data_3NX5 # _entry.id 3NX5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3NX5 pdb_00003nx5 10.2210/pdb3nx5/pdb NDB NA0626 ? ? RCSB RCSB060389 ? ? WWPDB D_1000060389 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3NP6 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 3NX5 _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2010-07-13 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ferraroni, M.' 1 'Bazzicalupi, C.' 2 'Gratteri, P.' 3 'Bilia, A.R.' 4 # _citation.id primary _citation.title ;X-Ray diffraction analyses of the natural isoquinoline alkaloids Berberine and Sanguinarine complexed with double helix DNA d(CGTACG) ; _citation.journal_abbrev 'Chem.Commun.(Camb.)' _citation.journal_volume 47 _citation.page_first 4917 _citation.page_last 4919 _citation.year 2011 _citation.journal_id_ASTM ? _citation.country UK _citation.journal_id_ISSN 1359-7345 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21431128 _citation.pdbx_database_id_DOI 10.1039/c1cc10971e # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ferraroni, M.' 1 ? primary 'Bazzicalupi, C.' 2 ? primary 'Bilia, A.R.' 3 ? primary 'Gratteri, P.' 4 ? # _cell.length_a 29.992 _cell.length_b 29.992 _cell.length_c 119.069 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.entry_id 3NX5 _cell.pdbx_unique_axis ? _cell.Z_PDB 24 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.entry_id 3NX5 _symmetry.Int_Tables_number 154 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*CP*GP*TP*AP*CP*G)-3'" 1809.217 4 ? ? ? ? 2 non-polymer syn '13-methyl[1,3]benzodioxolo[5,6-c][1,3]dioxolo[4,5-i]phenanthridin-13-ium' 332.329 1 ? ? ? ? 3 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 4 water nat water 18.015 5 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DC)(DG)(DT)(DA)(DC)(DG)' _entity_poly.pdbx_seq_one_letter_code_can CGTACG _entity_poly.pdbx_strand_id A,B,C,D _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DG n 1 3 DT n 1 4 DA n 1 5 DC n 1 6 DG n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'Synthetic DNA' # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 3NX5 _struct_ref.pdbx_db_accession 3NX5 _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3NX5 A 1 ? 6 ? 3NX5 1 ? 6 ? 1 6 2 1 3NX5 B 1 ? 6 ? 3NX5 7 ? 12 ? 7 12 3 1 3NX5 C 1 ? 6 ? 3NX5 1 ? 6 ? 1 6 4 1 3NX5 D 1 ? 6 ? 3NX5 7 ? 12 ? 7 12 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 SAU non-polymer . '13-methyl[1,3]benzodioxolo[5,6-c][1,3]dioxolo[4,5-i]phenanthridin-13-ium' Sanguinarine 'C20 H14 N O4 1' 332.329 # _exptl.crystals_number 1 _exptl.entry_id 3NX5 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.density_Matthews 2.14 _exptl_crystal.density_diffrn ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_percent_sol 42.42 _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.temp 296 _exptl_crystal_grow.pdbx_details 'MPD, MgCl2, NaCl, pH 6.5, vapor diffusion, temperature 296K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2010-02-08 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Si(111) monochromator' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9763 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID29' _diffrn_source.pdbx_wavelength_list 0.9763 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID29 # _reflns.entry_id 3NX5 _reflns.d_resolution_high 2.290 _reflns.number_obs 3006 _reflns.pdbx_Rmerge_I_obs 0.051 _reflns.pdbx_netI_over_sigmaI 20.990 _reflns.percent_possible_obs 96.300 _reflns.B_iso_Wilson_estimate 47.698 _reflns.observed_criterion_sigma_I -3.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 39.69 _reflns.number_all ? _reflns.pdbx_Rsym_value 0.051 _reflns.pdbx_redundancy 4.9 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.pdbx_rejects _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.meanI_over_sigI_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.290 2.430 1139 ? 400 ? 0.112 6.5 ? ? ? ? ? 470 ? ? 0.125 ? ? 85.100 0.133 ? 1 1 2.430 2.600 2497 ? 473 ? 0.094 13.8 ? ? ? ? ? 473 ? ? 0.069 ? ? 100.000 0.105 ? 2 1 2.600 2.810 2351 ? 415 ? 0.076 19.5 ? ? ? ? ? 416 ? ? 0.044 ? ? 99.800 0.084 ? 3 1 2.810 3.070 2171 ? 399 ? 0.064 23.3 ? ? ? ? ? 399 ? ? 0.037 ? ? 100.000 0.071 ? 4 1 3.070 3.430 1957 ? 365 ? 0.045 27.1 ? ? ? ? ? 368 ? ? 0.025 ? ? 99.200 0.050 ? 5 1 3.430 3.960 1752 ? 330 ? 0.053 28.7 ? ? ? ? ? 331 ? ? 0.031 ? ? 99.700 0.059 ? 6 1 3.960 4.840 1436 ? 280 ? 0.048 28.5 ? ? ? ? ? 280 ? ? 0.028 ? ? 100.000 0.054 ? 7 1 4.840 6.790 1093 ? 232 ? 0.049 27.6 ? ? ? ? ? 238 ? ? 0.027 ? ? 97.500 0.055 ? 8 1 6.790 39.69 451 ? 112 ? 0.040 25.2 ? ? ? ? ? 148 ? ? 0.022 ? ? 75.700 0.046 ? 9 1 # _refine.entry_id 3NX5 _refine.ls_d_res_high 2.3100 _refine.ls_d_res_low 39.6900 _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 97.7300 _refine.ls_number_reflns_obs 2719 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'U VALUES: REFINED INDIVIDUALLY' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2552 _refine.ls_R_factor_R_work 0.2521 _refine.ls_wR_factor_R_work 0.2852 _refine.ls_R_factor_R_free 0.2833 _refine.ls_wR_factor_R_free 0.3248 _refine.ls_percent_reflns_R_free 9.6000 _refine.ls_number_reflns_R_free 289 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 33.9258 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -22.2700 _refine.aniso_B[2][2] -22.2700 _refine.aniso_B[3][3] 44.5400 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9210 _refine.correlation_coeff_Fo_to_Fc_free 0.8920 _refine.overall_SU_R_Cruickshank_DPI 0.0981 _refine.overall_SU_R_free 0.0596 _refine.pdbx_overall_ESU_R_Free 0.0600 _refine.overall_SU_ML 0.2940 _refine.overall_SU_B 14.1560 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.4000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 'PDB ENTRY 3NP6' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.5756 _refine.B_iso_max 60.940 _refine.B_iso_min 13.330 _refine.occupancy_max 1.000 _refine.occupancy_min 1.000 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 450 _refine_hist.pdbx_number_atoms_ligand 26 _refine_hist.number_atoms_solvent 5 _refine_hist.number_atoms_total 481 _refine_hist.d_res_high 2.3100 _refine_hist.d_res_low 39.6900 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 532 0.010 0.021 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 816 2.403 3.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 87 0.063 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 257 0.007 0.020 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 3 0.495 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 3 1.129 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 529 1.469 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 813 2.387 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 2.3050 _refine_ls_shell.d_res_low 2.3650 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 87.6700 _refine_ls_shell.number_reflns_R_work 168 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.7900 _refine_ls_shell.R_factor_R_free 0.9740 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 24 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 192 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.redundancy_reflns_obs ? # _struct.entry_id 3NX5 _struct.title 'The crystal structure of Sanguinarine bound to DNA d(CGTACG)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3NX5 _struct_keywords.text 'DRUG-DNA COMPLEX, DOUBLE HELIX, DNA' _struct_keywords.pdbx_keywords DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 2 ? F N N 3 ? G N N 4 ? H N N 4 ? I N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? F CA . CA ? ? ? 