data_401D # _entry.id 401D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 401D pdb_0000401d 10.2210/pdb401d/pdb RCSB AD0001 ? ? WWPDB D_1000179202 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1998-07-06 2 'Structure model' 1 1 2008-05-22 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 401D _pdbx_database_status.recvd_initial_deposition_date 1998-06-02 _pdbx_database_status.deposit_site NDB _pdbx_database_status.process_site NDB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Luo, M.' 1 'Finley, J.B.' 2 # _citation.id primary _citation.title 'X-ray crystal structures of half the human papilloma virus E2 binding site: d(GACCGCGGTC).' _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 26 _citation.page_first 5719 _citation.page_last 5727 _citation.year 1998 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 9838004 _citation.pdbx_database_id_DOI 10.1093/nar/26.24.5719 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Finley, J.B.' 1 ? primary 'Luo, M.' 2 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*GP*AP*CP*CP*GP*CP*GP*GP*TP*C)-3') ; 3045.993 1 ? ? ? ? 2 water nat water 18.015 34 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DG)(DA)(DC)(DC)(DG)(DC)(DG)(DG)(DT)(DC)' _entity_poly.pdbx_seq_one_letter_code_can GACCGCGGTC _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DA n 1 3 DC n 1 4 DC n 1 5 DG n 1 6 DC n 1 7 DG n 1 8 DG n 1 9 DT n 1 10 DC n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG G A . n A 1 2 DA 2 2 2 DA A A . n A 1 3 DC 3 3 3 DC C A . n A 1 4 DC 4 4 4 DC C A . n A 1 5 DG 5 5 5 DG G A . n A 1 6 DC 6 6 6 DC C A . n A 1 7 DG 7 7 7 DG G A . n A 1 8 DG 8 8 8 DG G A . n A 1 9 DT 9 9 9 DT T A . n A 1 10 DC 10 10 10 DC C A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 11 11 HOH HOH A . B 2 HOH 2 12 12 HOH HOH A . B 2 HOH 3 13 13 HOH HOH A . B 2 HOH 4 14 14 HOH HOH A . B 2 HOH 5 15 15 HOH HOH A . B 2 HOH 6 16 16 HOH HOH A . B 2 HOH 7 17 17 HOH HOH A . B 2 HOH 8 18 18 HOH HOH A . B 2 HOH 9 19 19 HOH HOH A . B 2 HOH 10 20 20 HOH HOH A . B 2 HOH 11 21 21 HOH HOH A . B 2 HOH 12 22 22 HOH HOH A . B 2 HOH 13 23 23 HOH HOH A . B 2 HOH 14 24 24 HOH HOH A . B 2 HOH 15 25 25 HOH HOH A . B 2 HOH 16 26 26 HOH HOH A . B 2 HOH 17 27 27 HOH HOH A . B 2 HOH 18 28 28 HOH HOH A . B 2 HOH 19 29 29 HOH HOH A . B 2 HOH 20 30 30 HOH HOH A . B 2 HOH 21 31 31 HOH HOH A . B 2 HOH 22 32 32 HOH HOH A . B 2 HOH 23 33 33 HOH HOH A . B 2 HOH 24 35 35 HOH HOH A . B 2 HOH 25 37 37 HOH HOH A . B 2 HOH 26 38 38 HOH HOH A . B 2 HOH 27 39 39 HOH HOH A . B 2 HOH 28 40 40 HOH HOH A . B 2 HOH 29 41 41 HOH HOH A . B 2 HOH 30 42 42 HOH HOH A . B 2 HOH 31 43 43 HOH HOH A . B 2 HOH 32 44 44 HOH HOH A . B 2 HOH 33 45 45 HOH HOH A . B 2 HOH 34 46 46 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR refinement . ? 1 SAINT 'data reduction' . ? 2 SAINT 'data scaling' . ? 3 # _cell.entry_id 401D _cell.length_a 38.444 _cell.length_b 38.444 _cell.length_c 80.175 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 401D _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 # _exptl.entry_id 401D _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.68 _exptl_crystal.density_percent_sol 56.0000 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_details 'VAPOR DIFFUSION' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 WATER ? ? ? 1 2 1 MPD ? ? ? 1 3 1 SPERMINE_HCL ? ? ? 1 4 1 'NA CACODYLATE' ? ? ? 1 5 2 WATER ? ? ? 1 6 2 MPD ? ? ? # _diffrn.id 1 _diffrn.crystal_id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'AREA DETECTOR' _diffrn_detector.type 'SIEMENS HI-STAR' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _reflns.entry_id 401D _reflns.observed_criterion_sigma_I 3.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low ? _reflns.d_resolution_high 2.200 _reflns.number_obs 1811 _reflns.number_all ? _reflns.percent_possible_obs 82.300 _reflns.pdbx_Rmerge_I_obs 0.0390000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.000 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 401D _refine.ls_number_reflns_obs 1779 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 3.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 5.000 _refine.ls_d_res_high 2.200 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.2190000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2190000 _refine.ls_R_factor_R_free 0.2850000 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ISOTROPIC _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 227 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 102 _refine_hist.number_atoms_total 329 _refine_hist.d_res_high 2.200 _refine_hist.d_res_low 5.000 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.005 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 0.81 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _pdbx_xplor_file.serial_no 1 _pdbx_xplor_file.param_file PARAM_NDBX_HIGH.DNA _pdbx_xplor_file.topol_file TOP_NDBX.DNA _pdbx_xplor_file.