HEADER DNA 02-JUN-98 401D TITLE STRUCTURE OF A DNA IN LOW SALT CONDITIONS D(GACCGCGGTC) COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA (5'-D(*GP*AP*CP*CP*GP*CP*GP*GP*TP*C)-3'); COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES KEYWDS DNA DOUBLE HELIX, DNA EXPDTA X-RAY DIFFRACTION AUTHOR M.LUO,J.B.FINLEY REVDAT 5 28-FEB-24 401D 1 REMARK REVDAT 4 02-MAR-10 401D 1 HETATM REVDAT 3 24-FEB-09 401D 1 VERSN REVDAT 2 01-APR-03 401D 1 JRNL REVDAT 1 06-JUL-98 401D 0 JRNL AUTH J.B.FINLEY,M.LUO JRNL TITL X-RAY CRYSTAL STRUCTURES OF HALF THE HUMAN PAPILLOMA VIRUS JRNL TITL 2 E2 BINDING SITE: D(GACCGCGGTC). JRNL REF NUCLEIC ACIDS RES. V. 26 5719 1998 JRNL REFN ISSN 0305-1048 JRNL PMID 9838004 JRNL DOI 10.1093/NAR/26.24.5719 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 5.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 3.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 1779 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.219 REMARK 3 FREE R VALUE : 0.285 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 0 REMARK 3 NUCLEIC ACID ATOMS : 202 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 34 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.005 REMARK 3 BOND ANGLES (DEGREES) : 0.810 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : ISOTROPIC REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PARAM_NDBX_HIGH.DNA REMARK 3 PARAMETER FILE 2 : NULL REMARK 3 TOPOLOGY FILE 1 : TOP_NDBX.DNA REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 401D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY NDB. REMARK 100 THE DEPOSITION ID IS D_1000179202. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : AREA DETECTOR REMARK 200 DETECTOR MANUFACTURER : SIEMENS HI-STAR REMARK 200 INTENSITY-INTEGRATION SOFTWARE : SAINT REMARK 200 DATA SCALING SOFTWARE : SAINT REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 1811 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 82.3 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : 0.03900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.68 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: VAPOR DIFFUSION REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 26.72500 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 53.45000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 40.08750 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 66.81250 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 13.36250 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 26.72500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 