1_555 D DG 6 OP2 ? ? D CA 1 D DG 12 1_555 ? ? ? ? ? ? ? 1.884 ? ? hydrog1 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DC 5 N3 ? ? A DG 2 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DC 5 O2 ? ? A DG 2 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DC 5 N4 ? ? A DG 2 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 2 N2 ? ? ? 1_555 D DG 6 N3 ? ? A DG 2 D DG 12 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog5 hydrog ? ? A DG 2 N3 ? ? ? 1_555 D DG 6 N2 ? ? A DG 2 D DG 12 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog6 hydrog ? ? A DT 3 N3 ? ? ? 1_555 B DA 4 N1 ? ? A DT 3 B DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DT 3 O4 ? ? ? 1_555 B DA 4 N6 ? ? A DT 3 B DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DA 4 N1 ? ? ? 1_555 B DT 3 N3 ? ? A DA 4 B DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DA 4 N6 ? ? ? 1_555 B DT 3 O4 ? ? A DA 4 B DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DC 5 N3 ? ? ? 1_555 B DG 2 N1 ? ? A DC 5 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DC 5 N4 ? ? ? 1_555 B DG 2 O6 ? ? A DC 5 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DC 5 O2 ? ? ? 1_555 B DG 2 N2 ? ? A DC 5 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DG 6 N2 ? ? ? 1_555 C DG 2 N3 ? ? B DG 12 C DG 2 1_555 ? ? ? ? ? ? 'DG-DG MISPAIR' ? ? ? hydrog14 hydrog ? ? C DG 2 N1 ? ? ? 1_555 D DC 5 N3 ? ? C DG 2 D DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C DG 2 N2 ? ? ? 1_555 D DC 5 O2 ? ? C DG 2 D DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C DG 2 O6 ? ? ? 1_555 D DC 5 N4 ? ? C DG 2 D DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C DT 3 N3 ? ? ? 1_555 D DA 4 N1 ? ? C DT 3 D DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DT 3 O4 ? ? ? 1_555 D DA 4 N6 ? ? C DT 3 D DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DA 4 N1 ? ? ? 1_555 D DT 3 N3 ? ? C DA 4 D DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DA 4 N6 ? ? ? 1_555 D DT 3 O4 ? ? C DA 4 D DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DC 5 N3 ? ? ? 1_555 D DG 2 N1 ? ? C DC 5 D DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DC 5 N4 ? ? ? 1_555 D DG 2 O6 ? ? C DC 5 D DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DC 5 O2 ? ? ? 1_555 D DG 2 N2 ? ? C DC 5 D DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software C SAU 7 ? 6 'BINDING SITE FOR RESIDUE SAU C 7' AC2 Software D CA 1 ? 3 'BINDING SITE FOR RESIDUE CA D 1' 1 ? ? ? ? ? ? ? # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 DC A 5 ? DC A 5 . ? 1_445 ? 2 AC1 6 DC B 1 ? DC B 7 . ? 5_565 ? 3 AC1 6 DG B 2 ? DG B 8 . ? 1_445 ? 4 AC1 6 DC C 5 ? DC C 5 . ? 1_555 ? 5 AC1 6 DG C 6 ? DG C 6 . ? 1_555 ? 6 AC1 6 DG D 2 ? DG D 8 . ? 1_555 ? 7 AC2 3 DG B 6 ? DG B 12 . ? 4_555 ? 8 AC2 3 DG D 6 ? DG D 12 . ? 4_555 ? 9 AC2 3 DG D 6 ? DG D 12 . ? 1_555 ? # _atom_sites.entry_id 3NX5 _atom_sites.fract_transf_matrix[1][1] 0.033342 _atom_sites.fract_transf_matrix[1][2] 0.019250 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.038500 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008398 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CA N O P # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 O "O3'" . DC A 1 1 ? 7.541 9.478 16.921 1.00 38.87 ? 1 DC A "O3'" 1 ATOM 2 P P . DG A 1 2 ? 6.893 8.018 16.798 1.00 40.34 ? 2 DG A P 1 ATOM 3 O OP1 . DG A 1 2 ? 5.458 8.190 17.143 1.00 38.10 ? 2 DG A OP1 1 ATOM 4 O OP2 . DG A 1 2 ? 7.819 7.072 17.479 1.00 38.63 ? 2 DG A OP2 1 ATOM 5 O "O5'" . DG A 1 2 ? 6.947 7.623 15.231 1.00 40.98 ? 2 DG A "O5'" 1 ATOM 6 C "C5'" . DG A 1 2 ? 8.105 6.984 14.603 1.00 38.54 ? 2 DG A "C5'" 1 ATOM 7 C "C4'" . DG A 1 2 ? 8.502 7.587 13.247 1.00 35.27 ? 2 DG A "C4'" 1 ATOM 8 O "O4'" . DG A 1 2 ? 7.462 8.374 12.608 1.00 33.51 ? 2 DG A "O4'" 1 ATOM 9 C "C3'" . DG A 1 2 ? 9.704 8.508 13.278 1.00 35.23 ? 2 DG A "C3'" 1 ATOM 10 O "O3'" . DG A 1 2 ? 10.488 8.091 12.188 1.00 35.71 ? 2 DG A "O3'" 1 ATOM 11 C "C2'" . DG A 1 2 ? 9.126 9.915 13.112 1.00 33.56 ? 2 DG A "C2'" 1 ATOM 12 C "C1'" . DG A 1 2 ? 7.880 9.683 12.273 1.00 31.80 ? 2 DG A "C1'" 1 ATOM 13 N N9 . DG A 1 2 ? 6.731 10.571 12.516 1.00 30.25 ? 2 DG A N9 1 ATOM 14 C C8 . DG A 1 2 ? 6.135 10.820 13.730 1.00 29.87 ? 2 DG A C8 1 ATOM 15 N N7 . DG A 1 2 ? 5.108 11.623 13.676 1.00 29.54 ? 2 DG A N7 1 ATOM 16 C C5 . DG A 1 2 ? 5.001 11.935 12.333 1.00 28.63 ? 2 DG A C5 1 ATOM 17 C C6 . DG A 1 2 ? 4.063 12.772 11.682 1.00 29.02 ? 2 DG A C6 1 ATOM 18 O O6 . DG A 1 2 ? 3.123 13.416 12.181 1.00 29.56 ? 2 DG A O6 1 ATOM 19 N N1 . DG A 1 2 ? 4.281 12.835 10.304 1.00 28.35 ? 2 DG A N1 1 ATOM 20 C C2 . DG A 1 2 ? 5.283 12.164 9.653 1.00 28.21 ? 2 DG A C2 1 ATOM 21 N N2 . DG A 1 2 ? 5.315 12.361 8.329 1.00 27.88 ? 2 DG A N2 1 ATOM 22 N N3 . DG A 1 2 ? 6.176 11.367 10.253 1.00 28.95 ? 2 DG A N3 1 ATOM 23 C C4 . DG A 1 2 ? 5.983 11.298 11.600 1.00 29.29 ? 2 DG A C4 1 ATOM 24 P P . DT A 1 3 ? 12.049 8.391 12.043 1.00 36.39 ? 3 DT A P 1 ATOM 25 O OP1 . DT A 1 3 ? 12.643 7.178 11.431 1.00 35.64 ? 3 DT A OP1 1 ATOM 26 O OP2 . DT A 1 3 ? 12.615 9.009 13.271 1.00 36.24 ? 3 DT A OP2 1 ATOM 27 O "O5'" . DT A 1 3 ? 11.984 9.563 10.958 1.00 36.96 ? 3 DT A "O5'" 1 ATOM 28 C "C5'" . DT A 1 3 ? 11.458 9.366 9.632 1.00 34.48 ? 3 DT A "C5'" 1 ATOM 29 C "C4'" . DT A 1 3 ? 11.246 10.722 8.980 1.00 33.45 ? 3 DT A "C4'" 1 ATOM 30 O "O4'" . DT A 1 3 ? 10.154 11.394 9.635 1.00 32.15 ? 3 DT A "O4'" 1 ATOM 31 C "C3'" . DT A 1 3 ? 12.410 11.719 9.068 1.00 33.90 ? 3 DT A "C3'" 1 ATOM 32 O "O3'" . DT A 1 3 ? 12.831 11.938 7.724 1.00 35.79 ? 3 DT A "O3'" 1 ATOM 33 C "C2'" . DT A 1 3 ? 11.837 12.967 9.754 1.00 31.80 ? 3 DT A "C2'" 1 ATOM 34 C "C1'" . DT A 1 3 ? 10.348 12.786 9.478 1.00 31.12 ? 3 DT A "C1'" 1 ATOM 35 N N1 . DT A 1 3 ? 9.308 13.489 10.328 1.00 29.40 ? 3 DT A N1 1 ATOM 36 C C2 . DT A 1 3 ? 8.360 14.264 9.698 1.00 29.67 ? 3 DT A C2 1 ATOM 37 O O2 . DT A 1 3 ? 8.314 14.462 8.502 1.00 29.69 ? 3 DT A O2 1 ATOM 38 N N3 . DT A 1 3 ? 7.443 14.844 10.521 1.00 30.25 ? 3 DT A N3 1 ATOM 39 C C4 . DT A 1 3 ? 7.355 14.735 11.891 1.00 30.20 ? 3 DT A C4 1 ATOM 40 O O4 . DT A 1 3 ? 6.461 15.323 12.510 1.00 30.54 ? 3 DT A O4 1 ATOM 41 C C5 . DT A 1 3 ? 8.369 13.902 12.493 1.00 29.40 ? 3 DT A C5 1 ATOM 42 C C7 . DT A 1 3 ? 8.420 13.687 13.979 1.00 30.71 ? 3 DT A C7 1 ATOM 43 C C6 . DT A 1 3 ? 9.277 13.328 11.697 1.00 28.92 ? 3 DT A C6 1 ATOM 44 P P . DA A 1 4 ? 14.117 12.751 7.232 1.00 34.82 ? 4 DA A P 1 ATOM 45 O OP1 . DA A 1 4 ? 14.614 12.012 6.051 1.00 34.77 ? 4 DA A OP1 1 ATOM 46 O OP2 . DA A 1 4 ? 15.051 13.147 8.293 1.00 33.82 ? 4 DA A OP2 1 ATOM 47 O "O5'" . DA A 1 4 ? 13.330 14.036 6.774 1.00 34.00 ? 4 DA A "O5'" 1 ATOM 48 C "C5'" . DA A 1 4 ? 12.369 13.832 5.782 1.00 36.20 ? 4 DA A "C5'" 1 ATOM 49 C "C4'" . DA A 1 4 ? 11.733 15.168 5.528 1.00 38.34 ? 4 DA A "C4'" 1 ATOM 50 O "O4'" . DA A 1 4 ? 10.882 15.443 6.652 1.00 38.46 ? 4 DA A "O4'" 1 ATOM 51 C "C3'" . DA A 1 4 ? 12.722 16.316 5.489 1.00 39.82 ? 4 DA A "C3'" 1 ATOM 52 O "O3'" . DA A 1 4 ? 12.830 16.743 4.122 1.00 43.72 ? 4 DA A "O3'" 1 ATOM 53 C "C2'" . DA A 1 4 ? 12.134 17.376 6.427 1.00 38.44 ? 4 DA A "C2'" 1 ATOM 54 C "C1'" . DA A 1 4 ? 10.781 16.825 6.867 1.00 37.00 ? 4 DA A "C1'" 1 ATOM 55 N N9 . DA A 1 4 ? 10.496 16.950 8.293 1.00 35.23 ? 