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 401D _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 401D _struct.title 'STRUCTURE OF A DNA IN LOW SALT CONDITIONS D(GACCGCGGTC)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 401D _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'DNA DOUBLE HELIX, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 401D _struct_ref.pdbx_db_accession 401D _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 401D _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 10 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 401D _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 10 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 10 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 11_655 -x+y+1,y,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 38.4440000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 40.0875000000 # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 A DC 10 N3 ? ? A DG 1 A DC 10 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 A DC 10 O2 ? ? A DG 1 A DC 10 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 A DC 10 N4 ? ? A DG 1 A DC 10 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DA 2 N1 ? ? ? 1_555 A DT 9 N3 ? ? A DA 2 A DT 9 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DA 2 N6 ? ? ? 1_555 A DT 9 O4 ? ? A DA 2 A DT 9 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 3 N3 ? ? ? 1_555 A DG 8 N1 ? ? A DC 3 A DG 8 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 3 N4 ? ? ? 1_555 A DG 8 O6 ? ? A DC 3 A DG 8 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 3 O2 ? ? ? 1_555 A DG 8 N2 ? ? A DC 3 A DG 8 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 4 N3 ? ? ? 1_555 A DG 7 N1 ? ? A DC 4 A DG 7 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DC 4 N4 ? ? ? 1_555 A DG 7 O6 ? ? A DC 4 A DG 7 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DC 4 O2 ? ? ? 1_555 A DG 7 N2 ? ? A DC 4 A DG 7 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 5 N1 ? ? ? 1_555 A DC 6 N3 ? ? A DG 5 A DC 6 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DG 5 N2 ? ? ? 1_555 A DC 6 O2 ? ? A DG 5 A DC 6 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DG 5 O6 ? ? ? 1_555 A DC 6 N4 ? ? A DG 5 A DC 6 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 6 N3 ? ? ? 1_555 A DG 5 N1 ? ? A DC 6 A DG 5 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 6 N4 ? ? ? 1_555 A DG 5 O6 ? ? A DC 6 A DG 5 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DC 6 O2 ? ? ? 1_555 A DG 5 N2 ? ? A DC 6 A DG 5 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DG 7 N1 ? ? ? 1_555 A DC 4 N3 ? ? A DG 7 A DC 4 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DG 7 N2 ? ? ? 1_555 A DC 4 O2 ? ? A DG 7 A DC 4 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DG 7 O6 ? ? ? 1_555 A DC 4 N4 ? ? A DG 7 A DC 4 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 8 N1 ? ? ? 1_555 A DC 3 N3 ? ? A DG 8 A DC 3 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 8 N2 ? ? ? 1_555 A DC 3 O2 ? ? A DG 8 A DC 3 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DG 8 O6 ? ? ? 1_555 A DC 3 N4 ? ? A DG 8 A DC 3 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DT 9 N3 ? ? ? 1_555 A DA 2 N1 ? ? A DT 9 A DA 2 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DT 9 O4 ? ? ? 1_555 A DA 2 N6 ? ? A DT 9 A DA 2 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DC 10 N3 ? ? ? 1_555 A DG 1 N1 ? ? A DC 10 A DG 1 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DC 10 N4 ? ? ? 1_555 A DG 1 O6 ? ? A DC 10 A DG 1 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DC 10 O2 ? ? ? 1_555 A DG 1 N2 ? ? A DC 10 A DG 1 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DC OP3 O N N 37 DC P P N N 38 DC OP1 O N N 39 DC OP2 O N N 40 DC "O5'" O N N 41 DC "C5'" C N N 42 DC "C4'" C N R 43 DC "O4'" O N N 44 DC "C3'" C N S 45 DC "O3'" O N N 46 DC "C2'" C N N 47 DC "C1'" C N R 48 DC N1 N N N 49 DC C2 C N N 50 DC O2 O N N 51 DC N3 N N N 52 DC C4 C N N 53 DC N4 N N N 54 DC C5 C N N 55 DC C6 C N N 56 DC HOP3 H N N 57 DC HOP2 H N N 58 DC "H5'" H N N 59 DC "H5''" H N N 60 DC "H4'" H N N 61 DC "H3'" H N N 62 DC "HO3'" H N N 63 DC "H2'" H N N 64 DC "H2''" H N N 65 DC "H1'" H N N 66 DC H41 H N N 67 DC H42 H N N 68 DC H5 H N N 69 DC H6 H N N 70 DG OP3 O N N 71 DG P P N N 72 DG OP1 O N N 73 DG OP2 O N N 74 DG "O5'" O N N 75 DG "C5'" C N N 76 DG "C4'" C N R 77 DG "O4'" O N N 78 DG "C3'" C N S 79 DG "O3'" O N N 80 DG "C2'" C N N 81 DG "C1'" C N R 82 DG N9 N Y N 83 DG C8 C Y N 84 DG N7 N Y N 85 DG C5 C Y N 86 DG C6 C N N 87 DG O6 O N N 88 DG N1 N N N 89 DG C2 C N N 90 DG N2 N N N 91 DG N3 N N N 92 DG C4 C Y N 93 DG HOP3 H N N 94 DG HOP2 H N N 95 DG "H5'" H N N 96 DG "H5''" H N N 97 DG "H4'" H N N 98 DG "H3'" H N N 99 DG "HO3'" H N N 100 DG "H2'" H N N 101 DG "H2''" H N N 102 DG "H1'" H N N 103 DG H8 H N N 104 DG H1 H N N 105 DG