53.45000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 66.81250 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 40.08750 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 13.36250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 38.44400 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 40.08750 DBREF 401D A 1 10 PDB 401D 401D 1 10 SEQRES 1 A 10 DG DA DC DC DG DC DG DG DT DC FORMUL 2 HOH *34(H2 O) CRYST1 38.444 38.444 80.175 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026010 0.015020 0.000000 0.00000 SCALE2 0.000000 0.030040 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012470 0.00000 ATOM 1 O5' DG A 1 28.445 12.780 16.727 1.00 19.94 O ATOM 2 C5' DG A 1 28.383 14.200 16.550 1.00 17.21 C ATOM 3 C4' DG A 1 27.495 14.612 15.397 1.00 17.12 C ATOM 4 O4' DG A 1 28.008 14.105 14.149 1.00 13.77 O ATOM 5 C3' DG A 1 26.063 14.109 15.475 1.00 16.70 C ATOM 6 O3' DG A 1 25.263 15.013 16.251 1.00 19.38 O ATOM 7 C2' DG A 1 25.641 14.146 14.019 1.00 15.75 C ATOM 8 C1' DG A 1 26.924 13.784 13.279 1.00 14.88 C ATOM 9 N9 DG A 1 27.033 12.373 12.916 1.00 17.74 N ATOM 10 C8 DG A 1 27.692 11.380 13.607 1.00 18.97 C ATOM 11 N7 DG A 1 27.632 10.217 13.016 1.00 15.22 N ATOM 12 C5 DG A 1 26.888 10.457 11.868 1.00 17.51 C ATOM 13 C6 DG A 1 26.504 9.578 10.826 1.00 15.44 C ATOM 14 O6 DG A 1 26.772 8.385 10.695 1.00 17.68 O ATOM 15 N1 DG A 1 25.734 10.226 9.865 1.00 16.82 N ATOM 16 C2 DG A 1 25.384 11.559 9.903 1.00 17.50 C ATOM 17 N2 DG A 1 24.606 12.005 8.900 1.00 14.45 N ATOM 18 N3 DG A 1 25.759 12.394 10.859 1.00 16.73 N ATOM 19 C4 DG A 1 26.500 11.779 11.801 1.00 14.78 C ATOM 20 H1 DG A 1 25.410 9.675 9.086 1.00 0.28 H ATOM 21 H21 DG A 1 24.314 12.970 8.882 1.00 -3.63 H ATOM 22 H22 DG A 1 24.313 11.376 8.166 1.00 1.60 H ATOM 23 HO5' DG A 1 29.035 12.620 17.467 1.00 0.85 H ATOM 24 P DA A 2 23.995 14.454 17.068 1.00 19.26 P ATOM 25 OP1 DA A 2 23.559 15.503 18.022 1.00 23.59 O ATOM 26 OP2 DA A 2 24.357 13.109 17.582 1.00 19.04 O ATOM 27 O5' DA A 2 22.870 14.266 15.954 1.00 16.06 O ATOM 28 C5' DA A 2 22.393 15.378 15.187 1.00 14.98 C ATOM 29 C4' DA A 2 21.620 14.889 13.982 1.00 17.07 C ATOM 30 O4' DA A 2 22.501 14.299 13.007 1.00 13.79 O ATOM 31 C3' DA A 2 20.582 13.818 14.274 1.00 17.14 C ATOM 32 O3' DA A 2 19.350 14.403 14.709 1.00 21.29 O ATOM 33 C2' DA A 2 20.415 13.185 12.909 1.00 15.76 C ATOM 34 C1' DA A 2 21.841 13.199 12.375 1.00 12.76 C ATOM 35 N9 DA A 2 22.575 11.978 12.706 1.00 10.51 N ATOM 36 C8 DA A 2 23.391 11.758 13.783 1.00 10.96 C ATOM 37 N7 DA A 2 23.908 10.555 13.817 1.00 11.09 N ATOM 38 C5 DA A 2 23.402 9.942 12.682 1.00 9.35 C ATOM 39 C6 DA A 2 