data_3R86 # _entry.id 3R86 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3R86 pdb_00003r86 10.2210/pdb3r86/pdb NDB NA1035 ? ? RCSB RCSB064610 ? ? WWPDB D_1000064610 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-04-06 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2018-02-14 4 'Structure model' 1 3 2024-03-20 5 'Structure model' 1 4 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Experimental preparation' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' exptl_crystal_grow 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 5 4 'Structure model' pdbx_struct_conn_angle 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_site 8 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_exptl_crystal_grow.pdbx_details' 2 3 'Structure model' '_exptl_crystal_grow.temp' 3 4 'Structure model' '_database_2.pdbx_DOI' 4 4 'Structure model' '_database_2.pdbx_database_accession' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.value' 17 4 'Structure model' '_struct_conn.pdbx_dist_value' 18 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 19 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 20 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 21 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 22 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 23 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 24 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 25 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 26 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 27 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 28 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 29 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 30 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 31 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 32 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 33 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3R86 _pdbx_database_status.recvd_initial_deposition_date 2011-03-23 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Venkadesh, S.' 1 'Mandal, P.K.' 2 'Gautham, N.' 3 # _citation.id primary _citation.title 'Crystal structure of d(CCGGTACCGG)2 as B-DNA duplex' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Venkadesh, S.' 1 ? primary 'Mandal, P.K.' 2 ? primary 'Gautham, N.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*CP*CP*GP*GP*TP*AP*CP*CP*GP*G)-3') ; 3045.992 2 ? ? ? ? 2 non-polymer syn 'COBALT (II) ION' 58.933 3 ? ? ? ? 3 water nat water 18.015 11 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DC)(DC)(DG)(DG)(DT)(DA)(DC)(DC)(DG)(DG)' _entity_poly.pdbx_seq_one_letter_code_can CCGGTACCGG _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'COBALT (II) ION' CO 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DC n 1 3 DG n 1 4 DG n 1 5 DT n 1 6 DA n 1 7 DC n 1 8 DC n 1 9 DG n 1 10 DG n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'Chemically synthesized' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight CO non-polymer . 'COBALT (II) ION' ? 'Co 2' 58.933 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC C A . n A 1 2 DC 2 2 2 DC C A . n A 1 3 DG 3 3 3 DG G A . n A 1 4 DG 4 4 4 DG G A . n A 1 5 DT 5 5 5 DT T A . n A 1 6 DA 6 6 6 DA A A . n A 1 7 DC 7 7 7 DC C A . n A 1 8 DC 8 8 8 DC C A . n A 1 9 DG 9 9 9 DG G A . n A 1 10 DG 10 10 10 DG G A . n B 1 1 DC 1 1 1 DC C B . n B 1 2 DC 2 2 2 DC C B . n B 1 3 DG 3 3 3 DG G B . n B 1 4 DG 4 4 4 DG G B . n B 1 5 DT 5 5 5 DT T B . n B 1 6 DA 6 6 6 DA A B . n B 1 7 DC 7 7 7 DC C B . n B 1 8 DC 8 8 8 DC C B . n B 1 9 DG 9 9 9 DG G B . n B 1 10 DG 10 10 10 DG G B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CO 1 11 2 CO CO A . D 2 CO 1 11 1 CO CO B . E 2 CO 1 12 3 CO CO B . F 3 HOH 1 12 5 HOH HOH A . F 3 HOH 2 13 6 HOH HOH A . F 3 HOH 3 14 9 HOH HOH A . F 3 HOH 4 15 10 HOH HOH A . G 3 HOH 1 13 1 HOH HOH B . G 3 HOH 2 14 2 HOH HOH B . G 3 HOH 3 15 3 HOH HOH B . G 3 HOH 4 16 4 HOH HOH B . G 3 HOH 5 17 7 HOH HOH B . G 3 HOH 6 18 8 HOH HOH B . G 3 HOH 7 19 11 HOH HOH B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal _software.date _software.type _software.location _software.language MxCuBE 'data collection' . ? 1 ? ? ? ? AMoRE phasing . ? 2 ? ? ? ? REFMAC refinement 5.5.0109 ? 3 ? ? ? ? AUTOMAR 'data reduction' . ? 4 ? ? ? ? # _cell.entry_id 3R86 _cell.length_a 32.756 _cell.length_b 32.756 _cell.length_c 93.648 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3R86 _symmetry.space_group_name_H-M 'P 61' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3R86 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.38 _exptl_crystal.density_percent_sol 48.33 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details '1mM DNA, 50mM Sodium Cacodylate buffer, 5mM CoCl2,1mM Spermine, 50% MPD, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2010-07-07 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111) monochromator' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.604 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE BM14' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline BM14 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.604 # _reflns.entry_id 3R86 _reflns.observed_criterion_sigma_I 1.0 _reflns.observed_criterion_sigma_F 1.0 _reflns.d_resolution_low 28.4 _reflns.d_resolution_high 2.8 _reflns.number_obs 1382 _reflns.number_all 1410 _reflns.percent_possible_obs 98.0 _reflns.pdbx_Rmerge_I_obs 0.051 _reflns.pdbx_Rsym_value 0.047 _reflns.pdbx_netI_over_sigmaI 3.7 _reflns.B_iso_Wilson_estimate 67.3 _reflns.pdbx_redundancy 5.4 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.803 _reflns_shell.d_res_low 2.873 _reflns_shell.percent_possible_all 99.0 _reflns_shell.Rmerge_I_obs 0.390 _reflns_shell.pdbx_Rsym_value 0.402 _reflns_shell.meanI_over_sigI_obs 1.4 _reflns_shell.pdbx_redundancy 5.5 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 77 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3R86 _refine.ls_number_reflns_obs 1310 _refine.ls_number_reflns_all 1410 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 28.37 _refine.ls_d_res_high 2.80 _refine.ls_percent_reflns_obs 97.94 _refine.ls_R_factor_obs 0.27561 _refine.ls_R_factor_all 0.27561 _refine.ls_R_factor_R_work 0.26004 _refine.ls_R_factor_R_free 0.27001 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.2 _refine.ls_number_reflns_R_free 72 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.950 _refine.correlation_coeff_Fo_to_Fc_free 0.934 _refine.B_iso_mean 45.978 _refine.aniso_B[1][1] -7.96 _refine.aniso_B[2][2] -7.96 _refine.aniso_B[3][3] 15.92 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'B-DNA fiber model' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model isotropic _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free 0.105 _refine.overall_SU_ML 0.384 _refine.overall_SU_B 21.376 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 404 _refine_hist.pdbx_number_atoms_ligand 3 _refine_hist.number_atoms_solvent 11 _refine_hist.number_atoms_total 418 _refine_hist.d_res_high 2.80 _refine_hist.d_res_low 28.37 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.029 0.021 ? 452 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 3.900 3.000 ? 694 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.183 0.200 ? 78 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.013 0.020 ? 