0.006747 0.000000 0.001340 0.000000 0.022712 0.000000 0.000000 0.000000 0.021387 0.00000 0.00000 0.00000 Schulze, J.O. Lopez-Garcia, L.A. Froehner, W. Zhang, H. Navratil, J. Hindie, V. Zeuzem, S. Alzari, P.M. Neimanis, S. Engel, M. Biondi, R.M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 101.23 90.00 148.210 44.030 47.670 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C10 H16 N5 O13 P3 507.181 ADENOSINE-5'-TRIPHOSPHATE non-polymer C17 H13 Cl3 N2 O2 383.656 (3S)-3-(4-CHLOROPHENYL)-4-(5,7-DICHLORO-1H-BENZIMIDAZOL-2-YL)BUTANOIC ACID non-polymer Cl -1 35.453 CHLORIDE ION non-polymer C3 H7 N O2 S2 153.223 n S-MERCAPTOCYSTEINE L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Mg 2 24.305 MAGNESIUM ION non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H8 N O6 P 185.072 n PHOSPHOSERINE PHOSPHONOSERINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N P N 75 N O N 76 N O N 77 N O N 78 R P N 79 N O N 80 N O N 81 N O N 82 R P N 83 N O N 84 N O N 85 N O N 86 N O N 87 N C N 88 R C N 89 N O N 90 S C N 91 N O N 92 R C N 93 N O N 94 R C Y 95 N N Y 96 N C Y 97 N N Y 98 N C Y 99 N C N 100 N N Y 101 N N Y 102 N C Y 103 N N Y 104 N C N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N CL Y 122 N C Y 123 N C Y 124 N C N 125 N CL Y 126 N C Y 127 N C Y 128 N N Y 129 N C Y 130 N N Y 131 N C N 132 N C N 133 S C N 134 N C N 135 N C N 136 N O N 137 N O Y 138 N C Y 139 N C Y 140 N C Y 141 N C N 142 N CL Y 143 N C Y 144 N C N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N CL N 159 N N N 160 R C N 161 N C N 162 N S N 163 N S N 164 N C N 165 N O N 166 N O N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N N N 175 R C N 176 N C N 177 N O N 178 N C N 179 N S N 180 N O N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N N N 189 S C N 190 N C N 191 N O N 192 N C N 193 N C N 194 N C N 195 N O N 196 N N N 197 N O N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N N N 209 S C N 210 N C N 211 N O N 212 N C N 213 N C N 214 N C N 215 N O N 216 N O N 217 N O N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N N N 228 N C N 229 N C N 230 N O N 231 N O N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N N N 238 S C N 239 N C N 240 N O N 241 N C Y 242 N C Y 243 N N Y 244 N C Y 245 N C Y 246 N N N 247 N O N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N O N 259 N H N 260 N H N 261 N N N 262 S C N 263 N C N 264 N O N 265 S C N 266 N C N 267 N C N 268 N C N 269 N O N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N N N 284 S C N 285 N C N 286 N O N 287 N C N 288 N C N 289 N C N 290 N C N 291 N O N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N N N 306 S C N 307 N C N 308 N O N 309 N C N 310 N C N 311 N C N 312 N C N 313 N N N 314 N O N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N N N 331 S C N 332 N C N 333 N O N 334 N C N 335 N C N 336 N S N 337 N C N 338 N O N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N MG N 351 N N N 352 S C N 353 N C N 354 N O N 355 N C Y 356 N C Y 357 N C Y 358 N C Y 359 N C Y 360 N C Y 361 N C N 362 N O N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N N N 375 S C N 376 N C N 377 N O N 378 N C N 379 N C N 380 N C N 381 N O N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N N N 392 S C N 393 N C N 394 N O N 395 N C N 396 N O N 397 N O N 398 N P N 399 N O N 400 N O N 401 N O N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N N N 411 S C N 412 N C N 413 N O N 414 N C N 415 N O N 416 N O N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N N N 425 S C N 426 N C N 427 N O N 428 R C N 429 N O N 430 N C N 431 N O N 432 N H N 433 N H N 434 N H N 435 N H N 436 N H N 437 N H N 438 N H N 439 N H N 440 N H N 441 N N N 442 S C N 443 N C N 444 N O N 445 N C Y 446 N C Y 447 N C Y 448 N C Y 449 N N Y 450 N C Y 451 N C Y 452 N C Y 453 N C Y 454 N C N 455 N O N 456 N H N 457 N H N 458 N H N 459 N H N 460 N H N 461 N H N 462 N H N 463 N H N 464 N H N 465 N H N 466 N H N 467 N H N 468 N N N 469 S C N 470 N C N 471 N O N 472 N C Y 473 N C Y 474 N C Y 475 N C Y 476 N C Y 477 N C Y 478 N C N 479 N O N 480 N O N 481 N H N 482 N H N 483 N H N 484 N H N 485 N H N 486 N H N 487 N H N 488 N H N 489 N H N 490 N H N 491 N H N 492 N N N 493 S C N 494 N C N 495 N O N 496 N C N 497 N C N 498 N C N 499 N O N 500 N H N 501 N H N 502 N H N 503 N H N 504 N H N 505 N H N 506 N H N 507 