4 DA A N9 1 ATOM 56 C C8 . DA A 1 4 ? 11.262 16.439 9.306 1.00 34.64 ? 4 DA A C8 1 ATOM 57 N N7 . DA A 1 4 ? 10.795 16.686 10.506 1.00 34.65 ? 4 DA A N7 1 ATOM 58 C C5 . DA A 1 4 ? 9.632 17.396 10.265 1.00 33.11 ? 4 DA A C5 1 ATOM 59 C C6 . DA A 1 4 ? 8.678 17.946 11.134 1.00 32.51 ? 4 DA A C6 1 ATOM 60 N N6 . DA A 1 4 ? 8.769 17.839 12.460 1.00 33.78 ? 4 DA A N6 1 ATOM 61 N N1 . DA A 1 4 ? 7.634 18.604 10.605 1.00 31.79 ? 4 DA A N1 1 ATOM 62 C C2 . DA A 1 4 ? 7.581 18.709 9.272 1.00 33.39 ? 4 DA A C2 1 ATOM 63 N N3 . DA A 1 4 ? 8.415 18.224 8.342 1.00 33.76 ? 4 DA A N3 1 ATOM 64 C C4 . DA A 1 4 ? 9.434 17.570 8.910 1.00 33.79 ? 4 DA A C4 1 ATOM 65 P P . DC A 1 5 ? 13.814 17.928 3.664 1.00 45.16 ? 5 DC A P 1 ATOM 66 O OP1 . DC A 1 5 ? 13.945 17.803 2.191 1.00 45.91 ? 5 DC A OP1 1 ATOM 67 O OP2 . DC A 1 5 ? 15.007 17.933 4.559 1.00 44.48 ? 5 DC A OP2 1 ATOM 68 O "O5'" . DC A 1 5 ? 13.009 19.271 3.962 1.00 43.87 ? 5 DC A "O5'" 1 ATOM 69 C "C5'" . DC A 1 5 ? 11.624 19.448 3.696 1.00 44.08 ? 5 DC A "C5'" 1 ATOM 70 C "C4'" . DC A 1 5 ? 11.174 20.635 4.540 1.00 44.51 ? 5 DC A "C4'" 1 ATOM 71 O "O4'" . DC A 1 5 ? 10.876 20.241 5.913 1.00 44.11 ? 5 DC A "O4'" 1 ATOM 72 C "C3'" . DC A 1 5 ? 12.251 21.709 4.674 1.00 44.24 ? 5 DC A "C3'" 1 ATOM 73 O "O3'" . DC A 1 5 ? 11.769 22.922 4.153 1.00 43.67 ? 5 DC A "O3'" 1 ATOM 74 C "C2'" . DC A 1 5 ? 12.551 21.790 6.176 1.00 43.37 ? 5 DC A "C2'" 1 ATOM 75 C "C1'" . DC A 1 5 ? 11.219 21.324 6.759 1.00 42.55 ? 5 DC A "C1'" 1 ATOM 76 N N1 . DC A 1 5 ? 11.232 20.900 8.212 1.00 40.28 ? 5 DC A N1 1 ATOM 77 C C2 . DC A 1 5 ? 10.212 21.311 9.098 1.00 39.71 ? 5 DC A C2 1 ATOM 78 O O2 . DC A 1 5 ? 9.281 22.032 8.696 1.00 38.79 ? 5 DC A O2 1 ATOM 79 N N3 . DC A 1 5 ? 10.283 20.895 10.398 1.00 39.00 ? 5 DC A N3 1 ATOM 80 C C4 . DC A 1 5 ? 11.296 20.120 10.822 1.00 38.64 ? 5 DC A C4 1 ATOM 81 N N4 . DC A 1 5 ? 11.333 19.722 12.103 1.00 37.36 ? 5 DC A N4 1 ATOM 82 C C5 . DC A 1 5 ? 12.326 19.699 9.933 1.00 38.68 ? 5 DC A C5 1 ATOM 83 C C6 . DC A 1 5 ? 12.255 20.110 8.662 1.00 39.39 ? 5 DC A C6 1 ATOM 84 P P . DG A 1 6 ? 12.824 23.998 3.646 1.00 45.77 ? 6 DG A P 1 ATOM 85 O OP1 . DG A 1 6 ? 12.234 24.541 2.405 1.00 48.15 ? 6 DG A OP1 1 ATOM 86 O OP2 . DG A 1 6 ? 14.193 23.404 3.649 1.00 43.14 ? 6 DG A OP2 1 ATOM 87 O "O5'" . DG A 1 6 ? 12.754 25.150 4.757 1.00 46.93 ? 6 DG A "O5'" 1 ATOM 88 C "C5'" . DG A 1 6 ? 11.745 26.144 4.720 1.00 49.88 ? 6 DG A "C5'" 1 ATOM 89 C "C4'" . DG A 1 6 ? 12.295 27.414 5.338 1.00 52.89 ? 6 DG A "C4'" 1 ATOM 90 O "O4'" . DG A 1 6 ? 13.001 27.043 6.548 1.00 53.41 ? 6 DG A "O4'" 1 ATOM 91 C "C3'" . DG A 1 6 ? 13.274 28.188 4.443 1.00 54.10 ? 6 DG A "C3'" 1 ATOM 92 O "O3'" . DG A 1 6 ? 13.015 29.600 4.455 1.00 54.77 ? 6 DG A "O3'" 1 ATOM 93 C "C2'" . DG A 1 6 ? 14.644 27.878 5.037 1.00 54.75 ? 6 DG A "C2'" 1 ATOM 94 C "C1'" . DG A 1 6 ? 14.317 27.541 6.494 1.00 55.15 ? 6 DG A "C1'" 1 ATOM 95 N N9 . DG A 1 6 ? 15.221 26.559 7.090 1.00 56.97 ? 6 DG A N9 1 ATOM 96 C C8 . DG A 1 6 ? 16.313 25.954 6.510 1.00 58.12 ? 6 DG A C8 1 ATOM 97 N N7 . DG A 1 6 ? 16.956 25.131 7.292 1.00 58.27 ? 6 DG A N7 1 ATOM 98 C C5 . DG A 1 6 ? 16.243 25.188 8.483 1.00 59.18 ? 6 DG A C5 1 ATOM 99 C C6 . DG A 1 6 ? 16.460 24.507 9.719 1.00 59.61 ? 6 DG A C6 1 ATOM 100 O O6 . DG A 1 6 ? 17.347 23.688 10.011 1.00 58.40 ? 6 DG A O6 1 ATOM 101 N N1 . DG A 1 6 ? 15.502 24.862 10.672 1.00 60.04 ? 6 DG A N1 1 ATOM 102 C C2 . DG A 1 6 ? 14.463 25.751 10.457 1.00 60.27 ? 6 DG A C2 1 ATOM 103 N N2 . DG A 1 6 ? 13.633 25.967 11.490 1.00 60.94 ? 6 DG A N2 1 ATOM 104 N N3 . DG A 1 6 ? 14.252 26.395 9.310 1.00 59.36 ? 6 DG A N3 1 ATOM 105 C C4 . DG A 1 6 ? 15.174 26.066 8.370 1.00 58.47 ? 6 DG A C4 1 ATOM 106 O "O5'" . DC B 1 1 ? -0.074 22.551 21.052 1.00 50.86 ? 7 DC B "O5'" 1 ATOM 107 C "C5'" . DC B 1 1 ? 0.509 23.863 21.117 1.00 50.26 ? 7 DC B "C5'" 1 ATOM 108 C "C4'" . DC B 1 1 ? 1.921 23.868 21.712 1.00 49.09 ? 7 DC B "C4'" 1 ATOM 109 O "O4'" . DC B 1 1 ? 1.876 24.152 23.139 1.00 49.14 ? 7 DC B "O4'" 1 ATOM 110 C "C3'" . DC B 1 1 ? 2.765 22.598 21.564 1.00 47.62 ? 7 DC B "C3'" 1 ATOM 111 O "O3'" . DC B 1 1 ? 4.140 22.961 21.341 1.00 45.51 ? 7 DC B "O3'" 1 ATOM 112 C "C2'" . DC B 1 1 ? 2.578 21.944 22.933 1.00 48.08 ? 7 DC B "C2'" 1 ATOM 113 C "C1'" . DC B 1 1 ? 2.632 23.182 23.831 1.00 48.56 ? 7 DC B "C1'" 1 ATOM 114 N N1 . DC B 1 1 ? 2.047 23.065 25.207 1.00 48.92 ? 7 DC B N1 1 ATOM 115 C C2 . DC B 1 1 ? 2.552 23.864 26.261 1.00 48.55 ? 7 DC B C2 1 ATOM 116 O O2 . DC B 1 1 ? 3.482 24.660 26.071 1.00 47.35 ? 7 DC B O2 1 ATOM 117 N N3 . DC B 1 1 ? 1.994 23.740 27.496 1.00 49.17 ? 7 DC B N3 1 ATOM 118 C C4 . DC B 1 1 ? 0.982 22.878 27.700 1.00 49.57 ? 7 DC B C4 1 ATOM 119 N N4 . DC B 1 1 ? 0.473 22.802 28.934 1.00 49.03 ? 7 DC B N4 1 ATOM 120 C C5 . DC B 1 1 ? 0.454 22.058 26.648 1.00 49.80 ? 7 DC B C5 1 ATOM 121 C C6 . DC B 1 1 ? 1.007 22.188 25.430 1.00 49.61 ? 7 DC B C6 1 ATOM 122 P P . DG B 1 2 ? 4.818 23.141 19.890 1.00 43.77 ? 8 DG B P 1 ATOM 123 O OP1 . DG B 1 2 ? 5.501 21.877 19.532 1.00 43.75 ? 8 DG B OP1 1 ATOM 124 O OP2 . DG B 1 2 ? 5.582 24.408 19.927 1.00 43.12 ? 8 DG B OP2 1 ATOM 125 O "O5'" . DG B 1 2 ? 3.587 23.360 18.900 1.00 42.19 ? 8 DG B "O5'" 1 ATOM 126 C "C5'" . DG B 1 2 ? 3.282 24.671 18.440 1.00 40.12 ? 8 DG B "C5'" 1 ATOM 127 C "C4'" . DG B 1 2 ? 3.732 24.844 17.008 1.00 39.13 ? 8 DG B "C4'" 1 ATOM 128 O "O4'" . DG B 1 2 ? 5.115 24.443 16.856 1.00 40.03 ? 8 DG B "O4'" 1 ATOM 129 C "C3'" . DG B 1 2 ? 3.057 23.912 16.024 1.00 38.03 ? 8 DG B "C3'" 1 ATOM 130 O "O3'" . DG B 1 2 ? 1.749 24.386 15.774 1.00 35.98 ? 8 DG B "O3'" 1 ATOM 131 C "C2'" . DG B 1 2 ? 4.001 24.011 14.821 1.00 38.07 ? 8 DG B "C2'" 1 ATOM 132 C "C1'" . DG B 1 2 ? 5.357 24.321 15.464 1.00 38.28 ? 8 DG B "C1'" 1 ATOM 133 N N9 . DG B 1 2 ? 6.396 23.317 15.251 1.00 36.47 ? 8 DG B N9 1 ATOM 134 C C8 . DG B 1 2 ? 7.056 22.578 16.198 1.00 36.86 ? 8 DG B C8 1 ATOM 135 N N7 . DG B 1 2 ? 7.937 21.744 15.709 1.00 36.34 ? 8 DG B N7 1 ATOM 136 C C5 . DG B 1 2 ? 7.853 21.957 14.349 1.00 35.78 ? 8 DG B C5 1 ATOM 137 C C6 . DG B 1 2 ? 8.569 21.355 13.299 1.00 35.63 ? 8 DG B C6 1 ATOM 138 O O6 . DG B 1 2 ? 9.447 20.489 13.378 1.00 35.65 ? 8 DG B O6 1 ATOM 139 N N1 . DG B 1 2 ? 8.194 21.853 12.054 1.00 35.98 ? 8 DG B N1 1 ATOM 140 C C2 . DG B 1 2 ? 7.233 22.815 11.836 1.00 36.72 ? 8 DG B C2 1 ATOM 141 N N2 . DG B 1 2 ? 6.997 23.164 10.558 1.00 36.09 ? 8 DG B N2 1 ATOM 142 N N3 . DG B 1 2 ? 6.554 23.394 12.822 1.00 37.50 ? 8 DG B N3 1 ATOM 143 C C4 . DG B 1 2 ? 6.918 22.919 14.049 1.00 36.81 ? 8 DG B C4 1 ATOM 144 P P . DT B 1 3 ? 0.665 23.370 15.206 1.00 35.92 ? 9 DT B P 1 ATOM 145 O OP1 . DT B 1 3 ? -0.673 23.995 15.325 1.00 35.59 ? 9 DT B OP1 1 ATOM 146 O OP2 . DT B 1 3 ? 0.981 22.032 15.767 1.00 33.74 ? 9 DT B OP2 1 ATOM 147 O "O5'" . DT B 1 3 ? 1.016 23.351 13.646 1.00 33.27 ? 9 DT B "O5'" 1 ATOM 148 C "C5'" . DT B 1 3 ? 0.447 24.295 12.745 1.00 30.43 ? 9 DT B "C5'" 1 ATOM 149 C "C4'" . DT B 1 3 ? 0.944 23.946 11.346 1.00 28.92 ? 9 DT B "C4'" 1 ATOM 150 O "O4'" . DT B 1 3 ? 2.313 23.427 11.380 1.00 27.36 ? 9 DT B "O4'" 1 ATOM 151 C "C3'" . DT B 1 3 ? 0.119 22.884 10.643 1.00 26.81 ? 9 DT B "C3'" 1 ATOM 152 O "O3'" . DT B 1 3 ? -0.098 23.347 9.333 1.00 27.78 ? 9 DT B "O3'" 1 ATOM 153 C "C2'" . DT B 1 3 ? 0.994 21.644 10.729 1.00 26.29 ? 9 DT B "C2'" 1 ATOM 154 C "C1'" . DT B 1 3 ? 2.405 22.207 10.698 1.00 25.71 ? 9 DT B "C1'" 1 ATOM 155 N N1 . DT B 1 3 ? 