23.583 8.657 12.143 1.00 10.47 C ATOM 40 N6 DA A 2 24.346 7.717 12.710 1.00 11.06 N ATOM 41 N1 DA A 2 22.945 8.364 10.990 1.00 12.25 N ATOM 42 C2 DA A 2 22.168 9.301 10.433 1.00 9.93 C ATOM 43 N3 DA A 2 21.913 10.542 10.849 1.00 8.56 N ATOM 44 C4 DA A 2 22.575 10.805 11.989 1.00 10.42 C ATOM 45 H61 DA A 2 24.834 7.913 13.574 1.00 -2.75 H ATOM 46 H62 DA A 2 24.439 6.810 12.276 1.00 0.55 H ATOM 47 P DC A 3 18.393 13.588 15.709 1.00 17.98 P ATOM 48 OP1 DC A 3 17.261 14.479 16.049 1.00 21.44 O ATOM 49 OP2 DC A 3 19.213 12.988 16.796 1.00 20.04 O ATOM 50 O5' DC A 3 17.825 12.406 14.816 1.00 16.92 O ATOM 51 C5' DC A 3 16.910 12.683 13.757 1.00 17.74 C ATOM 52 C4' DC A 3 16.750 11.466 12.876 1.00 16.62 C ATOM 53 O4' DC A 3 18.033 11.098 12.332 1.00 13.12 O ATOM 54 C3' DC A 3 16.247 10.216 13.576 1.00 16.85 C ATOM 55 O3' DC A 3 14.809 10.215 13.684 1.00 17.85 O ATOM 56 C2' DC A 3 16.736 9.137 12.632 1.00 16.58 C ATOM 57 C1' DC A 3 18.095 9.677 12.191 1.00 15.13 C ATOM 58 N1 DC A 3 19.199 9.179 13.025 1.00 12.40 N ATOM 59 C2 DC A 3 19.750 7.947 12.720 1.00 11.65 C ATOM 60 O2 DC A 3 19.337 7.341 11.725 1.00 13.90 O ATOM 61 N3 DC A 3 20.715 7.441 13.509 1.00 9.80 N ATOM 62 C4 DC A 3 21.140 8.130 14.566 1.00 8.68 C ATOM 63 N4 DC A 3 22.084 7.580 15.331 1.00 5.25 N ATOM 64 C5 DC A 3 20.615 9.412 14.886 1.00 7.30 C ATOM 65 C6 DC A 3 19.657 9.895 14.094 1.00 10.90 C ATOM 66 H41 DC A 3 22.422 8.072 16.145 1.00 -0.22 H ATOM 67 H42 DC A 3 22.458 6.672 15.095 1.00 -1.59 H ATOM 68 P DC A 4 14.095 9.365 14.853 1.00 14.97 P ATOM 69 OP1 DC A 4 12.684 9.788 14.982 1.00 20.66 O ATOM 70 OP2 DC A 4 14.979 9.383 16.047 1.00 16.36 O ATOM 71 O5' DC A 4 14.095 7.889 14.277 1.00 13.68 O ATOM 72 C5' DC A 4 13.442 7.604 13.046 1.00 15.28 C ATOM 73 C4' DC A 4 13.787 6.207 12.591 1.00 15.73 C ATOM 74 O4' DC A 4 15.171 6.141 12.211 1.00 15.49 O ATOM 75 C3' DC A 4 13.629 5.132 13.650 1.00 15.89 C ATOM 76 O3' DC A 4 12.278 4.702 13.789 1.00 17.36 O ATOM 77 C2' DC A 4 14.489 4.033 13.068 1.00 13.91 C ATOM 78 C1' DC A 4 15.660 4.825 12.494 1.00 15.50 C ATOM 79 N1 DC A 4 16.778 4.936 13.439 1.00 12.78 N ATOM 80 C2 DC A 4 17.669 3.875 13.515 1.00 14.08 C ATOM 81 O2 DC A 4 17.482 2.886 12.789 1.00 13.67 O ATOM 82 N3 DC A 4 18.704 3.938 14.373 1.00 14.40 N ATOM 83 C4 DC A 4 18.861 5.002 15.150 1.00 9.25 C ATOM 84 N4 DC A 4 19.901 4.995 15.996 1.00 6.68 N ATOM 85 C5 DC A 4 17.964 6.110 15.101 1.00 8.65 C ATOM 86 C6 DC A 4 16.946 6.037 14.234 1.00 12.29 C ATOM 87 H41 DC A 4 20.058 5.780 16.611 1.00 -1.36 H ATOM 88 H42 DC A 4 20.525 4.203 16.018 1.00 1.44 H ATOM 89 P DG A 5 11.805 4.044 15.171 1.00 18.31 