HEADER RNA/CYCLOHEXENE-RNA HYBRID 12-NOV-09 3KNC TITLE CRYSTAL STRUCTURE OF THE CENA-RNA HYBRID OCTAMER CE(GCGTAGCG) TITLE 2 :R(CGCUACGC) COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5'-D(*(XGR)P*(XCR)P*(XGR)P*(XTR)P*(XAR)P*(XGR)P*(XCR) COMPND 3 P*(XGR)P*(XGR))-3'; COMPND 4 CHAIN: A; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: CENA; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: 5'-R(*CP*GP*CP*UP*AP*CP*GP*C)-3'; COMPND 9 CHAIN: B; COMPND 10 ENGINEERED: YES; COMPND 11 OTHER_DETAILS: RNA SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: THE CENA STRAND WAS SYNTHESIZED.; SOURCE 4 MOL_ID: 2; SOURCE 5 SYNTHETIC: YES; SOURCE 6 OTHER_DETAILS: THE RNA STRAND WAS SYNTHESIZED. KEYWDS CYCLOHEXENE, SUGAR MODIFICATION, RNA, RNA-CYCLOHEXENE-RNA HYBRID KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.OVAERE,L.VAN MEERVELT REVDAT 7 21-FEB-24 3KNC 1 REMARK REVDAT 6 13-OCT-21 3KNC 1 REMARK DBREF SEQADV LINK REVDAT 5 01-NOV-17 3KNC 1 REMARK REVDAT 4 01-FEB-12 3KNC 1 SEQADV VERSN REVDAT 3 13-JUL-11 3KNC 1 JRNL REVDAT 2 29-JUN-11 3KNC 1 JRNL REVDAT 1 08-DEC-10 3KNC 0 JRNL AUTH M.OVAERE,P.HERDEWIJN,L.VAN MEERVELT JRNL TITL THE CRYSTAL STRUCTURE OF THE CENA:RNA HYBRID JRNL TITL 2 CE(GCGTAGCG):R(CGCUACGC). JRNL REF CHEMISTRY V. 17 7823 2011 JRNL REFN ISSN 0947-6539 JRNL PMID 21618623 JRNL DOI 10.1002/CHEM.201003594 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.30 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 2574 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.400 REMARK 3 FREE R VALUE TEST SET COUNT : 114 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.57 REMARK 3 REFLECTION IN BIN (WORKING SET) : 169 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.27 REMARK 3 BIN R VALUE (WORKING SET) : 0.3790 REMARK 3 BIN FREE R VALUE SET COUNT : 9 REMARK 3 BIN FREE R VALUE : 0.7330 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 0 REMARK 3 NUCLEIC ACID ATOMS : 341 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 47 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 61.05 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.49000 REMARK 3 B22 (A**2) : 4.49000 REMARK 3 B33 (A**2) : -6.73000 REMARK 3 B12 (A**2) : 2.24000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.310 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.237 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.190 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.838 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.970 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.958 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 396 ; 0.018 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 617 ; 2.247 ; 2.972 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 63 ; 0.120 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 199 ; 0.010 ; 0.017 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1 ; 0.108 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 392 ; 2.812 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 605 ; 4.317 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE FRIEDEL PAIRS WERE USED IN PHASING REMARK 4 REMARK 4 3KNC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-NOV-09. REMARK 100 THE DEPOSITION ID IS D_1000056206. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-SEP-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.9 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 2575 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 36.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 9.