210 ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.803 _refine_ls_shell.d_res_low 2.875 _refine_ls_shell.number_reflns_R_work 77 _refine_ls_shell.R_factor_R_work 0.655 _refine_ls_shell.percent_reflns_obs 84.85 _refine_ls_shell.R_factor_R_free 0.892 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 7 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 77 _refine_ls_shell.redundancy_reflns_obs ? # _database_PDB_matrix.entry_id 3R86 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3R86 _struct.title 'Crystal structure of d(CCGGTACCGG)2 as B-DNA duplex grown with 5 mM CoCl2' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3R86 _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'Duplex, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 3 ? G N N 3 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 3R86 _struct_ref.pdbx_db_accession 3R86 _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3R86 A 1 ? 10 ? 3R86 1 ? 10 ? 1 10 2 1 3R86 B 1 ? 10 ? 3R86 1 ? 10 ? 1 10 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 920 ? 1 MORE -3 ? 1 'SSA (A^2)' 3810 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A DG 3 C8 ? ? ? 1_555 C CO . CO ? ? A DG 3 A CO 11 1_555 ? ? ? ? ? ? ? 2.787 ? ? metalc2 metalc ? ? C CO . CO ? ? ? 1_555 F HOH . O ? ? A CO 11 A HOH 13 1_555 ? ? ? ? ? ? ? 2.225 ? ? metalc3 metalc ? ? B DG 3 N7 ? ? ? 1_555 D CO . CO ? ? B DG 3 B CO 11 1_555 ? ? ? ? ? ? ? 2.520 ? ? metalc4 metalc ? ? B DG 9 N7 ? ? ? 1_555 E CO . CO ? ? B DG 9 B CO 12 1_555 ? ? ? ? ? ? ? 2.560 ? ? metalc5 metalc ? ? D CO . CO ? ? ? 1_555 G HOH . O ? ? B CO 11 B HOH 14 1_555 ? ? ? ? ? ? ? 2.382 ? ? metalc6 metalc ? ? E CO . CO ? ? ? 1_555 G HOH . O ? ? B CO 12 B HOH 15 1_555 ? ? ? ? ? ? ? 2.771 ? ? hydrog1 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 9 O6 ? ? A DC 1 B DG 9 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 10 O6 ? ? A DC 1 B DG 10 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog3 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DG 9 O6 ? ? A DC 2 B DG 9 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog4 hydrog ? ? A DG 3 N1 ? ? ? 1_555 B DC 8 N3 ? ? A DG 3 B DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 3 N2 ? ? ? 1_555 B DC 8 O2 ? ? A DG 3 B DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DC 8 N4 ? ? A DG 3 B DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC 7 N3 ? ? A DG 4 B DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DC 7 O2 ? ? A DG 4 B DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC 7 N4 ? ? A DG 4 B DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DT 5 O4 ? ? ? 1_555 B DA 6 N6 ? ? A DT 5 B DA 6 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? hydrog11 hydrog ? ? A DA 6 N1 ? ? ? 1_555 B DT 5 N3 ? ? A DA 6 B DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DA 6 N6 ? ? ? 1_555 B DT 5 O4 ? ? A DA 6 B DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 7 N3 ? ? ? 1_555 B DG 4 N1 ? ? A DC 7 B DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 7 N4 ? ? ? 1_555 B DG 4 O6 ? ? A DC 7 B DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 7 O2 ? ? ? 1_555 B DG 4 N2 ? ? A DC 7 B DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 8 N3 ? ? ? 1_555 B DG 3 N1 ? ? A DC 8 B DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DC 8 N4 ? ? ? 1_555 B DG 3 O6 ? ? A DC 8 B DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 8 O2 ? ? ? 1_555 B DG 3 N2 ? ? A DC 8 B DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DG 9 N1 ? ? ? 1_555 B DC 2 N3 ? ? A DG 9 B DC 2 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog20 hydrog ? ? A DG 10 N1 ? ? ? 1_555 B DC 1 N3 ? ? A DG 10 B DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 10 N2 ? ? ? 1_555 B DC 1 O2 ? ? A DG 10 B DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B DC 1 N4 ? ? A DG 10 B DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 C8 ? A DG 3 ? A DG 3 ? 1_555 CO ? C CO . ? A CO 11 ? 1_555 O ? F HOH . ? A HOH 13 ? 1_555 78.1 ? 2 N7 ? B DG 3 ? B DG 3 ? 1_555 CO ? D CO . ? B CO 11 ? 1_555 O ? G HOH . ? B HOH 14 ? 1_555 78.4 ? 3 N7 ? B DG 9 ? B DG 9 ? 1_555 CO ? E CO . ? B CO 12 ? 1_555 O ? G HOH . ? B HOH 15 ? 1_555 57.1 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CO 11 ? 2 'BINDING SITE FOR RESIDUE CO A 11' AC2 Software B CO 11 ? 2 'BINDING SITE FOR RESIDUE CO B 11' AC3 Software B CO 12 ? 2 'BINDING SITE FOR RESIDUE CO B 12' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 DG A 3 ? DG A 3 . ? 1_555 ? 2 AC1 2 HOH F . ? HOH A 13 . ? 1_555 ? 3 AC2 2 DG B 3 ? DG B 3 . ? 1_555 ? 4 AC2 2 HOH G . ? HOH B 14 . ? 1_555 ? 5 AC3 2 DG B 9 ? DG B 9 . ? 1_555 ? 6 AC3 2 HOH G . ? HOH B 15 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "C5'" A DC 2 ? ? "C4'" A DC 2 ? ? 1.562 1.512 0.050 0.007 N 2 1 N1 A DC 2 ? ? C2 A DC 2 ? ? 1.494 1.397 0.097 0.010 N 3 1 C2 A DC 2 ? ? N3 A DC 2 ? ? 1.411 1.353 0.058 0.008 N 4 1 N3 A DC 2 ? ? C4 A DC 2 ? ? 1.383 1.335 0.048 0.007 N 5 1 C4 A DC 2 ? ? C5 A DC 2 ? ? 1.482 1.425 0.057 0.008 N 6 1 "O3'" A DG 3 ? ? "C3'" A DG 3 ? ? 1.589 1.435 0.154 0.013 N 7 1 C2 A DG 3 ? ? N3 A DG 3 ? ? 1.378 1.323 0.055 0.008 N 8 1 C5 A DG 3 ? ? N7 A DG 3 ? ? 1.431 1.388 0.043 0.006 N 9 1 N7 A DG 3 ? ? C8 A DG 3 ? ? 1.343 1.305 0.038 0.006 N 10 1 N9 A DG 3 ? ? C4 A DG 3 ? ? 1.428 1.375 0.053 0.008 N 11 1 "C5'" A DG 4 ? ? "C4'" A DG 4 ? ? 1.558 1.512 0.046 0.007 N 12 1 N9 A DG 4 ? ? C4 A DG 4 ? ? 1.429 1.375 0.054 0.008 N 13 1 "C5'" A DT 5 ? ? "C4'" A DT 5 ? ? 1.571 1.512 0.059 0.007 N 14 1 P A DG 10 ? ? "O5'" A DG 10 ? ? 1.660 1.593 0.067 0.010 N 15 1 C6 B DG 3 ? ? N1 B DG 3 ? ? 1.434 1.391 0.043 0.007 N 16 1 "O3'" B DT 5 ? ? "C3'" B DT 5 ? ? 1.362 1.419 -0.057 0.006 N 17 1 "O3'" B DT 5 ? ? P B DA 6 ? ? 1.400 1.607 -0.207 0.012 Y 18 1 P B DA 6 ? ? "O5'" B DA 6 ? ? 1.431 1.593 -0.162 0.010 N 19 1 "C5'" B DC 7 ? ? "C4'" B DC 7 ? ? 1.558 1.512 0.046 0.007 N 20 1 N1 B DC 7 ? ? C2 B DC 7 ? ? 1.473 1.397 0.076 0.010 N 21 1 N3 B DC 7 ? ? C4 B DC 7 ? ? 1.398 1.335 0.063 0.007 N 22 1 C4 B DC 7 ? ? C5 B DC 7 ? ? 1.487 1.425 0.062 0.008 N 23 1 P B DC 8 ? ? "O5'" B DC 8 ? ? 1.655 1.593 0.062 0.010 N 24 1 "C5'" B DC 8 ? ? "C4'" B DC 8 ? ? 1.581 1.512 0.069 0.007 N 25 1 "C1'" B DC 8 ? ? N1 B DC 8 ? ? 1.614 1.488 0.126 0.013 N 26 1 C2 B DC 8 ? ? O2 B DC 8 ? ? 1.309 1.240 0.069 0.009 N 27 1 N1 B DC 8 ? ? C2 B DC 8 ? ? 1.457 1.397 0.060 0.010 N 28 1 N1 B DC 8 ? ? C6 B DC 8 ? ? 1.424 1.367 0.057 0.006 N 29 1 C2 B DC 8 ? ? N3 B DC 8 ? ? 1.423 1.353 0.070 0.008 N 30 1 N3 B DC 8 ? ? C4 B DC 8 ? ? 1.392 1.335 0.057 0.007 N 31 1 "O3'" B DG 9 ? ? "C3'" B DG 9 ? ? 1.548 1.435 0.113 0.013 N 32 1 N9 B DG 10 ? ? C4 B DG 10 ? ? 1.426 1.375 0.051 0.008 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 113.86 108.30 5.56 0.30 N 2 1 N3 A DC 1 ? ? C4 A DC 1 ? ? C5 A DC 1 ? ? 119.44 121.90 -2.46 0.40 N 3 1 "O4'" A DC 2 ? ? "C4'" A DC 2 ? ? "C3'" A DC 2 ? ? 99.66 104.50 -4.84 0.40 N 4 1 "O4'" A DC 2 ? ? "C1'" A DC 2 ? ? "C2'" A DC 2 ? ? 98.44 105.90 -7.46 0.80 N 5 1 "O4'" A DC 2 ? ? "C1'" A DC 2 ? ? N1 A DC 2 ? ? 99.41 108.00 -8.59 0.70 N 6 1 N1 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 127.50 118.90 8.60 0.60 N 7 1 N3 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 113.68 121.90 -8.22 0.70 N 8 1 C6 A DC 2 ? ? N1 A DC 2 ? ? "C1'" A DC 2 ? ? 108.17 120.80 -12.63 1.20 N 9 1 C2 A DC 2 ? ? N1 A DC 2 ? ? "C1'" A DC 2 ? ? 131.93 118.80 13.13 1.10 N 10 1 "C3'" A DC 2 ? ? "O3'" A DC 2 ? ? P A DG 3 ? ? 