N H N 508 N H N 509 N H N 510 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N doub N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N doub N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing Y 104 N sing Y 105 N sing Y 106 N doub N 107 N sing Y 108 N sing Y 109 N sing Y 110 N doub N 111 N sing Y 112 N doub N 113 N sing N 114 N sing Y 115 N sing Y 116 N doub N 117 N sing Y 118 N sing N 119 N sing Y 120 N sing Y 121 N doub Y 122 N doub N 123 N sing Y 124 N sing Y 125 N sing Y 126 N sing Y 127 N doub Y 128 N doub Y 129 N sing N 130 N sing Y 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N doub N 137 N sing Y 138 N sing Y 139 N doub Y 140 N doub Y 141 N sing N 142 N sing Y 143 N doub Y 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N doub N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N doub N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N doub N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N doub N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N doub N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N doub N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N doub N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N doub N 238 N sing N 239 N sing N 240 N sing N 241 N sing Y 242 N sing Y 243 N doub Y 244 N doub N 245 N sing Y 246 N sing N 247 N sing Y 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N doub N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N doub N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N doub N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N doub N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N doub N 346 N sing N 347 N sing N 348 N sing N 349 N sing Y 350 N doub Y 351 N sing Y 352 N sing N 353 N sing Y 354 N doub N 355 N sing Y 356 N doub N 357 N sing Y 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N doub N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N doub N 390 N sing N 391 N sing N 392 N doub N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N doub N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N doub N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N doub N 433 N sing N 434 N sing N 435 N sing N 436 N sing Y 437 N doub Y 438 N sing Y 439 N sing N 440 N sing Y 441 N doub Y 442 N sing Y 443 N sing N 444 N sing Y 445 N sing Y 446 N doub N 447 N sing Y 448 N doub N 449 N sing Y 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N doub N 461 N sing N 462 N sing N 463 N sing N 464 N sing Y 465 N doub Y 466 N sing Y 467 N sing N 468 N sing Y 469 N doub N 470 N sing Y 471 N doub N 472 N sing Y 473 N sing N 474 N sing N 475 N sing N 476 N sing N 477 N sing N 478 N sing N 479 N sing N 480 N sing N 481 N sing N 482 N sing N 483 N sing N 484 N doub N 485 N sing N 486 N sing N 487 N sing N 488 N sing N 489 N sing N 490 N sing N 491 N sing N 492 N sing N 493 N sing N 494 N sing N 495 N sing UK Chem.Biol. CBOLE2 2050 1074-5521 18 1463 10.1016/J.CHEMBIOL.2011.08.010 22118680 Allosteric Regulation of Protein Kinase Pkczeta by the N-Terminal C1 Domain and Small Compounds to the Pif-Pocket. 2011 10.2210/pdb4a07/pdb pdb_00004a07 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 MIRRORS CCD 2009-12-04 RAYONIX SINGLE WAVELENGTH M x-ray 1 0.9999 1.0 X06DA SLS 0.9999 SYNCHROTRON SLS BEAMLINE X06DA 35424.629 3-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1 2.7.11.1 CATALYTIC DOMAIN, RESIDUES 50-359 YES 1 man polymer 507.181 ADENOSINE-5'-TRIPHOSPHATE 1 syn non-polymer 383.656 (3S)-3-(4-CHLOROPHENYL)-4-(5,7-DICHLORO-1H-BENZIMIDAZOL-2-YL)BUTANOIC ACID 2 syn non-polymer 24.305 MAGNESIUM ION 1 syn non-polymer 35.453 CHLORIDE ION 5 syn non-polymer 18.015 water 209 nat water HPDK1 no yes GAMDGTAAEPRPGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP ENILLNEDMHIQITDFGTAKVLSPESKQARAN(SEP)FVGTAQYVSPELLTEKSA(CSS)KSSDLWALGCIIYQLVAGLP PFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKLT GAMDGTAAEPRPGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP ENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEG LIFAKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKLT A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n HUMAN FALL ARMYWORM sample 9606 HOMO SAPIENS SF9 7108 SPODOPTERA FRUGIPERDA PFASTBAC BACULOVIRUS 1 2.3 47 NONE 7.5 1.2 M NA CITRATE 0.1 M HEPES PH 7.5 10 M DTT. chem_comp_atom