HEADER DNA 09-MAR-09 3GJK TITLE CRYSTAL STRUCTURE OF A DNA DUPLEX CONTAINING 7,8-DIHYDROPYRIDOL[2,3- TITLE 2 D]PYRIMIDIN-2-ONE COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5'-D(*CP*GP*CP*GP*AP*A)-3'; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: 5'-D(P*TP*TP*(B7C)P*GP*CP*G)-3'; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 MOL_ID: 2; SOURCE 4 SYNTHETIC: YES KEYWDS DNA, DUPLEX, BICYCLIC CYTOSINE, 7, 8-DIHYDROPYRIDOL[2, 3-D]PYRIMIDIN- KEYWDS 2 2-ONE EXPDTA X-RAY DIFFRACTION AUTHOR A.TAKENAKA,E.C.M.JUAN,S.SHIMIZU,T.HARAGUCHI,M.XIAO,T.KUROSE,A.OHKUBO, AUTHOR 2 M.SEKINE,T.SHIBATA,C.L.MILLINGTON,D.M.WILLIAMS REVDAT 2 01-NOV-23 3GJK 1 REMARK LINK REVDAT 1 31-MAR-10 3GJK 0 JRNL AUTH A.TAKENAKA,E.C.M.JUAN,S.SHIMIZU,T.HARAGUCHI,M.XIAO,T.KUROSE, JRNL AUTH 2 A.OHKUBO,M.SEKINE,T.SHIBATA,C.M.MILLINGTON JRNL TITL INSIGHTS INTO THE STABILIZING CONTRIBUTIONS OF BICYCLIC JRNL TITL 2 CYTOSINE ANALOGUES: CRYSTAL STRUCTURES OF DNA DUPLEXES JRNL TITL 3 CONTAINING 7,8-DIHYDROPYRIDOL[2,3-D]PYRIMIDIN-2-ONE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 18.70 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 2071 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.255 REMARK 3 R VALUE (WORKING SET) : 0.252 REMARK 3 FREE R VALUE : 0.314 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.500 REMARK 3 FREE R VALUE TEST SET COUNT : 92 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 148 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.4750 REMARK 3 BIN FREE R VALUE SET COUNT : 4 REMARK 3 BIN FREE R VALUE : 0.5430 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 0 REMARK 3 NUCLEIC ACID ATOMS : 246 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 35 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.35 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.68000 REMARK 3 B22 (A**2) : 1.68000 REMARK 3 B33 (A**2) : -2.52000 REMARK 3 B12 (A**2) : 0.84000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.272 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.249 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.215 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.241 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.909 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 328 ; 0.029 ; 0.023 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 415 ; 4.351 ; 3.000 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 46 ; 0.144 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 126 ; 0.016 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 71 ; 0.300 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 164 ; 0.363 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 6 ; 0.196 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 2 ; 0.395 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 31 ; 0.515 