131.43 119.70 11.73 1.20 Y 11 1 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 113.85 108.30 5.55 0.30 N 12 1 N3 A DG 3 ? ? C4 A DG 3 ? ? C5 A DG 3 ? ? 125.24 128.60 -3.36 0.50 N 13 1 N7 A DG 3 ? ? C8 A DG 3 ? ? N9 A DG 3 ? ? 116.46 113.10 3.36 0.50 N 14 1 C8 A DG 3 ? ? N9 A DG 3 ? ? C4 A DG 3 ? ? 103.17 106.40 -3.23 0.40 N 15 1 N1 A DG 3 ? ? C2 A DG 3 ? ? N2 A DG 3 ? ? 110.36 116.20 -5.84 0.90 N 16 1 N3 A DG 3 ? ? C2 A DG 3 ? ? N2 A DG 3 ? ? 125.23 119.90 5.33 0.70 N 17 1 N1 A DG 3 ? ? C6 A DG 3 ? ? O6 A DG 3 ? ? 112.32 119.90 -7.58 0.60 N 18 1 C5 A DG 3 ? ? C6 A DG 3 ? ? O6 A DG 3 ? ? 133.67 128.60 5.07 0.60 N 19 1 "C3'" A DG 3 ? ? "O3'" A DG 3 ? ? P A DG 4 ? ? 133.21 119.70 13.51 1.20 Y 20 1 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 116.18 108.30 7.88 0.30 N 21 1 N3 A DG 4 ? ? C4 A DG 4 ? ? C5 A DG 4 ? ? 124.44 128.60 -4.16 0.50 N 22 1 N3 A DG 4 ? ? C4 A DG 4 ? ? N9 A DG 4 ? ? 130.94 126.00 4.94 0.60 N 23 1 C6 A DG 4 ? ? C5 A DG 4 ? ? N7 A DG 4 ? ? 126.11 130.40 -4.29 0.60 N 24 1 N1 A DG 4 ? ? C2 A DG 4 ? ? N2 A DG 4 ? ? 107.26 116.20 -8.94 0.90 N 25 1 N3 A DG 4 ? ? C2 A DG 4 ? ? N2 A DG 4 ? ? 125.99 119.90 6.09 0.70 N 26 1 "C3'" A DT 5 ? ? "C2'" A DT 5 ? ? "C1'" A DT 5 ? ? 91.04 102.40 -11.36 0.80 N 27 1 N1 A DT 5 ? ? "C1'" A DT 5 ? ? "C2'" A DT 5 ? ? 125.53 114.30 11.23 1.40 N 28 1 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 110.68 108.30 2.38 0.30 N 29 1 "C3'" A DA 6 ? ? "C2'" A DA 6 ? ? "C1'" A DA 6 ? ? 97.07 102.40 -5.33 0.80 N 30 1 "O4'" A DA 6 ? ? "C1'" A DA 6 ? ? N9 A DA 6 ? ? 99.76 108.00 -8.24 0.70 N 31 1 "O4'" A DC 7 ? ? "C4'" A DC 7 ? ? "C3'" A DC 7 ? ? 101.34 104.50 -3.16 0.40 N 32 1 C2 A DC 7 ? ? N3 A DC 7 ? ? C4 A DC 7 ? ? 116.73 119.90 -3.17 0.50 N 33 1 "C3'" A DC 7 ? ? "O3'" A DC 7 ? ? P A DC 8 ? ? 129.34 119.70 9.64 1.20 Y 34 1 "O4'" A DC 8 ? ? "C4'" A DC 8 ? ? "C3'" A DC 8 ? ? 99.46 104.50 -5.04 0.40 N 35 1 "O4'" A DC 8 ? ? "C1'" A DC 8 ? ? N1 A DC 8 ? ? 111.22 108.30 2.92 0.30 N 36 1 C2 A DC 8 ? ? N1 A DC 8 ? ? "C1'" A DC 8 ? ? 125.94 118.80 7.14 1.10 N 37 1 "C5'" A DG 9 ? ? "C4'" A DG 9 ? ? "O4'" A DG 9 ? ? 120.32 109.80 10.52 1.10 N 38 1 "C1'" A DG 9 ? ? "O4'" A DG 9 ? ? "C4'" A DG 9 ? ? 103.73 110.10 -6.37 1.00 N 39 1 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 117.28 108.30 8.98 0.30 N 40 1 C4 A DG 9 ? ? C5 A DG 9 ? ? N7 A DG 9 ? ? 113.43 110.80 2.63 0.40 N 41 1 C8 A DG 9 ? ? N9 A DG 9 ? ? C4 A DG 9 ? ? 109.58 106.40 3.18 0.40 N 42 1 N9 A DG 9 ? ? C4 A DG 9 ? ? C5 A DG 9 ? ? 101.97 105.40 -3.43 0.40 N 43 1 N3 A DG 9 ? ? C2 A DG 9 ? ? N2 A DG 9 ? ? 125.66 119.90 5.76 0.70 N 44 1 "O4'" B DC 1 ? ? "C4'" B DC 1 ? ? "C3'" B DC 1 ? ? 101.74 104.50 -2.76 0.40 N 45 1 "O4'" B DC 1 ? ? "C1'" B DC 1 ? ? N1 B DC 1 ? ? 102.32 108.00 -5.68 0.70 N 46 1 "O4'" B DC 2 ? ? "C1'" B DC 2 ? ? N1 B DC 2 ? ? 111.46 108.30 3.16 0.30 N 47 1 N1 B DC 2 ? ? C2 B DC 2 ? ? O2 B DC 2 ? ? 123.86 118.90 4.96 0.60 N 48 1 C6 B DC 2 ? ? N1 B DC 2 ? ? "C1'" B DC 2 ? ? 109.37 120.80 -11.43 1.20 N 49 1 C2 B DC 2 ? ? N1 B DC 2 ? ? "C1'" B DC 2 ? ? 128.57 118.80 9.77 1.10 N 50 1 "C4'" B DG 3 ? ? "C3'" B DG 3 ? ? "C2'" B DG 3 ? ? 97.83 102.20 -4.37 0.70 N 51 1 "O4'" B DG 3 ? ? "C1'" B DG 3 ? ? N9 B DG 3 ? ? 103.22 108.00 -4.78 0.70 N 52 1 C2 B DG 3 ? ? N3 B DG 3 ? ? C4 B DG 3 ? ? 115.50 111.90 3.60 0.50 N 53 1 C5 B DG 3 ? ? C6 B DG 3 ? ? N1 B DG 3 ? ? 114.56 111.50 3.06 0.50 N 54 1 "C3'" B DG 3 ? ? "O3'" B DG 3 ? ? P B DG 4 ? ? 128.14 119.70 8.44 1.20 Y 55 1 C5 B DG 4 ? ? C6 B DG 4 ? ? O6 B DG 4 ? ? 124.72 128.60 -3.88 0.60 N 56 1 "O4'" B DT 5 ? ? "C4'" B DT 5 ? ? "C3'" B DT 5 ? ? 95.77 104.50 -8.73 0.40 N 57 1 "C1'" B DT 5 ? ? "O4'" B DT 5 ? ? "C4'" B DT 5 ? ? 103.91 110.10 -6.19 1.00 N 58 1 "C4'" B DT 5 ? ? "C3'" B DT 5 ? ? "O3'" B DT 5 ? ? 132.47 112.30 20.17 2.00 N 59 1 "C4'" B DT 5 ? ? "C3'" B DT 5 ? ? "C2'" B DT 5 ? ? 109.11 103.10 6.01 0.90 N 60 1 "C3'" B DT 5 ? ? "C2'" B DT 5 ? ? "C1'" B DT 5 ? ? 96.40 102.40 -6.00 0.80 N 61 1 C5 B DT 5 ? ? C4 B DT 5 ? ? O4 B DT 5 ? ? 120.05 124.90 -4.85 0.70 N 62 1 "O5'" B DA 6 ? ? P B DA 6 ? ? OP1 B DA 6 ? ? 119.43 110.70 8.73 1.20 N 63 1 P B DA 6 ? ? "O5'" B DA 6 ? ? "C5'" B DA 6 ? ? 130.89 120.90 9.99 1.60 N 64 1 "O4'" B DA 6 ? ? "C4'" B DA 6 ? ? "C3'" B DA 6 ? ? 101.27 104.50 -3.23 0.40 N 65 1 C2 B DC 7 ? ? N3 B DC 7 ? ? C4 B DC 7 ? ? 115.39 119.90 -4.51 0.50 N 66 1 N3 B DC 7 ? ? C4 B DC 7 ? ? C5 B DC 7 ? ? 125.07 121.90 3.17 0.40 N 67 1 C6 B DC 7 ? ? N1 B DC 7 ? ? "C1'" B DC 7 ? ? 109.92 120.80 -10.88 1.20 N 68 1 C2 B DC 7 ? ? N1 B DC 7 ? ? "C1'" B DC 7 ? ? 129.20 118.80 10.40 1.10 N 69 1 "C3'" B DC 7 ? ? "O3'" B DC 7 ? ? P B DC 8 ? ? 127.28 119.70 7.58 1.20 Y 70 1 P B DC 8 ? ? "O5'" B DC 8 ? ? "C5'" B DC 8 ? ? 131.59 120.90 10.69 1.60 N 71 1 "C3'" B DC 8 ? ? "C2'" B DC 8 ? ? "C1'" B DC 8 ? ? 96.64 102.40 -5.76 0.80 N 72 1 "O4'" B DC 8 ? ? "C1'" B DC 8 ? ? N1 B DC 8 ? ? 115.68 108.30 7.38 0.30 N 73 1 N1 B DC 8 ? ? C2 B DC 8 ? ? O2 B DC 8 ? ? 125.04 118.90 6.14 0.60 N 74 1 N3 B DC 8 ? ? C2 B DC 8 ? ? O2 B DC 8 ? ? 117.03 121.90 -4.87 0.70 N 75 1 "C1'" B DG 9 ? ? "O4'" B DG 9 ? ? "C4'" B DG 9 ? ? 104.04 110.10 -6.06 1.00 N 76 1 N9 B DG 9 ? ? "C1'" B DG 9 ? ? "C2'" B DG 9 ? ? 125.25 114.30 10.95 1.40 N 77 1 "O4'" B DG 9 ? ? "C1'" B DG 9 ? ? N9 B DG 9 ? ? 115.47 108.30 7.17 0.30 N 78 1 C8 B DG 9 ? ? N9 B DG 9 ? ? C4 B DG 9 ? ? 103.79 106.40 -2.61 0.40 N 79 1 N3 B DG 9 ? ? C2 B DG 9 ? ? N2 B DG 9 ? ? 115.24 119.90 -4.66 0.70 N 80 1 C5 B DG 9 ? ? C6 B DG 9 ? ? O6 B DG 9 ? ? 124.98 128.60 -3.62 0.60 N 81 1 "C3'" B DG 9 ? ? "O3'" B DG 9 ? ? P B DG 10 ? ? 131.44 119.70 11.74 1.20 Y 82 1 "O4'" B DG 10 ? ? "C4'" B DG 10 ? ? "C3'" B DG 10 ? ? 100.11 104.50 -4.39 0.40 N 83 1 "C5'" B DG 10 ? ? "C4'" B DG 10 ? ? "O4'" B DG 10 ? ? 118.71 109.80 8.91 1.10 N 84 1 C2 B DG 10 ? ? N3 B DG 10 ? ? C4 B DG 10 ? ? 115.74 111.90 3.84 0.50 N 85 1 N3 B DG 10 ? ? C4 B DG 10 ? ? C5 B DG 10 ? ? 123.87 128.60 -4.73 0.50 N 86 1 C8 B DG 10 ? ? N9 B DG 10 ? ? C4 B DG 10 ? ? 103.65 106.40 -2.75 0.40 N 87 1 N3 B DG 10 ? ? C4 B DG 10 ? ? N9 B DG 10 ? ? 129.96 126.00 3.96 0.60 N # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal CO CO CO N N 1 DA OP3 O N N 2 DA P P N N 3 DA OP1 O N N 4 DA OP2 O N N 5 DA "O5'" O N N 6 DA "C5'" C N N 7 DA "C4'" C N R 8 DA "O4'" O N N 9 DA "C3'" C N S 10 DA "O3'" O N N 11 DA "C2'" C N N 12 DA "C1'" C N R 13 DA N9 N Y N 14 DA C8 C Y N 15 DA N7 N Y N 16 DA C5 C Y N 17 DA C6 C Y N 18 DA N6 N N N 19 DA N1 N Y N 20 DA C2 C Y N 21 DA N3 N Y N 22 DA C4 C Y N 23 DA HOP3 H N N 24 DA HOP2 H N N 25 DA "H5'" H N N 26 DA "H5''" H N N 27 DA "H4'" H N N 28 DA "H3'" H N N 29 DA "HO3'" H N N 30 DA "H2'" H N N 31 DA "H2''" H N N 32 DA "H1'" H N N 33 DA H8 H N N 34 DA H61 H N N 35 DA H62 H N N 36 DA H2 H N N 37 DC OP3 O N N 38 DC P P N N 39 DC OP1 O N N 40 DC OP2 O N N 41 DC "O5'" O N N 42 DC "C5'" C N N 43 DC "C4'" C N R 44 DC "O4'" O N N 45 DC "C3'" C N S 46 DC "O3'" O N N 47 DC "C2'" C N N 48 DC "C1'" C N R 49 DC N1 N N N 50 DC C2 C N N 51 DC O2 O N N 52 DC N3 N N N 53 DC C4 C N N 54 DC N4 N N N 55 DC C5 C N N 56 DC C6 C N N 57 DC HOP3 H N N 58 DC HOP2 H N N 59 DC "H5'" H N N 60 DC "H5''" H N N 61 DC "H4'" H N N 62 DC "H3'" H N N 63 DC "HO3'" H N N 64 DC "H2'" H N N 65 DC "H2''" H N N 66 DC "H1'" H N N 67 DC H41 H N N 68 DC H42 H N N 69 DC H5 H N N 70 DC H6 H N N 71 DG OP3 O N N 72 DG P P N N 73 DG OP1 O N N 74 DG OP2 O N N 75 DG "O5'" O N N 76 DG "C5'" C N N 77 DG "C4'" C N R 78 DG "O4'" O N N 79 DG "C3'" C N S 80 DG "O3'" O