P ATOM 90 OP1 DG A 5 10.325 3.973 15.152 1.00 20.54 O ATOM 91 OP2 DG A 5 12.495 4.736 16.289 1.00 17.66 O ATOM 92 O5' DG A 5 12.387 2.566 15.084 1.00 17.42 O ATOM 93 C5' DG A 5 11.908 1.654 14.082 1.00 15.38 C ATOM 94 C4' DG A 5 12.634 0.333 14.186 1.00 13.44 C ATOM 95 O4' DG A 5 14.018 0.492 13.825 1.00 12.19 O ATOM 96 C3' DG A 5 12.659 -0.239 15.591 1.00 14.60 C ATOM 97 O3' DG A 5 11.468 -0.967 15.893 1.00 13.65 O ATOM 98 C2' DG A 5 13.868 -1.148 15.527 1.00 11.58 C ATOM 99 C1' DG A 5 14.824 -0.321 14.678 1.00 10.77 C ATOM 100 N9 DG A 5 15.674 0.560 15.470 1.00 7.38 N ATOM 101 C8 DG A 5 15.557 1.921 15.626 1.00 3.29 C ATOM 102 N7 DG A 5 16.486 2.428 16.390 1.00 6.42 N ATOM 103 C5 DG A 5 17.260 1.335 16.760 1.00 5.20 C ATOM 104 C6 DG A 5 18.418 1.261 17.568 1.00 4.02 C ATOM 105 O6 DG A 5 19.024 2.176 18.116 1.00 5.31 O ATOM 106 N1 DG A 5 18.871 -0.052 17.701 1.00 5.63 N ATOM 107 C2 DG A 5 18.285 -1.149 17.117 1.00 2.64 C ATOM 108 N2 DG A 5 18.846 -2.337 17.374 1.00 2.00 N ATOM 109 N3 DG A 5 17.220 -1.086 16.342 1.00 6.00 N ATOM 110 C4 DG A 5 16.763 0.175 16.210 1.00 2.95 C ATOM 111 H1 DG A 5 19.690 -0.207 18.272 1.00 0.80 H ATOM 112 H21 DG A 5 18.457 -3.181 16.979 1.00 0.70 H ATOM 113 H22 DG A 5 19.663 -2.391 17.966 1.00 -1.96 H ATOM 114 P DC A 6 11.011 -1.100 17.420 1.00 13.94 P ATOM 115 OP1 DC A 6 9.719 -1.821 17.488 1.00 13.64 O ATOM 116 OP2 DC A 6 11.126 0.245 18.023 1.00 17.86 O ATOM 117 O5' DC A 6 12.159 -1.991 18.062 1.00 10.56 O ATOM 118 C5' DC A 6 12.274 -3.383 17.744 1.00 11.64 C ATOM 119 C4' DC A 6 13.366 -4.014 18.575 1.00 8.61 C ATOM 120 O4' DC A 6 14.656 -3.514 18.180 1.00 12.90 O ATOM 121 C3' DC A 6 13.294 -3.732 20.058 1.00 8.64 C ATOM 122 O3' DC A 6 12.364 -4.544 20.749 1.00 13.95 O ATOM 123 C2' DC A 6 14.706 -4.076 20.476 1.00 12.33 C ATOM 124 C1' DC A 6 15.509 -3.479 19.330 1.00 10.42 C ATOM 125 N1 DC A 6 15.859 -2.080 19.604 1.00 11.65 N ATOM 126 C2 DC A 6 16.983 -1.816 20.389 1.00 12.58 C ATOM 127 O2 DC A 6 17.674 -2.763 20.785 1.00 14.76 O ATOM 128 N3 DC A 6 17.292 -0.538 20.696 1.00 14.18 N ATOM 129 C4 DC A 6 16.533 0.460 20.239 1.00 12.29 C ATOM 130 N4 DC A 6 16.881 1.705 20.573 1.00 12.71 N ATOM 131 C5 DC A 6 15.388 0.224 19.419 1.00 10.23 C ATOM 132 C6 DC A 6 15.093 -1.052 19.126 1.00 12.78 C ATOM 133 H41 DC A 6 16.338 2.490 20.244 1.00 -1.39 H ATOM 134 H42 DC A 6 17.690 1.861 21.157 1.00 3.29 H ATOM 135 P DG A 7 11.798 -4.037 22.154 1.00 15.99 P ATOM 136 OP1 DG A 7 10.852 -5.057 22.669 1.00 19.94 O ATOM 137 OP2 DG A 7 11.349 -2.634 21.968 1.00 16.34 O ATOM 138 O5' DG A 7 13.076 -4.002 23.100 1.00 12.83 O ATOM 139 C5' DG A 