chem_comp_bond database_2 pdbx_database_status pdbx_initial_refinement_model pdbx_struct_conn_angle struct_conn struct_site repository Initial release Other Data collection Database references Derived calculations Other Refinement description 1 0 2011-12-07 1 1 2011-12-21 1 2 2023-12-20 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.status_code_sf _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id HIGH RESOLUTION CRYSTAL STRUCTURE OF THE HUMAN PDK1 CATALYTIC DOMAIN STRUCTURE OF HUMAN PDK1 KINASE DOMAIN IN COMPLEX WITH LY333531 CRYSTAL STRUCTURE OF THE PDK1 PLECKSTRIN HOMOLOGY (PH) DOMAIN BOUND TO DIC4-PHOSPHATIDYLINOSITOL (3,4,5)- TRISPHOSPHATE CRYSTAL STRUCTURE OF THE PDK1 PLECKSTRIN HOMOLOGY (PH) DOMAIN STRUCTURE OF PDK1-S241A MUTANT KINASE DOMAIN STRUCTURE OF HUMAN PDK1 KINASE DOMAIN IN COMPLEX WITH BIM-1 STRUCTURE OF HUMAN PDK1 KINASE DOMAIN IN COMPLEX WITH STAUROSPORINE STRUCTURE OF HUMAN PDK1 KINASE DOMAIN IN COMPLEX WITH BIM-3 CRYSTAL STRUCTURE OF N1-[3-[[5-BROMO-2-[[3-[(1- PYRROLIDINYLCARBONYL)AMINO]PHENYL]AMINO]-4-PYRIMIDINYL] AMINO]PROPYL]-2,2-DIMETHYLPROPANEDIAMIDECOMPLEXED WITH HUMAN PDK1 STRUCTURE OF HUMAN PDK1 KINASE DOMAIN IN COMPLEX WITH UCN-01 CRYSTAL STRUCTURE OF THE PDK1 PLECKSTRIN HOMOLOGY (PH) DOMAIN BOUND TO INOSITOL (1,3,4,5)-TETRAKISPHOSPHATE CRYSTAL STRUCTURE OF PDK1 IN COMPLEX WITH A PYRAZOLOQUINAZOLINE INHIBITOR STRUCTURE OF THE PDK1 PH DOMAIN K465E MUTANT CRYSTAL STRUCTURE OF PDK1 IN COMPLEX WITH A PYRAZOLOQUINAZOLINE INHIBITOR STRUCTURE OF HUMAN PDK1 KINASE DOMAIN IN COMPLEX WITH BIM-2 STRUCTURE OF HUMAN PDK1 KINASE DOMAIN IN COMPLEX WITH BIM-8 HUMAN PDK1 KINASE DOMAIN IN COMPLEX WITH ALLOSTERIC ACTIVATOR PS114 BOUND TO THE PIF-POCKET HELIX DETERMINATION METHOD: AUTHOR PROVIDED. SHEET DETERMINATION METHOD: AUTHOR PROVIDED. PDBE Y PDBE 2011-09-08 REL REL 1 A O HOH 2035 6.32 1 A O HOH 2040 6.35 1 A O HOH 2110 6.11 ATP ADENOSINE-5'-TRIPHOSPHATE AZ7 (3S)-3-(4-CHLOROPHENYL)-4-(5,7-DICHLORO-1H-BENZIMIDAZOL-2-YL)BUTANOIC ACID MG MAGNESIUM ION CL CHLORIDE ION HOH water ENGINEERED RESIDUE IN CHAIN A, GLN 288 TO ALA ENGINEERED RESIDUE IN CHAIN A, TYR 292 TO GLY PS171 (AZ7): ALLOSTERIC ACTIVATOR PS171 3HRC PDB ENTRY 3HRC PDB experimental model ATP 500 2 ATP ATP 500 A AZ7 600 3 AZ7 AZ7 600 A AZ7 700 3 AZ7 AZ7 700 A MG 800 4 MG MG 800 A CL 850 5 CL CL 850 A CL 860 5 CL CL 860 A CL 870 5 CL CL 870 A CL 880 5 CL CL 880 A CL 890 5 CL CL 890 A HOH 2001 6 HOH HOH 2001 A HOH 2002 6 HOH HOH 2002 A HOH 2003 6 HOH HOH 2003 A HOH 2004 6 HOH HOH 2004 A HOH 2005 6 HOH HOH 2005 A HOH 2006 6 HOH HOH 2006 A HOH 2007 6 HOH HOH 2007 A HOH 2008 6 HOH HOH 2008 A HOH 2009 6 HOH HOH 2009 A HOH 2010 6 HOH HOH 2010 A HOH 2011 6 HOH HOH 2011 A HOH 2012 6 HOH HOH 2012 A HOH 2013 6 HOH HOH 2013 A HOH 2014 6 HOH HOH 2014 A HOH 2015 6 HOH HOH 2015 A HOH 2016 6 HOH HOH 2016 A HOH 2017 6 HOH HOH 2017 A HOH 2018 6 HOH HOH 2018 A HOH 2019 6 HOH HOH 2019 A HOH 2020 6 HOH HOH 2020 A HOH 2021 6 HOH HOH 2021 A HOH 2022 6 HOH HOH 2022 A HOH 2023 6 HOH HOH 2023 A HOH 2024 6 HOH HOH 2024 A HOH 2025 6 HOH HOH 2025 A HOH 2026 6 HOH HOH 2026 A HOH 2027 6 HOH HOH 2027 A HOH 2028 6 HOH HOH 2028 A HOH 2029 6 HOH HOH 2029 A HOH 2030 6 HOH HOH 2030 A HOH 2031 6 HOH HOH 2031 A HOH 2032 6 HOH HOH 2032 A HOH 2033 6 HOH HOH 2033 A HOH 2034 6 HOH HOH 2034 A HOH 2035 6 HOH HOH 2035 A HOH 2036 6 HOH HOH 2036 A HOH 2037 6 HOH HOH 2037 A HOH 2038 6 HOH HOH 2038 A HOH 2039 6 HOH HOH 2039 A HOH 2040 6 HOH HOH 2040 A HOH 2041 6 HOH HOH 2041 A HOH 2042 6 HOH HOH 2042 A HOH 2043 6 HOH HOH 2043 A HOH 2044 6 HOH HOH 2044 A HOH 2045 6 HOH HOH 2045 A HOH 2046 6 HOH HOH 2046 A HOH 2047 6 HOH HOH 2047 A HOH 2048 6 HOH HOH 2048 A HOH 2049 6 HOH HOH 2049 A HOH 2050 6 HOH HOH 2050 A HOH 2051 6 HOH HOH 2051 A HOH 2052 6 HOH HOH 2052 A HOH 2053 6 HOH HOH 2053 A HOH 2054 6 HOH HOH 2054 A HOH 2055 6 HOH HOH 2055 A HOH 2056 6 HOH HOH 2056 A HOH 2057 6 HOH HOH 2057 A HOH 2058 6 HOH HOH 2058 A HOH 2059 6 HOH HOH 2059 A HOH 2060 6 HOH HOH 2060 A HOH 2061 6 HOH HOH 2061 A HOH 2062 6 HOH HOH 2062 A HOH 2063 6 HOH HOH 2063 A HOH 2064 6 HOH HOH 2064 A HOH 2065 6 HOH HOH 2065 A HOH 2066 6 HOH HOH 2066 A HOH 2067 6 HOH HOH 2067 A HOH 2068 6 HOH HOH 2068 A HOH 2069 6 HOH HOH 2069 A HOH 2070 6 HOH HOH 2070 A HOH 2071 6 HOH HOH 2071 A HOH 2072 6 HOH HOH 2072 A HOH 2073 6 HOH HOH 2073 A HOH 2074 6 