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.04800 REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.1.4 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: THE STRUCTURE FACTOR FILE CONTAINS FRIEDEL PAIRS REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M MAGNESIUM FORMATE, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 45.62933 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 22.81467 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 22.81467 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 45.62933 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL UNIT IS THE SAME AS ASYMMETRIC UNIT REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1280 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11444 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.1 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 MG MG A 200 LIES ON A SPECIAL POSITION. REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 XGR A 9 N1 C2 N2 N3 C4 C5 C6 REMARK 470 XGR A 9 O6 N7 C8 N9 C1' C2' C3' REMARK 470 XGR A 9 O3' C4' C5' C6' C7' REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 U B 4 C5' U B 4 C4' -0.043 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 100 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 101 O REMARK 620 2 HOH A 102 O 176.6 REMARK 620 3 HOH A 103 O 92.0 86.0 REMARK 620 4 HOH A 104 O 92.6 90.0 90.3 REMARK 620 5 HOH A 105 O 90.9 86.5 90.9 176.2 REMARK 620 6 HOH A 106 O 86.1 96.1 177.4 88.1 90.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 200 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 201 O REMARK 620 2 HOH A 202 O 179.4 REMARK 620 3 HOH A 203 O 89.5 90.0 REMARK 620 4 HOH A 204 O 90.8 88.8 88.5 REMARK 620 5 HOH A 205 O 89.1 91.3 92.6 178.9 REMARK 620 6 HOH A 206 O 93.2 87.2 176.4 89.0 89.9 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 100 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 200 DBREF 3KNC A 1 9 PDB 3KNC 3KNC 1 9 DBREF 3KNC B 1 8 PDB 3KNC 3KNC 1 8 SEQADV 3KNC XGR A 1 PDB 3KNC C 2 ENGINEERED MUTATION SEQADV 3KNC XCR A 2 PDB 3KNC G 3 ENGINEERED MUTATION SEQADV 3KNC XGR A 3 PDB 3KNC DT 4 ENGINEERED MUTATION SEQADV 3KNC XTR A 4 PDB 3KNC A 5 ENGINEERED MUTATION SEQADV 3KNC XAR A 5 PDB 3KNC G 6 ENGINEERED MUTATION SEQADV 3KNC XGR A 6 PDB 3KNC C 7 ENGINEERED MUTATION SEQADV 3KNC XCR A 7 PDB 3KNC G 8 ENGINEERED MUTATION SEQADV 3KNC XGR A 8 PDB 3KNC G 9 ENGINEERED MUTATION SEQADV 3KNC XGR A 9 PDB 3KNC G 10 ENGINEERED MUTATION SEQRES 1 A 9 XGR XCR XGR XTR XAR XGR XCR XGR XGR SEQRES 1 B 8 C G C U A C G C MODRES 3KNC XGR A 1 DG MODRES 3KNC XCR A 2 DC MODRES 3KNC XGR A 3 DG MODRES 3KNC XTR A 4 DT MODRES 3KNC XGR A 6 DG MODRES 3KNC XCR A 7 DC MODRES 3KNC XGR A 8 DG MODRES 3KNC XGR A 9 DG HET XGR A 1 20 HET XCR A 2 20 HET XGR A 3 23 HET XTR A 4 21 HET XAR A 5 22 HET XGR A 6 23 HET XCR A 7 20 HET XGR A 8 23 HET XGR A 9 4 HET MG A 100 1 HET MG A 200 1 HETNAM XGR [(1R,4S,6S)-4-(2-AMINO-6-OXO-1,6-DIHYDRO-9H-PURIN-9- HETNAM 2 XGR YL)-6-HYDROXYCYCLOHEX-2-EN-1-YL]METHYL DIHYDROGEN HETNAM 3 XGR PHOSPHATE HETNAM XCR [(1R,4S,6S)-4-(4-AMINO-2-OXOPYRIMIDIN-1(2H)-YL)-6- HETNAM 2 XCR HYDROXYCYCLOHEX-2-EN-1-YL]METHYL DIHYDROGEN PHOSPHATE HETNAM XTR [(1R,4S,6S)-6-HYDROXY-4-(5-METHYL-2,4-DIOXO-3,4- HETNAM 2 XTR DIHYDROPYRIMIDIN-1(2H)-YL)CYCLOHEX-2-EN-1-YL]METHYL HETNAM 3 XTR DIHYDROGEN PHOSPHATE HETNAM XAR [(1R,4S,6S)-4-(6-AMINO-9H-PURIN-9-YL)-6- HETNAM 2 XAR HYDROXYCYCLOHEX-2-EN-1-YL]METHYL DIHYDROGEN PHOSPHATE HETNAM MG MAGNESIUM ION FORMUL 1 XGR 5(C12 H16 N5 O6 P) FORMUL 1 XCR 2(C11 H16 N3 O6 P) FORMUL 1 XTR C12 H17 N2 O7 P FORMUL 1 XAR C12 H16 N5 O5 P FORMUL 3 MG 2(MG 2+) FORMUL 5 HOH *47(H2 O) LINK O3' XTR A 4 P XAR A 5 1555 1555 1.57 LINK MG MG A 100 O HOH A 101 1555 1555 2.14 LINK MG MG A 100 O HOH A 102 1555 1555 2.13 LINK MG MG A 100 O HOH A 103 1555 1555 2.13 LINK MG MG A 100 O HOH A 104 1555 1555 2.15 LINK MG MG A 100 O HOH A 105 1555 1555 2.14 LINK MG MG A 100 O HOH A 106 1555 1555 2.14 LINK MG MG A 200 O HOH A 201 1555 1555 2.16 LINK MG MG A 200 O HOH A 202 1555 1555 2.17 LINK MG MG A 200 O HOH A 203 1555 1555 2.18 LINK MG MG A 200 O HOH A 204 1555 1555 2.16 LINK MG MG A 200 O HOH A 205 1555 1555 2.16 LINK MG MG A 200 O HOH A 206 1555 1555 2.16 SITE 1 AC1 6 HOH A 101 HOH A 102 HOH A 103 HOH A 104 SITE 2 AC1 6 HOH A 105 HOH A 106 SITE 1 AC2 6 HOH A 201 HOH A 202 HOH A 203 HOH A 204 SITE 2 AC2 6 HOH A 205 HOH A 206 CRYST1 41.919 41.919 68.444 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023856 0.013773 0.000000 0.00000 SCALE2 0.000000 0.027546 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014610 0.00000 HETATM 1 N1 XGR A 1 15.217 -13.830 -2.098 1.00 49.22 N HETATM 2 C2 XGR A 1 14.996 -14.919 -1.316 1.00 48.32 C HETATM 3 N2 XGR A 1 15.852 -15.950 -1.453 1.00 49.38 N HETATM 4 N3 XGR A 1 13.983 -14.984 -0.471 1.00 50.70 N HETATM 5 C4 XGR A 1 13.211 -13.874 -0.438 1.00 52.42 C HETATM 6 C5 XGR A 1 13.374 -12.752 -1.182 1.00 51.19 C HETATM 7 C6 XGR A 1 14.433 -12.686 -2.087 1.00 50.38 C HETATM 8 O6 XGR A 1 14.719 -11.745 -2.823 1.00 54.08 O HETATM 9 N7 XGR A 1 12.394 -11.816 -0.902 1.00 53.93 N HETATM 10 C8 XGR A 1 11.641 -12.400 -0.008 1.00 54.29 C HETATM 11 N9 XGR A 1 12.078 -13.643 0.342 1.00 55.93 N HETATM 12 C1' XGR A 1 11.445 -14.513 1.332 1.00 58.70 C HETATM 13 C2' XGR A 1 11.997 -14.342 2.753 1.00 60.71 C HETATM 14 C3' XGR A 1 11.470 -13.073 3.433 1.00 63.73 C HETATM 15 O3' XGR A 1 11.949 -12.968 4.744 1.00 62.65 O HETATM 16 C4' XGR A 1 9.965 -13.072 3.555 1.00 68.56 C HETATM 17 C5' XGR A 1 9.471 -11.645 3.819 1.00 73.28 C HETATM 18 O5' XGR A 1 8.857 -11.065 2.659 1.00 76.22 O HETATM 19 C6' XGR A 1 9.321 -13.612 2.306 1.00 66.78 C HETATM 20 C7' XGR A 1 9.976 -14.226 1.337 1.00 62.16 C HETATM 21 P XCR A 2 13.493 -12.749 5.018 1.00 63.70 P HETATM 22 N1 XCR A 2 17.201 -14.312 1.160 1.00 58.19 N HETATM 23 C2 XCR A 2 18.156 -13.936 0.190 1.00 57.53 C HETATM 24 O2 XCR A 2 19.105 -14.698 -0.102 1.00 61.35 O HETATM 25 N3 XCR A 2 18.025 -12.727 -0.422 1.00 53.53 N HETATM 26 C4 XCR A 2 17.009 -11.903 -0.135 1.00 54.60 C HETATM 27 N4 XCR A 2 16.920 -10.725 -0.793 1.00 54.32 N HETATM 28 C5 XCR A 2 16.027 -12.255 0.831 1.00 55.40 C HETATM 29 C6 XCR A 2 16.171 -13.443 1.432 1.00 58.02 C HETATM 30 C1' XCR A 2 17.280 -15.646 1.905 1.00 61.13 C HETATM 31 C2' XCR A 2 18.148 -15.604 3.177 1.00 62.98 C HETATM 32 C3' XCR A 2 17.508 -14.784 4.324 1.00 62.18 C HETATM 33 O3' XCR A 2 18.344 -14.793 5.478 1.00 63.44 O HETATM 34 C4' XCR A 2 16.187 -15.361 4.753 1.00 59.37 C HETATM 35 C5' XCR A 2 15.384 -14.292 5.401 1.00 55.89 C HETATM 36 O5' XCR A 2 14.211 -14.101 4.665 1.00 58.85 O HETATM 37 C6' XCR A 2 15.435 -15.961 3.593 1.00 61.20 C HETATM 38 C7' XCR A 2 15.909 -16.103 2.355 1.00 60.48 C HETATM 39 OP1 XCR A 2 13.677 -12.567 6.468 1.00 69.13 O HETATM 40 OP2 XCR A 2 13.888 -11.727 4.033 1.00 66.16 O HETATM 41 P XGR A 3 19.180 -13.509 5.869 1.00 62.48 P HETATM 42 N1 XGR A 3 22.005 -9.662 -1.190 1.00 46.91 N HETATM 43 C2 XGR A 3 23.031 -10.553 -1.265 1.00 51.10 C HETATM 44 N2 XGR A 3 23.992 -10.289 -2.182 1.00 54.36 N HETATM 45 N3 XGR A 3 23.126 -11.625 -0.502 1.00 49.00 N HETATM 46 C4 XGR A 3 22.105 -11.735 0.353 1.00 48.98 C HETATM 47 C5 XGR A 3 21.039 -10.901 0.482 1.00 45.34 C HETATM 48 C6 XGR A 3 20.952 -9.773 -0.335 1.00 46.72 C HETATM 49 O6 XGR A 3 20.075 -8.904 -0.373 1.00 52.70 O HETATM 50 N7 XGR A 3 20.174 -11.359 1.469 1.00 48.54 N HETATM 51 C8 XGR A 3 20.747 -12.460 1.910 1.00 51.98 C HETATM 52 N9 XGR A 3 21.937 -12.764 1.285 1.00 55.07 N HETATM 53 C1' XGR A 3 22.849 -13.925 1.523 1.00 60.04 C HETATM 54 C2' XGR A 3 23.781 -13.706 2.714 1.00 62.30 C HETATM 55 C3' XGR A 3 23.048 -13.700 4.058 1.00 61.95 C HETATM 56 O3' XGR A 3 24.050 -13.573 5.040 1.00 64.66 O HETATM 57 C4' XGR A 3 22.376 -15.051 4.302 1.00 63.44 C HETATM 58 C5' XGR A 3 21.202 -14.989 5.274 1.00 59.34 C HETATM 59 O5' XGR A 3 20.564 -13.745 5.131 1.00 58.56 O HETATM 60 C6' XGR A 3 21.905 -15.695 3.010 1.00 66.22 C HETATM 61 C7' XGR A 3 22.106 -15.206 1.786 1.00 63.29 C HETATM 62 OP1 XGR A 3 19.555 -13.613 7.289 1.00 69.68 O HETATM 63 OP2 XGR A 3 18.496 -12.322 5.300 1.00 62.47 O HETATM 64 C4' XTR A 4 27.668 -11.206 3.220 1.00 63.14 C HETATM 65 C7' XTR A 4 26.476 -11.073 0.982 1.00 59.27 C HETATM 66 C6' XTR A 4 26.947 -11.776 2.013 1.00 64.09 C HETATM 67 C1' XTR A 4 26.584 -9.584 0.802 1.00 57.16 C HETATM 68 O4 XTR A 4 21.735 -7.231 1.679 1.00 54.71 O HETATM 69 C4 XTR A 4 22.819 -7.767 1.496 1.00 48.66 C HETATM 70 C5 XTR A 4 23.265 -8.856 2.284 1.00 44.25 C HETATM 71 C5M XTR A 4 22.412 -9.385 3.380 1.00 43.01 C HETATM 72 C6 XTR A 4 24.441 -9.395 2.033 1.00 46.58 C HETATM 73 N3 XTR A 4 23.681 -7.355 0.526 1.00 50.34 N HETATM 74 C2 XTR A 4 24.892 -7.894 0.253 1.00 49.42 C HETATM 75 