H21 H N N 106 DG H22 H N N 107 DT OP3 O N N 108 DT P P N N 109 DT OP1 O N N 110 DT OP2 O N N 111 DT "O5'" O N N 112 DT "C5'" C N N 113 DT "C4'" C N R 114 DT "O4'" O N N 115 DT "C3'" C N S 116 DT "O3'" O N N 117 DT "C2'" C N N 118 DT "C1'" C N R 119 DT N1 N N N 120 DT C2 C N N 121 DT O2 O N N 122 DT N3 N N N 123 DT C4 C N N 124 DT O4 O N N 125 DT C5 C N N 126 DT C7 C N N 127 DT C6 C N N 128 DT HOP3 H N N 129 DT HOP2 H N N 130 DT "H5'" H N N 131 DT "H5''" H N N 132 DT "H4'" H N N 133 DT "H3'" H N N 134 DT "HO3'" H N N 135 DT "H2'" H N N 136 DT "H2''" H N N 137 DT "H1'" H N N 138 DT H3 H N N 139 DT H71 H N N 140 DT H72 H N N 141 DT H73 H N N 142 DT H6 H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DT OP3 P sing N N 113 DT OP3 HOP3 sing N N 114 DT P OP1 doub N N 115 DT P OP2 sing N N 116 DT P "O5'" sing N N 117 DT OP2 HOP2 sing N N 118 DT "O5'" "C5'" sing N N 119 DT "C5'" "C4'" sing N N 120 DT "C5'" "H5'" sing N N 121 DT "C5'" "H5''" sing N N 122 DT "C4'" "O4'" sing N N 123 DT "C4'" "C3'" sing N N 124 DT "C4'" "H4'" sing N N 125 DT "O4'" "C1'" sing N N 126 DT "C3'" "O3'" sing N N 127 DT "C3'" "C2'" sing N N 128 DT "C3'" "H3'" sing N N 129 DT "O3'" "HO3'" sing N N 130 DT "C2'" "C1'" sing N N 131 DT "C2'" "H2'" sing N N 132 DT "C2'" "H2''" sing N N 133 DT "C1'" N1 sing N N 134 DT "C1'" "H1'" sing N N 135 DT N1 C2 sing N N 136 DT N1 C6 sing N N 137 DT C2 O2 doub N N 138 DT C2 N3 sing N N 139 DT N3 C4 sing N N 140 DT N3 H3 sing N N 141 DT C4 O4 doub N N 142 DT C4 C5 sing N N 143 DT C5 C7 sing N N 144 DT C5 C6 doub N N 145 DT C7 H71 sing N N 146 DT C7 H72 sing N N 147 DT C7 H73 sing N N 148 DT C6 H6 sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 # _ndb_struct_conf_na.entry_id 401D _ndb_struct_conf_na.feature 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 1 1_555 A DC 10 11_655 -0.855 -0.513 -0.130 -1.751 -8.496 -1.628 1 A_DG1:DC10_A A 1 ? A 10 ? 19 1 1 A DA 2 1_555 A DT 9 11_655 -0.385 -0.234 0.054 2.500 -14.411 4.947 2 A_DA2:DT9_A A 2 ? A 9 ? 20 1 1 A DC 3 1_555 A DG 8 11_655 0.352 0.100 0.200 10.335 -11.458 6.051 3 A_DC3:DG8_A A 3 ? A 8 ? 19 1 1 A DC 4 1_555 A DG 7 11_655 0.074 -0.066 -0.162 13.840 -12.422 0.776 4 A_DC4:DG7_A A 4 ? A 7 ? 19 1 1 A DG 5 1_555 A DC 6 11_655 -0.119 -0.127 0.060 2.266 -10.372 1.022 5 A_DG5:DC6_A A 5 ? A 6 ? 19 1 1 A DC 6 1_555 A DG 5 11_655 0.119 -0.127 0.060 -2.266 -10.372 1.022 6 A_DC6:DG5_A A 6 ? A 5 ? 19 1 1 A DG 7 1_555 A DC 4 11_655 -0.074 -0.066 -0.162 -13.840 -12.422 0.776 7 A_DG7:DC4_A A 7 ? A 4 ? 19 1 1 A DG 8 1_555 A DC 3 11_655 -0.352 0.100 0.200 -10.335 -11.458 6.051 8 A_DG8:DC3_A A 8 ? A 3 ? 19 1 1 A DT 9 1_555 A DA 2 11_655 0.385 -0.234 0.054 -2.500 -14.411 4.947 9 A_DT9:DA2_A A 9 ? A 2 ? 20 1 1 A DC 10 1_555 A DG 1 11_655 0.855 -0.513 -0.130 1.751 -8.496 -1.628 10 A_DC10:DG1_A A 10 ? A 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 1 1_555 A DC 10 11_655 A DA 2 1_555 A DT 9 11_655 0.039 -0.510 3.156 -2.788 9.161 34.342 -2.094 -0.448 2.917 15.153 4.612 35.613 1 AA_DG1DA2:DT9DC10_AA A 1 ? A 10 ? A 2 ? A 9 ? 1 A DA 2 1_555 A DT 9 11_655 A DC 3 1_555 A DG 8 11_655 0.638 -1.147 3.154 -2.118 2.904 36.664 -2.188 -1.281 3.017 4.603 3.356 36.834 2 AA_DA2DC3:DG8DT9_AA A 2 ? A 9 ? A 3 ? A 8 ? 1 A DC 3 1_555 A DG 8 11_655 A DC 4 1_555 A DG 7 11_655 -0.955 -1.827 3.042 -0.574 7.642 26.028 -5.548 1.913 2.436 16.517 1.240 27.114 3 AA_DC3DC4:DG7DG8_AA A 3 ? A 8 ? A 4 ? A 7 ? 1 A DC 4 1_555 A DG 7 11_655 A DG 5 1_555 A DC 6 11_655 -0.603 -1.779 3.387 -5.367 13.055 31.965 -4.853 0.232 2.555 22.391 9.206 34.868 4 AA_DC4DG5:DC6DG7_AA A 4 ? A 7 ? A 5 ? A 6 ? 1 A DG 5 1_555 A DC 6 11_655 A DC 6 1_555 A DG 5 11_655 0.000 -1.722 3.328 0.000 4.284 35.951 -3.367 0.000 3.109 6.910 0.000 36.197 5 AA_DG5DC6:DG5DC6_AA A 5 ? A 6 ? A 6 ? A 5 ? 1 A DC 6 1_555 A DG 5 11_655 A DG 7 1_555 A DC 4 11_655 0.603 -1.779 3.387 5.367 13.055 31.965 -4.853 -0.232 2.555 22.391 -9.206 34.868 6 AA_DC6DG7:DC4DG5_AA A 6 ? A 5 ? A 7 ? A 4 ? 1 A DG 7 1_555 A DC 4 11_655 A DG 8 1_555 A DC 3 11_655 0.955 -1.827 3.042 0.574 7.642 26.028 -5.548 -1.913 2.436 16.517 -1.240 27.114 7 AA_DG7DG8:DC3DC4_AA A 7 ? A 4 ? A 8 ? A 3 ? 1 A DG 8 1_555 A DC 3 11_655 A DT 9 1_555 A DA 2 11_655 -0.638 -1.147 3.154 2.118 2.904 36.664 -2.188 1.281 3.017 4.603 -3.356 36.834 8 AA_DG8DT9:DA2DC3_AA A 8 ? A 3 ? A 9 ? A 2 ? 1 A DT 9 1_555 A DA 2 11_655 A DC 10 1_555 A DG 1 11_655 -0.039 -0.510 3.156 2.788 9.161 34.342 -2.094 0.448 2.917 15.153 -4.612 35.613 9 AA_DT9DC10:DG1DA2_AA A 9 ? A 2 ? A 10 ? A 1 ? # _atom_sites.entry_id 401D _atom_sites.fract_transf_matrix[1][1] 0.026010 _atom_sites.fract_transf_matrix[1][2] 0.015020 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.030040 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012470 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 O "O5'" . DG A 1 1 ? 28.445 12.780 16.727 1.00 19.94 ? 1 DG A "O5'" 1 ATOM 2 C "C5'" . DG A 1 1 ? 28.383 14.200 16.550 1.00 17.21 ? 