HOH HOH 2074 A HOH 2075 6 HOH HOH 2075 A HOH 2076 6 HOH HOH 2076 A HOH 2077 6 HOH HOH 2077 A HOH 2078 6 HOH HOH 2078 A HOH 2079 6 HOH HOH 2079 A HOH 2080 6 HOH HOH 2080 A HOH 2081 6 HOH HOH 2081 A HOH 2082 6 HOH HOH 2082 A HOH 2083 6 HOH HOH 2083 A HOH 2084 6 HOH HOH 2084 A HOH 2085 6 HOH HOH 2085 A HOH 2086 6 HOH HOH 2086 A HOH 2087 6 HOH HOH 2087 A HOH 2088 6 HOH HOH 2088 A HOH 2089 6 HOH HOH 2089 A HOH 2090 6 HOH HOH 2090 A HOH 2091 6 HOH HOH 2091 A HOH 2092 6 HOH HOH 2092 A HOH 2093 6 HOH HOH 2093 A HOH 2094 6 HOH HOH 2094 A HOH 2095 6 HOH HOH 2095 A HOH 2096 6 HOH HOH 2096 A HOH 2097 6 HOH HOH 2097 A HOH 2098 6 HOH HOH 2098 A HOH 2099 6 HOH HOH 2099 A HOH 2100 6 HOH HOH 2100 A HOH 2101 6 HOH HOH 2101 A HOH 2102 6 HOH HOH 2102 A HOH 2103 6 HOH HOH 2103 A HOH 2104 6 HOH HOH 2104 A HOH 2105 6 HOH HOH 2105 A HOH 2106 6 HOH HOH 2106 A HOH 2107 6 HOH HOH 2107 A HOH 2108 6 HOH HOH 2108 A HOH 2109 6 HOH HOH 2109 A HOH 2110 6 HOH HOH 2110 A HOH 2111 6 HOH HOH 2111 A HOH 2112 6 HOH HOH 2112 A HOH 2113 6 HOH HOH 2113 A HOH 2114 6 HOH HOH 2114 A HOH 2115 6 HOH HOH 2115 A HOH 2116 6 HOH HOH 2116 A HOH 2117 6 HOH HOH 2117 A HOH 2118 6 HOH HOH 2118 A HOH 2119 6 HOH HOH 2119 A HOH 2120 6 HOH HOH 2120 A HOH 2121 6 HOH HOH 2121 A HOH 2122 6 HOH HOH 2122 A HOH 2123 6 HOH HOH 2123 A HOH 2124 6 HOH HOH 2124 A HOH 2125 6 HOH HOH 2125 A HOH 2126 6 HOH HOH 2126 A HOH 2127 6 HOH HOH 2127 A HOH 2128 6 HOH HOH 2128 A HOH 2129 6 HOH HOH 2129 A HOH 2130 6 HOH HOH 2130 A HOH 2131 6 HOH HOH 2131 A HOH 2132 6 HOH HOH 2132 A HOH 2133 6 HOH HOH 2133 A HOH 2134 6 HOH HOH 2134 A HOH 2135 6 HOH HOH 2135 A HOH 2136 6 HOH HOH 2136 A HOH 2137 6 HOH HOH 2137 A HOH 2138 6 HOH HOH 2138 A HOH 2139 6 HOH HOH 2139 A HOH 2140 6 HOH HOH 2140 A HOH 2141 6 HOH HOH 2141 A HOH 2142 6 HOH HOH 2142 A HOH 2143 6 HOH HOH 2143 A HOH 2144 6 HOH HOH 2144 A HOH 2145 6 HOH HOH 2145 A HOH 2146 6 HOH HOH 2146 A HOH 2147 6 HOH HOH 2147 A HOH 2148 6 HOH HOH 2148 A HOH 2149 6 HOH HOH 2149 A HOH 2150 6 HOH HOH 2150 A HOH 2151 6 HOH HOH 2151 A HOH 2152 6 HOH HOH 2152 A HOH 2153 6 HOH HOH 2153 A HOH 2154 6 HOH HOH 2154 A HOH 2155 6 HOH HOH 2155 A HOH 2156 6 HOH HOH 2156 A HOH 2157 6 HOH HOH 2157 A HOH 2158 6 HOH HOH 2158 A HOH 2159 6 HOH HOH 2159 A HOH 2160 6 HOH HOH 2160 A HOH 2161 6 HOH HOH 2161 A HOH 2162 6 HOH HOH 2162 A HOH 2163 6 HOH HOH 2163 A HOH 2164 6 HOH HOH 2164 A HOH 2165 6 HOH HOH 2165 A HOH 2166 6 HOH HOH 2166 A HOH 2167 6 HOH HOH 2167 A HOH 2168 6 HOH HOH 2168 A HOH 2169 6 HOH HOH 2169 A HOH 2170 6 HOH HOH 2170 A HOH 2171 6 HOH HOH 2171 A HOH 2172 6 HOH HOH 2172 A HOH 2173 6 HOH HOH 2173 A HOH 2174 6 HOH HOH 2174 A HOH 2175 6 HOH HOH 2175 A HOH 2176 6 HOH HOH 2176 A HOH 2177 6 HOH HOH 2177 A HOH 2178 6 HOH HOH 2178 A HOH 2179 6 HOH HOH 2179 A HOH 2180 6 HOH HOH 2180 A HOH 2181 6 HOH HOH 2181 A HOH 2182 6 HOH HOH 2182 A HOH 2183 6 HOH HOH 2183 A HOH 2184 6 HOH HOH 2184 A HOH 2185 6 HOH HOH 2185 A HOH 2186 6 HOH HOH 2186 A HOH 2187 6 HOH HOH 2187 A HOH 2188 6 HOH HOH 2188 A HOH 2189 6 HOH HOH 2189 A HOH 2190 6 HOH HOH 2190 A HOH 2191 6 HOH HOH 2191 A HOH 2192 6 HOH HOH 2192 A HOH 2193 6 HOH HOH 2193 A HOH 2194 6 HOH HOH 2194 A HOH 2195 6 HOH HOH 2195 A HOH 2196 6 HOH HOH 2196 A HOH 2197 6 HOH HOH 2197 A HOH 2198 6 HOH HOH 2198 A HOH 2199 6 HOH HOH 2199 A HOH 2200 6 HOH HOH 2200 A HOH 2201 6 HOH HOH 2201 A HOH 2202 6 HOH HOH 2202 A HOH 2203 6 HOH HOH 2203 A HOH 2204 6 HOH HOH 2204 A HOH 2205 6 HOH HOH 2205 A HOH 2206 6 HOH HOH 2206 A HOH 2207 6 HOH HOH 2207 A HOH 2208 6 HOH HOH 2208 A HOH 2209 6 HOH HOH 2209 A n 1 49 A n 2 50 A n 3 51 A n 4 52 A n 5 53 A n 6 54 A n 7 55 A n 8 56 A n 9 57 A n 10 58 A n 11 59 A n 12 60 A n 13 61 A n 14 62 A n 15 63 A n 16 64 A n 17 65 A n 18 66 A n 19 67 A n 20 68 A n 21 69 A n 22 70 A n 23 71 A n 24 72 A n 25 73 A n 26 74 A ARG 75 n 27 ARG 75 A LYS 76 n 28 LYS 76 A LYS 77 n 29 LYS 77 A ARG 78 n 30 ARG 78 A PRO 79 n 31 PRO 79 A GLU 80 n 32 GLU 80 A ASP 81 n 33 ASP 81 A PHE 82 n 34 PHE 82 A LYS 83 n 35 LYS 83 A PHE 84 n 36 PHE 84 A GLY 85 n 37 GLY 85 A LYS 86 n 38 LYS 86 A ILE 87 n 39 ILE 87 A LEU 88 n 40 LEU 88 A GLY 89 n 41 GLY 89 A GLU 90 n 42 GLU 90 A GLY 91 n 43 GLY 91 A SER 92 n 44 SER 92 A PHE 93 n 45 PHE 93 A SER 94 n 46 SER 94 A THR 95 n 47 THR 95 A VAL 96 n 48 VAL 96 A VAL 97 n 49 VAL 97 A LEU 98 n 50 LEU 98 A ALA 99 n 51 ALA 99 A ARG 100 n 52 ARG 