7 13.791 -5.203 23.404 1.00 13.52 C ATOM 140 C4' DG A 7 14.975 -4.900 24.293 1.00 14.02 C ATOM 141 O4' DG A 7 15.912 -4.027 23.631 1.00 12.27 O ATOM 142 C3' DG A 7 14.663 -4.217 25.612 1.00 11.21 C ATOM 143 O3' DG A 7 14.306 -5.195 26.592 1.00 17.14 O ATOM 144 C2' DG A 7 16.010 -3.617 25.959 1.00 14.58 C ATOM 145 C1' DG A 7 16.564 -3.213 24.600 1.00 8.47 C ATOM 146 N9 DG A 7 16.313 -1.820 24.263 1.00 8.09 N ATOM 147 C8 DG A 7 15.326 -1.313 23.446 1.00 8.46 C ATOM 148 N7 DG A 7 15.387 -0.014 23.318 1.00 9.75 N ATOM 149 C5 DG A 7 16.479 0.357 24.101 1.00 7.36 C ATOM 150 C6 DG A 7 17.052 1.630 24.340 1.00 8.34 C ATOM 151 O6 DG A 7 16.712 2.726 23.886 1.00 13.98 O ATOM 152 N1 DG A 7 18.140 1.550 25.202 1.00 6.12 N ATOM 153 C2 DG A 7 18.617 0.396 25.766 1.00 4.94 C ATOM 154 N2 DG A 7 19.668 0.532 26.589 1.00 8.08 N ATOM 155 N3 DG A 7 18.104 -0.796 25.545 1.00 6.58 N ATOM 156 C4 DG A 7 17.046 -0.744 24.705 1.00 8.86 C ATOM 157 H1 DG A 7 18.621 2.409 25.428 1.00 -0.48 H ATOM 158 H21 DG A 7 20.062 -0.282 27.037 1.00 0.54 H ATOM 159 H22 DG A 7 20.065 1.445 26.761 1.00 1.09 H ATOM 160 P DG A 8 13.622 -4.729 27.967 1.00 13.18 P ATOM 161 OP1 DG A 8 13.394 -5.938 28.784 1.00 19.66 O ATOM 162 OP2 DG A 8 12.486 -3.834 27.630 1.00 15.17 O ATOM 163 O5' DG A 8 14.744 -3.862 28.679 1.00 14.95 O ATOM 164 C5' DG A 8 14.398 -2.765 29.536 1.00 12.43 C ATOM 165 C4' DG A 8 15.641 -1.972 29.857 1.00 14.30 C ATOM 166 O4' DG A 8 16.218 -1.475 28.635 1.00 11.37 O ATOM 167 C3' DG A 8 15.453 -0.745 30.733 1.00 15.04 C ATOM 168 O3' DG A 8 15.484 -1.116 32.113 1.00 16.48 O ATOM 169 C2' DG A 8 16.684 0.061 30.380 1.00 13.73 C ATOM 170 C1' DG A 8 16.824 -0.208 28.884 1.00 13.57 C ATOM 171 N9 DG A 8 16.151 0.789 28.058 1.00 13.22 N ATOM 172 C8 DG A 8 15.077 0.608 27.216 1.00 10.00 C ATOM 173 N7 DG A 8 14.732 1.699 26.587 1.00 3.41 N ATOM 174 C5 DG A 8 15.628 2.657 27.048 1.00 6.86 C ATOM 175 C6 DG A 8 15.763 4.029 26.718 1.00 7.58 C ATOM 176 O6 DG A 8 15.093 4.698 25.921 1.00 15.10 O ATOM 177 N1 DG A 8 16.808 4.627 27.417 1.00 5.98 N ATOM 178 C2 DG A 8 17.617 3.985 28.322 1.00 5.06 C ATOM 179 N2 DG A 8 18.573 4.723 28.892 1.00 4.15 N ATOM 180 N3 DG A 8 17.499 2.713 28.642 1.00 6.09 N ATOM 181 C4 DG A 8 16.497 2.113 27.967 1.00 8.70 C ATOM 182 H1 DG A 8 16.977 5.608 27.249 1.00 -0.37 H ATOM 183 H21 DG A 8 19.198 4.303 29.564 1.00 -1.31 H ATOM 184 H22 DG A 8 18.671 5.699 28.651 1.00 -0.47 H ATOM 185 P DT A 9 14.633 -0.275 33.178 1.00 16.60 P ATOM 186 OP1 DT A 9 14.604 -1.033 34.451 1.00 21.64 O ATOM 187 OP2 DT A 9 13.358 0.131 32.534 1.00 17.29 O ATOM 188 O5' DT A 9 15.509 1.033 33.407 1.00 