3.431 21.359 11.397 1.00 25.81 ? 9 DT B N1 1 ATOM 156 C C2 . DT B 1 3 ? 4.525 20.874 10.685 1.00 26.40 ? 9 DT B C2 1 ATOM 157 O O2 . DT B 1 3 ? 4.730 21.094 9.509 1.00 26.84 ? 9 DT B O2 1 ATOM 158 N N3 . DT B 1 3 ? 5.419 20.109 11.400 1.00 26.12 ? 9 DT B N3 1 ATOM 159 C C4 . DT B 1 3 ? 5.327 19.786 12.749 1.00 25.86 ? 9 DT B C4 1 ATOM 160 O O4 . DT B 1 3 ? 6.171 19.090 13.311 1.00 26.05 ? 9 DT B O4 1 ATOM 161 C C5 . DT B 1 3 ? 4.169 20.314 13.434 1.00 24.75 ? 9 DT B C5 1 ATOM 162 C C7 . DT B 1 3 ? 3.986 20.007 14.888 1.00 25.69 ? 9 DT B C7 1 ATOM 163 C C6 . DT B 1 3 ? 3.291 21.069 12.748 1.00 24.95 ? 9 DT B C6 1 ATOM 164 P P . DA B 1 4 ? -0.765 22.478 8.164 1.00 26.63 ? 10 DA B P 1 ATOM 165 O OP1 . DA B 1 4 ? -1.413 23.466 7.273 1.00 26.73 ? 10 DA B OP1 1 ATOM 166 O OP2 . DA B 1 4 ? -1.520 21.298 8.661 1.00 25.48 ? 10 DA B OP2 1 ATOM 167 O "O5'" . DA B 1 4 ? 0.576 21.879 7.570 1.00 24.60 ? 10 DA B "O5'" 1 ATOM 168 C "C5'" . DA B 1 4 ? 1.353 22.538 6.606 1.00 23.35 ? 10 DA B "C5'" 1 ATOM 169 C "C4'" . DA B 1 4 ? 1.888 21.443 5.699 1.00 21.50 ? 10 DA B "C4'" 1 ATOM 170 O "O4'" . DA B 1 4 ? 2.801 20.591 6.415 1.00 20.75 ? 10 DA B "O4'" 1 ATOM 171 C "C3'" . DA B 1 4 ? 0.846 20.499 5.094 1.00 21.70 ? 10 DA B "C3'" 1 ATOM 172 O "O3'" . DA B 1 4 ? 1.223 20.293 3.730 1.00 22.86 ? 10 DA B "O3'" 1 ATOM 173 C "C2'" . DA B 1 4 ? 0.934 19.224 5.945 1.00 20.23 ? 10 DA B "C2'" 1 ATOM 174 C "C1'" . DA B 1 4 ? 2.384 19.219 6.412 1.00 19.97 ? 10 DA B "C1'" 1 ATOM 175 N N9 . DA B 1 4 ? 2.647 18.706 7.768 1.00 17.79 ? 10 DA B N9 1 ATOM 176 C C8 . DA B 1 4 ? 1.948 19.009 8.903 1.00 17.73 ? 10 DA B C8 1 ATOM 177 N N7 . DA B 1 4 ? 2.432 18.451 9.996 1.00 18.58 ? 10 DA B N7 1 ATOM 178 C C5 . DA B 1 4 ? 3.522 17.729 9.553 1.00 17.11 ? 10 DA B C5 1 ATOM 179 C C6 . DA B 1 4 ? 4.458 16.908 10.215 1.00 18.54 ? 10 DA B C6 1 ATOM 180 N N6 . DA B 1 4 ? 4.412 16.666 11.526 1.00 21.79 ? 10 DA B N6 1 ATOM 181 N N1 . DA B 1 4 ? 5.447 16.332 9.489 1.00 17.77 ? 10 DA B N1 1 ATOM 182 C C2 . DA B 1 4 ? 5.465 16.571 8.167 1.00 16.15 ? 10 DA B C2 1 ATOM 183 N N3 . DA B 1 4 ? 4.632 17.328 7.453 1.00 15.32 ? 10 DA B N3 1 ATOM 184 C C4 . DA B 1 4 ? 3.676 17.885 8.191 1.00 15.92 ? 10 DA B C4 1 ATOM 185 P P . DC B 1 5 ? 0.346 19.417 2.729 1.00 24.05 ? 11 DC B P 1 ATOM 186 O OP1 . DC B 1 5 ? 0.756 19.945 1.409 1.00 27.43 ? 11 DC B OP1 1 ATOM 187 O OP2 . DC B 1 5 ? -1.087 19.335 3.090 1.00 21.30 ? 11 DC B OP2 1 ATOM 188 O "O5'" . DC B 1 5 ? 0.938 17.952 2.928 1.00 22.42 ? 11 DC B "O5'" 1 ATOM 189 C "C5'" . DC B 1 5 ? 2.292 17.656 2.656 1.00 23.08 ? 11 DC B "C5'" 1 ATOM 190 C "C4'" . DC B 1 5 ? 2.584 16.200 3.005 1.00 24.39 ? 11 DC B "C4'" 1 ATOM 191 O "O4'" . DC B 1 5 ? 2.752 16.022 4.450 1.00 25.51 ? 11 DC B "O4'" 1 ATOM 192 C "C3'" . DC B 1 5 ? 1.503 15.187 2.615 1.00 24.55 ? 11 DC B "C3'" 1 ATOM 193 O "O3'" . DC B 1 5 ? 2.106 13.995 2.106 1.00 24.18 ? 11 DC B "O3'" 1 ATOM 194 C "C2'" . DC B 1 5 ? 0.806 14.920 3.949 1.00 25.50 ? 11 DC B "C2'" 1 ATOM 195 C "C1'" . DC B 1 5 ? 2.044 14.861 4.847 1.00 25.14 ? 11 DC B "C1'" 1 ATOM 196 N N1 . DC B 1 5 ? 1.804 14.914 6.324 1.00 23.23 ? 11 DC B N1 1 ATOM 197 C C2 . DC B 1 5 ? 2.680 14.246 7.218 1.00 23.72 ? 11 DC B C2 1 ATOM 198 O O2 . DC B 1 5 ? 3.649 13.592 6.799 1.00 21.82 ? 11 DC B O2 1 ATOM 199 N N3 . DC B 1 5 ? 2.444 14.332 8.563 1.00 24.69 ? 11 DC B N3 1 ATOM 200 C C4 . DC B 1 5 ? 1.384 15.041 8.998 1.00 25.53 ? 11 DC B C4 1 ATOM 201 N N4 . DC B 1 5 ? 1.178 15.106 10.320 1.00 26.17 ? 11 DC B N4 1 ATOM 202 C C5 . DC B 1 5 ? 0.492 15.723 8.096 1.00 24.76 ? 11 DC B C5 1 ATOM 203 C C6 . DC B 1 5 ? 0.733 15.635 6.780 1.00 23.05 ? 11 DC B C6 1 ATOM 204 P P . DG B 1 6 ? 1.210 12.928 1.331 1.00 25.18 ? 12 DG B P 1 ATOM 205 O OP1 . DG B 1 6 ? 2.154 12.027 0.624 1.00 23.19 ? 12 DG B OP1 1 ATOM 206 O OP2 . DG B 1 6 ? 0.112 13.658 0.650 1.00 24.90 ? 12 DG B OP2 1 ATOM 207 O "O5'" . DG B 1 6 ? 0.484 12.127 2.519 1.00 27.94 ? 12 DG B "O5'" 1 ATOM 208 C "C5'" . DG B 1 6 ? 1.236 11.262 3.390 1.00 27.96 ? 12 DG B "C5'" 1 ATOM 209 C "C4'" . DG B 1 6 ? 0.349 10.131 3.851 1.00 28.22 ? 12 DG B "C4'" 1 ATOM 210 O "O4'" . DG B 1 6 ? -0.798 10.704 4.532 1.00 28.91 ? 12 DG B "O4'" 1 ATOM 211 C "C3'" . DG B 1 6 ? -0.197 9.287 2.716 1.00 27.72 ? 12 DG B "C3'" 1 ATOM 212 O "O3'" . DG B 1 6 ? 0.531 8.104 2.677 1.00 27.87 ? 12 DG B "O3'" 1 ATOM 213 C "C2'" . DG B 1 6 ? -1.633 9.025 3.137 1.00 28.60 ? 12 DG B "C2'" 1 ATOM 214 C "C1'" . DG B 1 6 ? -1.989 10.310 3.875 1.00 30.66 ? 12 DG B "C1'" 1 ATOM 215 N N9 . DG B 1 6 ? -2.383 11.457 3.068 1.00 33.78 ? 12 DG B N9 1 ATOM 216 C C8 . DG B 1 6 ? -2.614 11.517 1.715 1.00 35.36 ? 12 DG B C8 1 ATOM 217 N N7 . DG B 1 6 ? -2.930 12.716 1.302 1.00 37.23 ? 12 DG B N7 1 ATOM 218 C C5 . DG B 1 6 ? -2.903 13.497 2.448 1.00 37.07 ? 12 DG B C5 1 ATOM 219 C C6 . DG B 1 6 ? -3.159 14.877 2.631 1.00 38.77 ? 12 DG B C6 1 ATOM 220 O O6 . DG B 1 6 ? -3.478 15.713 1.777 1.00 40.65 ? 12 DG B O6 1 ATOM 221 N N1 . DG B 1 6 ? -3.016 15.281 3.966 1.00 39.57 ? 12 DG B N1 1 ATOM 222 C C2 . DG B 1 6 ? -2.665 14.440 5.004 1.00 38.89 ? 12 DG B C2 1 ATOM 223 N N2 . DG B 1 6 ? -2.577 14.979 6.232 1.00 37.63 ? 12 DG B N2 1 ATOM 224 N N3 . DG B 1 6 ? -2.431 13.139 4.833 1.00 38.54 ? 12 DG B N3 1 ATOM 225 C C4 . DG B 1 6 ? -2.566 12.736 3.541 1.00 36.19 ? 12 DG B C4 1 ATOM 226 O "O3'" . DC C 1 1 ? -4.359 15.778 15.251 1.00 45.22 ? 1 DC C "O3'" 1 ATOM 227 P P . DG C 1 2 ? -4.481 17.187 14.495 1.00 46.43 ? 2 DG C P 1 ATOM 228 O OP1 . DG C 1 2 ? -3.365 18.053 14.964 1.00 44.53 ? 2 DG C OP1 1 ATOM 229 O OP2 . DG C 1 2 ? -5.917 17.583 14.570 1.00 44.81 ? 2 DG C OP2 1 ATOM 230 O "O5'" . DG C 1 2 ? -4.146 16.836 12.966 1.00 44.94 ? 2 DG C "O5'" 1 ATOM 231 C "C5'" . DG C 1 2 ? -4.326 17.810 11.931 1.00 41.85 ? 2 DG C "C5'" 1 ATOM 232 C "C4'" . DG C 1 2 ? -4.393 17.147 10.557 1.00 38.88 ? 2 DG C "C4'" 1 ATOM 233 O "O4'" . DG C 1 2 ? -3.227 16.301 10.336 1.00 37.31 ? 2 DG C "O4'" 1 ATOM 234 C "C3'" . DG C 1 2 ? -5.609 16.263 10.322 1.00 38.49 ? 2 DG C "C3'" 1 ATOM 235 O "O3'" . DG C 1 2 ? -6.138 16.629 9.052 1.00 40.76 ? 2 DG C "O3'" 1 ATOM 236 C "C2'" . DG C 1 2 ? -5.035 14.835 10.390 1.00 36.78 ? 2 DG C "C2'" 1 ATOM 237 C "C1'" . DG C 1 2 ? -3.580 14.980 9.931 1.00 34.31 ? 2 DG C "C1'" 1 ATOM 238 N N9 . DG C 1 2 ? -2.538 14.114 10.513 1.00 30.46 ? 2 DG C N9 1 ATOM 239 C C8 . DG C 1 2 ? -2.284 14.014 11.857 1.00 28.72 ? 2 DG C C8 1 ATOM 240 N N7 . DG C 1 2 ? -1.300 13.213 12.150 1.00 27.24 ? 2 DG C N7 1 ATOM 241 C C5 . DG C 1 2 ? -0.833 12.753 10.939 1.00 25.59 ? 2 DG C C5 1 ATOM 242 C C6 . DG C 1 2 ? 0.247 11.870 10.676 1.00 26.06 ? 2 DG C C6 1 ATOM 243 O O6 . DG C 1 2 ? 1.005 11.318 11.502 1.00 25.24 ? 2 DG C O6 1 ATOM 244 N N1 . DG C 1 2 ? 0.432 11.639 9.310 1.00 24.51 ? 2 DG C N1 1 ATOM 245 C C2 . DG C 1 2 ? -0.355 12.212 8.346 1.00 25.88 ? 2 DG C C2 1 ATOM 246 N N2 . DG C 1 2 ? -0.037 11.871 7.088 1.00 25.75 ? 2 DG C N2 1 ATOM 247 N N3 . DG C 1 2 ? -1.372 13.054 8.585 1.00 26.36 ? 2 DG C N3 1 ATOM 248 C C4 . DG C 1 2 ? -1.569 13.298 9.908 1.00 27.98 ? 2 DG C C4 1 ATOM 249 P P . DT C 1 3 ? -7.659 16.422 8.549 1.00 43.06 ? 3 DT C P 1 ATOM 250 O OP1 . DT C 1 3 ? -8.102 17.740 8.028 1.00 43.42 ? 3 DT C OP1 1 ATOM 251 O OP2 . DT C 1 3 ? -8.454 15.714 9.583 1.00 42.42 ? 3 DT C OP2 1 ATOM 252 O "O5'" . DT C 1 3 ? -7.507 15.427 7.294 1.00 40.41 ? 3 DT C "O5'" 1 ATOM 253 C "C5'" . DT C 1 3 ? -6.400 15.516 6.404 1.00 37.71 ? 3 DT C "C5'" 1 ATOM 254 C "C4'" . DT C 1 3 ? -5.977 14.145 5.907 1.00 37.08 ? 