N N 81 DG "C2'" C N N 82 DG "C1'" C N R 83 DG N9 N Y N 84 DG C8 C Y N 85 DG N7 N Y N 86 DG C5 C Y N 87 DG C6 C N N 88 DG O6 O N N 89 DG N1 N N N 90 DG C2 C N N 91 DG N2 N N N 92 DG N3 N N N 93 DG C4 C Y N 94 DG HOP3 H N N 95 DG HOP2 H N N 96 DG "H5'" H N N 97 DG "H5''" H N N 98 DG "H4'" H N N 99 DG "H3'" H N N 100 DG "HO3'" H N N 101 DG "H2'" H N N 102 DG "H2''" H N N 103 DG "H1'" H N N 104 DG H8 H N N 105 DG H1 H N N 106 DG H21 H N N 107 DG H22 H N N 108 DT OP3 O N N 109 DT P P N N 110 DT OP1 O N N 111 DT OP2 O N N 112 DT "O5'" O N N 113 DT "C5'" C N N 114 DT "C4'" C N R 115 DT "O4'" O N N 116 DT "C3'" C N S 117 DT "O3'" O N N 118 DT "C2'" C N N 119 DT "C1'" C N R 120 DT N1 N N N 121 DT C2 C N N 122 DT O2 O N N 123 DT N3 N N N 124 DT C4 C N N 125 DT O4 O N N 126 DT C5 C N N 127 DT C7 C N N 128 DT C6 C N N 129 DT HOP3 H N N 130 DT HOP2 H N N 131 DT "H5'" H N N 132 DT "H5''" H N N 133 DT "H4'" H N N 134 DT "H3'" H N N 135 DT "HO3'" H N N 136 DT "H2'" H N N 137 DT "H2''" H N N 138 DT "H1'" H N N 139 DT H3 H N N 140 DT H71 H N N 141 DT H72 H N N 142 DT H73 H N N 143 DT H6 H N N 144 HOH O O N N 145 HOH H1 H N N 146 HOH H2 H N N 147 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DT OP3 P sing N N 113 DT OP3 HOP3 sing N N 114 DT P OP1 doub N N 115 DT P OP2 sing N N 116 DT P "O5'" sing N N 117 DT OP2 HOP2 sing N N 118 DT "O5'" "C5'" sing N N 119 DT "C5'" "C4'" sing N N 120 DT "C5'" "H5'" sing N N 121 DT "C5'" "H5''" sing N N 122 DT "C4'" "O4'" sing N N 123 DT "C4'" "C3'" sing N N 124 DT "C4'" "H4'" sing N N 125 DT "O4'" "C1'" sing N N 126 DT "C3'" "O3'" sing N N 127 DT "C3'" "C2'" sing N N 128 DT "C3'" "H3'" sing N N 129 DT "O3'" "HO3'" sing N N 130 DT "C2'" "C1'" sing N N 131 DT "C2'" "H2'" sing N N 132 DT "C2'" "H2''" sing N N 133 DT "C1'" N1 sing N N 134 DT "C1'" "H1'" sing N N 135 DT N1 C2 sing N N 136 DT N1 C6 sing N N 137 DT C2 O2 doub N N 138 DT C2 N3 sing N N 139 DT N3 C4 sing N N 140 DT N3 H3 sing N N 141 DT C4 O4 doub N N 142 DT C4 C5 sing N N 143 DT C5 C7 sing N N 144 DT C5 C6 doub N N 145 DT C7 H71 sing N N 146 DT C7 H72 sing N N 147 DT C7 H73 sing N N 148 DT C6 H6 sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3R86 'double helix' 3R86 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 B DG 10 1_555 -1.152 0.143 0.500 -7.190 -0.164 -14.323 1 A_DC1:DG10_B A 1 ? B 10 ? ? 1 1 A DC 2 1_555 B DG 9 1_555 -0.593 0.339 1.216 -7.803 -7.148 -10.441 2 A_DC2:DG9_B A 2 ? B 9 ? ? 1 1 A DG 3 1_555 B DC 8 1_555 0.257 0.208 0.881 15.149 -12.235 -11.147 3 A_DG3:DC8_B A 3 ? B 8 ? 19 1 1 A DG 4 1_555 B DC 7 1_555 0.386 0.013 0.753 16.694 9.562 -9.993 4 A_DG4:DC7_B A 4 ? B 7 ? 19 1 1 A DT 5 1_555 B DA 6 1_555 0.005 0.716 0.102 16.987 -10.925 -18.625 5 A_DT5:DA6_B A 5 ? B 6 ? ? ? 1 A DA 6 1_555 B DT 5 1_555 0.647 -0.541 0.889 16.951 -10.778 -7.250 6 A_DA6:DT5_B A 6 ? B 5 ? 20 1 1 A DC 7 1_555 B DG 4 1_555 -0.392 -0.551 0.123 -2.139 5.865 -2.600 7 A_DC7:DG4_B A 7 ? B 4 ? 19 1 1 A DC 8 1_555 B DG 3 1_555 -0.354 -0.394 0.698 -6.748 0.900 -13.817 8 A_DC8:DG3_B A 8 ? B 3 ? 19 1 1 A DG 9 1_555 B DC 2 1_555 0.232 0.176 0.407 1.937 -2.365 -22.959 9 A_DG9:DC2_B A 9 ? B 2 ? ? 1 1 A DG 10 1_555 B DC 1 1_555 0.376 -0.500 0.288 -6.882 -7.311 -7.818 10 A_DG10:DC1_B A 10 ? B 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 B DG 10 1_555 A DC 2 1_555 B DG 9 1_555 1.944 -0.910 3.090 -4.525 11.430 52.569 -1.640 -2.397 2.689 12.709 5.031 53.888 1 AA_DC1DC2:DG9DG10_BB A 1 ? B 10 ? A 2 ? B 9 ? 1 A DC 2 1_555 B DG 9 1_555 A DG 3 1_555 B DC 8 1_555 -0.972 0.760 2.567 -1.741 5.355 26.661 0.519 1.707 2.721 11.450 3.724 27.239 2 AA_DC2DG3:DC8DG9_BB A 2 ? B 9 ? A 3 ? B 8 ? 1 A DG 3 1_555 B DC 8 1_555 A DG 4 1_555 B DC 7 1_555 -0.202 0.254 3.428 -7.867 -13.327 35.288 2.122 -0.718 3.112 -20.793 12.274 38.433 3 AA_DG3DG4:DC7DC8_BB A 3 ? B 8 ? A 4 ? B 7 ? 1 A DG 4 1_555 B DC 7 1_555 A DT 5 1_555 B DA 6 1_555 0.298 -0.343 3.451 1.379 -8.024 27.013 1.307 -0.267 3.419 -16.702 -2.870 28.191 4 AA_DG4DT5:DA6DC7_BB A 4 ? B 7 ? A 5 ? B 6 ? 1 A DT 5 1_555 B DA 6 1_555 A DA 6 1_555 B DT 5 1_555 0.156 -1.182 3.226 -1.024 5.131 42.114 -2.136 -0.317 3.064 7.108 1.418 42.423 5 AA_DT5DA6:DT5DA6_BB A 5 ? B 6 ? A 6 ? B 5 ? 1 A DA 6 1_555 B DT 5 1_555 A DC 7 1_555 B DG 4 1_555 0.393 -1.602 3.664 4.728 -3.592 30.923 -2.176 0.297 3.837 -6.659 -8.767 31.474 6 AA_DA6DC7:DG4DT5_BB A 6 ? B 5 ? A 7 ? B 4 ? 1 A DC 7 1_555 B DG 4 1_555 A DC 8 1_555 B DG 3 1_555 -0.395 0.241 3.383 -0.262 0.577 35.356 0.309 0.610 3.390 0.950 0.431 35.362 7 AA_DC7DC8:DG3DG4_BB A 7 ? B 4 ? A 8 ? B 3 ? 1 A DC 8 1_555 B DG 3 1_555 A DG 9 1_555 B DC 2 1_555 -0.308 0.240 3.272 5.475 -1.484 27.345 0.847 1.929 3.134 -3.097 -11.426 27.916 8 AA_DC8DG9:DC2DG3_BB A 8 ? B 3 ? A 9 ? B 2 ? 1 A DG 9 1_555 B DC 2 1_555 A DG 10 1_555 B DC 1 1_555 0.812 -0.034 3.393 -2.233 4.208 44.095 -0.447 -1.289 3.333 5.585 2.963 44.338 9 AA_DG9DG10:DC1DC2_BB A 9 ? B 2 ? A 10 ? B 1 ? # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type other _pdbx_initial_refinement_model.source_name ? _pdbx_initial_refinement_model.details 'B-DNA fiber model' # loop_ _pdbx_reflns_twin.domain_id _pdbx_reflns_twin.crystal_id _pdbx_reflns_twin.diffrn_id _pdbx_reflns_twin.type _pdbx_reflns_twin.operator _pdbx_reflns_twin.fraction 1 1 1 ? 'H, K, L' 0.485 2 1 1 ? h+k,-k,-l 0.515 # _atom_sites.entry_id 3R86 _atom_sites.fract_transf_matrix[1][1] 0.030529 _atom_sites.fract_transf_matrix[1][2] 0.017626 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.035252 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010678 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CO N O P # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 O "O5'" . DC A 1 1 ? 14.147 -0.013 8.320 1.00 54.41 ? 1 DC A "O5'" 1 ATOM 2 C "C5'" . DC A 1 1 ? 13.442 -0.064 7.084 1.00 47.83 ? 1 DC A "C5'" 1 ATOM 3 C "C4'" . DC A 1 1 ? 14.368 0.197 5.898 1.00 46.31 ? 1 DC A "C4'" 1 ATOM 4 O "O4'" . DC A 1 1 ? 14.757 -1.086 5.327 1.00 51.06 ? 1 DC A "O4'" 1 ATOM 5 C "C3'" . DC A 1 1 ? 13.635 0.930 4.762 1.00 48.03 ? 1 DC A "C3'" 1 ATOM 6 O "O3'" . DC A 1 1 ? 13.764 2.378 4.822 1.00 58.14 ? 1 DC A "O3'" 1 ATOM 7 C "C2'" . DC A 1 1 ? 14.228 0.321 3.467 1.00 38.52 ? 1 DC A "C2'" 1 ATOM 8 C "C1'" . DC A 1 1 ? 14.999 -0.921 3.920 1.00 49.97 ? 1 DC A "C1'" 1 ATOM 9 N N1 . DC A 1 1 ? 14.833 -2.230 3.095 1.00 29.93 ? 1 DC A N1 1 ATOM 10 C C2 . DC A 1 1 ? 14.859 -2.278 1.670 1.00 46.70 ? 1 DC A C2 1 ATOM 11 O O2 . DC A 1 1 ? 14.975 -1.197 1.042 1.00 51.67 ? 1 DC A O2 1 ATOM 12 N N3 . DC A 1 1 ? 14.735 -3.514 1.026 1.00 27.07 ? 1 DC A N3 1 ATOM 13 C C4 . DC A 1 1 ? 14.627 -4.673 1.749 1.00 34.56 ? 1 DC A C4 1 ATOM 14 N N4 . DC A 1 1 ? 14.515 -5.891 1.153 1.00 25.76 ? 1 DC A N4 1 ATOM 15 C C5 . DC A 1 1 ? 14.611 -4.611 3.183 1.00 31.55 ? 1 DC A C5 1 ATOM 16 C C6 . DC A 1 1 ? 14.710 -3.408 3.791 1.00 35.79 ? 1 DC A C6 1 ATOM 17 P P . DC A 1 2 ? 12.656 3.361 4.149 1.00 71.53 ? 2 DC A P 1 ATOM 18 O OP1 . DC A 1 2 ? 12.863 4.719 4.739 1.00 79.05 ? 2 DC A OP1 1 ATOM 19 O OP2 . DC A 1 2 ? 11.312 2.714 4.238 1.00 50.71 ? 2 DC A OP2 1 ATOM 20 O "O5'" . DC A 1 2 ? 13.093 3.336 2.593 1.00 47.57 ? 2 DC A "O5'" 1 ATOM 21 C "C5'" . DC A 1 2 ? 13.567 2.128 1.905 1.00 31.69 ? 2 DC A "C5'" 1 ATOM 22 C "C4'" . DC A 1 2 ? 12.591 1.497 0.861 1.00 61.42 ? 2 DC A "C4'" 1 ATOM 23 O "O4'" . DC A 1 2 ? 12.499 0.068 0.987 1.00 44.86 ? 2 DC A "O4'" 1 ATOM 24 C "C3'" . DC A 1 2 ? 11.101 1.848 0.822 1.00 55.76 ? 2 DC A "C3'" 1 ATOM 25 O "O3'" . DC A 1 2 ? 