100 A GLU 101 n 53 GLU 101 A LEU 102 n 54 LEU 102 A ALA 103 n 55 ALA 103 A THR 104 n 56 THR 104 A SER 105 n 57 SER 105 A ARG 106 n 58 ARG 106 A GLU 107 n 59 GLU 107 A TYR 108 n 60 TYR 108 A ALA 109 n 61 ALA 109 A ILE 110 n 62 ILE 110 A LYS 111 n 63 LYS 111 A ILE 112 n 64 ILE 112 A LEU 113 n 65 LEU 113 A GLU 114 n 66 GLU 114 A LYS 115 n 67 LYS 115 A ARG 116 n 68 ARG 116 A HIS 117 n 69 HIS 117 A ILE 118 n 70 ILE 118 A ILE 119 n 71 ILE 119 A LYS 120 n 72 LYS 120 A GLU 121 n 73 GLU 121 A ASN 122 n 74 ASN 122 A LYS 123 n 75 LYS 123 A VAL 124 n 76 VAL 124 A PRO 125 n 77 PRO 125 A TYR 126 n 78 TYR 126 A VAL 127 n 79 VAL 127 A THR 128 n 80 THR 128 A ARG 129 n 81 ARG 129 A GLU 130 n 82 GLU 130 A ARG 131 n 83 ARG 131 A ASP 132 n 84 ASP 132 A VAL 133 n 85 VAL 133 A MET 134 n 86 MET 134 A SER 135 n 87 SER 135 A ARG 136 n 88 ARG 136 A LEU 137 n 89 LEU 137 A ASP 138 n 90 ASP 138 A HIS 139 n 91 HIS 139 A PRO 140 n 92 PRO 140 A PHE 141 n 93 PHE 141 A PHE 142 n 94 PHE 142 A VAL 143 n 95 VAL 143 A LYS 144 n 96 LYS 144 A LEU 145 n 97 LEU 145 A TYR 146 n 98 TYR 146 A PHE 147 n 99 PHE 147 A THR 148 n 100 THR 148 A PHE 149 n 101 PHE 149 A GLN 150 n 102 GLN 150 A ASP 151 n 103 ASP 151 A ASP 152 n 104 ASP 152 A GLU 153 n 105 GLU 153 A LYS 154 n 106 LYS 154 A LEU 155 n 107 LEU 155 A TYR 156 n 108 TYR 156 A PHE 157 n 109 PHE 157 A GLY 158 n 110 GLY 158 A LEU 159 n 111 LEU 159 A SER 160 n 112 SER 160 A TYR 161 n 113 TYR 161 A ALA 162 n 114 ALA 162 A LYS 163 n 115 LYS 163 A ASN 164 n 116 ASN 164 A GLY 165 n 117 GLY 165 A GLU 166 n 118 GLU 166 A LEU 167 n 119 LEU 167 A LEU 168 n 120 LEU 168 A LYS 169 n 121 LYS 169 A TYR 170 n 122 TYR 170 A ILE 171 n 123 ILE 171 A ARG 172 n 124 ARG 172 A LYS 173 n 125 LYS 173 A ILE 174 n 126 ILE 174 A GLY 175 n 127 GLY 175 A SER 176 n 128 SER 176 A PHE 177 n 129 PHE 177 A ASP 178 n 130 ASP 178 A GLU 179 n 131 GLU 179 A THR 180 n 132 THR 180 A CYS 181 n 133 CYS 181 A THR 182 n 134 THR 182 A ARG 183 n 135 ARG 183 A PHE 184 n 136 PHE 184 A TYR 185 n 137 TYR 185 A THR 186 n 138 THR 186 A ALA 187 n 139 ALA 187 A GLU 188 n 140 GLU 188 A ILE 189 n 141 ILE 189 A VAL 190 n 142 VAL 190 A SER 191 n 143 SER 191 A ALA 192 n 144 ALA 192 A LEU 193 n 145 LEU 193 A GLU 194 n 146 GLU 194 A TYR 195 n 147 TYR 195 A LEU 196 n 148 LEU 196 A HIS 197 n 149 HIS 197 A GLY 198 n 150 GLY 198 A LYS 199 n 151 LYS 199 A GLY 200 n 152 GLY 200 A ILE 201 n 153 ILE 201 A ILE 202 n 154 ILE 202 A HIS 203 n 155 HIS 203 A ARG 204 n 156 ARG 204 A ASP 205 n 157 ASP 205 A LEU 206 n 158 LEU 206 A LYS 207 n 159 LYS 207 A PRO 208 n 160 PRO 208 A GLU 209 n 161 GLU 209 A ASN 210 n 162 ASN 210 A ILE 211 n 163 ILE 211 A LEU 212 n 164 LEU 212 A LEU 213 n 165 LEU 213 A ASN 214 n 166 ASN 214 A GLU 215 n 167 GLU 215 A ASP 216 n 168 ASP 216 A MET 217 n 169 MET 217 A HIS 218 n 170 HIS 218 A ILE 219 n 171 ILE 219 A GLN 220 n 172 GLN 220 A ILE 221 n 173 ILE 221 A THR 222 n 174 THR 222 A ASP 223 n 175 ASP 223 A PHE 224 n 176 PHE 224 A GLY 225 n 177 GLY 225 A THR 226 n 178 THR 226 A ALA 227 n 179 ALA 227 A LYS 228 n 180 LYS 228 A VAL 229 n 181 VAL 229 A LEU 230 n 182 LEU 230 A SER 231 n 183 SER 231 A PRO 232 n 184 PRO 232 A GLU 233 n 185 GLU 233 A SER 234 n 186 SER 234 A LYS 235 n 187 LYS 235 A GLN 236 n 188 GLN 236 A ALA 237 n 189 ALA 237 A ARG 238 n 190 ARG 238 A ALA 239 n 191 ALA 239 A ASN 240 n 192 ASN 240 A SEP 241 n 193 SEP 241 A PHE 242 n 194 PHE 242 A VAL 243 n 195 VAL 243 A GLY 244 n 196 GLY 244 A THR 245 n 197 THR 245 A ALA 246 n 198 ALA 246 A GLN 247 n 199 GLN 247 A TYR 248 n 200 TYR 248 A VAL 249 n 201 VAL 249 A SER 250 n 202 SER 250 A PRO 251 n 203 PRO 251 A GLU 252 n 204 GLU 252 A LEU 253 n 205 LEU 253 A LEU 254 n 206 LEU 254 A THR 255 n 207 THR 255 A GLU 256 n 208 GLU 256 A LYS 257 n 209 LYS 257 A SER 258 n 210 SER 258 A ALA 259 n 211 ALA 259 A CSS 260 n 212 CSS 260 A LYS 261 n 213 LYS 261 A SER 262 n 214 SER 262 A SER 263 n 215 SER 263 A ASP 264 n 216 ASP 264 A LEU 265 n 217 LEU 265 A TRP 266 n 218 TRP 266 A ALA 267 n 219 ALA 267 A LEU 268 n 220 LEU 268 A GLY 269 n 221 GLY 269 A CYS 270 n 222 CYS 270 A ILE 271 n 223 ILE 271 A ILE 272 n 224 ILE 272 A TYR 273 n 225 TYR 273 A GLN 274 n 226 GLN 274 A LEU 275 n 227 LEU 275 A VAL 276 n 228 VAL 276 A ALA 277 n 229 ALA 277 A GLY 278 n 230 GLY 278 A LEU 279 n 231 LEU 279 A PRO 280 n 232 PRO 280 A PRO 281 n 233 PRO 281 A PHE 282 n 234 