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 1 ; 0.431 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): 4 ; 0.905 ; 0.200 REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 304 ; 3.584 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 415 ; 4.879 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3GJK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 12-MAR-09. REMARK 100 THE DEPOSITION ID IS D_1000051940. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-MAY-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-5A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 2137 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 9.500 REMARK 200 R MERGE (I) : 0.05200 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 70.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 8.80 REMARK 200 R MERGE FOR SHELL (I) : 0.30700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 11.30 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 1EHV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.23 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.69 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20MM SODIUM CACODYLATE (PH7.0), 6MM REMARK 280 SPERMINE TETRAHYDROCHLORIDE, 6MM NACL, 40MM KCL, 5% MPD , VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 1 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -Y,-X,-Z+1/3 REMARK 290 5555 -X+Y,Y,-Z+2/3 REMARK 290 6555 X,X-Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 66.01067 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 33.00533 REMARK 290 SMTRY1 4 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 33.00533 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 66.01067 REMARK 290 SMTRY1 6 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 460 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 2660 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -2.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 K K A 13 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O3' DA A 6 P DT B 7 5555 1.56 REMARK 500 OP1 DG B 12 K K A 13 6456 1.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DG A 4 O3' DG A 4 C3' -0.039 REMARK 500 DG A 4 N3 DG A 4 C4 -0.055 REMARK 500 DA A 6 O3' DA A 6 C3' -0.084 REMARK 500 DA A 6 N3 DA A 6 C4 -0.038 REMARK 500 DA A 6 C5 DA A 6 C6 0.082 REMARK 500 B7C B 9 O3' DG B 10 P 0.096 REMARK 500 DG B 10 O4' DG B 10 C1' -0.082 REMARK 500 DG B 10 N9 DG B 10 C4 -0.068 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC A 1 O4' - C1' - C2' ANGL. DEV. = -5.8 DEGREES REMARK 500 DC A 1 C2 - N1 - C1' ANGL. DEV. = 7.5 DEGREES REMARK 500 DG A 2 O5' - P - OP2 ANGL. DEV. = -7.1 DEGREES REMARK 500 DG A 2 O4' - C1' - N9 ANGL. DEV. = -5.5 DEGREES REMARK 500 DG A 2 C8 - N9 - C4 ANGL. DEV. = 2.6 DEGREES REMARK 500 DC A 3 C1' - O4' - C4' ANGL. DEV. = -7.0 DEGREES REMARK 