O2 XTR A 4 25.580 -7.456 -0.641 1.00 53.50 O HETATM 76 N1 XTR A 4 25.265 -8.941 1.036 1.00 50.50 N HETATM 77 C2' XTR A 4 27.651 -9.087 1.767 1.00 60.89 C HETATM 78 C3' XTR A 4 27.544 -9.691 3.174 1.00 63.14 C HETATM 79 P XTR A 4 24.684 -12.199 5.550 1.00 65.66 P HETATM 80 OP1 XTR A 4 25.573 -12.582 6.652 1.00 69.90 O HETATM 81 OP2 XTR A 4 23.631 -11.184 5.731 1.00 62.83 O HETATM 82 O5' XTR A 4 25.654 -11.678 4.412 1.00 63.45 O HETATM 83 C5' XTR A 4 27.061 -11.798 4.482 1.00 61.48 C HETATM 84 O3' XTR A 4 28.534 -9.109 3.989 1.00 64.70 O HETATM 85 O1P XAR A 5 26.741 -7.837 5.186 1.00 64.19 O HETATM 86 P XAR A 5 28.185 -7.962 5.006 1.00 62.43 P HETATM 87 O2P XAR A 5 29.136 -8.196 6.092 1.00 63.69 O HETATM 88 O5' XAR A 5 28.569 -6.677 4.167 1.00 60.21 O HETATM 89 C5' XAR A 5 29.915 -6.421 3.827 1.00 59.46 C HETATM 90 C4' XAR A 5 29.977 -5.353 2.763 1.00 58.51 C HETATM 91 C3' XAR A 5 29.102 -4.190 3.169 1.00 57.68 C HETATM 92 O3' XAR A 5 29.868 -3.430 4.071 1.00 60.15 O HETATM 93 C2' XAR A 5 28.692 -3.325 1.979 1.00 56.39 C HETATM 94 C1' XAR A 5 27.822 -4.127 1.001 1.00 55.19 C HETATM 95 C7' XAR A 5 28.506 -5.450 0.764 1.00 58.64 C HETATM 96 C6' XAR A 5 29.462 -5.984 1.514 1.00 59.26 C HETATM 97 N9 XAR A 5 26.439 -4.327 1.491 1.00 53.08 N HETATM 98 C8 XAR A 5 25.998 -5.188 2.462 1.00 50.20 C HETATM 99 N7 XAR A 5 24.711 -5.097 2.684 1.00 49.76 N HETATM 100 C5 XAR A 5 24.272 -4.134 1.797 1.00 47.85 C HETATM 101 C4 XAR A 5 25.311 -3.654 1.062 1.00 49.70 C HETATM 102 N3 XAR A 5 25.245 -2.712 0.108 1.00 52.67 N HETATM 103 C6 XAR A 5 23.009 -3.588 1.524 1.00 49.73 C HETATM 104 N6 XAR A 5 21.893 -3.947 2.143 1.00 51.52 N HETATM 105 N1 XAR A 5 22.900 -2.643 0.586 1.00 50.81 N HETATM 106 C2 XAR A 5 24.001 -2.268 -0.058 1.00 50.50 C HETATM 107 P XGR A 6 29.207 -2.611 5.254 1.00 57.89 P HETATM 108 N1 XGR A 6 20.986 0.095 2.821 1.00 45.96 N HETATM 109 C2 XGR A 6 21.622 1.125 2.203 1.00 43.12 C HETATM 110 N2 XGR A 6 20.849 2.049 1.660 1.00 44.61 N HETATM 111 N3 XGR A 6 22.914 1.241 2.151 1.00 42.73 N HETATM 112 C4 XGR A 6 23.528 0.208 2.757 1.00 45.71 C HETATM 113 C5 XGR A 6 22.990 -0.871 3.359 1.00 43.83 C HETATM 114 C6 XGR A 6 21.615 -0.977 3.417 1.00 46.16 C HETATM 115 O6 XGR A 6 20.950 -1.877 3.934 1.00 50.05 O HETATM 116 N7 XGR A 6 23.965 -1.714 3.870 1.00 48.12 N HETATM 117 C8 XGR A 6 25.088 -1.148 3.551 1.00 49.05 C HETATM 118 N9 XGR A 6 24.896 0.032 2.870 1.00 52.05 N HETATM 119 C1' XGR A 6 25.921 0.946 2.370 1.00 54.85 C HETATM 120 C2' XGR A 6 26.304 1.903 3.513 1.00 55.95 C HETATM 121 C3' XGR A 6 27.231 1.252 4.542 1.00 55.21 C HETATM 122 O3' XGR A 6 27.619 2.179 5.527 1.00 56.40 O HETATM 123 C4' XGR A 6 28.511 0.872 3.891 1.00 54.22 C HETATM 124 C5' XGR A 6 29.182 -0.089 4.816 1.00 53.84 C HETATM 125 O5' XGR A 6 28.695 -1.349 4.471 1.00 52.70 O HETATM 126 C6' XGR A 6 28.239 0.143 2.610 1.00 56.74 C HETATM 127 C7' XGR A 6 27.109 0.161 1.929 1.00 54.52 C HETATM 128 OP1 XGR A 6 30.251 -2.106 6.151 1.00 62.02 O HETATM 129 OP2 XGR A 6 28.068 -3.373 5.765 1.00 58.36 O HETATM 130 P XCR A 7 27.031 2.071 6.977 1.00 52.44 P HETATM 131 N1 XCR A 7 21.657 2.552 5.695 1.00 54.05 N HETATM 132 C2 XCR A 7 20.309 2.218 5.756 1.00 54.89 C HETATM 133 O2 XCR A 7 19.471 3.031 5.349 1.00 57.26 O HETATM 134 N3 XCR A 7 19.971 1.019 6.270 1.00 53.86 N HETATM 135 C4 XCR A 7 20.924 0.193 6.714 1.00 54.66 C HETATM 136 N4 XCR A 7 20.601 -0.999 7.229 1.00 57.50 N HETATM 137 C5 XCR A 7 22.275 0.521 6.668 1.00 51.51 C HETATM 138 C6 XCR A 7 22.582 1.691 6.161 1.00 52.77 C HETATM 139 C1' XCR A 7 22.094 3.870 5.152 1.00 54.29 C HETATM 140 C2' XCR A 7 22.201 4.887 6.303 1.00 56.58 C HETATM 141 C3' XCR A 7 23.453 4.729 7.163 1.00 54.42 C HETATM 142 O3' XCR A 7 23.451 5.707 8.190 1.00 56.81 O HETATM 143 C4' XCR A 7 24.692 4.944 6.305 1.00 54.18 C HETATM 144 C5' XCR A 7 25.899 4.356 7.003 1.00 52.44 C HETATM 145 O5' XCR A 7 25.773 2.964 6.937 1.00 52.07 O HETATM 146 C6' XCR A 7 24.571 4.248 4.970 1.00 55.85 C HETATM 147 C7' XCR A 7 23.438 3.762 4.462 1.00 56.00 C HETATM 148 OP1 XCR A 7 27.954 2.735 7.871 1.00 58.40 O HETATM 149 OP2 XCR A 7 26.539 