20.09 O ATOM 189 C5' DT A 9 16.829 0.944 33.971 1.00 17.60 C ATOM 190 C4' DT A 9 17.458 2.315 34.025 1.00 14.16 C ATOM 191 O4' DT A 9 17.588 2.836 32.689 1.00 14.03 O ATOM 192 C3' DT A 9 16.594 3.319 34.765 1.00 17.72 C ATOM 193 O3' DT A 9 16.940 3.294 36.155 1.00 23.99 O ATOM 194 C2' DT A 9 17.009 4.629 34.126 1.00 14.15 C ATOM 195 C1' DT A 9 17.311 4.235 32.685 1.00 13.03 C ATOM 196 N1 DT A 9 16.229 4.484 31.710 1.00 11.86 N ATOM 197 C2 DT A 9 16.223 5.694 31.046 1.00 11.27 C ATOM 198 O2 DT A 9 17.025 6.584 31.269 1.00 10.38 O ATOM 199 N3 DT A 9 15.235 5.823 30.105 1.00 11.43 N ATOM 200 C4 DT A 9 14.273 4.893 29.776 1.00 10.66 C ATOM 201 O4 DT A 9 13.476 5.137 28.878 1.00 19.24 O ATOM 202 C5 DT A 9 14.307 3.667 30.541 1.00 8.58 C ATOM 203 C7 DT A 9 13.271 2.621 30.279 1.00 3.81 C ATOM 204 C6 DT A 9 15.271 3.524 31.456 1.00 10.82 C ATOM 205 H3 DT A 9 15.206 6.695 29.596 1.00 -0.14 H ATOM 206 P DC A 10 15.834 3.668 37.262 1.00 29.15 P ATOM 207 OP1 DC A 10 16.460 3.493 38.598 1.00 34.10 O ATOM 208 OP2 DC A 10 14.573 2.951 36.942 1.00 28.05 O ATOM 209 O5' DC A 10 15.596 5.224 37.042 1.00 24.96 O ATOM 210 C5' DC A 10 16.640 6.163 37.331 1.00 23.04 C ATOM 211 C4' DC A 10 16.272 7.531 36.805 1.00 20.09 C ATOM 212 O4' DC A 10 16.288 7.552 35.365 1.00 15.61 O ATOM 213 C3' DC A 10 14.889 8.025 37.194 1.00 19.99 C ATOM 214 O3' DC A 10 14.849 8.509 38.548 1.00 18.36 O ATOM 215 C2' DC A 10 14.633 9.075 36.131 1.00 17.70 C ATOM 216 C1' DC A 10 15.363 8.533 34.901 1.00 13.61 C ATOM 217 N1 DC A 10 14.473 7.904 33.919 1.00 10.50 N ATOM 218 C2 DC A 10 14.091 8.645 32.810 1.00 8.79 C ATOM 219 O2 DC A 10 14.536 9.791 32.681 1.00 12.66 O ATOM 220 N3 DC A 10 13.245 8.103 31.907 1.00 11.23 N ATOM 221 C4 DC A 10 12.779 6.867 32.092 1.00 8.63 C ATOM 222 N4 DC A 10 11.927 6.382 31.190 1.00 7.04 N ATOM 223 C5 DC A 10 13.164 6.078 33.211 1.00 8.82 C ATOM 224 C6 DC A 10 14.011 6.629 34.092 1.00 10.53 C ATOM 225 HO3' DC A 10 13.956 8.819 38.715 1.00 -1.18 H ATOM 226 H41 DC A 10 11.589 5.437 31.285 1.00 3.12 H ATOM 227 H42 DC A 10 11.619 6.947 30.414 1.00 -0.85 H TER 228 DC A 10 HETATM 229 O HOH A 11 15.084 4.232 19.813 0.92 17.79 O HETATM 230 H1 HOH A 11 14.509 3.560 20.181 1.00 2.20 H HETATM 231 H2 HOH A 11 14.672 4.477 18.985 1.00 -3.70 H HETATM 232 O HOH A 12 8.633 -5.205 20.617 0.92 19.91 O HETATM 233 H1 HOH A 12 7.748 -5.548 20.739 1.00 0.52 H HETATM 234 H2 HOH A 12 9.126 -5.929 20.236 1.00 -0.19 H HETATM 235 O HOH A 13 12.832 3.510 35.090 0.92 12.43 O HETATM 236 H1 HOH A 13 12.323 3.313 34.303 1.00 0.34 H HETATM 237 H2 HOH A 13 13.428 2.767 35.184 1.00 -2.35 H HETATM 238 O