500 DA A 6 C4' - C3' - O3' ANGL. DEV. = -17.6 DEGREES REMARK 500 DT B 7 O5' - P - OP1 ANGL. DEV. = -6.3 DEGREES REMARK 500 DT B 8 O5' - P - OP1 ANGL. DEV. = -8.4 DEGREES REMARK 500 DT B 8 O4' - C1' - N1 ANGL. DEV. = 3.0 DEGREES REMARK 500 DG B 10 C1' - O4' - C4' ANGL. DEV. = -10.1 DEGREES REMARK 500 DG B 10 C3' - C2' - C1' ANGL. DEV. = -7.5 DEGREES REMARK 500 DG B 10 O4' - C1' - C2' ANGL. DEV. = -7.8 DEGREES REMARK 500 DG B 10 O4' - C1' - N9 ANGL. DEV. = -5.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K A 13 DBREF 3GJK A 1 6 PDB 3GJK 3GJK 1 6 DBREF 3GJK B 7 12 PDB 3GJK 3GJK 7 12 SEQRES 1 A 6 DC DG DC DG DA DA SEQRES 1 B 6 DT DT B7C DG DC DG MODRES 3GJK B7C B 9 DC HET B7C B 9 22 HET K A 13 1 HETNAM B7C 3-(2-DEOXY-5-O-PHOSPHONO-BETA-D-ERYTHRO- HETNAM 2 B7C PENTOFURANOSYL)-7,8-DIHYDROPYRIDO[2,3-D]PYRIMIDIN- HETNAM 3 B7C 2(3H)-ONE HETNAM K POTASSIUM ION FORMUL 2 B7C C12 H16 N3 O7 P FORMUL 3 K K 1+ FORMUL 4 HOH *35(H2 O) LINK O3' DT B 8 P B7C B 9 1555 1555 1.59 LINK O3' B7C B 9 P DG B 10 1555 1555 1.70 LINK O2 DC A 1 K K A 13 1555 1555 2.06 SITE 1 AC1 3 DC A 1 DC B 11 DG B 12 CRYST1 26.221 26.221 99.016 90.00 90.00 120.00 P 32 1 2 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.038137 0.022019 0.000000 0.00000 SCALE2 0.000000 0.044037 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010099 0.00000 ATOM 1 O5' DC A 1 9.142 7.252 47.429 1.00 69.82 O ATOM 2 C5' DC A 1 9.254 7.533 48.816 1.00 71.30 C ATOM 3 C4' DC A 1 9.915 8.880 48.976 1.00 72.07 C ATOM 4 O4' DC A 1 11.277 8.885 48.408 1.00 72.65 O ATOM 5 C3' DC A 1 9.176 10.147 48.469 1.00 69.51 C ATOM 6 O3' DC A 1 8.724 10.963 49.650 1.00 64.50 O ATOM 7 C2' DC A 1 10.378 10.916 47.878 1.00 71.28 C ATOM 8 C1' DC A 1 11.688 10.225 48.412 1.00 71.57 C ATOM 9 N1 DC A 1 12.786 10.417 47.415 1.00 74.39 N ATOM 10 C2 DC A 1 14.161 10.139 47.616 1.00 73.94 C ATOM 11 O2 DC A 1 14.502 9.676 48.662 1.00 64.14 O ATOM 12 N3 DC A 1 15.050 10.417 46.579 1.00 78.58 N ATOM 13 C4 DC A 1 14.563 10.944 45.409 1.00 83.21 C ATOM 14 N4 DC A 1 15.380 11.242 44.351 1.00 81.93 N ATOM 15 C5 DC A 1 13.195 11.205 45.236 1.00 82.34 C ATOM 16 C6 DC A 1 12.371 10.926 46.238 1.00 79.33 C ATOM 17 P DG A 2 7.156 11.363 49.996 1.00 55.26 P ATOM 18 OP1 DG A 2 6.887 12.699 49.355 1.00 55.55 O ATOM 19 OP2 DG A 2 6.886 11.212 51.477 1.00 57.22 O ATOM 20 O5' DG A 2 6.318 10.140 49.478 1.00 53.56 O ATOM 21 C5' DG A 2 5.663 9.286 50.384 1.00 47.79 C ATOM 22 C4' DG A 2 4.600 8.579 49.611 1.00 45.72 C ATOM 23 O4' DG A 2 3.423 9.372 49.296 1.00 38.49 O ATOM 24 C3' DG A 2 5.160 8.110 48.290 1.00 42.01 C ATOM 25 O3' DG A 2 4.418 6.893 48.267 1.00 45.07 O ATOM 26 C2' DG A 2 4.670 9.222 47.370 1.00 43.16 C ATOM 27 C1' DG A 2 3.283 9.543 47.922 1.00 37.37 C ATOM 28 N9 DG A 2 2.978 10.972 47.811 1.00 36.74 N ATOM 29 C8 DG A 2 3.903 11.956 47.847 1.00 38.36 C ATOM 