0.707 7.130 1.00 52.60 O HETATM 150 P XGR A 8 22.631 5.525 9.531 1.00 55.58 P HETATM 151 N1 XGR A 8 15.761 0.258 9.690 1.00 63.24 N HETATM 152 C2 XGR A 8 14.955 1.335 9.393 1.00 62.35 C HETATM 153 N2 XGR A 8 13.654 1.103 9.455 1.00 64.20 N HETATM 154 N3 XGR A 8 15.398 2.547 9.076 1.00 60.34 N HETATM 155 C4 XGR A 8 16.755 2.586 9.053 1.00 57.26 C HETATM 156 C5 XGR A 8 17.641 1.566 9.320 1.00 57.38 C HETATM 157 C6 XGR A 8 17.168 0.284 9.681 1.00 61.96 C HETATM 158 O6 XGR A 8 17.854 -0.739 9.964 1.00 61.70 O HETATM 159 N7 XGR A 8 18.942 1.997 9.184 1.00 55.20 N HETATM 160 C8 XGR A 8 18.828 3.241 8.845 1.00 53.66 C HETATM 161 N9 XGR A 8 17.547 3.672 8.754 1.00 54.33 N HETATM 162 C1' XGR A 8 17.148 5.001 8.346 1.00 56.79 C HETATM 163 C2' XGR A 8 16.975 5.975 9.510 1.00 58.81 C HETATM 164 C3' XGR A 8 18.307 6.450 10.080 1.00 58.49 C HETATM 165 O3' XGR A 8 18.043 7.361 11.122 1.00 61.33 O HETATM 166 C4' XGR A 8 19.176 7.144 9.043 1.00 54.84 C HETATM 167 C5' XGR A 8 20.615 7.174 9.515 1.00 53.16 C HETATM 168 O5' XGR A 8 21.182 5.953 9.122 1.00 54.32 O HETATM 169 C6' XGR A 8 19.103 6.414 7.732 1.00 55.32 C HETATM 170 C7' XGR A 8 18.220 5.479 7.409 1.00 54.86 C HETATM 171 OP1 XGR A 8 23.021 6.551 10.483 1.00 55.87 O HETATM 172 OP2 XGR A 8 22.556 4.085 9.781 1.00 55.96 O HETATM 173 P XGR A 9 18.449 6.941 12.593 1.00 61.45 P HETATM 174 O5' XGR A 9 17.934 8.242 13.377 1.00 63.46 O HETATM 175 OP1 XGR A 9 19.913 6.876 12.749 1.00 58.41 O HETATM 176 OP2 XGR A 9 17.513 5.881 12.958 1.00 62.25 O TER 177 XGR A 9 ATOM 178 O5' C B 1 11.436 -7.160 9.721 1.00 80.15 O ATOM 179 C5' C B 1 10.333 -6.852 10.550 1.00 78.89 C ATOM 180 C4' C B 1 9.813 -5.446 10.305 1.00 79.27 C ATOM 181 O4' C B 1 10.345 -4.557 11.339 1.00 78.98 O ATOM 182 C3' C B 1 10.207 -4.785 8.975 1.00 78.02 C ATOM 183 O3' C B 1 9.310 -5.005 7.920 1.00 77.95 O ATOM 184 C2' C B 1 10.212 -3.314 9.339 1.00 76.69 C ATOM 185 O2' C B 1 8.913 -2.775 9.330 1.00 75.01 O ATOM 186 C1' C B 1 10.856 -3.373 10.732 1.00 76.94 C ATOM 187 N1 C B 1 12.382 -3.460 10.598 1.00 74.71 N ATOM 188 C2 C B 1 13.158 -2.298 10.517 1.00 72.86 C ATOM 189 O2 C B 1 12.628 -1.190 10.613 1.00 73.14 O ATOM 190 N3 C B 1 14.492 -2.418 10.374 1.00 71.54 N ATOM 191 C4 C B 1 15.046 -3.616 10.285 1.00 68.63 C ATOM 192 N4 C B 1 16.350 -3.666 10.123 1.00 67.58 N ATOM 193 C5 C B 1 14.301 -4.808 10.327 1.00 69.50 C ATOM 194 C6 C B 1 12.990 -4.684 10.490 1.00 72.97 C ATOM 195 P G B 2 9.956 -5.258 6.480 1.00 79.86 P ATOM 196 OP1 G B 2 8.857 -5.594 5.578 1.00 82.06 O ATOM 197 OP2 G B 2 11.126 -6.173 6.570 1.00 77.58 O ATOM 198 O5' G B 2 10.477 -3.813 6.067 1.00 77.67 O ATOM 199 C5' G B 2 9.609 -2.694 6.041 1.00 73.96 C ATOM 200 C4' G B 2 10.346 -1.425 5.621 1.00 70.57 C ATOM 201 O4' G B 2 11.169 -0.959 6.724 1.00 71.88 O ATOM 202 C3' G B 2 11.321 -1.511 4.456 1.00 67.66 C ATOM 203 O3' G B 2 10.614 -1.373 3.297 1.00 64.35 O ATOM 204 C2' G B 2 12.073 -0.228 4.721 1.00 68.74 C ATOM 205 O2' G B 2 11.255 0.893 4.480 1.00 71.73 O ATOM 206 C1' G B 2 12.327 -0.340 6.213 1.00 68.01 C ATOM 207 N9 G B 2 13.515 -1.134 6.503 1.00 64.03 N ATOM 208 C8 G B 2 13.622 -2.461 6.812 1.00 61.87 C ATOM 209 N7 G B 2 14.850 -2.861 6.972 1.00 59.95 N ATOM 210 C5 G B 2 15.598 -1.724 6.764 1.00 58.64 C ATOM 211 C6 G B 2 16.985 -1.538 6.801 1.00 59.09 C ATOM 212 O6 G B 2 17.869 -2.381 7.058 1.00 58.39 O ATOM 213 N1 G B 2 17.325 -0.224 6.480 1.00 59.71 N ATOM 214 C2 G B 2 16.437 0.773 6.170 1.00 61.05 C ATOM 215 N2 G B 2 16.939 1.975 5.886 1.00 61.13 N ATOM 216 N3 G B 2 15.135 0.616 6.168 1.00 61.95 N ATOM 217 C4 G B 2 14.796 -0.660 6.466 1.00 62.11 C ATOM 218 P C B 3 11.198 -1.627 1.835 1.00 65.02 P ATOM 219 OP1 C B 3 10.057 -1.307 0.990 1.00 71.30 O ATOM 220 OP2 C B 3 11.850 -2.930 1.655 1.00 59.37 O ATOM 221 O5' C B 3 12.251 -0.450 1.623 1.00 68.89 O ATOM 222 C5' C B 3 11.819 0.908 1.415 1.00 68.82 C ATOM 223 C4' C B 3 13.011 1.801 1.082 1.00 68.38 C ATOM 224 O4' C B 3 13.842 1.983 2.253 1.00 68.23 O ATOM 225 C3' C B 3 14.002 1.256 0.061 1.00 67.47 C ATOM 226 O3' C B 3 13.541 1.466 -1.224 1.00 61.97 O ATOM 227 C2' C B 3 15.170 2.186 0.349 