3 DT C "C4'" 1 ATOM 255 O "O4'" . DT C 1 3 ? -5.074 13.506 6.858 1.00 38.40 ? 3 DT C "O4'" 1 ATOM 256 C "C3'" . DT C 1 3 ? -7.089 13.113 5.663 1.00 35.98 ? 3 DT C "C3'" 1 ATOM 257 O "O3'" . DT C 1 3 ? -7.013 12.635 4.288 1.00 33.54 ? 3 DT C "O3'" 1 ATOM 258 C "C2'" . DT C 1 3 ? -6.839 12.011 6.712 1.00 35.09 ? 3 DT C "C2'" 1 ATOM 259 C "C1'" . DT C 1 3 ? -5.320 12.100 6.829 1.00 35.52 ? 3 DT C "C1'" 1 ATOM 260 N N1 . DT C 1 3 ? -4.613 11.432 7.992 1.00 33.80 ? 3 DT C N1 1 ATOM 261 C C2 . DT C 1 3 ? -3.564 10.605 7.681 1.00 33.69 ? 3 DT C C2 1 ATOM 262 O O2 . DT C 1 3 ? -3.219 10.396 6.541 1.00 35.09 ? 3 DT C O2 1 ATOM 263 N N3 . DT C 1 3 ? -2.923 10.019 8.738 1.00 32.58 ? 3 DT C N3 1 ATOM 264 C C4 . DT C 1 3 ? -3.230 10.189 10.070 1.00 32.32 ? 3 DT C C4 1 ATOM 265 O O4 . DT C 1 3 ? -2.585 9.620 10.942 1.00 31.89 ? 3 DT C O4 1 ATOM 266 C C5 . DT C 1 3 ? -4.339 11.068 10.357 1.00 32.71 ? 3 DT C C5 1 ATOM 267 C C7 . DT C 1 3 ? -4.749 11.311 11.789 1.00 32.56 ? 3 DT C C7 1 ATOM 268 C C6 . DT C 1 3 ? -4.974 11.642 9.314 1.00 33.27 ? 3 DT C C6 1 ATOM 269 P P . DA C 1 4 ? -8.175 11.721 3.659 1.00 31.08 ? 4 DA C P 1 ATOM 270 O OP1 . DA C 1 4 ? -8.589 12.365 2.390 1.00 33.18 ? 4 DA C OP1 1 ATOM 271 O OP2 . DA C 1 4 ? -9.229 11.394 4.657 1.00 29.96 ? 4 DA C OP2 1 ATOM 272 O "O5'" . DA C 1 4 ? -7.346 10.399 3.379 1.00 27.79 ? 4 DA C "O5'" 1 ATOM 273 C "C5'" . DA C 1 4 ? -6.048 10.493 2.878 1.00 26.12 ? 4 DA C "C5'" 1 ATOM 274 C "C4'" . DA C 1 4 ? -5.509 9.086 2.802 1.00 26.92 ? 4 DA C "C4'" 1 ATOM 275 O "O4'" . DA C 1 4 ? -4.853 8.738 4.055 1.00 28.06 ? 4 DA C "O4'" 1 ATOM 276 C "C3'" . DA C 1 4 ? -6.570 8.013 2.567 1.00 27.06 ? 4 DA C "C3'" 1 ATOM 277 O "O3'" . DA C 1 4 ? -6.048 7.123 1.606 1.00 25.98 ? 4 DA C "O3'" 1 ATOM 278 C "C2'" . DA C 1 4 ? -6.745 7.333 3.932 1.00 27.19 ? 4 DA C "C2'" 1 ATOM 279 C "C1'" . DA C 1 4 ? -5.351 7.506 4.549 1.00 27.54 ? 4 DA C "C1'" 1 ATOM 280 N N9 . DA C 1 4 ? -5.330 7.551 6.014 1.00 26.86 ? 4 DA C N9 1 ATOM 281 C C8 . DA C 1 4 ? -6.204 8.202 6.850 1.00 26.49 ? 4 DA C C8 1 ATOM 282 N N7 . DA C 1 4 ? -5.926 8.051 8.126 1.00 26.32 ? 4 DA C N7 1 ATOM 283 C C5 . DA C 1 4 ? -4.784 7.253 8.122 1.00 24.88 ? 4 DA C C5 1 ATOM 284 C C6 . DA C 1 4 ? -3.986 6.729 9.162 1.00 24.36 ? 4 DA C C6 1 ATOM 285 N N6 . DA C 1 4 ? -4.225 6.936 10.471 1.00 23.70 ? 4 DA C N6 1 ATOM 286 N N1 . DA C 1 4 ? -2.927 5.968 8.808 1.00 25.42 ? 4 DA C N1 1 ATOM 287 C C2 . DA C 1 4 ? -2.676 5.735 7.499 1.00 26.67 ? 4 DA C C2 1 ATOM 288 N N3 . DA C 1 4 ? -3.360 6.177 6.437 1.00 26.47 ? 4 DA C N3 1 ATOM 289 C C4 . DA C 1 4 ? -4.408 6.936 6.828 1.00 25.51 ? 4 DA C C4 1 ATOM 290 P P . DC C 1 5 ? -6.938 5.935 1.033 1.00 26.55 ? 5 DC C P 1 ATOM 291 O OP1 . DC C 1 5 ? -6.262 5.603 -0.250 1.00 28.48 ? 5 DC C OP1 1 ATOM 292 O OP2 . DC C 1 5 ? -8.392 6.267 1.169 1.00 21.96 ? 5 DC C OP2 1 ATOM 293 O "O5'" . DC C 1 5 ? -6.647 4.700 1.988 1.00 26.06 ? 5 DC C "O5'" 1 ATOM 294 C "C5'" . DC C 1 5 ? -5.383 4.055 1.972 1.00 26.58 ? 5 DC C "C5'" 1 ATOM 295 C "C4'" . DC C 1 5 ? -5.367 3.067 3.129 1.00 26.07 ? 5 DC C "C4'" 1 ATOM 296 O "O4'" . DC C 1 5 ? -5.367 3.800 4.397 1.00 25.04 ? 5 DC C "O4'" 1 ATOM 297 C "C3'" . DC C 1 5 ? -6.587 2.147 3.155 1.00 24.96 ? 5 DC C "C3'" 1 ATOM 298 O "O3'" . DC C 1 5 ? -6.151 0.817 2.964 1.00 25.60 ? 5 DC C "O3'" 1 ATOM 299 C "C2'" . DC C 1 5 ? -7.189 2.359 4.545 1.00 24.29 ? 5 DC C "C2'" 1 ATOM 300 C "C1'" . DC C 1 5 ? -6.030 2.990 5.336 1.00 22.79 ? 5 DC C "C1'" 1 ATOM 301 N N1 . DC C 1 5 ? -6.428 3.763 6.600 1.00 17.85 ? 5 DC C N1 1 ATOM 302 C C2 . DC C 1 5 ? -5.715 3.559 7.782 1.00 15.71 ? 5 DC C C2 1 ATOM 303 O O2 . DC C 1 5 ? -4.765 2.758 7.760 1.00 13.33 ? 5 DC C O2 1 ATOM 304 N N3 . DC C 1 5 ? -6.092 4.248 8.904 1.00 14.75 ? 5 DC C N3 1 ATOM 305 C C4 . DC C 1 5 ? -7.133 5.088 8.861 1.00 16.16 ? 5 DC C C4 1 ATOM 306 N N4 . DC C 1 5 ? -7.489 5.740 9.957 1.00 15.02 ? 5 DC C N4 1 ATOM 307 C C5 . DC C 1 5 ? -7.871 5.331 7.658 1.00 17.44 ? 5 DC C C5 1 ATOM 308 C C6 . DC C 1 5 ? -7.480 4.641 6.576 1.00 18.10 ? 5 DC C C6 1 ATOM 309 P P . DG C 1 6 ? -7.239 -0.351 2.899 1.00 28.94 ? 6 DG C P 1 ATOM 310 O OP1 . DG C 1 6 ? -6.673 -1.362 1.969 1.00 28.63 ? 6 DG C OP1 1 ATOM 311 O OP2 . DG C 1 6 ? -8.574 0.275 2.712 1.00 26.22 ? 6 DG C OP2 1 ATOM 312 O "O5'" . DG C 1 6 ? -7.260 -0.979 4.398 1.00 28.98 ? 6 DG C "O5'" 1 ATOM 313 C "C5'" . DG C 1 6 ? -6.359 -2.021 4.760 1.00 28.62 ? 6 DG C "C5'" 1 ATOM 314 C "C4'" . DG C 1 6 ? -6.980 -3.004 5.741 1.00 29.93 ? 6 DG C "C4'" 1 ATOM 315 O "O4'" . DG C 1 6 ? -7.550 -2.284 6.865 1.00 29.29 ? 6 DG C "O4'" 1 ATOM 316 C "C3'" . DG C 1 6 ? -8.094 -3.896 5.196 1.00 30.30 ? 6 DG C "C3'" 1 ATOM 317 O "O3'" . DG C 1 6 ? -7.526 -5.122 4.748 1.00 31.85 ? 6 DG C "O3'" 1 ATOM 318 C "C2'" . DG C 1 6 ? -8.990 -4.141 6.413 1.00 29.08 ? 6 DG C "C2'" 1 ATOM 319 C "C1'" . DG C 1 6 ? -8.706 -2.943 7.327 1.00 27.93 ? 6 DG C "C1'" 1 ATOM 320 N N9 . DG C 1 6 ? -9.802 -1.983 7.401 1.00 25.59 ? 6 DG C N9 1 ATOM 321 C C8 . DG C 1 6 ? -10.627 -1.582 6.381 1.00 26.16 ? 6 DG C C8 1 ATOM 322 N N7 . DG C 1 6 ? -11.550 -0.734 6.742 1.00 25.40 ? 6 DG C N7 1 ATOM 323 C C5 . DG C 1 6 ? -11.329 -0.569 8.100 1.00 24.46 ? 6 DG C C5 1 ATOM 324 C C6 . DG C 1 6 ? -12.017 0.244 9.031 1.00 24.94 ? 6 DG C C6 1 ATOM 325 O O6 . DG C 1 6 ? -12.987 0.994 8.827 1.00 25.18 ? 6 DG C O6 1 ATOM 326 N N1 . DG C 1 6 ? -11.482 0.132 10.318 1.00 25.17 ? 6 DG C N1 1 ATOM 327 C C2 . DG C 1 6 ? -10.416 -0.677 10.651 1.00 26.01 ? 6 DG C C2 1 ATOM 328 N N2 . DG C 1 6 ? -10.055 -0.647 11.945 1.00 26.65 ? 6 DG C N2 1 ATOM 329 N N3 . DG C 1 6 ? -9.747 -1.441 9.779 1.00 24.89 ? 6 DG C N3 1 ATOM 330 C C4 . DG C 1 6 ? -10.259 -1.334 8.523 1.00 25.08 ? 6 DG C C4 1 ATOM 331 O "O5'" . DC D 1 1 ? 1.554 2.560 20.412 1.00 57.30 ? 7 DC D "O5'" 1 ATOM 332 C "C5'" . DC D 1 1 ? 0.657 3.645 20.621 1.00 56.91 ? 7 DC D "C5'" 1 ATOM 333 C "C4'" . DC D 1 1 ? -0.449 3.171 21.537 1.00 56.79 ? 7 DC D "C4'" 1 ATOM 334 O "O4'" . DC D 1 1 ? 0.038 3.163 22.911 1.00 57.81 ? 7 DC D "O4'" 1 ATOM 335 C "C3'" . DC D 1 1 ? -1.746 3.981 21.487 1.00 55.86 ? 7 DC D "C3'" 1 ATOM 336 O "O3'" . DC D 1 1 ? -2.859 3.111 21.139 1.00 52.80 ? 7 DC D "O3'" 1 ATOM 337 C "C2'" . DC D 1 1 ? -1.889 4.559 22.903 1.00 57.40 ? 7 DC D "C2'" 1 ATOM 338 C "C1'" . DC D 1 1 ? -0.959 3.700 23.778 1.00 58.93 ? 7 DC D "C1'" 1 ATOM 339 N N1 . DC D 1 1 ? -0.240 4.400 24.943 1.00 59.63 ? 7 DC D N1 1 ATOM 340 C C2 . DC D 1 1 ? 0.491 3.619 25.868 1.00 59.30 ? 7 DC D C2 1 ATOM 341 O O2 . DC D 1 1 ? 0.519 2.384 25.732 1.00 58.85 ? 7 DC D O2 1 ATOM 342 N N3 . DC D 1 1 ? 1.148 4.248 26.891 1.00 58.58 ? 7 DC D N3 1 ATOM 343 C C4 . DC D 1 1 ? 1.099 5.582 27.014 1.00 58.53 ? 7 DC D C4 1 ATOM 344 N N4 . DC D 1 1 ? 1.756 6.147 28.034 1.00 57.53 ? 7 DC D N4 1 ATOM 345 C C5 . DC D 1 1 ? 0.373 6.399 26.084 1.00 59.20 ? 7 DC D C5 1 ATOM 346 C C6 . DC D 1 1 ? -0.270 5.774 25.081 1.00 59.66 ? 7 DC D C6 1 ATOM 347 P P . DG D 1 2 ? -3.623 3.180 19.725 1.00 49.10 ? 8 DG D P 1 ATOM 348 O OP1 . DG D 1 2 ? -4.028 4.601 19.559 1.00 48.62 ? 8 DG D OP1 1 ATOM 349 O OP2 . DG D 1 2 ? -4.687 2.146 19.667 1.00 47.55 ? 8 DG D OP2 1 ATOM 350 O "O5'" . DG D 1 2 ? -2.473 2.768 18.685 1.00 45.08 ? 8 DG D "O5'" 1 ATOM 351 C "C5'" . DG D 1 2 ? -1.853 1.502 18.791 1.00 41.49 ? 8 DG D "C5'" 1 ATOM 352 C "C4'" . DG D 1 2 ? -1.567 0.816 17.468 1.00 38.84 ? 8 DG D "C4'" 1 ATOM 353 O "O4'" . DG D 1 2 ? -2.781 0.658 16.694 1.00 37.65 ? 