEU 177 B LYS 63 B LYS 57 B ASP 69 B ASP 63 B GLN 127 B GLN 121 B ASP 133 B ASP 127 B VAL 138 B VAL 132 B ASN 143 B ASN 137 B SER 149 B SER 143 B PHE 154 B PHE 148 B MET 52 B MET 46 B LEU 54 B LEU 48 B LEU 163 B LEU 157 B ASN 168 B ASN 162 B TRP 76 B TRP 70 B ARG 82 B ARG 76 B PHE 99 B PHE 93 B TRP 105 B TRP 99 B SER 108 B SER 102 B ALA 111 B ALA 105 B THR 117 B THR 111 B THR 118 B THR 112 20 C 2 2 21