30 N7 DG A 2 3.369 13.144 47.777 1.00 37.60 N ATOM 31 C5 DG A 2 2.027 12.890 47.699 1.00 32.74 C ATOM 32 C6 DG A 2 0.935 13.754 47.619 1.00 36.37 C ATOM 33 O6 DG A 2 0.946 14.994 47.582 1.00 34.19 O ATOM 34 N1 DG A 2 -0.273 13.060 47.577 1.00 37.93 N ATOM 35 C2 DG A 2 -0.410 11.689 47.601 1.00 33.92 C ATOM 36 N2 DG A 2 -1.646 11.152 47.525 1.00 27.88 N ATOM 37 N3 DG A 2 0.602 10.884 47.682 1.00 38.30 N ATOM 38 C4 DG A 2 1.758 11.522 47.721 1.00 37.36 C ATOM 39 P DC A 3 4.606 5.802 47.135 1.00 46.67 P ATOM 40 OP1 DC A 3 4.392 4.429 47.718 1.00 43.53 O ATOM 41 OP2 DC A 3 5.801 6.192 46.417 1.00 38.98 O ATOM 42 O5' DC A 3 3.412 6.009 46.150 1.00 44.17 O ATOM 43 C5' DC A 3 2.166 5.665 46.582 1.00 45.40 C ATOM 44 C4' DC A 3 1.170 6.422 45.778 1.00 41.56 C ATOM 45 O4' DC A 3 1.545 7.808 45.751 1.00 43.34 O ATOM 46 C3' DC A 3 1.239 6.016 44.323 1.00 41.77 C ATOM 47 O3' DC A 3 0.210 5.065 44.108 1.00 43.38 O ATOM 48 C2' DC A 3 1.019 7.344 43.596 1.00 41.05 C ATOM 49 C1' DC A 3 0.759 8.329 44.721 1.00 38.73 C ATOM 50 N1 DC A 3 1.245 9.673 44.464 1.00 35.53 N ATOM 51 C2 DC A 3 0.380 10.723 44.402 1.00 32.61 C ATOM 52 O2 DC A 3 -0.810 10.528 44.533 1.00 36.30 O ATOM 53 N3 DC A 3 0.857 11.957 44.193 1.00 30.30 N ATOM 54 C4 DC A 3 2.154 12.148 44.023 1.00 30.85 C ATOM 55 N4 DC A 3 2.585 13.409 43.794 1.00 39.80 N ATOM 56 C5 DC A 3 3.065 11.083 44.071 1.00 36.94 C ATOM 57 C6 DC A 3 2.571 9.871 44.297 1.00 35.58 C ATOM 58 P DG A 4 0.121 4.278 42.724 1.00 48.23 P ATOM 59 OP1 DG A 4 -0.423 2.966 43.132 1.00 49.53 O ATOM 60 OP2 DG A 4 1.319 4.397 41.832 1.00 43.38 O ATOM 61 O5' DG A 4 -1.085 4.979 42.017 1.00 43.25 O ATOM 62 C5' DG A 4 -2.335 4.951 42.626 1.00 40.95 C ATOM 63 C4' DG A 4 -3.125 6.080 42.060 1.00 43.22 C ATOM 64 O4' DG A 4 -2.264 7.220 42.242 1.00 43.40 O ATOM 65 C3' DG A 4 -3.361 6.004 40.562 1.00 43.18 C ATOM 66 O3' DG A 4 -4.655 6.470 40.455 1.00 50.90 O ATOM 67 C2' DG A 4 -2.498 7.104 39.972 1.00 42.88 C ATOM 68 C1' DG A 4 -2.441 8.064 41.130 1.00 42.11 C ATOM 69 N9 DG A 4 -1.306 9.002 41.050 1.00 41.04 N ATOM 70 C8 DG A 4 -0.032 8.664 40.798 1.00 36.26 C ATOM 71 N7 DG A 4 0.767 9.703 40.699 1.00 40.28 N ATOM 72 C5 DG A 4 -0.031 10.776 40.927 1.00 37.69 C ATOM 73 C6 DG A 4 0.308 12.209 40.972 1.00 41.27 C ATOM 74 O6 DG A 4 1.437 12.770 40.813 1.00 50.33 O ATOM 75 N1 DG A 4 -0.814 12.955 41.239 1.00 38.72 N ATOM 76 C2 DG A 4 -2.096 12.394 41.441 1.00 33.84 C ATOM 77 N2 DG A 4 -3.084 13.218 41.667 1.00 29.95 N ATOM 78 N3 DG A 4 -2.394 11.104 41.419 1.00 33.93 N ATOM 79 C4 DG A 4 -1.350 10.382 41.162 1.00 39.01 C ATOM 80 P DA A 5 -5.404 6.376 39.018 1.00 50.95 P ATOM 81 OP1 DA A 5 -6.424 5.402 39.441 1.00 55.51 O ATOM 82 OP2 DA A 5 -4.474 6.130 37.923 1.00 53.82 O ATOM 83 O5' DA A 5 -5.912 7.860 38.944 1.00 50.04 O ATOM 84 C5' DA A 5 -6.612 8.436 40.018 1.00 47.34 C