10.951 3.171 0.166 1.00 64.60 ? 2 DC A "O3'" 1 ATOM 26 C "C2'" . DC A 1 2 ? 10.483 0.605 0.137 1.00 52.33 ? 2 DC A "C2'" 1 ATOM 27 C "C1'" . DC A 1 2 ? 11.664 -0.369 -0.084 1.00 34.08 ? 2 DC A "C1'" 1 ATOM 28 N N1 . DC A 1 2 ? 11.515 -1.858 0.303 1.00 37.46 ? 2 DC A N1 1 ATOM 29 C C2 . DC A 1 2 ? 11.386 -3.096 -0.523 1.00 60.95 ? 2 DC A C2 1 ATOM 30 O O2 . DC A 1 2 ? 11.276 -3.175 -1.786 1.00 70.83 ? 2 DC A O2 1 ATOM 31 N N3 . DC A 1 2 ? 11.344 -4.347 0.129 1.00 65.33 ? 2 DC A N3 1 ATOM 32 C C4 . DC A 1 2 ? 11.449 -4.404 1.507 1.00 79.67 ? 2 DC A C4 1 ATOM 33 N N4 . DC A 1 2 ? 11.413 -5.629 2.117 1.00 66.49 ? 2 DC A N4 1 ATOM 34 C C5 . DC A 1 2 ? 11.617 -3.177 2.321 1.00 66.53 ? 2 DC A C5 1 ATOM 35 C C6 . DC A 1 2 ? 11.648 -1.963 1.688 1.00 53.03 ? 2 DC A C6 1 ATOM 36 P P . DG A 1 3 ? 10.058 3.644 -1.094 1.00 72.34 ? 3 DG A P 1 ATOM 37 O OP1 . DG A 1 3 ? 10.840 4.730 -1.775 1.00 52.17 ? 3 DG A OP1 1 ATOM 38 O OP2 . DG A 1 3 ? 8.711 4.021 -0.576 1.00 64.92 ? 3 DG A OP2 1 ATOM 39 O "O5'" . DG A 1 3 ? 9.974 2.281 -1.975 1.00 58.18 ? 3 DG A "O5'" 1 ATOM 40 C "C5'" . DG A 1 3 ? 9.961 2.246 -3.432 1.00 51.45 ? 3 DG A "C5'" 1 ATOM 41 C "C4'" . DG A 1 3 ? 8.760 1.494 -4.055 1.00 51.32 ? 3 DG A "C4'" 1 ATOM 42 O "O4'" . DG A 1 3 ? 8.742 0.051 -3.707 1.00 47.20 ? 3 DG A "O4'" 1 ATOM 43 C "C3'" . DG A 1 3 ? 7.371 2.062 -3.682 1.00 54.65 ? 3 DG A "C3'" 1 ATOM 44 O "O3'" . DG A 1 3 ? 6.420 2.555 -4.855 1.00 56.20 ? 3 DG A "O3'" 1 ATOM 45 C "C2'" . DG A 1 3 ? 6.845 1.021 -2.645 1.00 39.84 ? 3 DG A "C2'" 1 ATOM 46 C "C1'" . DG A 1 3 ? 7.587 -0.309 -2.950 1.00 39.35 ? 3 DG A "C1'" 1 ATOM 47 N N9 . DG A 1 3 ? 7.877 -1.237 -1.802 1.00 43.87 ? 3 DG A N9 1 ATOM 48 C C8 . DG A 1 3 ? 7.979 -0.889 -0.447 1.00 44.10 ? 3 DG A C8 1 ATOM 49 N N7 . DG A 1 3 ? 8.237 -1.890 0.410 1.00 20.19 ? 3 DG A N7 1 ATOM 50 C C5 . DG A 1 3 ? 8.302 -3.034 -0.447 1.00 16.83 ? 3 DG A C5 1 ATOM 51 C C6 . DG A 1 3 ? 8.540 -4.437 -0.140 1.00 21.35 ? 3 DG A C6 1 ATOM 52 O O6 . DG A 1 3 ? 8.762 -5.072 0.933 1.00 17.79 ? 3 DG A O6 1 ATOM 53 N N1 . DG A 1 3 ? 8.514 -5.274 -1.255 1.00 9.56 ? 3 DG A N1 1 ATOM 54 C C2 . DG A 1 3 ? 8.292 -4.828 -2.537 1.00 35.84 ? 3 DG A C2 1 ATOM 55 N N2 . DG A 1 3 ? 8.336 -5.866 -3.413 1.00 27.51 ? 3 DG A N2 1 ATOM 56 N N3 . DG A 1 3 ? 8.064 -3.512 -2.875 1.00 25.92 ? 3 DG A N3 1 ATOM 57 C C4 . DG A 1 3 ? 8.079 -2.651 -1.791 1.00 25.25 ? 3 DG A C4 1 ATOM 58 P P . DG A 1 4 ? 6.546 2.522 -6.513 1.00 69.35 ? 4 DG A P 1 ATOM 59 O OP1 . DG A 1 4 ? 7.967 2.184 -6.836 1.00 48.74 ? 4 DG A OP1 1 ATOM 60 O OP2 . DG A 1 4 ? 5.928 3.810 -6.954 1.00 40.34 ? 4 DG A OP2 1 ATOM 61 O "O5'" . DG A 1 4 ? 5.659 1.297 -7.146 1.00 46.73 ? 4 DG A "O5'" 1 ATOM 62 C "C5'" . DG A 1 4 ? 6.335 0.085 -7.540 1.00 25.48 ? 4 DG A "C5'" 1 ATOM 63 C "C4'" . DG A 1 4 ? 5.486 -1.205 -7.749 1.00 33.64 ? 4 DG A "C4'" 1 ATOM 64 O "O4'" . DG A 1 4 ? 5.815 -2.109 -6.639 1.00 44.46 ? 4 DG A "O4'" 1 ATOM 65 C "C3'" . DG A 1 4 ? 3.955 -1.164 -7.733 1.00 39.25 ? 4 DG A "C3'" 1 ATOM 66 O "O3'" . DG A 1 4 ? 3.302 -2.343 -8.344 1.00 40.75 ? 4 DG A "O3'" 1 ATOM 67 C "C2'" . DG A 1 4 ? 3.719 -1.219 -6.238 1.00 27.00 ? 4 DG A "C2'" 1 ATOM 68 C "C1'" . DG A 1 4 ? 4.632 -2.411 -5.893 1.00 47.94 ? 4 DG A "C1'" 1 ATOM 69 N N9 . DG A 1 4 ? 4.814 -2.623 -4.429 1.00 59.59 ? 4 DG A N9 1 ATOM 70 C C8 . DG A 1 4 ? 4.874 -1.568 -3.535 1.00 62.81 ? 4 DG A C8 1 ATOM 71 N N7 . DG A 1 4 ? 5.023 -1.910 -2.275 1.00 39.26 ? 4 DG A N7 1 ATOM 72 C C5 . DG A 1 4 ? 5.047 -3.301 -2.319 1.00 14.95 ? 4 DG A C5 1 ATOM 73 C C6 . DG A 1 4 ? 5.195 -4.173 -1.204 1.00 39.05 ? 4 DG A C6 1 ATOM 74 O O6 . DG A 1 4 ? 5.335 -3.873 0.004 1.00 45.17 ? 4 DG A O6 1 ATOM 75 N N1 . DG A 1 4 ? 5.170 -5.515 -1.556 1.00 37.12 ? 4 DG A N1 1 ATOM 76 C C2 . DG A 1 4 ? 5.042 -5.923 -2.849 1.00 37.03 ? 4 DG A C2 1 ATOM 77 N N2 . DG A 1 4 ? 5.072 -7.258 -2.848 1.00 29.87 ? 4 DG A N2 1 ATOM 78 N N3 . DG A 1 4 ? 4.916 -5.130 -3.941 1.00 32.92 ? 4 DG A N3 1 ATOM 79 C C4 . DG A 1 4 ? 4.915 -3.790 -3.610 1.00 34.16 ? 4 DG A C4 1 ATOM 80 P P . DT A 1 5 ? 3.145 -2.498 -9.990 1.00 76.77 ? 5 DT A P 1 ATOM 81 O OP1 . DT A 1 5 ? 4.409 -2.107 -10.663 1.00 68.76 ? 5 DT A OP1 1 ATOM 82 O OP2 . DT A 1 5 ? 1.909 -1.839 -10.518 1.00 32.92 ? 5 DT A OP2 1 ATOM 83 O "O5'" . DT A 1 5 ? 3.078 -4.096 -10.114 1.00 61.78 ? 5 DT A "O5'" 1 ATOM 84 C "C5'" . DT A 1 5 ? 4.147 -4.847 -9.490 1.00 43.69 ? 5 DT A "C5'" 1 ATOM 85 C "C4'" . DT A 1 5 ? 3.511 -5.897 -8.510 1.00 41.52 ? 5 DT A "C4'" 1 ATOM 86 O "O4'" . DT A 1 5 ? 3.468 -5.291 -7.198 1.00 59.01 ? 5 DT A "O4'" 1 ATOM 87 C "C3'" . DT A 1 5 ? 2.057 -6.263 -8.765 1.00 40.35 ? 5 DT A "C3'" 1 ATOM 88 O "O3'" . DT A 1 5 ? 1.661 -7.485 -8.067 1.00 41.32 ? 5 DT A "O3'" 1 ATOM 89 C "C2'" . DT A 1 5 ? 1.367 -5.069 -8.104 1.00 47.38 ? 5 DT A "C2'" 1 ATOM 90 C "C1'" . DT A 1 5 ? 2.111 -5.327 -6.797 1.00 64.85 ? 5 DT A "C1'" 1 ATOM 91 N N1 . DT A 1 5 ? 1.915 -4.563 -5.511 1.00 57.20 ? 5 DT A N1 1 ATOM 92 C C2 . DT A 1 5 ? 2.104 -5.373 -4.399 1.00 73.24 ? 5 DT A C2 1 ATOM 93 O O2 . DT A 1 5 ? 2.387 -6.571 -4.526 1.00 81.30 ? 5 DT A O2 1 ATOM 94 N N3 . DT A 1 5 ? 1.951 -4.783 -3.152 1.00 55.39 ? 5 DT A N3 1 ATOM 95 C C4 . DT A 1 5 ? 1.621 -3.445 -2.964 1.00 59.09 ? 5 DT A C4 1 ATOM 96 O O4 . DT A 1 5 ? 1.494 -3.000 -1.820 1.00 68.67 ? 5 DT A O4 1 ATOM 97 C C5 . DT A 1 5 ? 1.446 -2.648 -4.181 1.00 53.72 ? 5 DT A C5 1 ATOM 98 C C7 . DT A 1 5 ? 1.095 -1.182 -4.056 1.00 62.77 ? 5 DT A C7 1 ATOM 99 C C6 . DT A 1 5 ? 1.587 -3.228 -5.401 1.00 45.98 ? 5 DT A C6 1 ATOM 100 P P . DA A 1 6 ? 0.336 -8.260 -8.692 1.00 68.29 ? 6 DA A P 1 ATOM 101 O OP1 . DA A 1 6 ? 0.858 -8.892 -9.961 1.00 41.14 ? 6 DA A OP1 1 ATOM 102 O OP2 . DA A 1 6 ? -0.778 -7.277 -8.873 1.00 64.92 ? 6 DA A OP2 1 ATOM 103 O "O5'" . DA A 1 6 ? -0.217 -9.331 -7.607 1.00 35.81 ? 6 DA A "O5'" 1 ATOM 104 C "C5'" . DA A 1 6 ? 0.683 -9.960 -6.707 1.00 41.48 ? 6 DA A "C5'" 1 ATOM 105 C "C4'" . DA A 1 6 ? -0.052 -10.473 -5.462 1.00 47.89 ? 6 DA A "C4'" 1 ATOM 106 O "O4'" . DA A 1 6 ? -0.244 -9.468 -4.408 1.00 48.42 ? 6 DA A "O4'" 1 ATOM 107 C "C3'" . DA A 1 6 ? -1.466 -10.940 -5.759 1.00 49.28 ? 6 DA A "C3'" 1 ATOM 108 O "O3'" . DA A 1 6 ? -1.744 -12.078 -4.903 1.00 50.12 ? 6 DA A "O3'" 1 ATOM 109 C "C2'" . DA A 1 6 ? -2.292 -9.678 -5.399 1.00 38.56 ? 6 DA A "C2'" 1 ATOM 110 C "C1'" . DA A 1 6 ? -1.623 -9.388 -4.082 1.00 41.81 ? 6 DA A "C1'" 1 ATOM 111 N N9 . DA A 1 6 ? -1.706 -7.979 -3.699 1.00 37.01 ? 6 DA A N9 1 ATOM 112 C C8 . DA A 1 6 ? -1.769 -6.866 -4.468 1.00 54.33 ? 6 DA A C8 1 ATOM 113 N N7 . DA A 1 6 ? -1.785 -5.751 -3.750 1.00 41.66 ? 6 DA A N7 1 ATOM 114 C C5 . DA A 1 6 ? -1.716 -6.158 -2.430 1.00 14.25 ? 6 DA A C5 1 ATOM 115 C C6 . DA A 1 6 ? -1.691 -5.450 -1.171 1.00 15.44 ? 6 DA A C6 1 ATOM 116 N N6 . DA A 1 6 ? -1.738 -4.095 -0.988 1.00 10.62 ? 6 DA A N6 1 ATOM 117 N N1 . DA A 1 6 ? -1.618 -6.212 -0.030 1.00 23.64 ? 6 DA A N1 1 ATOM 118 C C2 . DA A 1 6 ? -1.566 -7.573 -0.155 1.00 28.99 ? 6 DA A C2 1 ATOM 119 N N3 . DA A 1 6 ? -1.568 -8.319 -1.287 1.00 29.27 ? 6 DA A N3 1 ATOM 120 C C4 . DA A 1 6 ? -1.647 -7.545 -2.391 1.00 24.30 ? 6 DA A C4 1 ATOM 121 P P . DC A 1 7 ? -3.314 -12.315 -4.669 1.00 51.51 ? 7 DC A P 1 ATOM 122 O OP1 . DC A 1 7 ? -3.811 -12.821 -5.990 1.00 34.51 ? 7 DC A OP1 1 ATOM 123 O OP2 . DC A 1 7 ? -3.849 -11.061 -3.982 1.00 45.88 ? 7 DC A OP2 1 ATOM 124 O "O5'" . DC A 1 7 ? -3.474 -13.427 -3.544 1.00 52.71 ? 7 DC A "O5'" 1 ATOM 125 C "C5'" . DC A 1 7 ? -3.153 -13.022 -2.210 1.00 53.28 ? 