1 DG A "C5'" 1 ATOM 3 C "C4'" . DG A 1 1 ? 27.495 14.612 15.397 1.00 17.12 ? 1 DG A "C4'" 1 ATOM 4 O "O4'" . DG A 1 1 ? 28.008 14.105 14.149 1.00 13.77 ? 1 DG A "O4'" 1 ATOM 5 C "C3'" . DG A 1 1 ? 26.063 14.109 15.475 1.00 16.70 ? 1 DG A "C3'" 1 ATOM 6 O "O3'" . DG A 1 1 ? 25.263 15.013 16.251 1.00 19.38 ? 1 DG A "O3'" 1 ATOM 7 C "C2'" . DG A 1 1 ? 25.641 14.146 14.019 1.00 15.75 ? 1 DG A "C2'" 1 ATOM 8 C "C1'" . DG A 1 1 ? 26.924 13.784 13.279 1.00 14.88 ? 1 DG A "C1'" 1 ATOM 9 N N9 . DG A 1 1 ? 27.033 12.373 12.916 1.00 17.74 ? 1 DG A N9 1 ATOM 10 C C8 . DG A 1 1 ? 27.692 11.380 13.607 1.00 18.97 ? 1 DG A C8 1 ATOM 11 N N7 . DG A 1 1 ? 27.632 10.217 13.016 1.00 15.22 ? 1 DG A N7 1 ATOM 12 C C5 . DG A 1 1 ? 26.888 10.457 11.868 1.00 17.51 ? 1 DG A C5 1 ATOM 13 C C6 . DG A 1 1 ? 26.504 9.578 10.826 1.00 15.44 ? 1 DG A C6 1 ATOM 14 O O6 . DG A 1 1 ? 26.772 8.385 10.695 1.00 17.68 ? 1 DG A O6 1 ATOM 15 N N1 . DG A 1 1 ? 25.734 10.226 9.865 1.00 16.82 ? 1 DG A N1 1 ATOM 16 C C2 . DG A 1 1 ? 25.384 11.559 9.903 1.00 17.50 ? 1 DG A C2 1 ATOM 17 N N2 . DG A 1 1 ? 24.606 12.005 8.900 1.00 14.45 ? 1 DG A N2 1 ATOM 18 N N3 . DG A 1 1 ? 25.759 12.394 10.859 1.00 16.73 ? 1 DG A N3 1 ATOM 19 C C4 . DG A 1 1 ? 26.500 11.779 11.801 1.00 14.78 ? 1 DG A C4 1 ATOM 20 H H1 . DG A 1 1 ? 25.410 9.675 9.086 1.00 0.28 ? 1 DG A H1 1 ATOM 21 H H21 . DG A 1 1 ? 24.314 12.970 8.882 1.00 -3.63 ? 1 DG A H21 1 ATOM 22 H H22 . DG A 1 1 ? 24.313 11.376 8.166 1.00 1.60 ? 1 DG A H22 1 ATOM 23 H "HO5'" . DG A 1 1 ? 29.035 12.620 17.467 1.00 0.85 ? 1 DG A "HO5'" 1 ATOM 24 P P . DA A 1 2 ? 23.995 14.454 17.068 1.00 19.26 ? 2 DA A P 1 ATOM 25 O OP1 . DA A 1 2 ? 23.559 15.503 18.022 1.00 23.59 ? 2 DA A OP1 1 ATOM 26 O OP2 . DA A 1 2 ? 24.357 13.109 17.582 1.00 19.04 ? 2 DA A OP2 1 ATOM 27 O "O5'" . DA A 1 2 ? 22.870 14.266 15.954 1.00 16.06 ? 2 DA A "O5'" 1 ATOM 28 C "C5'" . DA A 1 2 ? 22.393 15.378 15.187 1.00 14.98 ? 2 DA A "C5'" 1 ATOM 29 C "C4'" . DA A 1 2 ? 21.620 14.889 13.982 1.00 17.07 ? 2 DA A "C4'" 1 ATOM 30 O "O4'" . DA A 1 2 ? 22.501 14.299 13.007 1.00 13.79 ? 2 DA A "O4'" 1 ATOM 31 C "C3'" . DA A 1 2 ? 20.582 13.818 14.274 1.00 17.14 ? 2 DA A "C3'" 1 ATOM 32 O "O3'" . DA A 1 2 ? 19.350 14.403 14.709 1.00 21.29 ? 2 DA A "O3'" 1 ATOM 33 C "C2'" . DA A 1 2 ? 20.415 13.185 12.909 1.00 15.76 ? 2 DA A "C2'" 1 ATOM 34 C "C1'" . DA A 1 2 ? 21.841 13.199 12.375 1.00 12.76 ? 2 DA A "C1'" 1 ATOM 35 N N9 . DA A 1 2 ? 22.575 11.978 12.706 1.00 10.51 ? 2 DA A N9 1 ATOM 36 C C8 . DA A 1 2 ? 23.391 11.758 13.783 1.00 10.96 ? 2 DA A C8 1 ATOM 37 N N7 . DA A 1 2 ? 23.908 10.555 13.817 1.00 11.09 ? 2 DA A N7 1 ATOM 38 C C5 . DA A 1 2 ? 23.402 9.942 12.682 1.00 9.35 ? 2 DA A C5 1 ATOM 39 C C6 . DA A 1 2 ? 23.583 8.657 12.143 1.00 10.47 ? 2 DA A C6 1 ATOM 40 N N6 . DA A 1 2 ? 24.346 7.717 12.710 1.00 11.06 ? 2 DA A N6 1 ATOM 41 N N1 . DA A 1 2 ? 22.945 8.364 10.990 1.00 12.25 ? 2 DA A N1 1 ATOM 42 C C2 . DA A 1 2 ? 22.168 9.301 10.433 1.00 9.93 ? 2 DA A C2 1 ATOM 43 N N3 . DA A 1 2 ? 21.913 10.542 10.849 1.00 8.56 ? 2 DA A N3 1 ATOM 44 C C4 . DA A 1 2 ? 22.575 10.805 11.989 1.00 10.42 ? 2 DA A C4 1 ATOM 45 H H61 . DA A 1 2 ? 24.834 7.913 13.574 1.00 -2.75 ? 2 DA A H61 1 ATOM 46 H H62 . DA A 1 2 ? 24.439 6.810 12.276 1.00 0.55 ? 2 DA A H62 1 ATOM 47 P P . DC A 1 3 ? 18.393 13.588 15.709 1.00 17.98 ? 3 DC A P 1 ATOM 48 O OP1 . DC A 1 3 ? 17.261 14.479 16.049 1.00 21.44 ? 3 DC A OP1 1 ATOM 49 O OP2 . DC A 1 3 ? 19.213 12.988 16.796 1.00 20.04 ? 3 DC A OP2 1 ATOM 50 O "O5'" . DC A 1 3 ? 17.825 12.406 14.816 1.00 16.92 ? 3 DC A "O5'" 1 ATOM 51 C "C5'" . DC A 1 3 ? 16.910 12.683 13.757 1.00 17.74 ? 3 DC A "C5'" 1 ATOM 52 C "C4'" . DC A 1 3 ? 16.750 11.466 12.876 1.00 16.62 ? 3 DC A "C4'" 1 ATOM 53 O "O4'" . DC A 1 3 ? 18.033 11.098 12.332 1.00 13.12 ? 3 DC A "O4'" 1 ATOM 54 C "C3'" . DC A 1 3 ? 16.247 10.216 13.576 1.00 16.85 ? 3 DC A "C3'" 1 ATOM 55 O "O3'" . DC A 1 3 ? 14.809 10.215 13.684 1.00 17.85 ? 3 DC A "O3'" 1 ATOM 56 C "C2'" . DC A 1 3 ? 16.736 9.137 12.632 1.00 16.58 ? 3 DC A "C2'" 1 ATOM 57 C "C1'" . DC A 1 3 ? 18.095 9.677 12.191 1.00 15.13 ? 3 DC A "C1'" 1 ATOM 58 N N1 . DC A 1 3 ? 19.199 9.179 13.025 1.00 12.40 ? 3 DC A N1 1 ATOM 59 C C2 . DC A 1 3 ? 19.750 7.947 12.720 1.00 11.65 ? 3 DC A C2 1 ATOM 60 O O2 . DC A 1 3 ? 19.337 7.341 11.725 1.00 13.90 ? 3 DC A O2 1 ATOM 61 N N3 . DC A 1 3 ? 20.715 7.441 13.509 1.00 9.80 ? 3 DC A N3 1 ATOM 62 C C4 . DC A 1 3 ? 21.140 8.130 14.566 1.00 8.68 ? 3 DC A C4 1 ATOM 63 N N4 . DC A 1 3 ? 22.084 7.580 15.331 1.00 5.25 ? 3 DC A N4 1 ATOM 64 C C5 . DC A 1 3 ? 20.615 9.412 14.886 1.00 7.30 ? 3 DC A C5 1 ATOM 65 C C6 . DC A 1 3 ? 19.657 9.895 14.094 1.00 10.90 ? 3 DC A C6 1 ATOM 66 H H41 . DC A 1 3 ? 22.422 8.072 16.145 1.00 -0.22 ? 3 DC A H41 1 ATOM 67 H H42 . DC A 1 3 ? 22.458 6.672 15.095 1.00 -1.59 ? 3 DC A H42 1 ATOM 68 P P . DC A 1 4 ? 14.095 9.365 14.853 1.00 14.97 ? 4 DC A P 1 ATOM 69 O OP1 . DC A 1 4 ? 