ATOM 85 C4' DA A 5 -7.057 9.826 39.635 1.00 44.12 C ATOM 86 O4' DA A 5 -5.882 10.654 39.739 1.00 46.14 O ATOM 87 C3' DA A 5 -7.595 10.025 38.200 1.00 42.78 C ATOM 88 O3' DA A 5 -8.600 11.079 38.186 1.00 42.35 O ATOM 89 C2' DA A 5 -6.342 10.385 37.423 1.00 41.62 C ATOM 90 C1' DA A 5 -5.539 11.146 38.450 1.00 38.97 C ATOM 91 N9 DA A 5 -4.123 11.046 38.261 1.00 36.48 N ATOM 92 C8 DA A 5 -3.367 9.928 38.071 1.00 35.76 C ATOM 93 N7 DA A 5 -2.111 10.180 37.890 1.00 39.04 N ATOM 94 C5 DA A 5 -2.027 11.586 37.974 1.00 33.14 C ATOM 95 C6 DA A 5 -0.949 12.493 37.875 1.00 36.74 C ATOM 96 N6 DA A 5 0.298 12.118 37.687 1.00 37.19 N ATOM 97 N1 DA A 5 -1.210 13.829 37.991 1.00 37.47 N ATOM 98 C2 DA A 5 -2.455 14.204 38.203 1.00 38.20 C ATOM 99 N3 DA A 5 -3.544 13.442 38.330 1.00 34.57 N ATOM 100 C4 DA A 5 -3.245 12.107 38.199 1.00 33.29 C ATOM 101 P DA A 6 -9.558 11.316 36.904 1.00 49.04 P ATOM 102 OP1 DA A 6 -10.914 11.748 37.336 1.00 49.72 O ATOM 103 OP2 DA A 6 -9.416 10.261 35.915 1.00 39.95 O ATOM 104 O5' DA A 6 -8.944 12.644 36.320 1.00 41.29 O ATOM 105 C5' DA A 6 -8.869 13.768 37.184 1.00 41.09 C ATOM 106 C4' DA A 6 -8.062 14.863 36.542 1.00 40.65 C ATOM 107 O4' DA A 6 -6.668 14.519 36.546 1.00 35.52 O ATOM 108 C3' DA A 6 -8.402 15.028 35.083 1.00 35.64 C ATOM 109 O3' DA A 6 -8.581 16.343 35.224 1.00 29.01 O ATOM 110 C2' DA A 6 -7.109 14.758 34.321 1.00 36.10 C ATOM 111 C1' DA A 6 -6.029 14.894 35.341 1.00 36.27 C ATOM 112 N9 DA A 6 -4.946 13.913 35.085 1.00 30.73 N ATOM 113 C8 DA A 6 -5.042 12.583 34.857 1.00 33.87 C ATOM 114 N7 DA A 6 -3.865 12.005 34.629 1.00 31.74 N ATOM 115 C5 DA A 6 -2.952 13.038 34.729 1.00 33.38 C ATOM 116 C6 DA A 6 -1.475 13.160 34.594 1.00 35.89 C ATOM 117 N6 DA A 6 -0.621 12.178 34.342 1.00 34.48 N ATOM 118 N1 DA A 6 -0.932 14.373 34.744 1.00 38.90 N ATOM 119 C2 DA A 6 -1.738 15.380 35.014 1.00 42.84 C ATOM 120 N3 DA A 6 -3.071 15.406 35.173 1.00 42.34 N ATOM 121 C4 DA A 6 -3.605 14.225 35.016 1.00 32.50 C TER 122 DA A 6 ATOM 123 P DT B 7 8.945 17.260 31.991 1.00 48.38 P ATOM 124 OP1 DT B 7 9.580 18.474 31.499 1.00 50.33 O ATOM 125 OP2 DT B 7 9.508 16.410 33.072 1.00 43.82 O ATOM 126 O5' DT B 7 7.627 17.894 32.624 1.00 44.83 O ATOM 127 C5' DT B 7 6.796 18.771 31.902 1.00 45.02 C ATOM 128 C4' DT B 7 5.517 18.901 32.677 1.00 49.72 C ATOM 129 O4' DT B 7 4.909 17.616 32.850 1.00 44.89 O ATOM 130 C3' DT B 7 5.698 19.421 34.100 1.00 50.78 C ATOM 131 O3' DT B 7 5.108 20.715 34.087 1.00 54.74 O ATOM 132 C2' DT B 7 4.973 18.384 34.973 1.00 47.43 C ATOM 133 C1' DT B 7 4.078 17.717 33.949 1.00 43.56 C ATOM 134 N1 DT B 7 3.628 16.384 34.172 1.00 39.24 N ATOM 135 C2 DT B 7 2.286 16.219 34.212 1.00 43.06 C ATOM 136 O2 DT B 7 1.473 17.160 34.101 1.00 42.36 O ATOM 137 N3 DT B 7 1.930 14.923 34.387 1.00 39.91 N ATOM 138 C4 DT B 7 2.793 13.803 34.528 1.00 38.73 C ATOM 