1.00 68.91 C ATOM 228 O2' C B 3 14.918 3.524 -0.044 1.00 70.94 O ATOM 229 C1' C B 3 15.202 2.089 1.870 1.00 66.12 C ATOM 230 N1 C B 3 16.030 0.927 2.362 1.00 61.63 N ATOM 231 C2 C B 3 17.434 1.040 2.438 1.00 62.41 C ATOM 232 O2 C B 3 17.978 2.109 2.141 1.00 65.33 O ATOM 233 N3 C B 3 18.178 -0.022 2.850 1.00 59.19 N ATOM 234 C4 C B 3 17.560 -1.140 3.195 1.00 56.23 C ATOM 235 N4 C B 3 18.307 -2.139 3.609 1.00 56.32 N ATOM 236 C5 C B 3 16.159 -1.294 3.127 1.00 54.95 C ATOM 237 C6 C B 3 15.442 -0.245 2.704 1.00 58.93 C ATOM 238 P U B 4 13.970 0.553 -2.439 1.00 62.13 P ATOM 239 OP1 U B 4 13.186 1.160 -3.524 1.00 67.29 O ATOM 240 OP2 U B 4 13.966 -0.871 -2.143 1.00 59.75 O ATOM 241 O5' U B 4 15.473 0.812 -2.774 1.00 62.71 O ATOM 242 C5' U B 4 15.869 2.106 -3.120 1.00 64.60 C ATOM 243 C4' U B 4 17.294 2.139 -3.458 1.00 60.63 C ATOM 244 O4' U B 4 17.966 2.089 -2.173 1.00 61.20 O ATOM 245 C3' U B 4 17.813 0.903 -4.081 1.00 62.02 C ATOM 246 O3' U B 4 17.313 0.808 -5.408 1.00 62.23 O ATOM 247 C2' U B 4 19.301 0.978 -3.768 1.00 60.87 C ATOM 248 O2' U B 4 20.041 1.817 -4.623 1.00 63.71 O ATOM 249 C1' U B 4 19.209 1.446 -2.305 1.00 58.24 C ATOM 250 N1 U B 4 19.244 0.270 -1.401 1.00 55.42 N ATOM 251 C2 U B 4 20.439 -0.329 -1.182 1.00 55.77 C ATOM 252 O2 U B 4 21.458 0.080 -1.618 1.00 63.80 O ATOM 253 N3 U B 4 20.470 -1.429 -0.421 1.00 53.66 N ATOM 254 C4 U B 4 19.415 -2.037 0.147 1.00 52.72 C ATOM 255 O4 U B 4 19.644 -3.036 0.806 1.00 53.74 O ATOM 256 C5 U B 4 18.159 -1.407 -0.122 1.00 52.24 C ATOM 257 C6 U B 4 18.116 -0.299 -0.880 1.00 55.47 C ATOM 258 P A B 5 17.759 -0.327 -6.436 1.00 59.64 P ATOM 259 OP1 A B 5 17.240 0.105 -7.729 1.00 63.38 O ATOM 260 OP2 A B 5 17.406 -1.647 -5.939 1.00 62.28 O ATOM 261 O5' A B 5 19.326 -0.266 -6.460 1.00 56.45 O ATOM 262 C5' A B 5 19.948 -0.966 -7.519 1.00 56.12 C ATOM 263 C4' A B 5 21.383 -1.132 -7.189 1.00 58.44 C ATOM 264 O4' A B 5 21.566 -0.823 -5.800 1.00 61.56 O ATOM 265 C3' A B 5 21.890 -2.514 -7.297 1.00 63.36 C ATOM 266 O3' A B 5 22.196 -2.763 -8.598 1.00 66.92 O ATOM 267 C2' A B 5 23.023 -2.624 -6.317 1.00 62.68 C ATOM 268 O2' A B 5 24.232 -2.172 -6.821 1.00 66.68 O ATOM 269 C1' A B 5 22.483 -1.743 -5.208 1.00 61.15 C ATOM 270 N9 A B 5 21.826 -2.560 -4.170 1.00 57.92 N ATOM 271 C8 A B 5 20.495 -2.570 -3.821 1.00 57.00 C ATOM 272 N7 A B 5 20.208 -3.426 -2.859 1.00 56.85 N ATOM 273 C5 A B 5 21.444 -4.006 -2.563 1.00 53.42 C ATOM 274 C6 A B 5 21.834 -4.972 -1.642 1.00 51.97 C ATOM 275 N6 A B 5 20.973 -5.544 -0.818 1.00 54.35 N ATOM 276 N1 A B 5 23.119 -5.342 -1.571 1.00 51.83 N ATOM 277 C2 A B 5 23.962 -4.762 -2.401 1.00 53.98 C ATOM 278 N3 A B 5 23.723 -3.829 -3.323 1.00 55.53 N ATOM 279 C4 A B 5 22.433 -3.491 -3.353 1.00 54.47 C ATOM 280 P C B 6 21.284 -3.838 -9.359 1.00 70.77 P ATOM 281 OP1 C B 6 21.364 -3.518 -10.794 1.00 76.42 O ATOM 282 OP2 C B 6 19.918 -3.995 -8.804 1.00 66.81 O ATOM 283 O5' C B 6 22.206 -5.099 -9.038 1.00 70.06 O ATOM 284 C5' C B 6 23.587 -4.953 -9.270 1.00 71.43 C ATOM 285 C4' C B 6 24.396 -5.946 -8.477 1.00 72.48 C ATOM 286 O4' C B 6 24.367 -5.524 -7.103 1.00 72.12 O ATOM 287 C3' C B 6 23.835 -7.352 -8.404 1.00 74.25 C ATOM 288 O3' C B 6 23.997 -8.089 -9.621 1.00 77.08 O ATOM 289 C2' C B 6 24.643 -7.863 -7.215 1.00 73.22 C ATOM 290 O2' C B 6 26.002 -8.106 -7.501 1.00 75.40 O ATOM 291 C1' C B 6 24.477 -6.673 -6.259 1.00 71.44 C ATOM 292 N1 C B 6 23.214 -6.796 -5.374 1.00 66.46 N ATOM 293 C2 C B 6 23.138 -7.665 -4.268 1.00 61.93 C ATOM 294 O2 C B 6 24.109 -8.342 -3.945 1.00 63.67 O ATOM 295 N3 C B 6 22.013 -7.760 -3.564 1.00 58.70 N ATOM 296 C4 C B 6 20.978 -7.037 -3.931 1.00 63.42 C ATOM 297 N4 C B 6 19.842 -7.135 -3.239 1.00 66.55 N ATOM 298 C5 C B 6 21.016 -6.159 -5.041 1.00 65.31 C ATOM 299 C6 C B 6 22.139 -6.062 -5.727 1.00 64.56 C ATOM 300 P G B 7 23.097 -9.381 -9.971 1.00 80.26 P ATOM 301 OP1 G B 7 23.747 -9.932 -11.166 1.00 82.61 O ATOM 302 OP2 G B 7 21.641 -9.126 -9.913 1.00 78.98 O ATOM 303 O5' G B 7 23.369 -10.435 -8.828 1.00 80.15 O ATOM 304 C5' G B 7 24.454 -11.317 -9.023 1.00 78.95 C ATOM 305 C4' G B 7 24.497 -12.221 -7.826 1.00 76.56 