12.684 9.788 14.982 1.00 20.66 ? 4 DC A OP1 1 ATOM 70 O OP2 . DC A 1 4 ? 14.979 9.383 16.047 1.00 16.36 ? 4 DC A OP2 1 ATOM 71 O "O5'" . DC A 1 4 ? 14.095 7.889 14.277 1.00 13.68 ? 4 DC A "O5'" 1 ATOM 72 C "C5'" . DC A 1 4 ? 13.442 7.604 13.046 1.00 15.28 ? 4 DC A "C5'" 1 ATOM 73 C "C4'" . DC A 1 4 ? 13.787 6.207 12.591 1.00 15.73 ? 4 DC A "C4'" 1 ATOM 74 O "O4'" . DC A 1 4 ? 15.171 6.141 12.211 1.00 15.49 ? 4 DC A "O4'" 1 ATOM 75 C "C3'" . DC A 1 4 ? 13.629 5.132 13.650 1.00 15.89 ? 4 DC A "C3'" 1 ATOM 76 O "O3'" . DC A 1 4 ? 12.278 4.702 13.789 1.00 17.36 ? 4 DC A "O3'" 1 ATOM 77 C "C2'" . DC A 1 4 ? 14.489 4.033 13.068 1.00 13.91 ? 4 DC A "C2'" 1 ATOM 78 C "C1'" . DC A 1 4 ? 15.660 4.825 12.494 1.00 15.50 ? 4 DC A "C1'" 1 ATOM 79 N N1 . DC A 1 4 ? 16.778 4.936 13.439 1.00 12.78 ? 4 DC A N1 1 ATOM 80 C C2 . DC A 1 4 ? 17.669 3.875 13.515 1.00 14.08 ? 4 DC A C2 1 ATOM 81 O O2 . DC A 1 4 ? 17.482 2.886 12.789 1.00 13.67 ? 4 DC A O2 1 ATOM 82 N N3 . DC A 1 4 ? 18.704 3.938 14.373 1.00 14.40 ? 4 DC A N3 1 ATOM 83 C C4 . DC A 1 4 ? 18.861 5.002 15.150 1.00 9.25 ? 4 DC A C4 1 ATOM 84 N N4 . DC A 1 4 ? 19.901 4.995 15.996 1.00 6.68 ? 4 DC A N4 1 ATOM 85 C C5 . DC A 1 4 ? 17.964 6.110 15.101 1.00 8.65 ? 4 DC A C5 1 ATOM 86 C C6 . DC A 1 4 ? 16.946 6.037 14.234 1.00 12.29 ? 4 DC A C6 1 ATOM 87 H H41 . DC A 1 4 ? 20.058 5.780 16.611 1.00 -1.36 ? 4 DC A H41 1 ATOM 88 H H42 . DC A 1 4 ? 20.525 4.203 16.018 1.00 1.44 ? 4 DC A H42 1 ATOM 89 P P . DG A 1 5 ? 11.805 4.044 15.171 1.00 18.31 ? 5 DG A P 1 ATOM 90 O OP1 . DG A 1 5 ? 10.325 3.973 15.152 1.00 20.54 ? 5 DG A OP1 1 ATOM 91 O OP2 . DG A 1 5 ? 12.495 4.736 16.289 1.00 17.66 ? 5 DG A OP2 1 ATOM 92 O "O5'" . DG A 1 5 ? 12.387 2.566 15.084 1.00 17.42 ? 5 DG A "O5'" 1 ATOM 93 C "C5'" . DG A 1 5 ? 11.908 1.654 14.082 1.00 15.38 ? 5 DG A "C5'" 1 ATOM 94 C "C4'" . DG A 1 5 ? 12.634 0.333 14.186 1.00 13.44 ? 5 DG A "C4'" 1 ATOM 95 O "O4'" . DG A 1 5 ? 14.018 0.492 13.825 1.00 12.19 ? 5 DG A "O4'" 1 ATOM 96 C "C3'" . DG A 1 5 ? 12.659 -0.239 15.591 1.00 14.60 ? 5 DG A "C3'" 1 ATOM 97 O "O3'" . DG A 1 5 ? 11.468 -0.967 15.893 1.00 13.65 ? 5 DG A "O3'" 1 ATOM 98 C "C2'" . DG A 1 5 ? 13.868 -1.148 15.527 1.00 11.58 ? 5 DG A "C2'" 1 ATOM 99 C "C1'" . DG A 1 5 ? 14.824 -0.321 14.678 1.00 10.77 ? 5 DG A "C1'" 1 ATOM 100 N N9 . DG A 1 5 ? 15.674 0.560 15.470 1.00 7.38 ? 5 DG A N9 1 ATOM 101 C C8 . DG A 1 5 ? 15.557 1.921 15.626 1.00 3.29 ? 5 DG A C8 1 ATOM 102 N N7 . DG A 1 5 ? 16.486 2.428 16.390 1.00 6.42 ? 5 DG A N7 1 ATOM 103 C C5 . DG A 1 5 ? 17.260 1.335 16.760 1.00 5.20 ? 5 DG A C5 1 ATOM 104 C C6 . DG A 1 5 ? 18.418 1.261 17.568 1.00 4.02 ? 5 DG A C6 1 ATOM 105 O O6 . DG A 1 5 ? 19.024 2.176 18.116 1.00 5.31 ? 5 DG A O6 1 ATOM 106 N N1 . DG A 1 5 ? 18.871 -0.052 17.701 1.00 5.63 ? 5 DG A N1 1 ATOM 107 C C2 . DG A 1 5 ? 18.285 -1.149 17.117 1.00 2.64 ? 5 DG A C2 1 ATOM 108 N N2 . DG A 1 5 ? 18.846 -2.337 17.374 1.00 2.00 ? 5 DG A N2 1 ATOM 109 N N3 . DG A 1 5 ? 17.220 -1.086 16.342 1.00 6.00 ? 5 DG A N3 1 ATOM 110 C C4 . DG A 1 5 ? 16.763 0.175 16.210 1.00 2.95 ? 5 DG A C4 1 ATOM 111 H H1 . DG A 1 5 ? 19.690 -0.207 18.272 1.00 0.80 ? 5 DG A H1 1 ATOM 112 H H21 . DG A 1 5 ? 18.457 -3.181 16.979 1.00 0.70 ? 5 DG A H21 1 ATOM 113 H H22 . DG A 1 5 ? 19.663 -2.391 17.966 1.00 -1.96 ? 5 DG A H22 1 ATOM 114 P P . DC A 1 6 ? 11.011 -1.100 17.420 1.00 13.94 ? 6 DC A P 1 ATOM 115 O OP1 . DC A 1 6 ? 9.719 -1.821 17.488 1.00 13.64 ? 6 DC A OP1 1 ATOM 116 O OP2 . DC A 1 6 ? 11.126 0.245 18.023 1.00 17.86 ? 6 DC A OP2 1 ATOM 117 O "O5'" . DC A 1 6 ? 12.159 -1.991 18.062 1.00 10.56 ? 6 DC A "O5'" 1 ATOM 118 C "C5'" . DC A 1 6 ? 12.274 -3.383 17.744 1.00 11.64 ? 6 DC A "C5'" 1 ATOM 119 C "C4'" . DC A 1 6 ? 13.366 -4.014 18.575 1.00 8.61 ? 6 DC A "C4'" 1 ATOM 120 O "O4'" . DC A 1 6 ? 14.656 -3.514 18.180 1.00 12.90 ? 6 DC A "O4'" 1 ATOM 121 C "C3'" . DC A 1 6 ? 13.294 -3.732 20.058 1.00 8.64 ? 6 DC A "C3'" 1 ATOM 122 O "O3'" . DC A 1 6 ? 12.364 -4.544 20.749 1.00 13.95 ? 6 DC A "O3'" 1 ATOM 123 C "C2'" . DC A 1 6 ? 14.706 -4.076 20.476 1.00 12.33 ? 6 DC A "C2'" 1 ATOM 124 C "C1'" . DC A 1 6 ? 15.509 -3.479 19.330 1.00 10.42 ? 6 DC A "C1'" 1 ATOM 125 N N1 . DC A 1 6 ? 15.859 -2.080 19.604 1.00 11.65 ? 6 DC A N1 1 ATOM 126 C C2 . DC A 1 6 ? 16.983 -1.816 20.389 1.00 12.58 ? 6 DC A C2 1 ATOM 127 O O2 . DC A 1 6 ? 17.674 -2.763 20.785 1.00 14.76 ? 6 DC A O2 1 ATOM 128 N N3 . DC A 1 6 ? 17.292 -0.538 20.696 1.00 14.18 ? 6 DC A N3 1 ATOM 129 C C4 . DC A 1 6 ? 16.533 0.460 20.239 1.00 12.29 ? 6 DC A C4 1 ATOM 130 N N4 . DC A 1 6 ? 16.881 1.705 20.573 1.00 12.71 ? 6 DC A N4 1 ATOM 131 C C5 . DC A 1 6 ? 15.388 0.224 19.419 1.00 10.23 ? 6 DC A C5 1 ATOM 132 C C6 . DC A 1 6 ? 15.093 -1.052 19.126 1.00 12.78 ? 6 DC A C6 1 ATOM 133 H H41 . DC A 1 6 ? 16.338 2.490 20.244 1.00 -1.39 ? 6 DC A H41 1 ATOM 134 H H42 . DC A 1 6 ? 17.690 1.861 21.157 1.00 3.29 ? 6 DC A H42 1 ATOM 135 P P . DG A 1 7 ? 