139 O4 DT B 7 2.321 12.709 34.686 1.00 38.38 O ATOM 140 C5 DT B 7 4.210 14.060 34.477 1.00 35.64 C ATOM 141 C7 DT B 7 5.208 12.926 34.634 1.00 45.05 C ATOM 142 C6 DT B 7 4.547 15.329 34.292 1.00 38.15 C ATOM 143 P DT B 8 5.111 21.611 35.396 1.00 56.84 P ATOM 144 OP1 DT B 8 4.897 23.032 35.036 1.00 62.24 O ATOM 145 OP2 DT B 8 6.210 21.191 36.288 1.00 56.01 O ATOM 146 O5' DT B 8 3.690 21.342 36.004 1.00 54.92 O ATOM 147 C5' DT B 8 2.568 21.877 35.330 1.00 51.40 C ATOM 148 C4' DT B 8 1.322 21.324 35.945 1.00 51.63 C ATOM 149 O4' DT B 8 1.411 19.869 35.910 1.00 45.81 O ATOM 150 C3' DT B 8 1.090 21.754 37.409 1.00 50.35 C ATOM 151 O3' DT B 8 -0.219 22.357 37.280 1.00 53.27 O ATOM 152 C2' DT B 8 1.270 20.455 38.214 1.00 51.15 C ATOM 153 C1' DT B 8 0.996 19.360 37.176 1.00 48.44 C ATOM 154 N1 DT B 8 1.520 17.957 37.403 1.00 42.30 N ATOM 155 C2 DT B 8 0.517 17.051 37.454 1.00 36.70 C ATOM 156 O2 DT B 8 -0.663 17.360 37.302 1.00 37.48 O ATOM 157 N3 DT B 8 0.934 15.793 37.692 1.00 34.93 N ATOM 158 C4 DT B 8 2.247 15.346 37.890 1.00 33.29 C ATOM 159 O4 DT B 8 2.435 14.189 38.071 1.00 37.96 O ATOM 160 C5 DT B 8 3.286 16.335 37.841 1.00 37.91 C ATOM 161 C7 DT B 8 4.736 15.945 38.087 1.00 45.05 C ATOM 162 C6 DT B 8 2.871 17.584 37.584 1.00 38.94 C HETATM 163 P B7C B 9 -0.942 23.153 38.456 1.00 55.16 P HETATM 164 OP1 B7C B 9 -1.888 24.180 37.815 1.00 46.83 O HETATM 165 OP2 B7C B 9 -0.099 23.465 39.636 1.00 57.28 O HETATM 166 O5' B7C B 9 -1.874 21.993 38.977 1.00 52.82 O HETATM 167 N1 B7C B 9 -1.767 17.912 40.530 1.00 41.39 N HETATM 168 C6 B7C B 9 -0.570 18.541 40.649 1.00 47.65 C HETATM 169 C2 B7C B 9 -1.850 16.529 40.642 1.00 43.05 C HETATM 170 O2 B7C B 9 -2.897 15.891 40.576 1.00 45.26 O HETATM 171 N3 B7C B 9 -0.695 15.872 40.847 1.00 45.41 N HETATM 172 C4 B7C B 9 0.472 16.479 40.972 1.00 47.95 C HETATM 173 N4 B7C B 9 1.515 15.610 41.218 1.00 52.27 N HETATM 174 C5 B7C B 9 0.563 17.829 40.871 1.00 49.77 C HETATM 175 C7 B7C B 9 1.814 18.407 41.090 1.00 52.64 C HETATM 176 C8 B7C B 9 2.944 17.583 40.815 1.00 52.51 C HETATM 177 C9 B7C B 9 2.888 16.070 41.161 1.00 49.42 C HETATM 178 C2' B7C B 9 -3.327 19.919 41.184 1.00 47.04 C HETATM 179 C5' B7C B 9 -2.999 21.563 38.193 1.00 45.72 C HETATM 180 C4' B7C B 9 -3.690 20.412 38.859 1.00 42.91 C HETATM 181 O4' B7C B 9 -2.679 19.422 39.046 1.00 40.69 O HETATM 182 C1' B7C B 9 -2.966 18.767 40.243 1.00 46.33 C HETATM 183 C3' B7C B 9 -4.176 20.771 40.249 1.00 45.05 C HETATM 184 O3' B7C B 9 -5.527 20.381 40.293 1.00 47.00 O ATOM 185 P DG B 10 -6.411 21.077 41.572 1.00 53.01 P ATOM 186 OP1 DG B 10 -7.884 21.209 41.252 1.00 53.83 O ATOM 187 OP2 DG B 10 -5.502 22.209 42.011 1.00 46.08 O ATOM 188 O5' DG B 10 -6.187 19.903 42.586 1.00 45.60 O ATOM 189 C5' DG B 10 -6.977 18.754 42.508 1.00 43.37 C ATOM 190 C4' DG B 10 -6.574 17.847 43.616 1.00 42.13 C