PHE 282 A ARG 283 n 235 ARG 283 A ALA 284 n 236 ALA 284 A GLY 285 n 237 GLY 285 A ASN 286 n 238 ASN 286 A GLU 287 n 239 GLU 287 A GLY 288 n 240 GLY 288 A LEU 289 n 241 LEU 289 A ILE 290 n 242 ILE 290 A PHE 291 n 243 PHE 291 A ALA 292 n 244 ALA 292 A LYS 293 n 245 LYS 293 A ILE 294 n 246 ILE 294 A ILE 295 n 247 ILE 295 A LYS 296 n 248 LYS 296 A LEU 297 n 249 LEU 297 A GLU 298 n 250 GLU 298 A TYR 299 n 251 TYR 299 A ASP 300 n 252 ASP 300 A PHE 301 n 253 PHE 301 A PRO 302 n 254 PRO 302 A GLU 303 n 255 GLU 303 A LYS 304 n 256 LYS 304 A PHE 305 n 257 PHE 305 A PHE 306 n 258 PHE 306 A PRO 307 n 259 PRO 307 A LYS 308 n 260 LYS 308 A ALA 309 n 261 ALA 309 A ARG 310 n 262 ARG 310 A ASP 311 n 263 ASP 311 A LEU 312 n 264 LEU 312 A VAL 313 n 265 VAL 313 A GLU 314 n 266 GLU 314 A LYS 315 n 267 LYS 315 A LEU 316 n 268 LEU 316 A LEU 317 n 269 LEU 317 A VAL 318 n 270 VAL 318 A LEU 319 n 271 LEU 319 A ASP 320 n 272 ASP 320 A ALA 321 n 273 ALA 321 A THR 322 n 274 THR 322 A LYS 323 n 275 LYS 323 A ARG 324 n 276 ARG 324 A LEU 325 n 277 LEU 325 A GLY 326 n 278 GLY 326 A CYS 327 n 279 CYS 327 A GLU 328 n 280 GLU 328 A GLU 329 n 281 GLU 329 A MET 330 n 282 MET 330 A GLU 331 n 283 GLU 331 A GLY 332 n 284 GLY 332 A TYR 333 n 285 TYR 333 A GLY 334 n 286 GLY 334 A PRO 335 n 287 PRO 335 A LEU 336 n 288 LEU 336 A LYS 337 n 289 LYS 337 A ALA 338 n 290 ALA 338 A HIS 339 n 291 HIS 339 A PRO 340 n 292 PRO 340 A PHE 341 n 293 PHE 341 A PHE 342 n 294 PHE 342 A GLU 343 n 295 GLU 343 A SER 344 n 296 SER 344 A VAL 345 n 297 VAL 345 A THR 346 n 298 THR 346 A TRP 347 n 299 TRP 347 A GLU 348 n 300 GLU 348 A ASN 349 n 301 ASN 349 A LEU 350 n 302 LEU 350 A HIS 351 n 303 HIS 351 A GLN 352 n 304 GLN 352 A GLN 353 n 305 GLN 353 A THR 354 n 306 THR 354 A PRO 355 n 307 PRO 355 A PRO 356 n 308 PRO 356 A LYS 357 n 309 LYS 357 A LEU 358 n 310 LEU 358 A THR 359 n 311 THR 359 A 2.2946 2.1782 0.3919 3.0799 0.2411 1.2532 0.1267 0.1656 0.2069 -0.1657 -0.1322 0.3011 0.0217 -0.2107 -0.0108 0.1035 0.0301 -0.0186 0.2100 0.0383 0.1040 refined -8.9155 24.5124 -16.1908 X-RAY DIFFRACTION 0.1087 -0.0676 -0.2482 0.2667 0.6424 1.7499 0.0038 0.1490 0.0186 -0.0325 -0.0548 -0.0423 -0.1162 0.1632 0.0649 0.0679 0.0353 -0.0078 0.2026 0.0330 0.0451 refined -7.0933 25.6663 -13.9567 X-RAY DIFFRACTION 2.7577 -0.8262 0.3122 0.7096 0.4908 1.2012 0.4634 0.2953 -0.0720 -0.1464 -0.3111 0.1598 -0.1858 -0.3181 -0.1038 0.1836 0.0708 0.0153 0.2365 0.0169 0.1795 refined -16.3009 34.6489 -4.4123 X-RAY DIFFRACTION 0.2466 -0.0376 0.2395 0.8801 -0.1431 1.8736 -0.0294 0.0382 0.1257 -0.0345 -0.0186 -0.0981 -0.3676 -0.0402 0.0318 0.1305 -0.0176 0.0066 0.1274 0.0246 0.0846 refined -7.3568 26.4935 -3.8426 X-RAY DIFFRACTION 0.1774 -0.2215 -0.1141 1.6271 -0.2707 0.3156 0.1054 0.0784 0.1141 -0.1855 -0.2508 -0.0112 -0.0251 0.0800 0.1082 0.1243 0.0286 -0.0029 0.1502 0.0202 0.0818 refined -10.1863 24.5599 -11.3339 X-RAY DIFFRACTION 0.9127 0.2792 0.1013 0.6244 0.3643 0.7323 -0.0536 0.0098 -0.1106 0.0386 0.0786 -0.0661 0.0474 0.0707 -0.0455 0.0687 0.0022 -0.0046 0.0762 -0.0088 0.0860 refined -19.9033 14.8809 5.6810 X-RAY DIFFRACTION 1.0562 -0.7376 -0.3602 1.4892 -0.0978 0.8670 -0.0161 0.0827 0.1239 -0.0445 0.0051 -0.2400 -0.1653 0.0702 0.0257 0.0890 -0.0239 -0.0120 0.1233 0.0001 0.0835 refined -17.0034 25.1392 4.0766 X-RAY DIFFRACTION 0.8448 0.0684 -0.0952 0.2345 -0.0341 0.6407 -0.0518 -0.0193 0.1327 -0.0204 0.0149 0.1823 -0.1357 0.0414 0.0408 0.0909 0.0053 -0.0225 0.0645 0.0086 0.1002 refined -30.7921 22.6065 6.5538 X-RAY DIFFRACTION 0.8385 -0.1800 0.2514 1.0455 -0.1479 0.8777 -0.0333 -0.1049 -0.1236 0.0976 0.0100 0.2432 0.1060 -0.0920 0.0156 0.0895 -0.0088 0.0267 0.0738 0.0053 0.1253 refined -35.1779 15.5200 11.3834 X-RAY DIFFRACTION 0.5906 0.3334 -0.1286 1.7423 -0.6438 0.2723 0.1264 -0.1155 0.0688 0.4545 -0.1383 -0.0460 -0.2071 0.1377 0.0372 0.1817 0.0111 -0.0528 0.1537 -0.0022 0.0460 refined -21.5162 22.2326 21.2906 X-RAY DIFFRACTION 0.8660 0.2832 -0.5420 0.8243 -0.1312 2.1632 -0.3661 -0.0517 -0.4256 0.1317 0.0964 -0.3349 0.4486 0.2868 0.1476 0.1738 0.0407 -0.0008 0.1675 0.0175 0.1966 refined -13.1227 8.9633 14.2790 X-RAY DIFFRACTION X-RAY DIFFRACTION 1 (CHAIN A AND RESID 75:99) X-RAY DIFFRACTION 2 (CHAIN A AND RESID 100:117) X-RAY DIFFRACTION 3 (CHAIN A AND RESID 118:138) X-RAY DIFFRACTION 4 (CHAIN A AND RESID 139:151) X-RAY DIFFRACTION 