0.006747
0.000000
0.001340
0.000000
0.022712
0.000000
0.000000
0.000000
0.021387
0.00000
0.00000
0.00000
Schulze, J.O.
Lopez-Garcia, L.A.
Froehner, W.
Zhang, H.
Navratil, J.
Hindie, V.
Zeuzem, S.
Alzari, P.M.
Neimanis, S.
Engel, M.
Biondi, R.M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
101.23
90.00
148.210
44.030
47.670
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C10 H16 N5 O13 P3
507.181
ADENOSINE-5'-TRIPHOSPHATE
non-polymer
C17 H13 Cl3 N2 O2
383.656
(3S)-3-(4-CHLOROPHENYL)-4-(5,7-DICHLORO-1H-BENZIMIDAZOL-2-YL)BUTANOIC ACID
non-polymer
Cl -1
35.453
CHLORIDE ION
non-polymer
C3 H7 N O2 S2
153.223
n
S-MERCAPTOCYSTEINE
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Mg 2
24.305
MAGNESIUM ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H8 N O6 P
185.072
n
PHOSPHOSERINE
PHOSPHONOSERINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
P
N
75
N
O
N
76
N
O
N
77
N
O
N
78
R
P
N
79
N
O
N
80
N
O
N
81
N
O
N
82
R
P
N
83
N
O
N
84
N
O
N
85
N
O
N
86
N
O
N
87
N
C
N
88
R
C
N
89
N
O
N
90
S
C
N
91
N
O
N
92
R
C
N
93
N
O
N
94
R
C
Y
95
N
N
Y
96
N
C
Y
97
N
N
Y
98
N
C
Y
99
N
C
N
100
N
N
Y
101
N
N
Y
102
N
C
Y
103
N
N
Y
104
N
C
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
CL
Y
122
N
C
Y
123
N
C
Y
124
N
C
N
125
N
CL
Y
126
N
C
Y
127
N
C
Y
128
N
N
Y
129
N
C
Y
130
N
N
Y
131
N
C
N
132
N
C
N
133
S
C
N
134
N
C
N
135
N
C
N
136
N
O
N
137
N
O
Y
138
N
C
Y
139
N
C
Y
140
N
C
Y
141
N
C
N
142
N
CL
Y
143
N
C
Y
144
N
C
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
CL
N
159
N
N
N
160
R
C
N
161
N
C
N
162
N
S
N
163
N
S
N
164
N
C
N
165
N
O
N
166
N
O
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
N
N
175
R
C
N
176
N
C
N
177
N
O
N
178
N
C
N
179
N
S
N
180
N
O
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
N
N
189
S
C
N
190
N
C
N
191
N
O
N
192
N
C
N
193
N
C
N
194
N
C
N
195
N
O
N
196
N
N
N
197
N
O
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
N
N
209
S
C
N
210
N
C
N
211
N
O
N
212
N
C
N
213
N
C
N
214
N
C
N
215
N
O
N
216
N
O
N
217
N
O
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
N
N
228
N
C
N
229
N
C
N
230
N
O
N
231
N
O
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
N
N
238
S
C
N
239
N
C
N
240
N
O
N
241
N
C
Y
242
N
C
Y
243
N
N
Y
244
N
C
Y
245
N
C
Y
246
N
N
N
247
N
O
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
O
N
259
N
H
N
260
N
H
N
261
N
N
N
262
S
C
N
263
N
C
N
264
N
O
N
265
S
C
N
266
N
C
N
267
N
C
N
268
N
C
N
269
N
O
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
N
N
284
S
C
N
285
N
C
N
286
N
O
N
287
N
C
N
288
N
C
N
289
N
C
N
290
N
C
N
291
N
O
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
N
N
306
S
C
N
307
N
C
N
308
N
O
N
309
N
C
N
310
N
C
N
311
N
C
N
312
N
C
N
313
N
N
N
314
N
O
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
N
N
331
S
C
N
332
N
C
N
333
N
O
N
334
N
C
N
335
N
C
N
336
N
S
N
337
N
C
N
338
N
O
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
MG
N
351
N
N
N
352
S
C
N
353
N
C
N
354
N
O
N
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
Y
359
N
C
Y
360
N
C
Y
361
N
C
N
362
N
O
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
N
N
375
S
C
N
376
N
C
N
377
N
O
N
378
N
C
N
379
N
C
N
380
N
C
N
381
N
O
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
N
N
392
S
C
N
393
N
C
N
394
N
O
N
395
N
C
N
396
N
O
N
397
N
O
N
398
N
P
N
399
N
O
N
400
N
O
N
401
N
O
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
N
N
411
S
C
N
412
N
C
N
413
N
O
N
414
N
C
N
415
N
O
N
416
N
O
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
N
N
425
S
C
N
426
N
C
N
427
N
O
N
428
R
C
N
429
N
O
N
430
N
C
N
431
N
O
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
N
N
442
S
C
N
443
N
C
N
444
N
O