7 DC A "C5'" 1 ATOM 126 C "C4'" . DC A 1 7 ? -4.251 -12.345 -1.378 1.00 58.07 ? 7 DC A "C4'" 1 ATOM 127 O "O4'" . DC A 1 7 ? -3.833 -11.006 -0.969 1.00 68.36 ? 7 DC A "O4'" 1 ATOM 128 C "C3'" . DC A 1 7 ? -5.645 -12.063 -1.955 1.00 58.21 ? 7 DC A "C3'" 1 ATOM 129 O "O3'" . DC A 1 7 ? -6.513 -13.239 -2.063 1.00 53.78 ? 7 DC A "O3'" 1 ATOM 130 C "C2'" . DC A 1 7 ? -6.168 -11.054 -0.913 1.00 53.43 ? 7 DC A "C2'" 1 ATOM 131 C "C1'" . DC A 1 7 ? -4.938 -10.347 -0.352 1.00 44.92 ? 7 DC A "C1'" 1 ATOM 132 N N1 . DC A 1 7 ? -4.886 -8.823 -0.684 1.00 24.45 ? 7 DC A N1 1 ATOM 133 C C2 . DC A 1 7 ? -4.950 -7.852 0.374 1.00 24.05 ? 7 DC A C2 1 ATOM 134 O O2 . DC A 1 7 ? -5.000 -8.209 1.562 1.00 22.51 ? 7 DC A O2 1 ATOM 135 N N3 . DC A 1 7 ? -4.910 -6.505 0.098 1.00 12.88 ? 7 DC A N3 1 ATOM 136 C C4 . DC A 1 7 ? -4.819 -6.154 -1.203 1.00 38.09 ? 7 DC A C4 1 ATOM 137 N N4 . DC A 1 7 ? -4.770 -4.839 -1.479 1.00 14.52 ? 7 DC A N4 1 ATOM 138 C C5 . DC A 1 7 ? -4.737 -7.116 -2.283 1.00 49.22 ? 7 DC A C5 1 ATOM 139 C C6 . DC A 1 7 ? -4.764 -8.427 -1.993 1.00 37.83 ? 7 DC A C6 1 ATOM 140 P P . DC A 1 8 ? -6.569 -14.565 -1.130 1.00 76.76 ? 8 DC A P 1 ATOM 141 O OP1 . DC A 1 8 ? -5.590 -15.489 -1.788 1.00 61.42 ? 8 DC A OP1 1 ATOM 142 O OP2 . DC A 1 8 ? -7.999 -14.996 -1.059 1.00 80.16 ? 8 DC A OP2 1 ATOM 143 O "O5'" . DC A 1 8 ? -6.170 -14.180 0.407 1.00 51.65 ? 8 DC A "O5'" 1 ATOM 144 C "C5'" . DC A 1 8 ? -6.426 -12.857 0.954 1.00 52.85 ? 8 DC A "C5'" 1 ATOM 145 C "C4'" . DC A 1 8 ? -6.892 -12.669 2.402 1.00 70.27 ? 8 DC A "C4'" 1 ATOM 146 O "O4'" . DC A 1 8 ? -6.997 -11.244 2.790 1.00 56.86 ? 8 DC A "O4'" 1 ATOM 147 C "C3'" . DC A 1 8 ? -8.318 -13.095 2.636 1.00 65.75 ? 8 DC A "C3'" 1 ATOM 148 O "O3'" . DC A 1 8 ? -8.469 -12.979 4.045 1.00 68.74 ? 8 DC A "O3'" 1 ATOM 149 C "C2'" . DC A 1 8 ? -9.092 -11.926 2.037 1.00 63.59 ? 8 DC A "C2'" 1 ATOM 150 C "C1'" . DC A 1 8 ? -8.333 -10.740 2.656 1.00 55.29 ? 8 DC A "C1'" 1 ATOM 151 N N1 . DC A 1 8 ? -8.370 -9.510 1.765 1.00 42.29 ? 8 DC A N1 1 ATOM 152 C C2 . DC A 1 8 ? -8.488 -8.157 2.208 1.00 42.94 ? 8 DC A C2 1 ATOM 153 O O2 . DC A 1 8 ? -8.583 -7.888 3.425 1.00 47.16 ? 8 DC A O2 1 ATOM 154 N N3 . DC A 1 8 ? -8.495 -7.153 1.264 1.00 29.69 ? 8 DC A N3 1 ATOM 155 C C4 . DC A 1 8 ? -8.424 -7.474 -0.042 1.00 27.33 ? 8 DC A C4 1 ATOM 156 N N4 . DC A 1 8 ? -8.427 -6.500 -0.953 1.00 40.23 ? 8 DC A N4 1 ATOM 157 C C5 . DC A 1 8 ? -8.308 -8.815 -0.493 1.00 22.68 ? 8 DC A C5 1 ATOM 158 C C6 . DC A 1 8 ? -8.284 -9.773 0.430 1.00 29.88 ? 8 DC A C6 1 ATOM 159 P P . DG A 1 9 ? -9.945 -13.244 4.594 1.00 68.37 ? 9 DG A P 1 ATOM 160 O OP1 . DG A 1 9 ? -10.026 -14.720 4.762 1.00 90.19 ? 9 DG A OP1 1 ATOM 161 O OP2 . DG A 1 9 ? -10.997 -12.601 3.715 1.00 50.73 ? 9 DG A OP2 1 ATOM 162 O "O5'" . DG A 1 9 ? -9.737 -12.580 6.039 1.00 43.90 ? 9 DG A "O5'" 1 ATOM 163 C "C5'" . DG A 1 9 ? -10.799 -12.462 6.883 1.00 36.06 ? 9 DG A "C5'" 1 ATOM 164 C "C4'" . DG A 1 9 ? -11.689 -11.288 6.464 1.00 52.79 ? 9 DG A "C4'" 1 ATOM 165 O "O4'" . DG A 1 9 ? -11.221 -10.320 5.433 1.00 52.22 ? 9 DG A "O4'" 1 ATOM 166 C "C3'" . DG A 1 9 ? -13.024 -11.861 5.980 1.00 56.82 ? 9 DG A "C3'" 1 ATOM 167 O "O3'" . DG A 1 9 ? -13.967 -11.475 6.934 1.00 59.44 ? 9 DG A "O3'" 1 ATOM 168 C "C2'" . DG A 1 9 ? -13.247 -11.169 4.642 1.00 58.14 ? 9 DG A "C2'" 1 ATOM 169 C "C1'" . DG A 1 9 ? -12.424 -9.889 4.803 1.00 41.97 ? 9 DG A "C1'" 1 ATOM 170 N N9 . DG A 1 9 ? -12.307 -9.287 3.483 1.00 46.09 ? 9 DG A N9 1 ATOM 171 C C8 . DG A 1 9 ? -12.380 -9.990 2.292 1.00 20.80 ? 9 DG A C8 1 ATOM 172 N N7 . DG A 1 9 ? -12.268 -9.194 1.249 1.00 23.54 ? 9 DG A N7 1 ATOM 173 C C5 . DG A 1 9 ? -12.136 -7.916 1.829 1.00 25.41 ? 9 DG A C5 1 ATOM 174 C C6 . DG A 1 9 ? -11.974 -6.670 1.175 1.00 29.87 ? 9 DG A C6 1 ATOM 175 O O6 . DG A 1 9 ? -11.919 -6.451 -0.067 1.00 37.07 ? 9 DG A O6 1 ATOM 176 N N1 . DG A 1 9 ? -11.867 -5.616 2.093 1.00 11.16 ? 9 DG A N1 1 ATOM 177 C C2 . DG A 1 9 ? -11.910 -5.710 3.464 1.00 27.18 ? 9 DG A C2 1 ATOM 178 N N2 . DG A 1 9 ? -11.801 -4.490 4.043 1.00 25.84 ? 9 DG A N2 1 ATOM 179 N N3 . DG A 1 9 ? -12.056 -6.886 4.121 1.00 19.71 ? 9 DG A N3 1 ATOM 180 C C4 . DG A 1 9 ? -12.156 -7.935 3.216 1.00 29.60 ? 9 DG A C4 1 ATOM 181 P P . DG A 1 10 ? -14.527 -9.945 6.953 1.00 73.15 ? 10 DG A P 1 ATOM 182 O OP1 . DG A 1 10 ? -15.013 -9.725 8.376 1.00 52.70 ? 10 DG A OP1 1 ATOM 183 O OP2 . DG A 1 10 ? -15.525 -9.943 5.813 1.00 60.83 ? 10 DG A OP2 1 ATOM 184 O "O5'" . DG A 1 10 ? -13.311 -8.877 6.582 1.00 38.89 ? 10 DG A "O5'" 1 ATOM 185 C "C5'" . DG A 1 10 ? -12.781 -7.936 7.562 1.00 62.20 ? 10 DG A "C5'" 1 ATOM 186 C "C4'" . DG A 1 10 ? -13.697 -6.734 7.852 1.00 62.02 ? 10 DG A "C4'" 1 ATOM 187 O "O4'" . DG A 1 10 ? -13.616 -5.824 6.713 1.00 70.65 ? 10 DG A "O4'" 1 ATOM 188 C "C3'" . DG A 1 10 ? -15.206 -7.035 8.102 1.00 38.97 ? 10 DG A "C3'" 1 ATOM 189 O "O3'" . DG A 1 10 ? -15.511 -7.132 9.531 1.00 47.84 ? 10 DG A "O3'" 1 ATOM 190 C "C2'" . DG A 1 10 ? -15.943 -5.911 7.334 1.00 31.72 ? 10 DG A "C2'" 1 ATOM 191 C "C1'" . DG A 1 10 ? -14.931 -5.547 6.240 1.00 46.10 ? 10 DG A "C1'" 1 ATOM 192 N N9 . DG A 1 10 ? -15.024 -6.301 4.994 1.00 42.80 ? 10 DG A N9 1 ATOM 193 C C8 . DG A 1 10 ? -15.085 -7.661 4.772 1.00 51.17 ? 10 DG A C8 1 ATOM 194 N N7 . DG A 1 10 ? -15.145 -8.025 3.502 1.00 39.79 ? 10 DG A N7 1 ATOM 195 C C5 . DG A 1 10 ? -15.101 -6.812 2.830 1.00 25.07 ? 10 DG A C5 1 ATOM 196 C C6 . DG A 1 10 ? -15.122 -6.521 1.441 1.00 31.23 ? 10 DG A C6 1 ATOM 197 O O6 . DG A 1 10 ? -15.194 -7.302 0.492 1.00 34.82 ? 10 DG A O6 1 ATOM 198 N N1 . DG A 1 10 ? -15.074 -5.156 1.173 1.00 41.01 ? 10 DG A N1 1 ATOM 199 C C2 . DG A 1 10 ? -15.001 -4.174 2.172 1.00 36.87 ? 10 DG A C2 1 ATOM 200 N N2 . DG A 1 10 ? -14.962 -2.888 1.762 1.00 21.92 ? 10 DG A N2 1 ATOM 201 N N3 . DG A 1 10 ? -14.965 -4.426 3.489 1.00 29.51 ? 10 DG A N3 1 ATOM 202 C C4 . DG A 1 10 ? -15.027 -5.752 3.737 1.00 33.94 ? 10 DG A C4 1 ATOM 203 O "O5'" . DC B 1 1 ? -17.371 -1.685 -6.834 1.00 76.01 ? 1 DC B "O5'" 1 ATOM 204 C "C5'" . DC B 1 1 ? -17.081 -1.857 -5.409 1.00 55.80 ? 1 DC B "C5'" 1 ATOM 205 C "C4'" . DC B 1 1 ? -16.367 -0.684 -4.722 1.00 63.53 ? 1 DC B "C4'" 1 ATOM 206 O "O4'" . DC B 1 1 ? -15.869 -0.992 -3.382 1.00 57.96 ? 1 DC B "O4'" 1 ATOM 207 C "C3'" . DC B 1 1 ? -15.120 -0.117 -5.394 1.00 39.38 ? 1 DC B "C3'" 1 ATOM 208 O "O3'" . DC B 1 1 ? -15.011 1.244 -4.939 1.00 40.56 ? 1 DC B "O3'" 1 ATOM 209 C "C2'" . DC B 1 1 ? -14.002 -1.011 -4.860 1.00 24.10 ? 1 DC B "C2'" 1 ATOM 210 C "C1'" . DC B 1 1 ? -14.461 -1.266 -3.429 1.00 36.37 ? 1 DC B "C1'" 1 ATOM 211 N N1 . DC B 1 1 ? -14.399 -2.691 -2.988 1.00 21.94 ? 1 DC B N1 1 ATOM 212 C C2 . DC B 1 1 ? -14.581 -2.968 -1.609 1.00 35.22 ? 1 DC B C2 1 ATOM 213 O O2 . DC B 1 1 ? -14.729 -1.989 -0.858 1.00 39.83 ? 1 DC B O2 1 ATOM 214 N N3 . DC B 1 1 ? -14.613 -4.271 -1.134 1.00 26.63 ? 1 DC B N3 1 ATOM 215 C C4 . DC B 1 1 ? -14.463 -5.285 -2.003 1.00 27.92 ? 1 DC B C4 1 ATOM 216 N N4 . DC B 1 1 ? -14.484 -6.528 -1.492 1.00 43.17 ? 1 DC B N4 1 ATOM 217 C C5 . DC B 1 1 ? -14.282 -5.038 -3.418 1.00 27.04 ? 1 DC B C5 1 ATOM 218 C C6 . DC B 1 1 ? -14.271 -3.746 -3.864 1.00 30.74 ? 1 DC B C6 1 ATOM 219 P P . DC B 1 2 ? -13.568 1.927 -4.747 1.00 66.57 ? 2 DC B P 1 ATOM 220 O OP1 . DC B 1 2 ? -13.728 3.407 -4.548 1.00 64.56 ? 2 DC B OP1 1 ATOM 221 O OP2 . DC B 1 2 ? -12.740 1.497 -5.907 1.00 50.71 ? 