HOH A 14 25.078 10.081 16.137 0.92 14.98 O HETATM 239 H1 HOH A 14 24.928 10.949 16.513 1.00 -0.15 H HETATM 240 H2 HOH A 14 25.109 9.498 16.895 1.00 0.42 H HETATM 241 O HOH A 15 9.991 -4.605 26.139 0.92 20.73 O HETATM 242 H1 HOH A 15 9.685 -4.683 27.045 1.00 1.05 H HETATM 243 H2 HOH A 15 9.315 -5.036 25.620 1.00 3.78 H HETATM 244 O HOH A 16 12.977 2.543 17.987 0.92 24.71 O HETATM 245 H1 HOH A 16 13.532 1.993 18.541 1.00 -1.76 H HETATM 246 H2 HOH A 16 13.529 3.292 17.762 1.00 -1.61 H HETATM 247 O HOH A 17 19.767 1.402 30.209 0.92 14.79 O HETATM 248 H1 HOH A 17 19.637 2.085 30.867 1.00 -3.35 H HETATM 249 H2 HOH A 17 20.447 0.839 30.578 1.00 0.18 H HETATM 250 O HOH A 18 13.290 1.860 22.372 0.92 21.52 O HETATM 251 H1 HOH A 18 14.004 1.380 22.791 1.00 0.09 H HETATM 252 H2 HOH A 18 13.587 2.770 22.355 1.00 2.28 H HETATM 253 O HOH A 19 9.092 -3.545 15.066 0.92 29.78 O HETATM 254 H1 HOH A 19 9.704 -2.996 14.579 1.00 1.80 H HETATM 255 H2 HOH A 19 9.123 -3.205 15.962 1.00 -0.80 H HETATM 256 O HOH A 20 11.347 -0.301 20.759 0.92 22.64 O HETATM 257 H1 HOH A 20 11.438 0.541 20.315 1.00 -1.22 H HETATM 258 H2 HOH A 20 11.295 -0.945 20.052 1.00 0.80 H HETATM 259 O HOH A 21 19.866 0.048 32.722 0.92 40.84 O HETATM 260 H1 HOH A 21 20.802 0.025 32.925 1.00 0.23 H HETATM 261 H2 HOH A 21 19.441 -0.331 33.490 1.00 -0.27 H HETATM 262 O HOH A 22 10.434 2.601 28.103 0.92 36.31 O HETATM 263 H1 HOH A 22 10.686 3.217 28.792 1.00 2.55 H HETATM 264 H2 HOH A 22 9.581 2.267 28.376 1.00 -0.52 H HETATM 265 O HOH A 23 15.670 1.222 11.204 0.92 38.36 O HETATM 266 H1 HOH A 23 15.191 0.549 11.687 1.00 -1.02 H HETATM 267 H2 HOH A 23 16.568 1.158 11.531 1.00 0.11 H HETATM 268 O HOH A 24 12.633 -1.288 26.556 0.92 18.82 O HETATM 269 H1 HOH A 24 12.536 -0.798 25.740 1.00 1.10 H HETATM 270 H2 HOH A 24 12.478 -2.201 26.313 1.00 1.08 H HETATM 271 O HOH A 25 16.750 17.104 15.219 0.92 13.67 O HETATM 272 H1 HOH A 25 17.225 17.932 15.137 1.00 -0.19 H HETATM 273 H2 HOH A 25 17.407 16.484 15.535 1.00 1.43 H HETATM 274 O HOH A 26 11.183 -0.661 24.128 0.92 14.09 O HETATM 275 H1 HOH A 26 11.354 0.278 24.192 1.00 -0.32 H HETATM 276 H2 HOH A 26 11.050 -0.942 25.033 1.00 -0.66 H HETATM 277 O HOH A 27 20.912 4.065 31.343 0.92 17.55 O HETATM 278 H1 HOH A 27 20.209 3.767 30.764 1.00 -1.40 H HETATM 279 H2 HOH A 27 21.619 3.435 31.202 1.00 -0.91 H HETATM 280 O HOH A 28 17.680 7.449 9.662 0.92 34.97 O HETATM 281 H1 HOH A 28 17.544 6.604 10.095 1.00 -1.64 H HETATM 282 H2 HOH A 28 18.556 7.373 9.286 1.00 0.34 H HETATM 283 O HOH A 29 10.361 4.046 31.687 0.92 21.54 O HETATM 284 H1 HOH A 29 11.035 4.285 32.323 1.00 -2.32 H