N
445
N
C
Y
446
N
C
Y
447
N
C
Y
448
N
C
Y
449
N
N
Y
450
N
C
Y
451
N
C
Y
452
N
C
Y
453
N
C
Y
454
N
C
N
455
N
O
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
H
N
466
N
H
N
467
N
H
N
468
N
N
N
469
S
C
N
470
N
C
N
471
N
O
N
472
N
C
Y
473
N
C
Y
474
N
C
Y
475
N
C
Y
476
N
C
Y
477
N
C
Y
478
N
C
N
479
N
O
N
480
N
O
N
481
N
H
N
482
N
H
N
483
N
H
N
484
N
H
N
485
N
H
N
486
N
H
N
487
N
H
N
488
N
H
N
489
N
H
N
490
N
H
N
491
N
H
N
492
N
N
N
493
S
C
N
494
N
C
N
495
N
O
N
496
N
C
N
497
N
C
N
498
N
C
N
499
N
O
N
500
N
H
N
501
N
H
N
502
N
H
N
503
N
H
N
504
N
H
N
505
N
H
N
506
N
H
N
507
N
H
N
508
N
H
N
509
N
H
N
510
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
doub
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
doub
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
Y
104
N
sing
Y
105
N
sing
Y
106
N
doub
N
107
N
sing
Y
108
N
sing
Y
109
N
sing
Y
110
N
doub
N
111
N
sing
Y
112
N
doub
N
113
N
sing
N
114
N
sing
Y
115
N
sing
Y
116
N
doub
N
117
N
sing
Y
118
N
sing
N
119
N
sing
Y
120
N
sing
Y
121
N
doub
Y
122
N
doub
N
123
N
sing
Y
124
N
sing
Y
125
N
sing
Y
126
N
sing
Y
127
N
doub
Y
128
N
doub
Y
129
N
sing
N
130
N
sing
Y
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
doub
N
137
N
sing
Y
138
N
sing
Y
139
N
doub
Y
140
N
doub
Y
141
N
sing
N
142
N
sing
Y
143
N
doub
Y
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
doub
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
doub
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
doub
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
doub
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
doub
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
doub
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
doub
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
doub
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
Y
242
N
sing
Y
243
N
doub
Y
244
N
doub
N
245
N
sing
Y
246
N
sing
N
247
N
sing
Y
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
doub
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
doub
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
doub
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
doub
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
doub
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
Y
350
N
doub
Y
351
N
sing
Y
352
N
sing
N
353
N
sing
Y
354
N
doub
N
355
N
sing
Y
356
N
doub
N
357
N
sing
Y
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
doub
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
doub
N
390
N
sing
N
391
N
sing
N
392
N
doub
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
doub
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
doub
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
doub
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
Y
437
N
doub
Y
438
N
sing
Y
439
N
sing
N
440
N
sing
Y
441
N
doub
Y
442
N
sing
Y
443
N
sing
N
444
N
sing
Y
445
N
sing
Y
446
N
doub
N
447
N
sing
Y
448
N
doub
N
449
N
sing
Y
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
doub
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
Y
465
N
doub
Y
466
N
sing
Y
467
N
sing
N
468
N
sing
Y
469
N
doub
N
470
N
sing
Y
471
N
doub
N
472
N
sing
Y
473
N
sing
N
474
N
sing
N
475
N
sing
N
476
N
sing
N
477
N
sing
N
478
N
sing
N
479
N
sing
N
480
N
sing
N
481
N
sing
N
482
N
sing
N
483
N
sing
N
484
N
doub
N
485
N
sing
N
486
N
sing
N
487
N
sing
N
488
N
sing
N
489
N
sing
N
490
N
sing
N
491
N
sing
N
492
N
sing
N
493
N
sing
N
494
N
sing
N
495
N
sing
UK
Chem.Biol.
CBOLE2
2050
1074-5521
18
1463
10.1016/J.CHEMBIOL.2011.08.010
22118680
Allosteric Regulation of Protein Kinase Pkczeta by the N-Terminal C1 Domain and Small Compounds to the Pif-Pocket.