8 DG D "O4'" 1 ATOM 354 C "C3'" . DG D 1 2 ? -0.618 1.553 16.547 1.00 39.07 ? 8 DG D "C3'" 1 ATOM 355 O "O3'" . DG D 1 2 ? 0.721 1.185 16.867 1.00 40.75 ? 8 DG D "O3'" 1 ATOM 356 C "C2'" . DG D 1 2 ? -1.037 1.057 15.154 1.00 37.22 ? 8 DG D "C2'" 1 ATOM 357 C "C1'" . DG D 1 2 ? -2.539 0.887 15.311 1.00 33.80 ? 8 DG D "C1'" 1 ATOM 358 N N9 . DG D 1 2 ? -3.432 1.967 14.860 1.00 30.37 ? 8 DG D N9 1 ATOM 359 C C8 . DG D 1 2 ? -4.220 2.770 15.664 1.00 30.20 ? 8 DG D C8 1 ATOM 360 N N7 . DG D 1 2 ? -4.964 3.643 15.027 1.00 27.69 ? 8 DG D N7 1 ATOM 361 C C5 . DG D 1 2 ? -4.657 3.391 13.690 1.00 27.20 ? 8 DG D C5 1 ATOM 362 C C6 . DG D 1 2 ? -5.148 4.021 12.517 1.00 25.09 ? 8 DG D C6 1 ATOM 363 O O6 . DG D 1 2 ? -5.965 4.947 12.440 1.00 24.32 ? 8 DG D O6 1 ATOM 364 N N1 . DG D 1 2 ? -4.610 3.482 11.358 1.00 23.82 ? 8 DG D N1 1 ATOM 365 C C2 . DG D 1 2 ? -3.697 2.471 11.328 1.00 25.09 ? 8 DG D C2 1 ATOM 366 N N2 . DG D 1 2 ? -3.285 2.090 10.113 1.00 23.88 ? 8 DG D N2 1 ATOM 367 N N3 . DG D 1 2 ? -3.220 1.872 12.416 1.00 27.37 ? 8 DG D N3 1 ATOM 368 C C4 . DG D 1 2 ? -3.733 2.370 13.569 1.00 28.12 ? 8 DG D C4 1 ATOM 369 P P . DT D 1 3 ? 1.919 2.231 16.635 1.00 42.52 ? 9 DT D P 1 ATOM 370 O OP1 . DT D 1 3 ? 3.162 1.735 17.300 1.00 42.06 ? 9 DT D OP1 1 ATOM 371 O OP2 . DT D 1 3 ? 1.384 3.581 17.002 1.00 40.75 ? 9 DT D OP2 1 ATOM 372 O "O5'" . DT D 1 3 ? 2.126 2.120 15.044 1.00 39.67 ? 9 DT D "O5'" 1 ATOM 373 C "C5'" . DT D 1 3 ? 2.491 0.883 14.450 1.00 38.26 ? 9 DT D "C5'" 1 ATOM 374 C "C4'" . DT D 1 3 ? 2.324 0.992 12.936 1.00 37.99 ? 9 DT D "C4'" 1 ATOM 375 O "O4'" . DT D 1 3 ? 1.046 1.621 12.652 1.00 36.31 ? 9 DT D "O4'" 1 ATOM 376 C "C3'" . DT D 1 3 ? 3.374 1.836 12.212 1.00 37.39 ? 9 DT D "C3'" 1 ATOM 377 O "O3'" . DT D 1 3 ? 3.873 1.172 11.028 1.00 37.87 ? 9 DT D "O3'" 1 ATOM 378 C "C2'" . DT D 1 3 ? 2.639 3.155 11.945 1.00 35.80 ? 9 DT D "C2'" 1 ATOM 379 C "C1'" . DT D 1 3 ? 1.197 2.702 11.765 1.00 33.03 ? 9 DT D "C1'" 1 ATOM 380 N N1 . DT D 1 3 ? 0.093 3.693 12.068 1.00 30.16 ? 9 DT D N1 1 ATOM 381 C C2 . DT D 1 3 ? -0.611 4.245 11.013 1.00 28.83 ? 9 DT D C2 1 ATOM 382 O O2 . DT D 1 3 ? -0.391 4.011 9.841 1.00 28.51 ? 9 DT D O2 1 ATOM 383 N N3 . DT D 1 3 ? -1.600 5.111 11.362 1.00 28.25 ? 9 DT D N3 1 ATOM 384 C C4 . DT D 1 3 ? -1.969 5.493 12.637 1.00 30.13 ? 9 DT D C4 1 ATOM 385 O O4 . DT D 1 3 ? -2.890 6.298 12.838 1.00 30.24 ? 9 DT D O4 1 ATOM 386 C C5 . DT D 1 3 ? -1.204 4.878 13.706 1.00 30.26 ? 9 DT D C5 1 ATOM 387 C C7 . DT D 1 3 ? -1.533 5.223 15.136 1.00 31.67 ? 9 DT D C7 1 ATOM 388 C C6 . DT D 1 3 ? -0.225 4.015 13.379 1.00 29.51 ? 9 DT D C6 1 ATOM 389 P P . DA D 1 4 ? 5.015 1.871 10.126 1.00 39.47 ? 10 DA D P 1 ATOM 390 O OP1 . DA D 1 4 ? 5.775 0.824 9.370 1.00 35.61 ? 10 DA D OP1 1 ATOM 391 O OP2 . DA D 1 4 ? 5.689 2.924 10.946 1.00 35.90 ? 10 DA D OP2 1 ATOM 392 O "O5'" . DA D 1 4 ? 4.103 2.673 9.067 1.00 37.93 ? 10 DA D "O5'" 1 ATOM 393 C "C5'" . DA D 1 4 ? 3.742 2.058 7.812 1.00 34.79 ? 10 DA D "C5'" 1 ATOM 394 C "C4'" . DA D 1 4 ? 3.485 3.099 6.742 1.00 30.22 ? 10 DA D "C4'" 1 ATOM 395 O "O4'" . DA D 1 4 ? 2.447 3.998 7.183 1.00 28.71 ? 10 DA D "O4'" 1 ATOM 396 C "C3'" . DA D 1 4 ? 4.696 3.973 6.480 1.00 29.97 ? 10 DA D "C3'" 1 ATOM 397 O "O3'" . DA D 1 4 ? 4.832 4.201 5.090 1.00 30.15 ? 10 DA D "O3'" 1 ATOM 398 C "C2'" . DA D 1 4 ? 4.418 5.250 7.266 1.00 28.44 ? 10 DA D "C2'" 1 ATOM 399 C "C1'" . DA D 1 4 ? 2.905 5.335 7.192 1.00 27.20 ? 10 DA D "C1'" 1 ATOM 400 N N9 . DA D 1 4 ? 2.282 5.948 8.351 1.00 25.85 ? 10 DA D N9 1 ATOM 401 C C8 . DA D 1 4 ? 2.614 5.754 9.665 1.00 24.59 ? 10 DA D C8 1 ATOM 402 N N7 . DA D 1 4 ? 1.858 6.422 10.511 1.00 24.05 ? 10 DA D N7 1 ATOM 403 C C5 . DA D 1 4 ? 0.966 7.092 9.705 1.00 22.86 ? 10 DA D C5 1 ATOM 404 C C6 . DA D 1 4 ? -0.089 7.964 10.004 1.00 23.01 ? 10 DA D C6 1 ATOM 405 N N6 . DA D 1 4 ? -0.415 8.310 11.254 1.00 21.67 ? 10 DA D N6 1 ATOM 406 N N1 . DA D 1 4 ? -0.799 8.468 8.962 1.00 23.81 ? 10 DA D N1 1 ATOM 407 C C2 . DA D 1 4 ? -0.447 8.108 7.713 1.00 24.83 ? 10 DA D C2 1 ATOM 408 N N3 . DA D 1 4 ? 0.534 7.289 7.311 1.00 23.95 ? 10 DA D N3 1 ATOM 409 C C4 . DA D 1 4 ? 1.210 6.814 8.366 1.00 24.63 ? 10 DA D C4 1 ATOM 410 P P . DC D 1 5 ? 6.194 4.802 4.484 1.00 31.68 ? 11 DC D P 1 ATOM 411 O OP1 . DC D 1 5 ? 6.420 4.230 3.136 1.00 31.09 ? 11 DC D OP1 1 ATOM 412 O OP2 . DC D 1 5 ? 7.292 4.767 5.496 1.00 29.61 ? 11 DC D OP2 1 ATOM 413 O "O5'" . DC D 1 5 ? 5.682 6.285 4.288 1.00 29.34 ? 11 DC D "O5'" 1 ATOM 414 C "C5'" . DC D 1 5 ? 4.523 6.466 3.508 1.00 29.14 ? 11 DC D "C5'" 1 ATOM 415 C "C4'" . DC D 1 5 ? 4.110 7.909 3.666 1.00 28.96 ? 11 DC D "C4'" 1 ATOM 416 O "O4'" . DC D 1 5 ? 3.461 8.066 4.959 1.00 28.88 ? 11 DC D "O4'" 1 ATOM 417 C "C3'" . DC D 1 5 ? 5.281 8.903 3.646 1.00 28.09 ? 11 DC D "C3'" 1 ATOM 418 O "O3'" . DC D 1 5 ? 4.907 10.091 2.899 1.00 27.80 ? 11 DC D "O3'" 1 ATOM 419 C "C2'" . DC D 1 5 ? 5.466 9.179 5.136 1.00 26.87 ? 11 DC D "C2'" 1 ATOM 420 C "C1'" . DC D 1 5 ? 3.989 9.247 5.525 1.00 27.51 ? 11 DC D "C1'" 1 ATOM 421 N N1 . DC D 1 5 ? 3.690 9.376 6.985 1.00 26.20 ? 11 DC D N1 1 ATOM 422 C C2 . DC D 1 5 ? 2.606 10.150 7.391 1.00 26.26 ? 11 DC D C2 1 ATOM 423 O O2 . DC D 1 5 ? 1.915 10.698 6.545 1.00 26.04 ? 11 DC D O2 1 ATOM 424 N N3 . DC D 1 5 ? 2.338 10.295 8.711 1.00 26.70 ? 11 DC D N3 1 ATOM 425 C C4 . DC D 1 5 ? 3.127 9.680 9.606 1.00 27.62 ? 11 DC D C4 1 ATOM 426 N N4 . DC D 1 5 ? 2.845 9.827 10.910 1.00 29.22 ? 11 DC D N4 1 ATOM 427 C C5 . DC D 1 5 ? 4.238 8.879 9.218 1.00 26.41 ? 11 DC D C5 1 ATOM 428 C C6 . DC D 1 5 ? 4.484 8.764 7.911 1.00 26.34 ? 11 DC D C6 1 ATOM 429 P P . DG D 1 6 ? 5.931 11.065 2.133 1.00 25.74 ? 12 DG D P 1 ATOM 430 O OP1 . DG D 1 6 ? 5.053 11.732 1.148 1.00 27.48 ? 12 DG D OP1 1 ATOM 431 O OP2 . DG D 1 6 ? 7.119 10.267 1.763 1.00 24.59 ? 12 DG D OP2 1 ATOM 432 O "O5'" . DG D 1 6 ? 6.371 12.223 3.125 1.00 25.40 ? 12 DG D "O5'" 1 ATOM 433 C "C5'" . DG D 1 6 ? 5.318 13.045 3.658 1.00 25.52 ? 12 DG D "C5'" 1 ATOM 434 C "C4'" . DG D 1 6 ? 5.854 14.232 4.426 1.00 25.20 ? 12 DG D "C4'" 1 ATOM 435 O "O4'" . DG D 1 6 ? 6.600 13.763 5.563 1.00 24.67 ? 12 DG D "O4'" 1 ATOM 436 C "C3'" . DG D 1 6 ? 6.799 15.111 3.625 1.00 25.98 ? 12 DG D "C3'" 1 ATOM 437 O "O3'" . DG D 1 6 ? 6.106 16.318 3.348 1.00 29.09 ? 12 DG D "O3'" 1 ATOM 438 C "C2'" . DG D 1 6 ? 7.993 15.340 4.544 1.00 26.14 ? 12 DG D "C2'" 1 ATOM 439 C "C1'" . DG D 1 6 ? 7.952 14.110 5.434 1.00 26.09 ? 12 DG D "C1'" 1 ATOM 440 N N9 . DG D 1 6 ? 8.590 12.914 4.929 1.00 28.91 ? 12 DG D N9 1 ATOM 441 C C8 . DG D 1 6 ? 9.339 12.740 3.788 1.00 31.14 ? 12 DG D C8 1 ATOM 442 N N7 . DG D 1 6 ? 9.756 11.512 3.630 1.00 32.16 ? 12 DG D N7 1 ATOM 443 C C5 . DG D 1 6 ? 9.246 10.834 4.726 1.00 31.20 ? 12 DG D C5 1 ATOM 444 C C6 . DG D 1 6 ? 9.369 9.484 5.111 1.00 31.80 ? 12 DG D C6 1 ATOM 445 O O6 . DG D 1 6 ? 9.972 8.598 4.524 1.00 31.51 ? 12 DG D O6 1 ATOM 446 N N1 . DG D 1 6 ? 8.712 9.180 6.301 1.00 33.48 ? 12 DG D N1 1 ATOM 447 C C2 . DG D 1 6 ? 8.011 10.113 7.040 1.00 35.20 ? 12 DG D C2 1 ATOM 448 N N2 . DG D 1 6 ? 7.421 9.689 8.173 1.00 37.39 ? 12 DG D N2 1 ATOM 449 N N3 . DG D 1 6 ? 7.881 11.393 6.690 1.00 34.33 ? 12 DG D N3 1 ATOM 450 C C4 . DG D 1 6 ? 8.524 11.682 5.526 1.00 31.75 ? 12 DG D C4 1 HETATM 451 N N . SAU E 2 . ? -8.276 1.942 11.914 1.00 35.94 ? 7 SAU C N 1 HETATM 452 C C1 . SAU E 2 . ? -12.204 5.411 7.513 1.00 46.07 ? 7 SAU C C1 1 HETATM 453 O O1 . SAU E 2 . ? -11.805 5.037 8.877 1.00 45.56 ? 