ATOM 191 O4' DG B 10 -5.188 17.685 43.414 1.00 36.25 O ATOM 192 C3' DG B 10 -6.653 18.506 44.991 1.00 37.26 C ATOM 193 O3' DG B 10 -7.213 17.563 45.907 1.00 40.34 O ATOM 194 C2' DG B 10 -5.184 18.606 45.330 1.00 35.57 C ATOM 195 C1' DG B 10 -4.811 17.349 44.651 1.00 31.84 C ATOM 196 N9 DG B 10 -3.414 17.211 44.516 1.00 35.89 N ATOM 197 C8 DG B 10 -2.547 18.243 44.318 1.00 32.23 C ATOM 198 N7 DG B 10 -1.327 17.849 44.215 1.00 34.32 N ATOM 199 C5 DG B 10 -1.421 16.471 44.338 1.00 32.65 C ATOM 200 C6 DG B 10 -0.442 15.513 44.300 1.00 32.99 C ATOM 201 O6 DG B 10 0.771 15.681 44.173 1.00 37.37 O ATOM 202 N1 DG B 10 -0.978 14.238 44.444 1.00 35.62 N ATOM 203 C2 DG B 10 -2.322 13.965 44.632 1.00 39.43 C ATOM 204 N2 DG B 10 -2.651 12.724 44.784 1.00 36.70 N ATOM 205 N3 DG B 10 -3.252 14.867 44.673 1.00 35.22 N ATOM 206 C4 DG B 10 -2.739 16.092 44.518 1.00 30.86 C ATOM 207 P DC B 11 -8.642 17.827 46.564 1.00 37.55 P ATOM 208 OP1 DC B 11 -9.599 18.054 45.459 1.00 41.12 O ATOM 209 OP2 DC B 11 -8.428 18.871 47.553 1.00 34.51 O ATOM 210 O5' DC B 11 -8.872 16.477 47.360 1.00 37.54 O ATOM 211 C5' DC B 11 -9.165 15.289 46.670 1.00 37.87 C ATOM 212 C4' DC B 11 -8.607 14.118 47.421 1.00 38.24 C ATOM 213 O4' DC B 11 -7.218 14.255 47.075 1.00 38.15 O ATOM 214 C3' DC B 11 -8.668 14.122 48.954 1.00 34.99 C ATOM 215 O3' DC B 11 -8.775 12.752 49.318 1.00 33.42 O ATOM 216 C2' DC B 11 -7.248 14.498 49.347 1.00 37.72 C ATOM 217 C1' DC B 11 -6.421 13.968 48.198 1.00 35.09 C ATOM 218 N1 DC B 11 -5.129 14.682 48.073 1.00 31.61 N ATOM 219 C2 DC B 11 -3.930 13.960 47.837 1.00 33.87 C ATOM 220 O2 DC B 11 -3.966 12.750 47.665 1.00 35.31 O ATOM 221 N3 DC B 11 -2.756 14.611 47.801 1.00 33.86 N ATOM 222 C4 DC B 11 -2.723 15.920 47.964 1.00 33.74 C ATOM 223 N4 DC B 11 -1.520 16.513 47.924 1.00 33.78 N ATOM 224 C5 DC B 11 -3.911 16.686 48.175 1.00 30.28 C ATOM 225 C6 DC B 11 -5.082 16.033 48.219 1.00 32.58 C ATOM 226 P DG B 12 -9.512 12.331 50.674 1.00 39.81 P ATOM 227 OP1 DG B 12 -9.722 10.941 50.797 1.00 37.56 O ATOM 228 OP2 DG B 12 -10.681 13.189 50.765 1.00 38.96 O ATOM 229 O5' DG B 12 -8.491 12.734 51.829 1.00 42.46 O ATOM 230 C5' DG B 12 -7.294 12.036 52.227 1.00 36.34 C ATOM 231 C4' DG B 12 -6.723 12.756 53.436 1.00 34.13 C ATOM 232 O4' DG B 12 -6.511 14.173 53.171 1.00 38.85 O ATOM 233 C3' DG B 12 -7.687 12.738 54.604 1.00 36.97 C ATOM 234 O3' DG B 12 -7.325 11.794 55.586 1.00 40.86 O ATOM 235 C2' DG B 12 -7.464 14.083 55.265 1.00 34.13 C ATOM 236 C1' DG B 12 -7.043 15.015 54.173 1.00 37.20 C ATOM 237 N9 DG B 12 -8.207 15.620 53.538 1.00 40.38 N ATOM 238 C8 DG B 12 -9.528 15.380 53.807 1.00 42.58 C ATOM 239 N7 DG B 12 -10.328 15.962 52.951 1.00 44.92 N ATOM 240 C5 DG B 12 -9.472 16.655 52.103 1.00 42.98 C ATOM 241 C6 DG B 12 -9.724 17.488 50.977 1.00 45.14 C ATOM 242 O6 DG B 12 -10.781 17.787 50.450 