5 (CHAIN A AND RESID 152:165) X-RAY DIFFRACTION 6 (CHAIN A AND RESID 166:208) X-RAY DIFFRACTION 7 (CHAIN A AND RESID 209:238) X-RAY DIFFRACTION 8 (CHAIN A AND RESID 239:283) X-RAY DIFFRACTION 9 (CHAIN A AND RESID 284:325) X-RAY DIFFRACTION 10 (CHAIN A AND RESID 326:338) X-RAY DIFFRACTION 11 (CHAIN A AND RESID 339:357) author_and_software_defined_assembly PISA 1 monomeric A ASP 223 A OD1 ASP 175 1_555 A MG 800 E MG MG 1_555 A ATP 500 B O1A ATP 1_555 155.3 A ASP 223 A OD1 ASP 175 1_555 A MG 800 E MG MG 1_555 A ATP 500 B O2B ATP 1_555 107.5 A ATP 500 B O1A ATP 1_555 A MG 800 E MG MG 1_555 A ATP 500 B O2B ATP 1_555 82.2 A SEP 241 PHOSPHOSERINE A SEP 193 SER A CSS 260 S-MERCAPTOCYSTEINE A CSS 212 CYS 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N GLY 85 A N GLY 37 A O LEU 98 A O LEU 50 A N VAL 97 A N VAL 49 A O ILE 110 A O ILE 62 A N ALA 109 A N ALA 61 A O LEU 159 A O LEU 111 A O GLY 158 A O GLY 110 A N PHE 147 A N PHE 99 A N GLY 165 A N GLY 117 A O LEU 213 A O LEU 165 A N LEU 212 A N LEU 164 A O GLN 220 A O GLN 172 A N ILE 202 A N ILE 154 A O LYS 228 A O LYS 180 1 A N ARG 75 A N ARG 27 1 Y 1 A CA ARG 75 A CA ARG 27 1 Y 1 A CB ARG 75 A CB ARG 27 1 Y 1 A CG ARG 75 A CG ARG 27 1 Y 1 A CD ARG 75 A CD ARG 27 1 Y 1 A NE ARG 75 A NE ARG 27 1 Y 1 A CZ ARG 75 A CZ ARG 27 1 Y 1 A NH1 ARG 75 A NH1 ARG 27 1 Y 1 A NH2 ARG 75 A NH2 ARG 27 1 Y 1 A CD ARG 78 A CD ARG 30 1 Y 1 A NE ARG 78 A NE ARG 30 1 Y 1 A CZ ARG 78 A CZ ARG 30 1 Y 1 A NH1 ARG 78 A NH1 ARG 30 1 Y 1 A NH2 ARG 78 A NH2 ARG 30 1 Y 1 A CE LYS 83 A CE LYS 35 1 Y 1 A NZ LYS 83 A NZ LYS 35 1 Y 1 A CD ARG 100 A CD ARG 52 1 Y 1 A NE ARG 100 A NE ARG 52 1 Y 1 A CZ ARG 100 A CZ ARG 52 1 Y 1 A NH1 ARG 100 A NH1 ARG 52 1 Y 1 A NH2 ARG 100 A NH2 ARG 52 1 Y 1 A CG ARG 116 A CG ARG 68 1 Y 1 A CD ARG 116 A CD ARG 68 1 Y 1 A NE ARG 116 A NE ARG 68 1 Y 1 A CZ ARG 116 A CZ ARG 68 1 Y 1 A NH1 ARG 116 A NH1 ARG 68 1 Y 1 A NH2 ARG 116 A NH2 ARG 68 1 Y 1 A CG LYS 120 A CG LYS 72 1 Y 1 A CD LYS 120 A CD LYS 72 1 Y 1 A CE LYS 120 A CE LYS 72 1 Y 1 A NZ LYS 120 A NZ LYS 72 1 Y 1 A CE LYS 144 A CE LYS 96 1 Y 1 A NZ LYS 144 A NZ LYS 96 1 Y 1 A CD GLU 153 A CD GLU 105 1 Y 1 A OE1 GLU 153 A OE1 GLU 105 1 Y 1 A OE2 GLU 153 A OE2 GLU 105 1 Y 1 A CD LYS 163 A CD LYS 115 1 Y 1 A CE LYS 163 A CE LYS 115 1 Y 1 A NZ LYS 163 A NZ LYS 115 1 Y 1 A NE ARG 172 A NE ARG 124 1 Y 1 A CZ ARG 172 A CZ ARG 124 1 Y 1 A NH1 ARG 172 A NH1 ARG 124 1 Y 1 A NH2 ARG 172 A NH2 ARG 124 1 Y 1 A CD LYS 173 A CD LYS 125 1 Y 1 A CE LYS 173 A CE LYS 125 1 Y 1 A NZ LYS 173 A NZ LYS 125 1 Y 1 A CE LYS 199 A CE LYS 151 1 Y 1 A NZ LYS 199 A NZ LYS 151 1 Y 1 A CD GLU 215 A CD GLU 167 1 Y 1 A OE1 GLU 215 A OE1 GLU 167 1 Y 1 A OE2 GLU 215 A OE2 GLU 167 1 Y 1 A CE LYS 235 A CE LYS 187 1 Y 1 A NZ LYS 235 A NZ LYS 187 1 Y 1 A NE ARG 238 A NE ARG 190 1 Y 1 A CZ ARG 238 A CZ ARG 190 1 Y 1 A NH1 ARG 238 A NH1 ARG 190 1 Y 1 A NH2 ARG 238 A NH2 ARG 190 1 Y 1 A NZ LYS 257 A NZ LYS 209 1 Y 1 A CE LYS 323 A CE LYS 275 1 Y 1 A NZ LYS 323 A NZ LYS 275 1 Y 1 A CD GLU 343 A CD GLU 295 1 Y 1 A OE1 GLU 343 A OE1 GLU 295 1 Y 1 A OE2 GLU 343 A OE2 GLU 295 1 Y 1 A CG ASN 349 A CG ASN 301 1 Y 1 A OD1 ASN 349 A OD1 ASN 301 1 Y 1 A ND2 ASN 349 A ND2 ASN 301 1 Y 1 A CD GLN 352 A CD GLN 304 1 Y 1 A OE1 GLN 352 A OE1 GLN 304 1 Y 1 A NE2 GLN 352 A NE2 GLN 304 1 Y 1 A CG LYS 357 A CG LYS 309 1 Y 1 A CD LYS 357 A CD LYS 309 1 Y 1 A CE LYS 357 A CE LYS 309 1 Y 1 A NZ LYS 357 A NZ LYS 309 1 Y 1 A C THR 359 A C THR 311 1 Y 1 A O THR 359 A O THR 311 1 Y 1 A CB THR 359 A CB THR 311 1 Y 1 A OG1 THR 359 A OG1 THR 311 1 Y 1 A CG2 THR 359 A CG2 THR 311 1 Y 1 A GLY 49 A GLY 1 1 Y 1 A ALA 50 A ALA 2 1 Y 1 A MET 51 A MET 3 1 Y 1 A ASP 52 A ASP 4 1 Y 1 A GLY 53 A GLY 5 1 Y 1 A THR 54 A THR 6 1 Y 1 A ALA 55 A ALA 7 1 Y 1 A ALA 56 A ALA 8 1 Y 1 A GLU 57 A GLU 9 1 Y 1 A PRO 58 A PRO 10 1 Y 1 A ARG 59 A ARG 11 1 Y 1 A PRO 60 A PRO 12 1 Y 1 A GLY 61 A GLY 13 1 Y 1 A ALA 62 A ALA 14 1 Y 1 A GLY 63 A GLY 15 1 Y 1 A SER 64 A SER 16 1 Y 1 A LEU 65 A LEU 17 1 Y 1 A GLN 66 A GLN 18 1 Y 1 A HIS 67 A HIS 19 1 Y 1 A ALA 68 A ALA 20 1 Y 1 A GLN 69 A GLN 21 1 Y 1 A PRO 70 A PRO 22 1 Y 1 A PRO 71 A PRO 23 1 Y 1 A PRO 72 A PRO 24 1 Y 1 A GLN 73 A GLN 25 1 Y 1 A PRO 74 A PRO 26 1 Y 1 A C11 AZ7 600 WRONG HAND 1 A A HG1 HG THR SER 180 231 1.05 1_555 1_545 1 A ASP 138 -150.58 61.79 1 A ASP 151 -125.31 -161.31 