HETATM 285 H2 HOH A 29 10.851 3.733 30.928 1.00 3.17 H HETATM 286 O HOH A 30 5.775 3.565 32.021 0.92 54.10 O HETATM 287 H1 HOH A 30 5.777 4.522 32.044 1.00 -0.85 H HETATM 288 H2 HOH A 30 5.775 3.348 31.089 1.00 0.36 H HETATM 289 O HOH A 31 19.894 12.183 9.431 0.92 35.18 O HETATM 290 H1 HOH A 31 20.562 11.820 10.003 1.00 -0.52 H HETATM 291 H2 HOH A 31 19.153 11.588 9.542 1.00 1.51 H HETATM 292 O HOH A 32 31.037 13.244 19.339 0.92 32.52 O HETATM 293 H1 HOH A 32 30.100 13.238 19.139 1.00 -0.50 H HETATM 294 H2 HOH A 32 31.241 12.329 19.531 1.00 1.17 H HETATM 295 O HOH A 33 11.558 -0.240 29.036 0.92 30.11 O HETATM 296 H1 HOH A 33 10.955 0.323 28.550 1.00 -0.33 H HETATM 297 H2 HOH A 33 11.635 -1.030 28.501 1.00 -2.52 H HETATM 298 O HOH A 35 15.976 11.888 34.322 0.92 13.69 O HETATM 299 H1 HOH A 35 15.850 11.760 35.266 1.00 1.96 H HETATM 300 H2 HOH A 35 15.715 11.048 33.941 1.00 -0.38 H HETATM 301 O HOH A 37 13.420 7.005 40.225 0.92 10.34 O HETATM 302 H1 HOH A 37 14.089 7.225 40.873 1.00 -0.69 H HETATM 303 H2 HOH A 37 12.710 7.624 40.394 1.00 -3.25 H HETATM 304 O HOH A 38 17.284 -2.500 35.916 0.92 37.92 O HETATM 305 H1 HOH A 38 18.133 -2.832 35.624 1.00 3.16 H HETATM 306 H2 HOH A 38 16.878 -2.147 35.126 1.00 1.24 H HETATM 307 O HOH A 39 20.933 3.007 34.529 0.92 49.67 O HETATM 308 H1 HOH A 39 20.827 2.704 35.430 1.00 2.93 H HETATM 309 H2 HOH A 39 21.823 2.751 34.287 1.00 -0.06 H HETATM 310 O HOH A 40 10.697 7.276 11.276 0.92 23.22 O HETATM 311 H1 HOH A 40 10.550 6.505 11.825 1.00 1.08 H HETATM 312 H2 HOH A 40 11.123 7.906 11.857 1.00 -0.06 H HETATM 313 O HOH A 41 23.494 14.870 8.728 0.92 19.82 O HETATM 314 H1 HOH A 41 23.653 15.799 8.907 1.00 1.41 H HETATM 315 H2 HOH A 41 22.746 14.866 8.128 1.00 -3.30 H HETATM 316 O HOH A 42 12.066 11.232 12.195 0.96 36.07 O HETATM 317 H1 HOH A 42 11.248 11.727 12.164 1.00 -2.80 H HETATM 318 H2 HOH A 42 12.250 11.149 13.132 1.00 0.23 H HETATM 319 O HOH A 43 26.672 12.712 18.951 0.96 42.39 O HETATM 320 H1 HOH A 43 27.559 13.063 18.900 1.00 0.23 H HETATM 321 H2 HOH A 43 26.468 12.449 18.052 1.00 -3.65 H HETATM 322 O HOH A 44 14.854 11.227 19.213 0.96 36.50 O HETATM 323 H1 HOH A 44 14.000 11.658 19.156 1.00 3.66 H HETATM 324 H2 HOH A 44 14.988 11.082 20.149 1.00 1.26 H HETATM 325 O HOH A 45 10.696 7.159 17.758 0.99 54.36 O HETATM 326 H1 HOH A 45 9.772 7.043 17.554 1.00 0.66 H HETATM 327 H2 HOH A 45 10.864 6.465 18.396 1.00 0.14 H HETATM 328 O HOH A 46 15.287 13.783 18.124 0.99 32.92 O HETATM 329 H1 HOH A 46 15.021 14.146 17.276 1.00 -1.45 H HETATM 330 H2 HOH A 46 16.242 13.801 18.095 1.00 1.68 H MASTER 235 0 0 0 0 0 0 6 236 1 0 1 END