C ATOM 306 O4' G B 7 24.310 -11.358 -6.675 1.00 74.37 O ATOM 307 C3' G B 7 23.312 -13.163 -7.703 1.00 75.72 C ATOM 308 O3' G B 7 23.421 -14.331 -8.461 1.00 76.92 O ATOM 309 C2' G B 7 23.446 -13.438 -6.227 1.00 73.39 C ATOM 310 O2' G B 7 24.618 -14.180 -5.927 1.00 74.92 O ATOM 311 C1' G B 7 23.589 -12.050 -5.673 1.00 68.20 C ATOM 312 N9 G B 7 22.311 -11.399 -5.398 1.00 60.06 N ATOM 313 C8 G B 7 21.692 -10.322 -6.006 1.00 56.91 C ATOM 314 N7 G B 7 20.538 -10.014 -5.438 1.00 53.91 N ATOM 315 C5 G B 7 20.408 -10.936 -4.401 1.00 51.09 C ATOM 316 C6 G B 7 19.399 -11.114 -3.448 1.00 52.37 C ATOM 317 O6 G B 7 18.355 -10.464 -3.260 1.00 56.84 O ATOM 318 N1 G B 7 19.678 -12.191 -2.619 1.00 54.58 N ATOM 319 C2 G B 7 20.814 -12.993 -2.655 1.00 56.98 C ATOM 320 N2 G B 7 20.908 -14.008 -1.746 1.00 56.44 N ATOM 321 N3 G B 7 21.786 -12.810 -3.535 1.00 54.60 N ATOM 322 C4 G B 7 21.493 -11.781 -4.369 1.00 54.53 C ATOM 323 P C B 8 22.058 -14.895 -9.044 1.00 75.17 P ATOM 324 OP1 C B 8 22.522 -15.732 -10.158 1.00 80.05 O ATOM 325 OP2 C B 8 21.062 -13.798 -9.242 1.00 73.18 O ATOM 326 O5' C B 8 21.526 -15.830 -7.875 1.00 72.24 O ATOM 327 C5' C B 8 22.277 -16.938 -7.457 1.00 68.03 C ATOM 328 C4' C B 8 21.658 -17.361 -6.155 1.00 65.14 C ATOM 329 O4' C B 8 21.244 -16.168 -5.481 1.00 61.09 O ATOM 330 C3' C B 8 20.332 -17.992 -6.379 1.00 67.43 C ATOM 331 O3' C B 8 20.490 -19.362 -6.717 1.00 74.60 O ATOM 332 C2' C B 8 19.627 -17.753 -5.048 1.00 66.25 C ATOM 333 O2' C B 8 19.754 -18.778 -4.098 1.00 71.51 O ATOM 334 C1' C B 8 20.262 -16.480 -4.548 1.00 59.25 C ATOM 335 N1 C B 8 19.310 -15.423 -4.672 1.00 55.55 N ATOM 336 C2 C B 8 18.177 -15.350 -3.840 1.00 55.26 C ATOM 337 O2 C B 8 18.000 -16.204 -2.953 1.00 60.19 O ATOM 338 N3 C B 8 17.301 -14.326 -4.016 1.00 52.66 N ATOM 339 C4 C B 8 17.503 -13.447 -5.006 1.00 50.93 C ATOM 340 N4 C B 8 16.614 -12.463 -5.190 1.00 49.28 N ATOM 341 C5 C B 8 18.627 -13.541 -5.872 1.00 52.03 C ATOM 342 C6 C B 8 19.505 -14.530 -5.679 1.00 54.21 C TER 343 C B 8 HETATM 344 MG MG A 100 22.698 -4.889 6.723 1.00 59.22 MG HETATM 345 MG MG A 200 21.962 0.016 11.400 0.50 37.01 MG HETATM 346 O HOH A 14 24.789 -13.187 -1.607 1.00 73.45 O HETATM 347 O HOH A 15 24.515 -8.894 6.414 1.00 80.92 O HETATM 348 O HOH A 17 18.074 -9.566 2.861 1.00 65.21 O HETATM 349 O HOH A 20 10.969 -6.593 1.011 1.00 69.55 O HETATM 350 O HOH A 22 11.450 -9.516 2.775 1.00 79.37 O HETATM 351 O HOH A 23 29.428 0.162 8.657 1.00 64.28 O HETATM 352 O HOH A 24 21.170 3.714 11.778 1.00 72.86 O HETATM 353 O HOH A 25 26.298 -2.054 7.240 1.00 61.53 O HETATM 354 O HOH A 28 21.949 8.226 12.916 1.00 70.24 O HETATM 355 O HOH A 33 24.170 10.715 12.677 1.00 52.75 O HETATM 356 O HOH A 34 28.658 -2.730 10.428 1.00 66.64 O HETATM 357 O HOH A 35 26.495 -4.077 11.153 1.00 63.58 O HETATM 358 O HOH A 101 23.479 -6.267 5.290 1.00 60.24 O HETATM 359 O HOH A 102 21.905 -3.608 8.234 1.00 64.53 O HETATM 360 O HOH A 103 24.084 -5.532 8.207 1.00 64.23 O HETATM 361 O HOH A 104 24.050 -3.337 6.115 1.00 62.75 O HETATM 362 O HOH A 105 21.269 -6.334 7.383 1.00 65.50 O HETATM 363 O HOH A 106 21.376 -4.247 5.166 1.00 64.15 O HETATM 364 O HOH A 107 20.603 -11.540 8.832 1.00 59.98 O HETATM 365 O HOH A 108 19.365 -17.636 -0.159 1.00 69.05 O HETATM 366 O HOH A 109 16.528 10.102 15.363 1.00 60.42 O HETATM 367 O HOH A 110 18.123 11.136 13.492 1.00 60.33 O HETATM 368 O HOH A 111 15.612 -13.288 8.847 1.00 65.01 O HETATM 369 O HOH A 201 22.726 -1.490 12.747 0.50 42.75 O HETATM 370 O HOH A 202 21.216 1.539 10.043 0.50 40.59 O HETATM 371 O HOH A 203 23.760 -0.183 10.190 0.50 40.47 O HETATM 372 O HOH A 204 22.957 1.570 12.522 0.50 42.11 O HETATM 373 O HOH A 205 20.932 -1.537 10.300 0.50 39.30 O HETATM 374 O HOH A 206 20.184 0.350 12.586 0.50 43.09 O HETATM 375 O HOH B 9 13.854 3.325 -6.216 1.00 67.20 O HETATM 376 O HOH B 10 18.411 -8.590 -5.967 1.00 61.06 O HETATM 377 O HOH B 11 21.472 -0.428 -11.087 1.00 76.16 O HETATM 378 O HOH B 12 23.030 -15.941 -1.428 1.00 83.75 O HETATM 379 O HOH B 13 9.871 -0.674 10.386 1.00 80.24 O HETATM 380 O HOH B 14 17.245 -6.725 -5.078 1.00 61.55 O HETATM 