1 A ARG 204 80.07 -12.14 1 A ASP 223 76.01 72.40 -0.5851 0.0000 -1.4489 0.2149 0.0000 0.3702 0.1997 0.1588 0.1609 1.85 36.242 1292 25850 5.0 99.37 0.19 1 2.00 MOLECULAR REPLACEMENT 18.42 0.89 1.00 PDB ENTRY 3HRC ML FLAT BULK SOLVENT MODEL 40.291 0.426 1.85 36.242 209 2534 85 0 2240 0.008 2417 1.090 3308 13.644 884 0.074 356 0.005 409 0.2768 0.2261 1.9240 141 2670 99.00 0.2160 0.1833 2.0115 141 2692 99.00 0.2333 0.1565 2.1176 142 2692 99.00 0.1799 0.1467 2.2502 143 2717 99.00 0.1845 0.1432 2.4239 143 2722 99.00 0.2038 0.1544 2.6678 144 2740 100.00 0.2193 0.1587 3.0536 144 2723 100.00 0.1776 0.1534 3.8466 145 2762 100.00 0.1883 0.1556 36.2486 149 2840 100.00 16.59 1.85 47.00 4A07 25852 2.8 0.10 1 15.50 4.6 99.3 0.72 1.85 1.95 2.80 1 4.6 98.9 refinement PHENIX (PHENIX.REFINE) data reduction XDS data scaling XSCALE phasing PHASER Human PDK1 Kinase Domain in Complex with Allosteric Activator PS171 Bound to the PIF-Pocket 1 N N 2 N N 3 N N 3 N N 4 N N 5 N N 5 N N 5 N N 5 N N 5 N N 6 N N A LYS 115 A LYS 67 HELX_P A GLU 121 A GLU 73 1 1 7 A LYS 123 A LYS 75 HELX_P A SER 135 A SER 87 1 2 13 A LEU 167 A LEU 119 HELX_P A ILE 174 A ILE 126 1 3 8 A GLU 179 A GLU 131 HELX_P A LYS 199 A LYS 151 1 4 21 A PRO 251 A PRO 203 HELX_P A GLU 256 A GLU 208 1 5 6 A SER 262 A SER 214 HELX_P A ALA 277 A ALA 229 1 6 16 A GLU 287 A GLU 239 HELX_P A ILE 295 A ILE 247 1 7 9 A PRO 307 A PRO 259 HELX_P A LEU 316 A LEU 268 1 8 10 A TYR 333 A TYR 285 HELX_P A ALA 338 A ALA 290 1 9 6 covale 1.326 both A ASN 240 A C ASN 192 1_555 A SEP 241 A N SEP 193 1_555 covale 1.326 both A SEP 241 A C SEP 193 1_555 A PHE 242 A N PHE 194 1_555 covale 1.327 both A ALA 259 A C ALA 211 1_555 A CSS 260 A N CSS 212 1_555 covale 1.331 both A CSS 260 A C CSS 212 1_555 A LYS 261 A N LYS 213 1_555 metalc 2.206 A ASP 223 A OD1 ASP 175 1_555 A MG 800 E MG MG 1_555 metalc 2.317 A ATP 500 B O1A ATP 1_555 A MG 800 E MG MG 1_555 metalc 2.276 A ATP 500 B O2B ATP 1_555 A MG 800 E MG MG 1_555 TRANSFERASE TRANSFERASE, ALLOSTERIC SITE PDPK1_HUMAN UNP 1 O15530 50 359 4A07 50 359 O15530 A 1 2 311 1 expression tag GLY 49 4A07 A O15530 UNP 1 1 TYR engineered mutation GLY 288 4A07 A O15530 UNP 288 240 1 GLN engineered mutation ALA 292 4A07 A O15530 UNP 292 244 5 3 2 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A PHE 82 A PHE 34 A GLY 91 A GLY 43 A SER 94 A SER 46 A GLU 101 A GLU 53 A ARG 106 A ARG 58 A GLU 114 A GLU 66 A LYS 154 A LYS 106 A LEU 159 A LEU 111 A PHE 147 A PHE 99 A ASP 151 A ASP 103 A GLY 165 A GLY 117 A GLU 166 A GLU 118 A ILE 211 A ILE 163 A ASN 214 A ASN 166 A HIS 218 A HIS 170 A ILE 221 A ILE 173 A ILE 201 A ILE 153 A ILE 202 A ILE 154 A LYS 228 A LYS 180 A VAL 229 A VAL 181 BINDING SITE FOR RESIDUE ATP A 500 A ATP 500 Software 18 BINDING SITE FOR RESIDUE AZ7 A 600 A AZ7 600 Software 9 BINDING SITE FOR RESIDUE AZ7 A 700 A AZ7 700 Software 11 BINDING SITE FOR RESIDUE MG A 800 A MG 800 Software 3 BINDING SITE FOR RESIDUE CL A 860 A CL 860 Software 1 BINDING SITE FOR RESIDUE CL A 870 A CL 870 Software 1 BINDING SITE FOR RESIDUE CL A 890 A CL 890 Software 2 A GLY 89 A GLY 41 18 1_555 A GLY 91 A GLY 43 18 1_555 A SER 92 A SER 44 18 1_555 A SER 94 A SER 46 18 1_555 A VAL 96 A VAL 48 18 1_555 A ALA 109 A ALA 61 18 1_555 A LYS 111 A LYS 63 18 1_555 A SER 160 A SER 112 18 1_555 A ALA 162 A ALA 114 18 1_555 A GLU 166 A GLU 118 18 1_555 A LEU 212 A LEU 164 18 1_555 A ASP 223 A ASP 175 18 1_555 A MG 800 E MG 18 1_555 A HOH 2019 K HOH 18 1_555 A HOH 2128 K HOH 18 1_555 A HOH 2131 K HOH 18 1_555 A HOH 2132 K HOH 18 1_555 A HOH 2209 K HOH 18 1_555 A LYS 76 A LYS 28 9 1_555 A LYS 115 A LYS 67 9 1_555 A ILE 119 A ILE 71 9 1_555 A VAL 124 A VAL 76 9 1_555 A ARG 131 A ARG 83 9 1_555 A THR 148 A THR 100 9 1_555 A GLN 150 A GLN 102 9 1_555 A LEU 155 A LEU 107 9 1_555 A PHE 157 A PHE 109 9 1_555 A LEU 168 A LEU 120 11 1_555 A ARG 172 A ARG 124 11 1_555 A PHE 242 A PHE 194 11 4_445 A LEU 253 A LEU 205 11 4_445 A LEU 254 A LEU 206 11 4_445 A LYS 257 A LYS 209 11 4_445 A GLN 274 A GLN 226 11 1_555 A GLY 278 A GLY 230 11 1_555 A PHE 282 A PHE 234 11 1_555 A ARG 283 A ARG 235 11 1_555 A PHE 291 A PHE 243 11 4_445 A LYS 111 A LYS 63 3 1_555 A ASP 223 A ASP 175 3 1_555 A ATP 500 B ATP 3 1_555 A ASP 311 A ASP 263 1 1_555 A LEU 350 A LEU 302 1 1_555 A LYS 169 A LYS 121 2 1_555 A TYR 170 A TYR 122 2 1_555 5 C 1 2 1