11.798 -4.037 22.154 1.00 15.99 ? 7 DG A P 1 ATOM 136 O OP1 . DG A 1 7 ? 10.852 -5.057 22.669 1.00 19.94 ? 7 DG A OP1 1 ATOM 137 O OP2 . DG A 1 7 ? 11.349 -2.634 21.968 1.00 16.34 ? 7 DG A OP2 1 ATOM 138 O "O5'" . DG A 1 7 ? 13.076 -4.002 23.100 1.00 12.83 ? 7 DG A "O5'" 1 ATOM 139 C "C5'" . DG A 1 7 ? 13.791 -5.203 23.404 1.00 13.52 ? 7 DG A "C5'" 1 ATOM 140 C "C4'" . DG A 1 7 ? 14.975 -4.900 24.293 1.00 14.02 ? 7 DG A "C4'" 1 ATOM 141 O "O4'" . DG A 1 7 ? 15.912 -4.027 23.631 1.00 12.27 ? 7 DG A "O4'" 1 ATOM 142 C "C3'" . DG A 1 7 ? 14.663 -4.217 25.612 1.00 11.21 ? 7 DG A "C3'" 1 ATOM 143 O "O3'" . DG A 1 7 ? 14.306 -5.195 26.592 1.00 17.14 ? 7 DG A "O3'" 1 ATOM 144 C "C2'" . DG A 1 7 ? 16.010 -3.617 25.959 1.00 14.58 ? 7 DG A "C2'" 1 ATOM 145 C "C1'" . DG A 1 7 ? 16.564 -3.213 24.600 1.00 8.47 ? 7 DG A "C1'" 1 ATOM 146 N N9 . DG A 1 7 ? 16.313 -1.820 24.263 1.00 8.09 ? 7 DG A N9 1 ATOM 147 C C8 . DG A 1 7 ? 15.326 -1.313 23.446 1.00 8.46 ? 7 DG A C8 1 ATOM 148 N N7 . DG A 1 7 ? 15.387 -0.014 23.318 1.00 9.75 ? 7 DG A N7 1 ATOM 149 C C5 . DG A 1 7 ? 16.479 0.357 24.101 1.00 7.36 ? 7 DG A C5 1 ATOM 150 C C6 . DG A 1 7 ? 17.052 1.630 24.340 1.00 8.34 ? 7 DG A C6 1 ATOM 151 O O6 . DG A 1 7 ? 16.712 2.726 23.886 1.00 13.98 ? 7 DG A O6 1 ATOM 152 N N1 . DG A 1 7 ? 18.140 1.550 25.202 1.00 6.12 ? 7 DG A N1 1 ATOM 153 C C2 . DG A 1 7 ? 18.617 0.396 25.766 1.00 4.94 ? 7 DG A C2 1 ATOM 154 N N2 . DG A 1 7 ? 19.668 0.532 26.589 1.00 8.08 ? 7 DG A N2 1 ATOM 155 N N3 . DG A 1 7 ? 18.104 -0.796 25.545 1.00 6.58 ? 7 DG A N3 1 ATOM 156 C C4 . DG A 1 7 ? 17.046 -0.744 24.705 1.00 8.86 ? 7 DG A C4 1 ATOM 157 H H1 . DG A 1 7 ? 18.621 2.409 25.428 1.00 -0.48 ? 7 DG A H1 1 ATOM 158 H H21 . DG A 1 7 ? 20.062 -0.282 27.037 1.00 0.54 ? 7 DG A H21 1 ATOM 159 H H22 . DG A 1 7 ? 20.065 1.445 26.761 1.00 1.09 ? 7 DG A H22 1 ATOM 160 P P . DG A 1 8 ? 13.622 -4.729 27.967 1.00 13.18 ? 8 DG A P 1 ATOM 161 O OP1 . DG A 1 8 ? 13.394 -5.938 28.784 1.00 19.66 ? 8 DG A OP1 1 ATOM 162 O OP2 . DG A 1 8 ? 12.486 -3.834 27.630 1.00 15.17 ? 8 DG A OP2 1 ATOM 163 O "O5'" . DG A 1 8 ? 14.744 -3.862 28.679 1.00 14.95 ? 8 DG A "O5'" 1 ATOM 164 C "C5'" . DG A 1 8 ? 14.398 -2.765 29.536 1.00 12.43 ? 8 DG A "C5'" 1 ATOM 165 C "C4'" . DG A 1 8 ? 15.641 -1.972 29.857 1.00 14.30 ? 8 DG A "C4'" 1 ATOM 166 O "O4'" . DG A 1 8 ? 16.218 -1.475 28.635 1.00 11.37 ? 8 DG A "O4'" 1 ATOM 167 C "C3'" . DG A 1 8 ? 15.453 -0.745 30.733 1.00 15.04 ? 8 DG A "C3'" 1 ATOM 168 O "O3'" . DG A 1 8 ? 15.484 -1.116 32.113 1.00 16.48 ? 8 DG A "O3'" 1 ATOM 169 C "C2'" . DG A 1 8 ? 16.684 0.061 30.380 1.00 13.73 ? 8 DG A "C2'" 1 ATOM 170 C "C1'" . DG A 1 8 ? 16.824 -0.208 28.884 1.00 13.57 ? 8 DG A "C1'" 1 ATOM 171 N N9 . DG A 1 8 ? 16.151 0.789 28.058 1.00 13.22 ? 8 DG A N9 1 ATOM 172 C C8 . DG A 1 8 ? 15.077 0.608 27.216 1.00 10.00 ? 8 DG A C8 1 ATOM 173 N N7 . DG A 1 8 ? 14.732 1.699 26.587 1.00 3.41 ? 8 DG A N7 1 ATOM 174 C C5 . DG A 1 8 ? 15.628 2.657 27.048 1.00 6.86 ? 8 DG A C5 1 ATOM 175 C C6 . DG A 1 8 ? 15.763 4.029 26.718 1.00 7.58 ? 8 DG A C6 1 ATOM 176 O O6 . DG A 1 8 ? 15.093 4.698 25.921 1.00 15.10 ? 8 DG A O6 1 ATOM 177 N N1 . DG A 1 8 ? 16.808 4.627 27.417 1.00 5.98 ? 8 DG A N1 1 ATOM 178 C C2 . DG A 1 8 ? 17.617 3.985 28.322 1.00 5.06 ? 8 DG A C2 1 ATOM 179 N N2 . DG A 1 8 ? 18.573 4.723 28.892 1.00 4.15 ? 8 DG A N2 1 ATOM 180 N N3 . DG A 1 8 ? 17.499 2.713 28.642 1.00 6.09 ? 8 DG A N3 1 ATOM 181 C C4 . DG A 1 8 ? 16.497 2.113 27.967 1.00 8.70 ? 8 DG A C4 1 ATOM 182 H H1 . DG A 1 8 ? 16.977 5.608 27.249 1.00 -0.37 ? 8 DG A H1 1 ATOM 183 H H21 . DG A 1 8 ? 19.198 4.303 29.564 1.00 -1.31 ? 8 DG A H21 1 ATOM 184 H H22 . DG A 1 8 ? 18.671 5.699 28.651 1.00 -0.47 ? 8 DG A H22 1 ATOM 185 P P . DT A 1 9 ? 14.633 -0.275 33.178 1.00 16.60 ? 9 DT A P 1 ATOM 186 O OP1 . DT A 1 9 ? 14.604 -1.033 34.451 1.00 21.64 ? 9 DT A OP1 1 ATOM 187 O OP2 . DT A 1 9 ? 13.358 0.131 32.534 1.00 17.29 ? 9 DT A OP2 1 ATOM 188 O "O5'" . DT A 1 9 ? 15.509 1.033 33.407 1.00 20.09 ? 9 DT A "O5'" 1 ATOM 189 C "C5'" . DT A 1 9 ? 16.829 0.944 33.971 1.00 17.60 ? 9 DT A "C5'" 1 ATOM 190 C "C4'" . DT A 1 9 ? 17.458 2.315 34.025 1.00 14.16 ? 9 DT A "C4'" 1 ATOM 191 O "O4'" . DT A 1 9 ? 17.588 2.836 32.689 1.00 14.03 ? 9 DT A "O4'" 1 ATOM 192 C "C3'" . DT A 1 9 ? 16.594 3.319 34.765 1.00 17.72 ? 9 DT A "C3'" 1 ATOM 193 O "O3'" . DT A 1 9 ? 16.940 3.294 36.155 1.00 23.99 ? 9 DT A "O3'" 1 ATOM 194 C "C2'" . DT A 1 9 ? 17.009 4.629 34.126 1.00 14.15 ? 9 DT A "C2'" 1 ATOM 195 C "C1'" . DT A 1 9 ? 17.311 4.235 32.685 1.00 13.03 ? 9 DT A "C1'" 1 ATOM 196 N N1 . DT A 1 9 ? 16.229 4.484 31.710 1.00 11.86 ? 9 DT A N1 1 ATOM 197 C C2 . DT A 1 9 ? 16.223 5.694 31.046 1.00 11.27 ? 9 DT A C2 1 ATOM 198 O O2 . DT A 1 9 ? 17.025 6.584 31.269 1.00 10.38 ? 9 DT A O2 1 ATOM 199 N N3 . DT A 1 9 ? 15.235 5.823 30.105 1.00 11.43 ? 9 DT A N3 1 ATOM 200 C C4 . DT A 1 9 ? 14.273 4.893 29.776 1.00 10.66 ? 9 DT A C4 1 ATOM 201 O O4 . DT A 1 9 ? 