1.00 45.52 O ATOM 243 N1 DG B 12 -8.559 17.990 50.437 1.00 43.79 N ATOM 244 C2 DG B 12 -7.306 17.731 50.870 1.00 40.98 C ATOM 245 N2 DG B 12 -6.301 18.335 50.197 1.00 34.52 N ATOM 246 N3 DG B 12 -7.044 16.950 51.885 1.00 44.95 N ATOM 247 C4 DG B 12 -8.162 16.464 52.461 1.00 39.74 C TER 248 DG B 12 HETATM 249 K K A 13 16.370 9.451 49.500 0.50 21.63 K HETATM 250 O HOH A 7 2.729 11.337 51.336 1.00 28.77 O HETATM 251 O HOH A 8 1.598 6.728 50.575 1.00 40.03 O HETATM 252 O HOH A 9 0.789 9.106 31.789 1.00 46.71 O HETATM 253 O HOH A 10 3.266 11.124 40.292 1.00 58.72 O HETATM 254 O HOH A 11 -8.079 8.196 34.968 1.00 47.57 O HETATM 255 O HOH A 17 -2.335 1.409 41.430 1.00 55.61 O HETATM 256 O HOH A 18 10.506 19.661 49.867 1.00 70.30 O HETATM 257 O HOH A 19 2.327 18.176 46.430 1.00 57.86 O HETATM 258 O HOH A 20 12.748 8.544 50.213 1.00 58.73 O HETATM 259 O HOH A 22 5.262 15.379 46.768 1.00 68.27 O HETATM 260 O HOH A 23 -10.386 13.882 40.486 1.00 81.19 O HETATM 261 O HOH A 24 -5.504 2.470 42.966 1.00 60.32 O HETATM 262 O HOH A 25 1.407 6.110 39.665 1.00 50.16 O HETATM 263 O HOH A 27 -11.670 8.663 33.940 1.00 60.28 O HETATM 264 O HOH A 28 3.891 2.998 43.380 1.00 59.61 O HETATM 265 O HOH A 33 2.178 17.284 48.969 0.50 24.42 O HETATM 266 O HOH A 34 8.433 16.432 52.397 1.00 62.65 O HETATM 267 O HOH B 2 4.392 12.589 38.828 1.00 56.37 O HETATM 268 O HOH B 4 7.454 16.054 35.738 1.00 49.54 O HETATM 269 O HOH B 6 -10.951 10.184 53.783 1.00 66.77 O HETATM 270 O HOH B 13 3.042 18.198 29.714 1.00 31.91 O HETATM 271 O HOH B 14 5.154 24.643 38.509 1.00 55.69 O HETATM 272 O HOH B 15 10.845 19.991 30.170 1.00 65.98 O HETATM 273 O HOH B 16 8.617 23.462 37.119 1.00 65.37 O HETATM 274 O HOH B 17 -3.385 21.746 44.620 1.00 42.93 O HETATM 275 O HOH B 18 8.756 20.502 40.359 1.00 65.14 O HETATM 276 O HOH B 19 0.648 19.528 43.362 1.00 57.94 O HETATM 277 O HOH B 20 7.317 26.275 36.239 1.00 76.08 O HETATM 278 O HOH B 21 6.507 16.486 41.076 1.00 56.39 O HETATM 279 O HOH B 26 0.106 24.587 34.134 1.00 79.02 O HETATM 280 O HOH B 29 -13.145 16.610 46.583 1.00 59.56 O HETATM 281 O HOH B 30 -12.908 17.118 53.182 1.00 51.26 O HETATM 282 O HOH B 31 -10.597 20.221 42.614 1.00 67.68 O HETATM 283 O HOH B 32 8.914 13.376 33.970 1.00 61.23 O HETATM 284 O HOH B 35 0.417 19.059 32.936 0.50 24.12 O CONECT 11 249 CONECT 151 163 CONECT 163 151 164 165 166 CONECT 164 163 CONECT 165 163 CONECT 166 163 179 CONECT 167 168 169 182 CONECT 168 167 174 CONECT 169 167 170 171 CONECT 170 169 CONECT 171 169 172 CONECT 172 171 173 174 CONECT 173 172 177 CONECT 174 168 172 175 CONECT 175 174 176 CONECT 176 175 177 CONECT 177 173 176 CONECT 178 182 183 CONECT 179 166 180 CONECT 180 179 181 183 CONECT 181 180 182 CONECT 182 167 178 181 CONECT 183 178 180 184 CONECT 184 183 185 CONECT 185 184 CONECT 249 11 MASTER 339 0 2 0 0 0 1 6 282 2 26 2 END