2 DC B OP2 1 ATOM 222 O "O5'" . DC B 1 2 ? -13.055 1.173 -3.401 1.00 49.77 ? 2 DC B "O5'" 1 ATOM 223 C "C5'" . DC B 1 2 ? -13.517 1.468 -2.058 1.00 48.33 ? 2 DC B "C5'" 1 ATOM 224 C "C4'" . DC B 1 2 ? -12.499 2.246 -1.197 1.00 46.24 ? 2 DC B "C4'" 1 ATOM 225 O "O4'" . DC B 1 2 ? -12.168 1.574 0.055 1.00 50.33 ? 2 DC B "O4'" 1 ATOM 226 C "C3'" . DC B 1 2 ? -11.150 2.582 -1.812 1.00 41.64 ? 2 DC B "C3'" 1 ATOM 227 O "O3'" . DC B 1 2 ? -10.766 3.831 -1.243 1.00 43.91 ? 2 DC B "O3'" 1 ATOM 228 C "C2'" . DC B 1 2 ? -10.246 1.456 -1.307 1.00 44.24 ? 2 DC B "C2'" 1 ATOM 229 C "C1'" . DC B 1 2 ? -10.904 0.955 0.004 1.00 36.99 ? 2 DC B "C1'" 1 ATOM 230 N N1 . DC B 1 2 ? -11.024 -0.498 -0.163 1.00 33.34 ? 2 DC B N1 1 ATOM 231 C C2 . DC B 1 2 ? -11.124 -1.505 0.845 1.00 37.17 ? 2 DC B C2 1 ATOM 232 O O2 . DC B 1 2 ? -11.175 -1.254 2.108 1.00 51.95 ? 2 DC B O2 1 ATOM 233 N N3 . DC B 1 2 ? -11.197 -2.797 0.401 1.00 40.21 ? 2 DC B N3 1 ATOM 234 C C4 . DC B 1 2 ? -11.160 -3.065 -0.923 1.00 48.42 ? 2 DC B C4 1 ATOM 235 N N4 . DC B 1 2 ? -11.238 -4.368 -1.241 1.00 56.54 ? 2 DC B N4 1 ATOM 236 C C5 . DC B 1 2 ? -11.050 -2.059 -1.937 1.00 49.65 ? 2 DC B C5 1 ATOM 237 C C6 . DC B 1 2 ? -10.983 -0.811 -1.515 1.00 31.88 ? 2 DC B C6 1 ATOM 238 P P . DG B 1 3 ? -9.473 3.950 -0.273 1.00 58.76 ? 3 DG B P 1 ATOM 239 O OP1 . DG B 1 3 ? -9.268 5.398 -0.034 1.00 58.08 ? 3 DG B OP1 1 ATOM 240 O OP2 . DG B 1 3 ? -8.304 3.234 -0.844 1.00 75.75 ? 3 DG B OP2 1 ATOM 241 O "O5'" . DG B 1 3 ? -9.882 3.182 1.093 1.00 56.78 ? 3 DG B "O5'" 1 ATOM 242 C "C5'" . DG B 1 3 ? -9.261 3.591 2.341 1.00 65.33 ? 3 DG B "C5'" 1 ATOM 243 C "C4'" . DG B 1 3 ? -8.861 2.511 3.357 1.00 70.38 ? 3 DG B "C4'" 1 ATOM 244 O "O4'" . DG B 1 3 ? -8.973 1.146 2.830 1.00 46.60 ? 3 DG B "O4'" 1 ATOM 245 C "C3'" . DG B 1 3 ? -7.429 2.676 3.892 1.00 62.20 ? 3 DG B "C3'" 1 ATOM 246 O "O3'" . DG B 1 3 ? -7.308 2.499 5.389 1.00 62.55 ? 3 DG B "O3'" 1 ATOM 247 C "C2'" . DG B 1 3 ? -6.749 1.621 3.000 1.00 54.60 ? 3 DG B "C2'" 1 ATOM 248 C "C1'" . DG B 1 3 ? -7.760 0.463 3.025 1.00 33.57 ? 3 DG B "C1'" 1 ATOM 249 N N9 . DG B 1 3 ? -7.736 -0.492 1.928 1.00 33.79 ? 3 DG B N9 1 ATOM 250 C C8 . DG B 1 3 ? -7.685 -0.176 0.583 1.00 34.12 ? 3 DG B C8 1 ATOM 251 N N7 . DG B 1 3 ? -7.721 -1.238 -0.201 1.00 39.88 ? 3 DG B N7 1 ATOM 252 C C5 . DG B 1 3 ? -7.808 -2.329 0.687 1.00 42.40 ? 3 DG B C5 1 ATOM 253 C C6 . DG B 1 3 ? -7.859 -3.751 0.430 1.00 56.90 ? 3 DG B C6 1 ATOM 254 O O6 . DG B 1 3 ? -7.843 -4.291 -0.691 1.00 56.61 ? 3 DG B O6 1 ATOM 255 N N1 . DG B 1 3 ? -7.940 -4.567 1.607 1.00 27.60 ? 3 DG B N1 1 ATOM 256 C C2 . DG B 1 3 ? -7.929 -4.021 2.903 1.00 31.35 ? 3 DG B C2 1 ATOM 257 N N2 . DG B 1 3 ? -8.007 -4.905 3.920 1.00 36.64 ? 3 DG B N2 1 ATOM 258 N N3 . DG B 1 3 ? -7.887 -2.688 3.137 1.00 25.99 ? 3 DG B N3 1 ATOM 259 C C4 . DG B 1 3 ? -7.820 -1.887 2.010 1.00 24.26 ? 3 DG B C4 1 ATOM 260 P P . DG B 1 4 ? -6.014 2.819 6.346 1.00 67.24 ? 4 DG B P 1 ATOM 261 O OP1 . DG B 1 4 ? -6.380 3.746 7.451 1.00 53.29 ? 4 DG B OP1 1 ATOM 262 O OP2 . DG B 1 4 ? -4.885 3.141 5.428 1.00 68.06 ? 4 DG B OP2 1 ATOM 263 O "O5'" . DG B 1 4 ? -5.693 1.419 7.078 1.00 45.87 ? 4 DG B "O5'" 1 ATOM 264 C "C5'" . DG B 1 4 ? -6.789 0.479 6.944 1.00 44.53 ? 4 DG B "C5'" 1 ATOM 265 C "C4'" . DG B 1 4 ? -6.274 -0.866 7.451 1.00 37.30 ? 4 DG B "C4'" 1 ATOM 266 O "O4'" . DG B 1 4 ? -6.183 -1.785 6.303 1.00 43.51 ? 4 DG B "O4'" 1 ATOM 267 C "C3'" . DG B 1 4 ? -4.879 -0.647 7.937 1.00 36.37 ? 4 DG B "C3'" 1 ATOM 268 O "O3'" . DG B 1 4 ? -4.582 -1.747 8.773 1.00 43.64 ? 4 DG B "O3'" 1 ATOM 269 C "C2'" . DG B 1 4 ? -4.116 -0.682 6.601 1.00 32.44 ? 4 DG B "C2'" 1 ATOM 270 C "C1'" . DG B 1 4 ? -4.799 -1.855 5.894 1.00 46.88 ? 4 DG B "C1'" 1 ATOM 271 N N9 . DG B 1 4 ? -4.821 -1.839 4.413 1.00 50.15 ? 4 DG B N9 1 ATOM 272 C C8 . DG B 1 4 ? -4.865 -0.729 3.591 1.00 51.64 ? 4 DG B C8 1 ATOM 273 N N7 . DG B 1 4 ? -4.897 -1.010 2.305 1.00 31.78 ? 4 DG B N7 1 ATOM 274 C C5 . DG B 1 4 ? -4.865 -2.391 2.286 1.00 16.86 ? 4 DG B C5 1 ATOM 275 C C6 . DG B 1 4 ? -4.874 -3.240 1.165 1.00 28.04 ? 4 DG B C6 1 ATOM 276 O O6 . DG B 1 4 ? -4.927 -2.846 -0.039 1.00 33.77 ? 4 DG B O6 1 ATOM 277 N N1 . DG B 1 4 ? -4.820 -4.595 1.530 1.00 12.42 ? 4 DG B N1 1 ATOM 278 C C2 . DG B 1 4 ? -4.776 -5.020 2.864 1.00 20.18 ? 4 DG B C2 1 ATOM 279 N N2 . DG B 1 4 ? -4.723 -6.383 2.962 1.00 14.01 ? 4 DG B N2 1 ATOM 280 N N3 . DG B 1 4 ? -4.779 -4.221 3.946 1.00 11.00 ? 4 DG B N3 1 ATOM 281 C C4 . DG B 1 4 ? -4.819 -2.922 3.541 1.00 8.08 ? 4 DG B C4 1 ATOM 282 P P . DT B 1 5 ? -3.010 -1.862 9.115 1.00 56.02 ? 5 DT B P 1 ATOM 283 O OP1 . DT B 1 5 ? -2.860 -2.116 10.572 1.00 40.56 ? 5 DT B OP1 1 ATOM 284 O OP2 . DT B 1 5 ? -2.370 -0.603 8.588 1.00 31.18 ? 5 DT B OP2 1 ATOM 285 O "O5'" . DT B 1 5 ? -2.657 -3.193 8.251 1.00 31.92 ? 5 DT B "O5'" 1 ATOM 286 C "C5'" . DT B 1 5 ? -2.876 -4.477 8.899 1.00 26.94 ? 5 DT B "C5'" 1 ATOM 287 C "C4'" . DT B 1 5 ? -3.073 -5.583 7.884 1.00 27.68 ? 5 DT B "C4'" 1 ATOM 288 O "O4'" . DT B 1 5 ? -2.604 -4.983 6.677 1.00 48.47 ? 5 DT B "O4'" 1 ATOM 289 C "C3'" . DT B 1 5 ? -2.077 -6.719 7.886 1.00 28.68 ? 5 DT B "C3'" 1 ATOM 290 O "O3'" . DT B 1 5 ? -1.885 -7.772 8.728 1.00 33.17 ? 5 DT B "O3'" 1 ATOM 291 C "C2'" . DT B 1 5 ? -1.904 -7.244 6.440 1.00 39.72 ? 5 DT B "C2'" 1 ATOM 292 C "C1'" . DT B 1 5 ? -2.564 -6.063 5.751 1.00 49.67 ? 5 DT B "C1'" 1 ATOM 293 N N1 . DT B 1 5 ? -2.054 -5.527 4.486 1.00 32.23 ? 5 DT B N1 1 ATOM 294 C C2 . DT B 1 5 ? -1.741 -6.292 3.378 1.00 30.17 ? 5 DT B C2 1 ATOM 295 O O2 . DT B 1 5 ? -1.739 -7.508 3.332 1.00 33.32 ? 5 DT B O2 1 ATOM 296 N N3 . DT B 1 5 ? -1.380 -5.528 2.293 1.00 21.39 ? 5 DT B N3 1 ATOM 297 C C4 . DT B 1 5 ? -1.324 -4.128 2.271 1.00 28.08 ? 5 DT B C4 1 ATOM 298 O O4 . DT B 1 5 ? -0.981 -3.510 1.265 1.00 28.42 ? 5 DT B O4 1 ATOM 299 C C5 . DT B 1 5 ? -1.673 -3.415 3.470 1.00 19.99 ? 5 DT B C5 1 ATOM 300 C C7 . DT B 1 5 ? -1.608 -1.915 3.536 1.00 26.42 ? 5 DT B C7 1 ATOM 301 C C6 . DT B 1 5 ? -2.023 -4.156 4.493 1.00 24.71 ? 5 DT B C6 1 ATOM 302 P P . DA B 1 6 ? -0.548 -7.929 9.113 1.00 59.97 ? 6 DA B P 1 ATOM 303 O OP1 . DA B 1 6 ? -0.516 -8.421 10.512 1.00 49.25 ? 6 DA B OP1 1 ATOM 304 O OP2 . DA B 1 6 ? 0.107 -6.604 8.912 1.00 47.70 ? 6 DA B OP2 1 ATOM 305 O "O5'" . DA B 1 6 ? -0.080 -8.776 8.059 1.00 44.23 ? 6 DA B "O5'" 1 ATOM 306 C "C5'" . DA B 1 6 ? -0.354 -10.122 7.772 1.00 36.00 ? 6 DA B "C5'" 1 ATOM 307 C "C4'" . DA B 1 6 ? 0.172 -10.372 6.377 1.00 30.70 ? 6 DA B "C4'" 1 ATOM 308 O "O4'" . DA B 1 6 ? 0.246 -9.147 5.606 1.00 41.09 ? 6 DA B "O4'" 1 ATOM 309 C "C3'" . DA B 1 6 ? 1.608 -10.801 6.384 1.00 34.74 ? 6 DA B "C3'" 1 ATOM 310 O "O3'" . DA B 1 6 ? 1.616 -12.210 6.749 1.00 44.92 ? 6 DA B "O3'" 1 ATOM 311 C "C2'" . DA B 1 6 ? 2.082 -10.343 4.965 1.00 44.69 ? 6 DA B "C2'" 1 ATOM 312 C "C1'" . DA B 1 6 ? 0.950 -9.471 4.424 1.00 31.73 ? 6 DA B "C1'" 1 ATOM 313 N N9 . DA B 1 6 ? 1.212 -8.177 3.774 1.00 35.53 ? 6 DA B N9 1 ATOM 314 C C8 . DA B 1 6 ? 1.118 -6.957 4.411 1.00 30.56 ? 6 DA B C8 1 ATOM 315 N N7 . DA B 1 6 ? 1.343 -5.922 3.625 1.00 33.75 ? 6 DA B N7 1 ATOM 316 C C5 . DA B 1 6 ? 1.602 -6.474 2.360 1.00 26.43 ? 6 DA B C5 1 ATOM 317 C C6 . DA B 1 6 ? 1.906 -5.879 1.098 1.00 15.81 ? 6 DA B C6 1 ATOM 318 N N6 . DA B 1 6 ? 2.020 -4.553 0.854 1.00 39.86 ? 6 DA B N6 1 ATOM 319 N N1 . DA B 1 6 ? 2.094 -6.677 0.025 1.00 31.13 ? 6 DA B N1 1 ATOM 320 C C2 . DA B 1 6 ? 1.985 -7.997 0.238 1.00 49.96 ? 6 DA B C2 1 ATOM 321 N N3 . DA B 1 6 ? 