13.476 5.137 28.878 1.00 19.24 ? 9 DT A O4 1 ATOM 202 C C5 . DT A 1 9 ? 14.307 3.667 30.541 1.00 8.58 ? 9 DT A C5 1 ATOM 203 C C7 . DT A 1 9 ? 13.271 2.621 30.279 1.00 3.81 ? 9 DT A C7 1 ATOM 204 C C6 . DT A 1 9 ? 15.271 3.524 31.456 1.00 10.82 ? 9 DT A C6 1 ATOM 205 H H3 . DT A 1 9 ? 15.206 6.695 29.596 1.00 -0.14 ? 9 DT A H3 1 ATOM 206 P P . DC A 1 10 ? 15.834 3.668 37.262 1.00 29.15 ? 10 DC A P 1 ATOM 207 O OP1 . DC A 1 10 ? 16.460 3.493 38.598 1.00 34.10 ? 10 DC A OP1 1 ATOM 208 O OP2 . DC A 1 10 ? 14.573 2.951 36.942 1.00 28.05 ? 10 DC A OP2 1 ATOM 209 O "O5'" . DC A 1 10 ? 15.596 5.224 37.042 1.00 24.96 ? 10 DC A "O5'" 1 ATOM 210 C "C5'" . DC A 1 10 ? 16.640 6.163 37.331 1.00 23.04 ? 10 DC A "C5'" 1 ATOM 211 C "C4'" . DC A 1 10 ? 16.272 7.531 36.805 1.00 20.09 ? 10 DC A "C4'" 1 ATOM 212 O "O4'" . DC A 1 10 ? 16.288 7.552 35.365 1.00 15.61 ? 10 DC A "O4'" 1 ATOM 213 C "C3'" . DC A 1 10 ? 14.889 8.025 37.194 1.00 19.99 ? 10 DC A "C3'" 1 ATOM 214 O "O3'" . DC A 1 10 ? 14.849 8.509 38.548 1.00 18.36 ? 10 DC A "O3'" 1 ATOM 215 C "C2'" . DC A 1 10 ? 14.633 9.075 36.131 1.00 17.70 ? 10 DC A "C2'" 1 ATOM 216 C "C1'" . DC A 1 10 ? 15.363 8.533 34.901 1.00 13.61 ? 10 DC A "C1'" 1 ATOM 217 N N1 . DC A 1 10 ? 14.473 7.904 33.919 1.00 10.50 ? 10 DC A N1 1 ATOM 218 C C2 . DC A 1 10 ? 14.091 8.645 32.810 1.00 8.79 ? 10 DC A C2 1 ATOM 219 O O2 . DC A 1 10 ? 14.536 9.791 32.681 1.00 12.66 ? 10 DC A O2 1 ATOM 220 N N3 . DC A 1 10 ? 13.245 8.103 31.907 1.00 11.23 ? 10 DC A N3 1 ATOM 221 C C4 . DC A 1 10 ? 12.779 6.867 32.092 1.00 8.63 ? 10 DC A C4 1 ATOM 222 N N4 . DC A 1 10 ? 11.927 6.382 31.190 1.00 7.04 ? 10 DC A N4 1 ATOM 223 C C5 . DC A 1 10 ? 13.164 6.078 33.211 1.00 8.82 ? 10 DC A C5 1 ATOM 224 C C6 . DC A 1 10 ? 14.011 6.629 34.092 1.00 10.53 ? 10 DC A C6 1 ATOM 225 H "HO3'" . DC A 1 10 ? 13.956 8.819 38.715 1.00 -1.18 ? 10 DC A "HO3'" 1 ATOM 226 H H41 . DC A 1 10 ? 11.589 5.437 31.285 1.00 3.12 ? 10 DC A H41 1 ATOM 227 H H42 . DC A 1 10 ? 11.619 6.947 30.414 1.00 -0.85 ? 10 DC A H42 1 HETATM 228 O O . HOH B 2 . ? 15.084 4.232 19.813 0.92 17.79 ? 11 HOH A O 1 HETATM 229 H H1 . HOH B 2 . ? 14.509 3.560 20.181 1.00 2.20 ? 11 HOH A H1 1 HETATM 230 H H2 . HOH B 2 . ? 14.672 4.477 18.985 1.00 -3.70 ? 11 HOH A H2 1 HETATM 231 O O . HOH B 2 . ? 8.633 -5.205 20.617 0.92 19.91 ? 12 HOH A O 1 HETATM 232 H H1 . HOH B 2 . ? 7.748 -5.548 20.739 1.00 0.52 ? 12 HOH A H1 1 HETATM 233 H H2 . HOH B 2 . ? 9.126 -5.929 20.236 1.00 -0.19 ? 12 HOH A H2 1 HETATM 234 O O . HOH B 2 . ? 12.832 3.510 35.090 0.92 12.43 ? 13 HOH A O 1 HETATM 235 H H1 . HOH B 2 . ? 12.323 3.313 34.303 1.00 0.34 ? 13 HOH A H1 1 HETATM 236 H H2 . HOH B 2 . ? 13.428 2.767 35.184 1.00 -2.35 ? 13 HOH A H2 1 HETATM 237 O O . HOH B 2 . ? 25.078 10.081 16.137 0.92 14.98 ? 14 HOH A O 1 HETATM 238 H H1 . HOH B 2 . ? 24.928 10.949 16.513 1.00 -0.15 ? 14 HOH A H1 1 HETATM 239 H H2 . HOH B 2 . ? 25.109 9.498 16.895 1.00 0.42 ? 14 HOH A H2 1 HETATM 240 O O . HOH B 2 . ? 9.991 -4.605 26.139 0.92 20.73 ? 15 HOH A O 1 HETATM 241 H H1 . HOH B 2 . ? 9.685 -4.683 27.045 1.00 1.05 ? 15 HOH A H1 1 HETATM 242 H H2 . HOH B 2 . ? 9.315 -5.036 25.620 1.00 3.78 ? 15 HOH A H2 1 HETATM 243 O O . HOH B 2 . ? 12.977 2.543 17.987 0.92 24.71 ? 16 HOH A O 1 HETATM 244 H H1 . HOH B 2 . ? 13.532 1.993 18.541 1.00 -1.76 ? 16 HOH A H1 1 HETATM 245 H H2 . HOH B 2 . ? 13.529 3.292 17.762 1.00 -1.61 ? 16 HOH A H2 1 HETATM 246 O O . HOH B 2 . ? 19.767 1.402 30.209 0.92 14.79 ? 17 HOH A O 1 HETATM 247 H H1 . HOH B 2 . ? 19.637 2.085 30.867 1.00 -3.35 ? 17 HOH A H1 1 HETATM 248 H H2 . HOH B 2 . ? 20.447 0.839 30.578 1.00 0.18 ? 17 HOH A H2 1 HETATM 249 O O . HOH B 2 . ? 13.290 1.860 22.372 0.92 21.52 ? 18 HOH A O 1 HETATM 250 H H1 . HOH B 2 . ? 14.004 1.380 22.791 1.00 0.09 ? 18 HOH A H1 1 HETATM 251 H H2 . HOH B 2 . ? 13.587 2.770 22.355 1.00 2.28 ? 18 HOH A H2 1 HETATM 252 O O . HOH B 2 . ? 9.092 -3.545 15.066 0.92 29.78 ? 19 HOH A O 1 HETATM 253 H H1 . HOH B 2 . ? 9.704 -2.996 14.579 1.00 1.80 ? 19 HOH A H1 1 HETATM 254 H H2 . HOH B 2 . ? 9.123 -3.205 15.962 1.00 -0.80 ? 19 HOH A H2 1 HETATM 255 O O . HOH B 2 . ? 11.347 -0.301 20.759 0.92 22.64 ? 20 HOH A O 1 HETATM 256 H H1 . HOH B 2 . ? 11.438 0.541 20.315 1.00 -1.22 ? 20 HOH A H1 1 HETATM 257 H H2 . HOH B 2 . ? 11.295 -0.945 20.052 1.00 0.80 ? 20 HOH A H2 1 HETATM 258 O O . HOH B 2 . ? 19.866 0.048 32.722 0.92 40.84 ? 21 HOH A O 1 HETATM 259 H H1 . HOH B 2 . ? 20.802 0.025 32.925 1.00 0.23 ? 21 HOH A H1 1 HETATM 260 H H2 . HOH B 2 . ? 19.441 -0.331 33.490 1.00 -0.27 ? 21 HOH A H2 1 HETATM 261 O O . HOH B 2 . ? 10.434 2.601 28.103 0.92 36.31 ? 22 HOH A O 1 HETATM 262 H H1 . HOH B 2 . ? 10.686 3.217 28.792 1.00 2.55 ? 22 HOH A H1 1 HETATM 263 H H2 . HOH B 2 . ? 9.581 2.267 28.376 1.00 -0.52 ? 22 HOH A H2 1 HETATM 264 O O . HOH B 2 . ? 15.670 1.222 11.204 0.92 38.36 ? 23 HOH A O 1 HETATM 265 H H1 . HOH B 2 . ? 15.191 0.549 11.687 1.00 -1.02 ? 