381 O HOH B 15 14.689 -5.890 6.561 1.00 72.44 O HETATM 382 O HOH B 16 13.796 -2.861 0.186 1.00 69.00 O HETATM 383 O HOH B 17 18.670 3.890 -6.997 1.00 65.80 O HETATM 384 O HOH B 18 14.255 -6.228 -3.792 1.00 79.83 O HETATM 385 O HOH B 19 10.995 -2.723 -3.119 1.00 68.80 O HETATM 386 O HOH B 21 16.349 -8.275 -3.709 1.00 67.08 O HETATM 387 O HOH B 26 16.765 -10.374 -7.709 1.00 55.87 O HETATM 388 O HOH B 27 16.074 -7.124 4.683 1.00 73.39 O HETATM 389 O HOH B 29 9.144 -0.399 -1.672 1.00 75.53 O HETATM 390 O HOH B 30 14.461 3.331 5.376 1.00 71.63 O HETATM 391 O HOH B 31 12.821 -7.598 6.129 1.00 67.54 O HETATM 392 O HOH B 32 16.027 -7.549 7.297 1.00 72.54 O CONECT 1 2 7 CONECT 2 1 3 4 CONECT 3 2 CONECT 4 2 5 CONECT 5 4 6 11 CONECT 6 5 7 9 CONECT 7 1 6 8 CONECT 8 7 CONECT 9 6 10 CONECT 10 9 11 CONECT 11 5 10 12 CONECT 12 11 13 20 CONECT 13 12 14 CONECT 14 13 15 16 CONECT 15 14 CONECT 16 14 17 19 CONECT 17 16 18 CONECT 18 17 CONECT 19 16 20 CONECT 20 12 19 CONECT 21 36 39 40 CONECT 22 23 29 30 CONECT 23 22 24 25 CONECT 24 23 CONECT 25 23 26 CONECT 26 25 27 28 CONECT 27 26 CONECT 28 26 29 CONECT 29 22 28 CONECT 30 22 31 38 CONECT 31 30 32 CONECT 32 31 33 34 CONECT 33 32 CONECT 34 32 35 37 CONECT 35 34 36 CONECT 36 21 35 CONECT 37 34 38 CONECT 38 30 37 CONECT 39 21 CONECT 40 21 CONECT 41 59 62 63 CONECT 42 43 48 CONECT 43 42 44 45 CONECT 44 43 CONECT 45 43 46 CONECT 46 45 47 52 CONECT 47 46 48 50 CONECT 48 42 47 49 CONECT 49 48 CONECT 50 47 51 CONECT 51 50 52 CONECT 52 46 51 53 CONECT 53 52 54 61 CONECT 54 53 55 CONECT 55 54 56 57 CONECT 56 55 CONECT 57 55 58 60 CONECT 58 57 59 CONECT 59 41 58 CONECT 60 57 61 CONECT 61 53 60 CONECT 62 41 CONECT 63 41 CONECT 64 66 78 83 CONECT 65 66 67 CONECT 66 64 65 CONECT 67 65 76 77 CONECT 68 69 CONECT 69 68 70 73 CONECT 70 69 71 72 CONECT 71 70 CONECT 72 70 76 CONECT 73 69 74 CONECT 74 73 75 76 CONECT 75 74 CONECT 76 67 72 74 CONECT 77 67 78 CONECT 78 64 77 84 CONECT 79 80 81 82 CONECT 80 79 CONECT 81 79 CONECT 82 79 83 CONECT 83 64 82 CONECT 84 78 86 CONECT 85 86 CONECT 86 84 85 87 88 CONECT 87 86 CONECT 88 86 89 CONECT 89 88 90 CONECT 90 89 91 96 CONECT 91 90 92 93 CONECT 92 91 CONECT 93 91 94 CONECT 94 93 95 97 CONECT 95 94 96 CONECT 96 90 95 CONECT 97 94 98 101 CONECT 98 97 99 CONECT 99 98 100 CONECT 100 99 101 103 CONECT 101 97 100 102 CONECT 102 101 106 CONECT 103 100 104 105 CONECT 104 103 CONECT 105 103 106 CONECT 106 102 105 CONECT 107 125 128 129 CONECT 108 109 114 CONECT 109 108 110 111 CONECT 110 109 CONECT 111 109 112 CONECT 112 111 113 118 CONECT 113 112 114 116 CONECT 114 108 113 115 CONECT 115 114 CONECT 116 113 117 CONECT 117 116 118 CONECT 118 112 117 119 CONECT 119 118 120 127 CONECT 120 119 121 CONECT 121 120 122 123 CONECT 122 121 CONECT 123 121 124 126 CONECT 124 123 125 CONECT 125 107 124 CONECT 126 123 127 CONECT 127 119 126 CONECT 128 107 CONECT 129 107 CONECT 130 145 148 149 CONECT 131 132 138 139 CONECT 132 131 133 134 CONECT 133 132 CONECT 134 132 135 CONECT 135 134 136 137 CONECT 136 135 CONECT 137 135 138 CONECT 138 131 137 CONECT 139 131 140 147 CONECT 140 139 141 CONECT 141 140 142 143 CONECT 142 141 CONECT 143 141 144 146 CONECT 144 143 145 CONECT 145 130 144 CONECT 146 143 147 CONECT 147 139 146 CONECT 148 130 CONECT 149 130 CONECT 150 168 171 172 CONECT 151 152 157 CONECT 152 151 153 154 CONECT 153 152 CONECT 154 152 155 CONECT 155 154 156 161 CONECT 156 155 157 159 CONECT 157 151 156 158 CONECT 158 157 CONECT 159 156 160 CONECT 160 159 161 CONECT 161 155 160 162 CONECT 162 161 163 170 CONECT 163 162 164 CONECT 164 163 165 166 CONECT 165 164 CONECT 166 164 167 169 CONECT 167 166 168 CONECT 168 150 167 CONECT 169 166 170 CONECT 170 162 169 CONECT 171 150 CONECT 172 150 CONECT 173 174 175 176 CONECT 174 173 CONECT 175 173 CONECT 176 173 CONECT 344 358 359 360 361 CONECT 344 362 363 CONECT 345 369 370 371 372 CONECT 345 373 374 CONECT 358 344 CONECT 359 344 CONECT 360 344 CONECT 361 344 CONECT 362 344 CONECT 363 344 CONECT 369 345 CONECT 370 345 CONECT 371 345 CONECT 372 345 CONECT 373 345 CONECT 374 345 MASTER 318 0 11 0 0 0 4 6 390 2 192 2 END