1.698 -8.685 1.380 1.00 50.04 ? 6 DA B N3 1 ATOM 322 C C4 . DA B 1 6 ? 1.509 -7.860 2.433 1.00 40.97 ? 6 DA B C4 1 ATOM 323 P P . DC B 1 7 ? 2.942 -13.150 6.645 1.00 74.61 ? 7 DC B P 1 ATOM 324 O OP1 . DC B 1 7 ? 2.918 -14.233 7.670 1.00 57.06 ? 7 DC B OP1 1 ATOM 325 O OP2 . DC B 1 7 ? 4.144 -12.284 6.551 1.00 62.89 ? 7 DC B OP2 1 ATOM 326 O "O5'" . DC B 1 7 ? 2.824 -13.787 5.164 1.00 62.38 ? 7 DC B "O5'" 1 ATOM 327 C "C5'" . DC B 1 7 ? 2.622 -12.952 4.000 1.00 53.01 ? 7 DC B "C5'" 1 ATOM 328 C "C4'" . DC B 1 7 ? 3.714 -12.918 2.889 1.00 71.11 ? 7 DC B "C4'" 1 ATOM 329 O "O4'" . DC B 1 7 ? 3.759 -11.606 2.249 1.00 80.69 ? 7 DC B "O4'" 1 ATOM 330 C "C3'" . DC B 1 7 ? 5.176 -13.278 3.168 1.00 68.29 ? 7 DC B "C3'" 1 ATOM 331 O "O3'" . DC B 1 7 ? 5.394 -14.621 2.632 1.00 61.68 ? 7 DC B "O3'" 1 ATOM 332 C "C2'" . DC B 1 7 ? 5.998 -12.192 2.436 1.00 62.23 ? 7 DC B "C2'" 1 ATOM 333 C "C1'" . DC B 1 7 ? 4.989 -11.440 1.522 1.00 64.57 ? 7 DC B "C1'" 1 ATOM 334 N N1 . DC B 1 7 ? 5.175 -9.940 1.438 1.00 47.64 ? 7 DC B N1 1 ATOM 335 C C2 . DC B 1 7 ? 5.490 -9.105 0.266 1.00 63.17 ? 7 DC B C2 1 ATOM 336 O O2 . DC B 1 7 ? 5.681 -9.644 -0.842 1.00 57.30 ? 7 DC B O2 1 ATOM 337 N N3 . DC B 1 7 ? 5.584 -7.721 0.390 1.00 43.60 ? 7 DC B N3 1 ATOM 338 C C4 . DC B 1 7 ? 5.365 -7.218 1.676 1.00 52.93 ? 7 DC B C4 1 ATOM 339 N N4 . DC B 1 7 ? 5.460 -5.864 1.877 1.00 38.25 ? 7 DC B N4 1 ATOM 340 C C5 . DC B 1 7 ? 5.026 -8.039 2.868 1.00 49.64 ? 7 DC B C5 1 ATOM 341 C C6 . DC B 1 7 ? 4.946 -9.365 2.680 1.00 50.89 ? 7 DC B C6 1 ATOM 342 P P . DC B 1 8 ? 6.770 -15.225 2.030 1.00 72.23 ? 8 DC B P 1 ATOM 343 O OP1 . DC B 1 8 ? 6.469 -16.687 1.884 1.00 69.49 ? 8 DC B OP1 1 ATOM 344 O OP2 . DC B 1 8 ? 7.954 -14.830 2.871 1.00 69.94 ? 8 DC B OP2 1 ATOM 345 O "O5'" . DC B 1 8 ? 6.946 -14.451 0.578 1.00 68.82 ? 8 DC B "O5'" 1 ATOM 346 C "C5'" . DC B 1 8 ? 6.072 -14.406 -0.636 1.00 57.01 ? 8 DC B "C5'" 1 ATOM 347 C "C4'" . DC B 1 8 ? 6.723 -13.858 -1.969 1.00 46.48 ? 8 DC B "C4'" 1 ATOM 348 O "O4'" . DC B 1 8 ? 6.839 -12.404 -1.937 1.00 56.11 ? 8 DC B "O4'" 1 ATOM 349 C "C3'" . DC B 1 8 ? 8.145 -14.328 -2.406 1.00 53.92 ? 8 DC B "C3'" 1 ATOM 350 O "O3'" . DC B 1 8 ? 8.499 -14.182 -3.852 1.00 62.51 ? 8 DC B "O3'" 1 ATOM 351 C "C2'" . DC B 1 8 ? 8.999 -13.352 -1.608 1.00 49.90 ? 8 DC B "C2'" 1 ATOM 352 C "C1'" . DC B 1 8 ? 8.246 -12.058 -2.041 1.00 78.97 ? 8 DC B "C1'" 1 ATOM 353 N N1 . DC B 1 8 ? 8.715 -10.772 -1.186 1.00 79.30 ? 8 DC B N1 1 ATOM 354 C C2 . DC B 1 8 ? 8.763 -9.413 -1.710 1.00 71.00 ? 8 DC B C2 1 ATOM 355 O O2 . DC B 1 8 ? 8.420 -9.063 -2.924 1.00 50.35 ? 8 DC B O2 1 ATOM 356 N N3 . DC B 1 8 ? 9.199 -8.377 -0.837 1.00 64.99 ? 8 DC B N3 1 ATOM 357 C C4 . DC B 1 8 ? 9.560 -8.676 0.474 1.00 75.40 ? 8 DC B C4 1 ATOM 358 N N4 . DC B 1 8 ? 9.849 -7.626 1.281 1.00 74.97 ? 8 DC B N4 1 ATOM 359 C C5 . DC B 1 8 ? 9.536 -10.039 0.998 1.00 64.30 ? 8 DC B C5 1 ATOM 360 C C6 . DC B 1 8 ? 9.115 -11.018 0.158 1.00 70.60 ? 8 DC B C6 1 ATOM 361 P P . DG B 1 9 ? 9.721 -15.025 -4.577 1.00 78.51 ? 9 DG B P 1 ATOM 362 O OP1 . DG B 1 9 ? 9.209 -16.448 -4.772 1.00 57.74 ? 9 DG B OP1 1 ATOM 363 O OP2 . DG B 1 9 ? 10.898 -14.709 -3.722 1.00 73.49 ? 9 DG B OP2 1 ATOM 364 O "O5'" . DG B 1 9 ? 10.066 -14.368 -6.051 1.00 38.89 ? 9 DG B "O5'" 1 ATOM 365 C "C5'" . DG B 1 9 ? 9.840 -12.991 -6.496 1.00 47.11 ? 9 DG B "C5'" 1 ATOM 366 C "C4'" . DG B 1 9 ? 10.956 -12.054 -6.006 1.00 66.46 ? 9 DG B "C4'" 1 ATOM 367 O "O4'" . DG B 1 9 ? 10.880 -11.802 -4.542 1.00 55.53 ? 9 DG B "O4'" 1 ATOM 368 C "C3'" . DG B 1 9 ? 12.416 -12.497 -6.349 1.00 71.38 ? 9 DG B "C3'" 1 ATOM 369 O "O3'" . DG B 1 9 ? 13.245 -11.585 -7.286 1.00 63.73 ? 9 DG B "O3'" 1 ATOM 370 C "C2'" . DG B 1 9 ? 13.037 -12.643 -4.915 1.00 64.60 ? 9 DG B "C2'" 1 ATOM 371 C "C1'" . DG B 1 9 ? 12.230 -11.514 -4.169 1.00 52.48 ? 9 DG B "C1'" 1 ATOM 372 N N9 . DG B 1 9 ? 12.432 -11.105 -2.735 1.00 52.24 ? 9 DG B N9 1 ATOM 373 C C8 . DG B 1 9 ? 12.693 -11.829 -1.582 1.00 54.54 ? 9 DG B C8 1 ATOM 374 N N7 . DG B 1 9 ? 12.788 -11.111 -0.485 1.00 29.15 ? 9 DG B N7 1 ATOM 375 C C5 . DG B 1 9 ? 12.585 -9.810 -0.935 1.00 34.00 ? 9 DG B C5 1 ATOM 376 C C6 . DG B 1 9 ? 12.566 -8.577 -0.230 1.00 36.70 ? 9 DG B C6 1 ATOM 377 O O6 . DG B 1 9 ? 12.744 -8.453 0.996 1.00 50.42 ? 9 DG B O6 1 ATOM 378 N N1 . DG B 1 9 ? 12.306 -7.458 -1.051 1.00 22.82 ? 9 DG B N1 1 ATOM 379 C C2 . DG B 1 9 ? 12.119 -7.571 -2.427 1.00 34.33 ? 9 DG B C2 1 ATOM 380 N N2 . DG B 1 9 ? 11.874 -6.469 -3.198 1.00 30.24 ? 9 DG B N2 1 ATOM 381 N N3 . DG B 1 9 ? 12.143 -8.718 -3.077 1.00 43.19 ? 9 DG B N3 1 ATOM 382 C C4 . DG B 1 9 ? 12.364 -9.790 -2.292 1.00 48.18 ? 9 DG B C4 1 ATOM 383 P P . DG B 1 10 ? 12.791 -10.564 -8.491 1.00 91.09 ? 10 DG B P 1 ATOM 384 O OP1 . DG B 1 10 ? 11.535 -9.813 -8.128 1.00 62.52 ? 10 DG B OP1 1 ATOM 385 O OP2 . DG B 1 10 ? 12.878 -11.385 -9.734 1.00 82.12 ? 10 DG B OP2 1 ATOM 386 O "O5'" . DG B 1 10 ? 13.959 -9.441 -8.592 1.00 74.12 ? 10 DG B "O5'" 1 ATOM 387 C "C5'" . DG B 1 10 ? 13.884 -8.165 -7.835 1.00 67.67 ? 10 DG B "C5'" 1 ATOM 388 C "C4'" . DG B 1 10 ? 14.517 -6.937 -8.536 1.00 67.26 ? 10 DG B "C4'" 1 ATOM 389 O "O4'" . DG B 1 10 ? 14.662 -5.667 -7.765 1.00 64.08 ? 10 DG B "O4'" 1 ATOM 390 C "C3'" . DG B 1 10 ? 15.925 -7.099 -9.046 1.00 47.69 ? 10 DG B "C3'" 1 ATOM 391 O "O3'" . DG B 1 10 ? 15.880 -6.294 -10.220 1.00 64.82 ? 10 DG B "O3'" 1 ATOM 392 C "C2'" . DG B 1 10 ? 16.820 -6.464 -7.945 1.00 43.69 ? 10 DG B "C2'" 1 ATOM 393 C "C1'" . DG B 1 10 ? 15.897 -5.608 -7.065 1.00 41.81 ? 10 DG B "C1'" 1 ATOM 394 N N9 . DG B 1 10 ? 15.701 -6.187 -5.710 1.00 39.47 ? 10 DG B N9 1 ATOM 395 C C8 . DG B 1 10 ? 15.587 -7.555 -5.467 1.00 37.65 ? 10 DG B C8 1 ATOM 396 N N7 . DG B 1 10 ? 15.396 -7.890 -4.211 1.00 46.75 ? 10 DG B N7 1 ATOM 397 C C5 . DG B 1 10 ? 15.389 -6.669 -3.524 1.00 38.50 ? 10 DG B C5 1 ATOM 398 C C6 . DG B 1 10 ? 15.205 -6.436 -2.122 1.00 46.65 ? 10 DG B C6 1 ATOM 399 O O6 . DG B 1 10 ? 15.035 -7.310 -1.249 1.00 53.67 ? 10 DG B O6 1 ATOM 400 N N1 . DG B 1 10 ? 15.230 -5.066 -1.769 1.00 37.59 ? 10 DG B N1 1 ATOM 401 C C2 . DG B 1 10 ? 15.402 -4.035 -2.703 1.00 46.39 ? 10 DG B C2 1 ATOM 402 N N2 . DG B 1 10 ? 15.425 -2.757 -2.206 1.00 36.73 ? 10 DG B N2 1 ATOM 403 N N3 . DG B 1 10 ? 15.587 -4.273 -4.035 1.00 38.46 ? 10 DG B N3 1 ATOM 404 C C4 . DG B 1 10 ? 15.562 -5.603 -4.417 1.00 43.52 ? 10 DG B C4 1 HETATM 405 CO CO . CO C 2 . ? 6.424 0.181 1.604 1.00 53.36 ? 11 CO A CO 1 HETATM 406 CO CO . CO D 2 . ? -6.527 0.015 -2.032 1.00 46.85 ? 11 CO B CO 1 HETATM 407 CO CO . CO E 2 . ? 12.973 -11.355 2.057 1.00 56.81 ? 12 CO B CO 1 HETATM 408 O O . HOH F 3 . ? -15.265 -9.552 1.525 1.00 36.10 ? 12 HOH A O 1 HETATM 409 O O . HOH F 3 . ? 5.689 -1.917 1.520 1.00 32.38 ? 13 HOH A O 1 HETATM 410 O O . HOH F 3 . ? -12.764 -11.493 0.270 1.00 45.15 ? 14 HOH A O 1 HETATM 411 O O . HOH F 3 . ? -12.256 -3.404 7.231 1.00 39.91 ? 15 HOH A O 1 HETATM 412 O O . HOH G 3 . ? 14.876 -9.707 -2.647 1.00 29.33 ? 13 HOH B O 1 HETATM 413 O O . HOH G 3 . ? -6.104 -2.247 -2.646 1.00 32.12 ? 14 HOH B O 1 HETATM 414 O O . HOH G 3 . ? 13.332 -13.476 0.311 1.00 37.89 ? 15 HOH B O 1 HETATM 415 O O . HOH G 3 . ? -16.696 -1.042 -9.445 1.00 36.73 ? 16 HOH B O 1 HETATM 416 O O . HOH G 3 . ? -4.149 6.046 10.230 1.00 48.17 ? 17 HOH B O 1 HETATM 417 O O . HOH G 3 . ? 9.497 -17.288 7.032 1.00 42.50 ? 18 HOH B O 1 HETATM 418 O O . HOH G 3 . ? 10.506 -19.089 -0.354 1.00 28.19 ? 19 HOH B O 1 #