23 HOH A H1 1 HETATM 266 H H2 . HOH B 2 . ? 16.568 1.158 11.531 1.00 0.11 ? 23 HOH A H2 1 HETATM 267 O O . HOH B 2 . ? 12.633 -1.288 26.556 0.92 18.82 ? 24 HOH A O 1 HETATM 268 H H1 . HOH B 2 . ? 12.536 -0.798 25.740 1.00 1.10 ? 24 HOH A H1 1 HETATM 269 H H2 . HOH B 2 . ? 12.478 -2.201 26.313 1.00 1.08 ? 24 HOH A H2 1 HETATM 270 O O . HOH B 2 . ? 16.750 17.104 15.219 0.92 13.67 ? 25 HOH A O 1 HETATM 271 H H1 . HOH B 2 . ? 17.225 17.932 15.137 1.00 -0.19 ? 25 HOH A H1 1 HETATM 272 H H2 . HOH B 2 . ? 17.407 16.484 15.535 1.00 1.43 ? 25 HOH A H2 1 HETATM 273 O O . HOH B 2 . ? 11.183 -0.661 24.128 0.92 14.09 ? 26 HOH A O 1 HETATM 274 H H1 . HOH B 2 . ? 11.354 0.278 24.192 1.00 -0.32 ? 26 HOH A H1 1 HETATM 275 H H2 . HOH B 2 . ? 11.050 -0.942 25.033 1.00 -0.66 ? 26 HOH A H2 1 HETATM 276 O O . HOH B 2 . ? 20.912 4.065 31.343 0.92 17.55 ? 27 HOH A O 1 HETATM 277 H H1 . HOH B 2 . ? 20.209 3.767 30.764 1.00 -1.40 ? 27 HOH A H1 1 HETATM 278 H H2 . HOH B 2 . ? 21.619 3.435 31.202 1.00 -0.91 ? 27 HOH A H2 1 HETATM 279 O O . HOH B 2 . ? 17.680 7.449 9.662 0.92 34.97 ? 28 HOH A O 1 HETATM 280 H H1 . HOH B 2 . ? 17.544 6.604 10.095 1.00 -1.64 ? 28 HOH A H1 1 HETATM 281 H H2 . HOH B 2 . ? 18.556 7.373 9.286 1.00 0.34 ? 28 HOH A H2 1 HETATM 282 O O . HOH B 2 . ? 10.361 4.046 31.687 0.92 21.54 ? 29 HOH A O 1 HETATM 283 H H1 . HOH B 2 . ? 11.035 4.285 32.323 1.00 -2.32 ? 29 HOH A H1 1 HETATM 284 H H2 . HOH B 2 . ? 10.851 3.733 30.928 1.00 3.17 ? 29 HOH A H2 1 HETATM 285 O O . HOH B 2 . ? 5.775 3.565 32.021 0.92 54.10 ? 30 HOH A O 1 HETATM 286 H H1 . HOH B 2 . ? 5.777 4.522 32.044 1.00 -0.85 ? 30 HOH A H1 1 HETATM 287 H H2 . HOH B 2 . ? 5.775 3.348 31.089 1.00 0.36 ? 30 HOH A H2 1 HETATM 288 O O . HOH B 2 . ? 19.894 12.183 9.431 0.92 35.18 ? 31 HOH A O 1 HETATM 289 H H1 . HOH B 2 . ? 20.562 11.820 10.003 1.00 -0.52 ? 31 HOH A H1 1 HETATM 290 H H2 . HOH B 2 . ? 19.153 11.588 9.542 1.00 1.51 ? 31 HOH A H2 1 HETATM 291 O O . HOH B 2 . ? 31.037 13.244 19.339 0.92 32.52 ? 32 HOH A O 1 HETATM 292 H H1 . HOH B 2 . ? 30.100 13.238 19.139 1.00 -0.50 ? 32 HOH A H1 1 HETATM 293 H H2 . HOH B 2 . ? 31.241 12.329 19.531 1.00 1.17 ? 32 HOH A H2 1 HETATM 294 O O . HOH B 2 . ? 11.558 -0.240 29.036 0.92 30.11 ? 33 HOH A O 1 HETATM 295 H H1 . HOH B 2 . ? 10.955 0.323 28.550 1.00 -0.33 ? 33 HOH A H1 1 HETATM 296 H H2 . HOH B 2 . ? 11.635 -1.030 28.501 1.00 -2.52 ? 33 HOH A H2 1 HETATM 297 O O . HOH B 2 . ? 15.976 11.888 34.322 0.92 13.69 ? 35 HOH A O 1 HETATM 298 H H1 . HOH B 2 . ? 15.850 11.760 35.266 1.00 1.96 ? 35 HOH A H1 1 HETATM 299 H H2 . HOH B 2 . ? 15.715 11.048 33.941 1.00 -0.38 ? 35 HOH A H2 1 HETATM 300 O O . HOH B 2 . ? 13.420 7.005 40.225 0.92 10.34 ? 37 HOH A O 1 HETATM 301 H H1 . HOH B 2 . ? 14.089 7.225 40.873 1.00 -0.69 ? 37 HOH A H1 1 HETATM 302 H H2 . HOH B 2 . ? 12.710 7.624 40.394 1.00 -3.25 ? 37 HOH A H2 1 HETATM 303 O O . HOH B 2 . ? 17.284 -2.500 35.916 0.92 37.92 ? 38 HOH A O 1 HETATM 304 H H1 . HOH B 2 . ? 18.133 -2.832 35.624 1.00 3.16 ? 38 HOH A H1 1 HETATM 305 H H2 . HOH B 2 . ? 16.878 -2.147 35.126 1.00 1.24 ? 38 HOH A H2 1 HETATM 306 O O . HOH B 2 . ? 20.933 3.007 34.529 0.92 49.67 ? 39 HOH A O 1 HETATM 307 H H1 . HOH B 2 . ? 20.827 2.704 35.430 1.00 2.93 ? 39 HOH A H1 1 HETATM 308 H H2 . HOH B 2 . ? 21.823 2.751 34.287 1.00 -0.06 ? 39 HOH A H2 1 HETATM 309 O O . HOH B 2 . ? 10.697 7.276 11.276 0.92 23.22 ? 40 HOH A O 1 HETATM 310 H H1 . HOH B 2 . ? 10.550 6.505 11.825 1.00 1.08 ? 40 HOH A H1 1 HETATM 311 H H2 . HOH B 2 . ? 11.123 7.906 11.857 1.00 -0.06 ? 40 HOH A H2 1 HETATM 312 O O . HOH B 2 . ? 23.494 14.870 8.728 0.92 19.82 ? 41 HOH A O 1 HETATM 313 H H1 . HOH B 2 . ? 23.653 15.799 8.907 1.00 1.41 ? 41 HOH A H1 1 HETATM 314 H H2 . HOH B 2 . ? 22.746 14.866 8.128 1.00 -3.30 ? 41 HOH A H2 1 HETATM 315 O O . HOH B 2 . ? 12.066 11.232 12.195 0.96 36.07 ? 42 HOH A O 1 HETATM 316 H H1 . HOH B 2 . ? 11.248 11.727 12.164 1.00 -2.80 ? 42 HOH A H1 1 HETATM 317 H H2 . HOH B 2 . ? 12.250 11.149 13.132 1.00 0.23 ? 42 HOH A H2 1 HETATM 318 O O . HOH B 2 . ? 26.672 12.712 18.951 0.96 42.39 ? 43 HOH A O 1 HETATM 319 H H1 . HOH B 2 . ? 27.559 13.063 18.900 1.00 0.23 ? 43 HOH A H1 1 HETATM 320 H H2 . HOH B 2 . ? 26.468 12.449 18.052 1.00 -3.65 ? 43 HOH A H2 1 HETATM 321 O O . HOH B 2 . ? 14.854 11.227 19.213 0.96 36.50 ? 44 HOH A O 1 HETATM 322 H H1 . HOH B 2 . ? 14.000 11.658 19.156 1.00 3.66 ? 44 HOH A H1 1 HETATM 323 H H2 . HOH B 2 . ? 14.988 11.082 20.149 1.00 1.26 ? 44 HOH A H2 1 HETATM 324 O O . HOH B 2 . ? 10.696 7.159 17.758 0.99 54.36 ? 45 HOH A O 1 HETATM 325 H H1 . HOH B 2 . ? 9.772 7.043 17.554 1.00 0.66 ? 45 HOH A H1 1 HETATM 326 H H2 . HOH B 2 . ? 10.864 6.465 18.396 1.00 0.14 ? 45 HOH A H2 1 HETATM 327 O O . HOH B 2 . ? 15.287 13.783 18.124 0.99 32.92 ? 46 HOH A O 1 HETATM 328 H H1 . HOH B 2 . ? 15.021 14.146 17.276 1.00 -1.45 ? 46 HOH A H1 1 HETATM 329 H H2 . HOH B 2 . ? 16.242 13.801 18.095 1.00 1.68 ? 46 HOH A H2 1 #