7 SAU C O1 1 HETATM 454 C C2 . SAU E 2 . ? -10.700 3.682 7.411 1.00 43.18 ? 7 SAU C C2 1 HETATM 455 O O2 . SAU E 2 . ? -11.544 4.444 6.639 1.00 45.09 ? 7 SAU C O2 1 HETATM 456 C C3 . SAU E 2 . ? -10.858 4.048 8.820 1.00 43.07 ? 7 SAU C C3 1 HETATM 457 O O3 . SAU E 2 . ? -4.050 -2.126 13.465 1.00 37.73 ? 7 SAU C O3 1 HETATM 458 C C4 . SAU E 2 . ? -9.790 2.715 7.026 1.00 40.79 ? 7 SAU C C4 1 HETATM 459 O O4 . SAU E 2 . ? -5.468 -0.580 14.440 1.00 38.93 ? 7 SAU C O4 1 HETATM 460 C C5 . SAU E 2 . ? -9.029 2.112 8.031 1.00 38.86 ? 7 SAU C C5 1 HETATM 461 C C6 . SAU E 2 . ? -9.181 2.468 9.490 1.00 37.87 ? 7 SAU C C6 1 HETATM 462 C C7 . SAU E 2 . ? -10.112 3.458 9.843 1.00 40.82 ? 7 SAU C C7 1 HETATM 463 C C8 . SAU E 2 . ? -8.121 1.146 7.631 1.00 38.25 ? 7 SAU C C8 1 HETATM 464 C C9 . SAU E 2 . ? -7.310 0.475 8.538 1.00 37.79 ? 7 SAU C C9 1 HETATM 465 C C10 . SAU E 2 . ? -8.299 1.744 10.487 1.00 36.50 ? 7 SAU C C10 1 HETATM 466 C C12 . SAU E 2 . ? -7.457 1.232 12.719 1.00 35.63 ? 7 SAU C C12 1 HETATM 467 C C13 . SAU E 2 . ? -6.570 0.266 12.239 1.00 36.23 ? 7 SAU C C13 1 HETATM 468 C C14 . SAU E 2 . ? -6.471 -0.029 10.785 1.00 35.72 ? 7 SAU C C14 1 HETATM 469 C C15 . SAU E 2 . ? -7.367 0.728 9.899 1.00 36.00 ? 7 SAU C C15 1 HETATM 470 C C18 . SAU E 2 . ? -5.586 -0.988 10.271 1.00 35.64 ? 7 SAU C C18 1 HETATM 471 C C19 . SAU E 2 . ? -4.733 -1.737 11.090 1.00 36.83 ? 7 SAU C C19 1 HETATM 472 C C20 . SAU E 2 . ? -4.760 -1.516 12.468 1.00 37.22 ? 7 SAU C C20 1 HETATM 473 C C21 . SAU E 2 . ? -5.654 -0.537 13.087 1.00 37.20 ? 7 SAU C C21 1 HETATM 474 C C23 . SAU E 2 . ? -4.662 -1.753 14.730 1.00 37.95 ? 7 SAU C C23 1 HETATM 475 C C25 . SAU E 2 . ? -9.147 2.908 12.585 1.00 35.37 ? 7 SAU C C25 1 HETATM 476 CA CA . CA F 3 . ? 8.491 9.207 1.027 1.00 49.70 ? 1 CA D CA 1 HETATM 477 O O . HOH G 4 . ? 1.760 13.627 14.471 1.00 32.86 ? 7 HOH A O 1 HETATM 478 O O . HOH G 4 . ? 2.785 10.935 15.989 1.00 29.49 ? 8 HOH A O 1 HETATM 479 O O . HOH H 4 . ? 6.684 17.831 15.658 1.00 23.05 ? 1 HOH B O 1 HETATM 480 O O . HOH H 4 . ? 0.639 6.289 4.692 1.00 15.87 ? 3 HOH B O 1 HETATM 481 O O . HOH I 4 . ? 11.877 4.863 3.472 1.00 19.32 ? 4 HOH D O 1 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC DC A . n A 1 2 DG 2 2 2 DG DG A . n A 1 3 DT 3 3 3 DT DT A . n A 1 4 DA 4 4 4 DA DA A . n A 1 5 DC 5 5 5 DC DC A . n A 1 6 DG 6 6 6 DG DG A . n B 1 1 DC 1 7 7 DC DC B . n B 1 2 DG 2 8 8 DG DG B . n B 1 3 DT 3 9 9 DT DT B . n B 1 4 DA 4 10 10 DA DA B . n B 1 5 DC 5 11 11 DC DC B . n B 1 6 DG 6 12 12 DG DG B . n C 1 1 DC 1 1 1 DC DC C . n C 1 2 DG 2 2 2 DG DG C . n C 1 3 DT 3 3 3 DT DT C . n C 1 4 DA 4 4 4 DA DA C . n C 1 5 DC 5 5 5 DC DC C . n C 1 6 DG 6 6 6 DG DG C . n D 1 1 DC 1 7 7 DC DC D . n D 1 2 DG 2 8 8 DG DG D . n D 1 3 DT 3 9 9 DT DT D . n D 1 4 DA 4 10 10 DA DA D . n D 1 5 DC 5 11 11 DC DC D . n D 1 6 DG 6 12 12 DG DG D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 SAU 1 7 1 SAU SAU C . F 3 CA 1 1 1 CA CA D . G 4 HOH 1 7 2 HOH HOH A . G 4 HOH 2 8 5 HOH HOH A . H 4 HOH 1 1 1 HOH HOH B . H 4 HOH 2 3 3 HOH HOH B . I 4 HOH 1 4 4 HOH HOH D . # _struct_site_keywords.site_id 1 _struct_site_keywords.text 'MINOR GROOVE BINDER' # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 author_and_software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,G,H 2 1 C,D,E,F,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 360 ? 1 MORE -3 ? 1 'SSA (A^2)' 2680 ? 2 'ABSA (A^2)' 370 ? 2 MORE -2 ? 2 'SSA (A^2)' 2680 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-05-04 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_conn 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 4 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 5 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 6 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 7 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 8 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 9 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 10 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 11 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 12 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 13 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 14 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 15 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 16 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 17 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_phasing_MR.entry_id 3NX5 _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details ? _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 3.500 _pdbx_phasing_MR.d_res_low_rotation 39.690 _pdbx_phasing_MR.d_res_high_translation 3.500 _pdbx_phasing_MR.d_res_low_translation 39.690 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 2 MOLREP . ? program 'Alexei Vaguine' alexei@ysbl.york.ac.uk phasing http://www.ccp4.ac.uk/dist/html/molrep.html Fortran_77 ? 3 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 XDS . ? ? ? ? 'data reduction' ? ? ? 6 XDS . ? ? ? ? 'data scaling' ? ? ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C3'" A DT 3 ? ? "O3'" A DT 3 ? ? P A DA 4 ? ? 127.29 119.70 7.59 1.20 Y 2 1 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 111.18 108.30 2.88 0.30 N 3 1 "O4'" B DG 8 ? ? "C4'" B DG 8 ? ? "C3'" B DG 8 ? ? 100.78 104.50 -3.72 0.40 N 4 1 N3 C DG 2 ? ? C4 C DG 2 ? ? C5 C DG 2 ? ? 125.40 128.60 -3.20 0.50 N 5 1 "O4'" C DC 5 ? ? "C1'" C DC 5 ? ? N1 C DC 5 ? ? 112.47 108.30 4.17 0.30 N 6 1 "O4'" D DC 11 ? ? "C1'" D DC 11 ? ? N1 D DC 11 ? ? 112.87 108.30 4.57 0.30 N # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A DC 1 ? "O5'" ? A DC 1 "O5'" 2 1 Y 1 A DC 1 ? "C5'" ? A DC 1 "C5'" 3 1 Y 1 A DC 1 ? "C4'" ? A DC 1 "C4'" 4 1 Y 1 A DC 1 ? "O4'" ? A DC 1 "O4'" 5 1 Y 1 A DC 1 ? "C3'" ? A DC 1 "C3'" 6 1 Y 1 A DC 1 ? "C2'" ? A DC 1 "C2'" 7 1 Y 1 A DC 1 ? "C1'" ? A DC 1 "C1'" 8 1 Y 1 A DC 1 ? N1 ? A DC 1 N1 9 1 Y 1 A DC 1 ? C2 ? A DC 1 C2 10 1 Y 1 A DC 1 ? O2 ? A DC 1 O2 11 1 Y 1 A DC 1 ? N3 ? A DC 1 N3 12 1 Y 1 A DC 1 ? C4 ? A DC 1 C4 13 1 Y 1 A DC 1 ? N4 ? A DC 1 N4 14 1 Y 1 A DC 1 ? C5 ? A DC 1 C5 15 1 Y 1 A DC 1 ? C6 ? A DC 1 C6 16 1 Y 1 C DC 1 ? "O5'" ? C DC 1 "O5'" 17 1 Y 1 C DC 1 ? "C5'" ? C DC 1 "C5'" 18 1 Y 1 C DC 1 ? "C4'" ? C DC 1 "C4'" 19 1 Y 1 C DC 1 ? "O4'" ? C DC 1 "O4'" 20 1 Y 1 C DC 1 ? "C3'" ? C DC 1 "C3'" 21 1 Y 1 C DC 1 ? "C2'" ? C DC 1 "C2'" 22 1 Y 1 C DC 1 ? "C1'" ? C DC 1 "C1'" 23 1 Y 1 C DC 1 ? N1 ? C DC 1 N1 24 1 Y 1 C DC 1 ? C2 ? C DC 1 C2 25 1 Y 1 C DC 1 ? O2 ? C DC 1 O2 26 1 Y 1 C DC 1 ? N3 ? C DC 1 N3 27 1 Y 1 C DC 1 ? C4 ? C DC 1 C4 28 1 Y 1 C DC 1 ? N4 ? C DC 1 N4 29 1 Y 1 C DC 1 ? C5 ? C DC 1 C5 30 1 Y 1 C DC 1 ? C6 ? C DC 1 C6 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal CA CA CA N N 1 DA OP3 O N N 2 DA P P N N 3 DA OP1 O N N 4 DA OP2 O N N 5 DA "O5'" O N N 6 DA "C5'" C N N 7 DA "C4'" C N R 8 DA "O4'" O N N 9 DA "C3'" C N S 10 DA "O3'" O N N 11 DA "C2'" C N N 12 DA "C1'" C N R 13 DA N9 N Y N 14 DA C8 C Y N 15 DA N7 N Y N 16 DA C5 C Y N 17 DA C6 C Y N 18 DA N6 N N N 19 DA N1 N Y N 20 DA C2 C Y N 21 DA N3 N Y N 22 DA C4 C Y N 23 DA HOP3 H N N 24 DA HOP2 H N N 25 DA "H5'" H N N 26 DA "H5''" H N N 27 DA "H4'" H N N 28 DA "H3'" H N N 29 DA "HO3'" H N N 30 DA "H2'" H N N 31 DA "H2''" H N N 32 DA "H1'" H N N 33 DA H8 H N N 34 DA H61 H N N 35 DA H62 H N N 36 DA H2 H N N 37 DC OP3 O N N 38 DC P P N N 39 DC OP1 O N N 40 DC OP2 O N N 41 DC "O5'" O N N 42 DC "C5'" C N N 43 DC "C4'" C N R 44 DC "O4'" O N N 45 DC "C3'" C N S 46 DC "O3'" O N N 47 DC "C2'" C N N 48 DC "C1'" C N R 49 DC N1 N N N 50 DC C2 C N N 51 DC O2 O N N 52 DC N3 N N N 53 DC C4 C N N 54 DC N4 N N N 55 DC C5 C N N 56 DC C6 C N N 57 DC HOP3 H N N 58 DC HOP2 H N N 59 DC "H5'" H N N 60 DC "H5''" H N N 61 DC "H4'" H N N 62 DC "H3'" H N N 63 DC "HO3'" H N N 64 DC "H2'" H N N 65 DC "H2''" H N N 66 DC "H1'" H N N 67 DC H41 H N N 68 DC H42 H N N 69 DC H5 H N N 70 DC H6 H N N 71 DG OP3 O N N 72 DG P P N N 73 DG OP1 O N N 74 DG OP2 O N N 75 DG "O5'" O N N 76 DG "C5'" C N N 77 DG "C4'" C N R 78 DG "O4'" O N N 79 DG "C3'" C N S 80 DG "O3'" O N N 81 DG "C2'" C N N 82 DG "C1'" C N R 83 DG N9 N Y N 84 DG C8 C Y N 85 DG N7 N Y N 86 DG C5 C Y N 87 DG C6 C N N 88 DG O6 O N N 89 DG N1 N N N 90 DG C2 C N N 91 DG N2 N N N 92 DG N3 N N N 93 DG C4 C Y N 94 DG HOP3 H N N 95 DG HOP2 H N N 96 DG "H5'" H N N 97 DG "H5''" H N N 98 DG "H4'" H N N 99 DG "H3'" H N N 100 DG "HO3'" H N N 101 DG "H2'" H N N 102 DG "H2''" H N N 103 DG "H1'" H N N 104 DG H8 H N N 105 DG H1 H N N 106 DG H21 H N N 107 DG H22 H N N 108 DT OP3 O N N 109 DT P P N N 110 DT OP1 O N N 111 DT OP2 O N N 112 DT "O5'" O N N 113 DT "C5'" C N N 114 DT "C4'" C N R 115 DT "O4'" O N N 116 DT "C3'" C N S 117 DT "O3'" O N N 118 DT "C2'" C N N 119 DT "C1'" C N R 120 DT N1 N N N 121 DT C2 C N N 122 DT O2 O N N 123 DT N3 N N N 124 DT C4 C N N 125 DT O4 O N N 126 DT C5 C N N 127 DT C7 C N N 128 DT C6 C N N 129 DT HOP3 H N N 130 DT HOP2 H N N 131 DT "H5'" H N N 132 DT "H5''" H N N 133 DT "H4'" H N N 134 DT "H3'" H N N 135 DT "HO3'" H N N 136 DT "H2'" H N N 137 DT "H2''" H N N 138 DT "H1'" H N N 139 DT H3 H N N 140 DT H71 H N N 141 DT H72 H N N 142 DT H73 H N N 143 DT H6 H N N 144 HOH O O N N 145 HOH H1 H N N 146 HOH H2 H N N 147 SAU N N Y N 148 SAU C1 C N N 149 SAU O1 O N N 150 SAU C2 C Y N 151 SAU O2 O N N 152 SAU C3 C Y N 153 SAU O3 O N N 154 SAU C4 C Y N 155 SAU O4 O N N 156 SAU C5 C Y N 157 SAU C6 C Y N 158 SAU C7 C Y N 159 SAU C8 C Y N 160 SAU C9 C Y N 161 SAU C10 C Y N 162 SAU C12 C Y N 163 SAU C13 C Y N 164 SAU C14 C Y N 165 SAU C15 C Y N 166 SAU C18 C Y N 167 SAU C19 C Y N 168 SAU C20 C Y N 169 SAU C21 C Y N 170 SAU C23 C N N 171 SAU C25 C N N 172 SAU H1 H N N 173 SAU H1A H N N 174 SAU H4 H N N 175 SAU H7 H N N 176 SAU H8 H N N 177 SAU H9 H N N 178 SAU H12 H N N 179 SAU H18 H N N 180 SAU H19 H N N 181 SAU H23 H N N 182 SAU H23A H N N 183 SAU H25 H N N 184 SAU H25A H N N 185 SAU H25B H N N 186 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DT OP3 P sing N N 113 DT OP3 HOP3 sing N N 114 DT P OP1 doub N N 115 DT P OP2 sing N N 116 DT P "O5'" sing N N 117 DT OP2 HOP2 sing N N 118 DT "O5'" "C5'" sing N N 119 DT "C5'" "C4'" sing N N 120 DT "C5'" "H5'" sing N N 121 DT "C5'" "H5''" sing N N 122 DT "C4'" "O4'" sing N N 123 DT "C4'" "C3'" sing N N 124 DT "C4'" "H4'" sing N N 125 DT "O4'" "C1'" sing N N 126 DT "C3'" "O3'" sing N N 127 DT "C3'" "C2'" sing N N 128 DT "C3'" "H3'" sing N N 129 DT "O3'" "HO3'" sing N N 130 DT "C2'" "C1'" sing N N 131 DT "C2'" "H2'" sing N N 132 DT "C2'" "H2''" sing N N 133 DT "C1'" N1 sing N N 134 DT "C1'" "H1'" sing N N 135 DT N1 C2 sing N N 136 DT N1 C6 sing N N 137 DT C2 O2 doub N N 138 DT C2 N3 sing N N 139 DT N3 C4 sing N N 140 DT N3 H3 sing N N 141 DT C4 O4 doub N N 142 DT C4 C5 sing N N 143 DT C5 C7 sing N N 144 DT C5 C6 doub N N 145 DT C7 H71 sing N N 146 DT C7 H72 sing N N 147 DT C7 H73 sing N N 148 DT C6 H6 sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 SAU N C10 doub Y N 152 SAU N C12 sing Y N 153 SAU N C25 sing N N 154 SAU C1 O1 sing N N 155 SAU C1 O2 sing N N 156 SAU O1 C3 sing N N 157 SAU C2 O2 sing N N 158 SAU C2 C3 doub Y N 159 SAU C2 C4 sing Y N 160 SAU C3 C7 sing Y N 161 SAU O3 C20 sing N N 162 SAU O3 C23 sing N N 163 SAU C4 C5 doub Y N 164 SAU O4 C21 sing N N 165 SAU O4 C23 sing N N 166 SAU C5 C6 sing Y N 167 SAU C5 C8 sing Y N 168 SAU C6 C7 doub Y N 169 SAU C6 C10 sing Y N 170 SAU C8 C9 doub Y N 171 SAU C9 C15 sing Y N 172 SAU C10 C15 sing Y N 173 SAU C12 C13 doub Y N 174 SAU C13 C14 sing Y N 175 SAU C13 C21 sing Y N 176 SAU C14 C15 doub Y N 177 SAU C14 C18 sing Y N 178 SAU C18 C19 doub Y N 179 SAU C19 C20 sing Y N 180 SAU C20 C21 doub Y N 181 SAU C1 H1 sing N N 182 SAU C1 H1A sing N N 183 SAU C4 H4 sing N N 184 SAU C7 H7 sing N N 185 SAU C8 H8 sing N N 186 SAU C9 H9 sing N N 187 SAU C12 H12 sing N N 188 SAU C18 H18 sing N N 189 SAU C19 H19 sing N N 190 SAU C23 H23 sing N N 191 SAU C23 H23A sing N N 192 SAU C25 H25 sing N N 193 SAU C25 H25A sing N N 194 SAU C25 H25B sing N N 195 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3NX5 'double helix' 3NX5 'b-form double helix' 3NX5 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DG 2 1_555 A DC 5 1_555 -0.387 -0.395 0.137 -14.334 -4.244 -12.816 1 B_DG8:DC5_A B 8 ? A 5 ? 19 1 1 B DT 3 1_555 A DA 4 1_555 -0.794 -0.155 -0.192 4.355 -10.660 0.990 2 B_DT9:DA4_A B 9 ? A 4 ? 20 1 1 B DA 4 1_555 A DT 3 1_555 0.261 -0.271 0.133 -0.625 -2.937 -4.087 3 B_DA10:DT3_A B 10 ? A 3 ? 20 1 1 B DC 5 1_555 A DG 2 1_555 0.210 0.010 -0.050 5.279 1.298 4.665 4 B_DC11:DG2_A B 11 ? A 2 ? 19 1 1 C DG 2 1_555 D DC 5 1_555 -0.141 -0.588 0.008 -4.681 2.996 -1.170 5 C_DG2:DC11_D C 2 ? D 11 ? 19 1 1 C DT 3 1_555 D DA 4 1_555 -0.843 -0.369 0.161 0.276 -5.473 -6.894 6 C_DT3:DA10_D C 3 ? D 10 ? 20 1 1 C DA 4 1_555 D DT 3 1_555 -0.502 -0.162 0.151 4.249 -3.554 -7.581 7 C_DA4:DT9_D C 4 ? D 9 ? 20 1 1 C DC 5 1_555 D DG 2 1_555 0.328 -0.051 -0.020 18.289 -1.770 -0.274 8 C_DC5:DG8_D C 5 ? D 8 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DG 2 1_555 A DC 5 1_555 B DT 3 1_555 A DA 4 1_555 -0.352 -0.536 2.874 4.710 5.293 29.300 -1.957 1.502 2.651 10.275 -9.143 30.126 1 BB_DG8DT9:DA4DC5_AA B 8 ? A 5 ? B 9 ? A 4 ? 1 B DT 3 1_555 A DA 4 1_555 B DA 4 1_555 A DT 3 1_555 -0.504 0.005 3.358 -4.562 0.112 44.700 -0.003 0.233 3.390 0.147 5.980 44.920 2 BB_DT9DA10:DT3DA4_AA B 9 ? A 4 ? B 10 ? A 3 ? 1 B DA 4 1_555 A DT 3 1_555 B DC 5 1_555 A DG 2 1_555 0.663 -0.312 3.386 1.196 1.803 26.426 -1.174 -1.118 3.383 3.935 -2.610 26.513 3 BB_DA10DC11:DG2DT3_AA B 10 ? A 3 ? B 11 ? A 2 ? 1 B DC 5 1_555 A DG 2 1_555 C DG 2 1_555 D DC 5 1_555 -0.337 0.808 3.321 -0.282 5.760 -70.198 -0.905 -0.302 3.254 -5.000 -0.245 -70.404 4 BC_DC11DG2:DC11DG2_DA B 11 ? A 2 ? C 2 ? D 11 ? 1 C DG 2 1_555 D DC 5 1_555 C DT 3 1_555 D DA 4 1_555 -0.653 -0.184 3.295 -1.173 -0.690 22.088 -0.212 1.249 3.329 -1.799 3.058 22.130 5 CC_DG2DT3:DA10DC11_DD C 2 ? D 11 ? C 3 ? D 10 ? 1 C DT 3 1_555 D DA 4 1_555 C DA 4 1_555 D DT 3 1_555 0.504 -0.256 3.138 1.482 1.485 42.296 -0.500 -0.553 3.143 2.056 -2.053 42.345 6 CC_DT3DA4:DT9DA10_DD C 3 ? D 10 ? C 4 ? D 9 ? 1 C DA 4 1_555 D DT 3 1_555 C DC 5 1_555 D DG 2 1_555 1.012 -0.605 3.011 -0.321 7.227 30.259 -2.371 -1.943 2.784 13.602 0.605 31.093 7 CC_DA4DC5:DG8DT9_DD C 4 ? D 9 ? C 5 ? D 8 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '13-methyl[1,3]benzodioxolo[5,6-c][1,3]dioxolo[4,5-i]phenanthridin-13-ium' SAU 3 'CALCIUM ION' CA 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3NP6 _pdbx_initial_refinement_model.details 'PDB ENTRY 3NP6' # loop_ _pdbx_reflns_twin.domain_id _pdbx_reflns_twin.crystal_id _pdbx_reflns_twin.diffrn_id _pdbx_reflns_twin.fraction _pdbx_reflns_twin.operator _pdbx_reflns_twin.type _pdbx_reflns_twin.mean_F_square_over_mean_F2 _pdbx_reflns_twin.mean_I2_over_mean_I_square 1 1 1 0.746 'H, K, L' ? ? ? 2 1 1 0.254 h+k,-k,-l ? ? ? #