2011
10.2210/pdb4a07/pdb
pdb_00004a07
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
MIRRORS
CCD
2009-12-04
RAYONIX
SINGLE WAVELENGTH
M
x-ray
1
0.9999
1.0
X06DA
SLS
0.9999
SYNCHROTRON
SLS BEAMLINE X06DA
35424.629
3-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1
2.7.11.1
CATALYTIC DOMAIN, RESIDUES 50-359
YES
1
man
polymer
507.181
ADENOSINE-5'-TRIPHOSPHATE
1
syn
non-polymer
383.656
(3S)-3-(4-CHLOROPHENYL)-4-(5,7-DICHLORO-1H-BENZIMIDAZOL-2-YL)BUTANOIC ACID
2
syn
non-polymer
24.305
MAGNESIUM ION
1
syn
non-polymer
35.453
CHLORIDE ION
5
syn
non-polymer
18.015
water
209
nat
water
HPDK1
no
yes
GAMDGTAAEPRPGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT
RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP
ENILLNEDMHIQITDFGTAKVLSPESKQARAN(SEP)FVGTAQYVSPELLTEKSA(CSS)KSSDLWALGCIIYQLVAGLP
PFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKLT
GAMDGTAAEPRPGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT
RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKP
ENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEG
LIFAKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKLT
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
HUMAN
FALL ARMYWORM
sample
9606
HOMO SAPIENS
SF9
7108
SPODOPTERA FRUGIPERDA
PFASTBAC
BACULOVIRUS
1
2.3
47
NONE
7.5
1.2 M NA CITRATE 0.1 M HEPES PH 7.5 10 M DTT.
chem_comp_atom
chem_comp_bond
database_2
pdbx_database_status
pdbx_initial_refinement_model
pdbx_struct_conn_angle
struct_conn
struct_site
repository
Initial release
Other
Data collection
Database references
Derived calculations
Other
Refinement description
1
0
2011-12-07
1
1
2011-12-21
1
2
2023-12-20
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.status_code_sf
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
HIGH RESOLUTION CRYSTAL STRUCTURE OF THE HUMAN PDK1 CATALYTIC DOMAIN
STRUCTURE OF HUMAN PDK1 KINASE DOMAIN IN COMPLEX WITH LY333531
CRYSTAL STRUCTURE OF THE PDK1 PLECKSTRIN HOMOLOGY (PH) DOMAIN BOUND TO DIC4-PHOSPHATIDYLINOSITOL (3,4,5)- TRISPHOSPHATE
CRYSTAL STRUCTURE OF THE PDK1 PLECKSTRIN HOMOLOGY (PH) DOMAIN
STRUCTURE OF PDK1-S241A MUTANT KINASE DOMAIN
STRUCTURE OF HUMAN PDK1 KINASE DOMAIN IN COMPLEX WITH BIM-1
STRUCTURE OF HUMAN PDK1 KINASE DOMAIN IN COMPLEX WITH STAUROSPORINE
STRUCTURE OF HUMAN PDK1 KINASE DOMAIN IN COMPLEX WITH BIM-3
CRYSTAL STRUCTURE OF N1-[3-[[5-BROMO-2-[[3-[(1- PYRROLIDINYLCARBONYL)AMINO]PHENYL]AMINO]-4-PYRIMIDINYL] AMINO]PROPYL]-2,2-DIMETHYLPROPANEDIAMIDECOMPLEXED WITH HUMAN PDK1
STRUCTURE OF HUMAN PDK1 KINASE DOMAIN IN COMPLEX WITH UCN-01
CRYSTAL STRUCTURE OF THE PDK1 PLECKSTRIN HOMOLOGY (PH) DOMAIN BOUND TO INOSITOL (1,3,4,5)-TETRAKISPHOSPHATE
CRYSTAL STRUCTURE OF PDK1 IN COMPLEX WITH A PYRAZOLOQUINAZOLINE INHIBITOR
STRUCTURE OF THE PDK1 PH DOMAIN K465E MUTANT
CRYSTAL STRUCTURE OF PDK1 IN COMPLEX WITH A PYRAZOLOQUINAZOLINE INHIBITOR
STRUCTURE OF HUMAN PDK1 KINASE DOMAIN IN COMPLEX WITH BIM-2
STRUCTURE OF HUMAN PDK1 KINASE DOMAIN IN COMPLEX WITH BIM-8
HUMAN PDK1 KINASE DOMAIN IN COMPLEX WITH ALLOSTERIC ACTIVATOR PS114 BOUND TO THE PIF-POCKET
HELIX
DETERMINATION METHOD: AUTHOR PROVIDED.
SHEET
DETERMINATION METHOD: AUTHOR PROVIDED.
PDBE
Y
PDBE
2011-09-08
REL
REL
1
A
O
HOH
2035
6.32
1
A
O
HOH
2040
6.35
1
A
O
HOH
2110
6.11
ATP
ADENOSINE-5'-TRIPHOSPHATE
AZ7
(3S)-3-(4-CHLOROPHENYL)-4-(5,7-DICHLORO-1H-BENZIMIDAZOL-2-YL)BUTANOIC ACID
MG
MAGNESIUM ION
CL
CHLORIDE ION
HOH
water
ENGINEERED RESIDUE IN CHAIN A, GLN 288 TO ALA
ENGINEERED RESIDUE IN CHAIN A, TYR 292 TO GLY
PS171 (AZ7): ALLOSTERIC ACTIVATOR PS171
3HRC
PDB ENTRY 3HRC
PDB
experimental model
ATP
500
2
ATP
ATP
500
A
AZ7
600
3
AZ7
AZ7
600
A
AZ7
700
3
AZ7
AZ7
700
A
MG
800
4
MG
MG
800
A
CL
850
5
CL
CL
850
A
CL
860
5
CL
CL
860
A
CL
870
5
CL
CL
870
A
CL
880
5
CL
CL
880
A
CL
890
5
CL
CL
890
A
HOH
2001
6
HOH
HOH
2001
A
HOH
2002
6
HOH
HOH
2002
A
HOH
2003
6
HOH
HOH
2003
A
HOH
2004
6
HOH
HOH
2004
A
HOH
2005
6
HOH
HOH
2005
A
HOH
2006
6
HOH
HOH
2006
A
HOH
2007
6
HOH
HOH
2007
A
HOH
2008
6
HOH
HOH
2008
A
HOH
2009
6
HOH
HOH
2009
A
HOH
2010
6
HOH
HOH
2010
A
HOH
2011
6
HOH
HOH
2011
A
HOH
2012
6
HOH
HOH
2012
A
HOH
2013
6
HOH
HOH
2013
A
HOH
2014
6
HOH
HOH
2014
A
HOH
2015
6
HOH
HOH
2015
A
HOH
2016
6
HOH
HOH
2016
A
HOH
2017
6
HOH
HOH
2017
A
HOH
2018
6
HOH
HOH
2018
A
HOH
2019
6
HOH
HOH
2019
A
HOH
2020
6
HOH
HOH
2020
A
HOH
2021
6
HOH
HOH
2021
A
HOH
2022
6
HOH
HOH
2022
A
HOH
2023
6
HOH
HOH
2023
A
HOH
2024
6
HOH
HOH
2024
A
HOH
2025
6
HOH
HOH
2025
A
HOH
2026
6
HOH
HOH
2026
A
HOH
2027
6
HOH
HOH
2027
A
HOH
2028
6
HOH
HOH
2028
A
HOH
2029
6
HOH
HOH
2029
A
HOH
2030
6
HOH
HOH
2030
A
HOH
2031
6
HOH
HOH
2031
A
HOH
2032
6
HOH
HOH
2032
A
HOH
2033
6
HOH
HOH
2033
A
HOH
2034
6
HOH
HOH
2034
A
HOH
2035
6
HOH
HOH
2035
A
HOH
2036
6
HOH
HOH
2036
A
HOH
2037
6
HOH
HOH
2037
A
HOH
2038
6
HOH
HOH
2038
A
HOH
2039
6
HOH
HOH
2039
A
HOH
2040
6
HOH
HOH
2040
A
HOH
2041
6
HOH
HOH
2041
A
HOH
2042
6
HOH
HOH
2042
A
HOH
2043
6
HOH
HOH
2043
A
HOH
2044
6
HOH
HOH
2044
A
HOH
2045
6
HOH
HOH
2045
A
HOH
2046
6
HOH
HOH
2046
A
HOH
2047
6
HOH
HOH
2047
A
HOH
2048
6
HOH
HOH
2048
A
HOH
2049
6
HOH
HOH
2049
A
HOH
2050
6
HOH
HOH
2050
A
HOH
2051
6
HOH
HOH
2051
A
HOH
2052
6
HOH
HOH
2052
A
HOH
2053
6
HOH
HOH
2053
A
HOH
2054
6
HOH
HOH
2054
A
HOH
2055
6
HOH
HOH
2055
A
HOH
2056
6
HOH
HOH
2056
A
HOH
2057
6
HOH
HOH
2057
A
HOH
2058
6
HOH
HOH
2058
A
HOH
2059
6
HOH
HOH
2059
A
HOH
2060
6
HOH
HOH
2060
A
HOH
2061
6
HOH
HOH
2061
A
HOH
2062
6
HOH
HOH
2062
A
HOH
2063
6
HOH
HOH
2063
A
HOH
2064
6
HOH
HOH
2064
A
HOH
2065
6
HOH
HOH
2065
A
HOH
2066
6
HOH
HOH
2066
A
HOH
2067
6
HOH
HOH
2067
A
HOH
2068
6
HOH
HOH
2068
A
HOH
2069
6
HOH
HOH
2069
A
HOH
2070
6
HOH
HOH
2070
A
HOH
2071
6
HOH
HOH
2071
A
HOH
2072
6
HOH
HOH
2072
A
HOH
2073
6
HOH
HOH
2073
A
HOH
2074
6
HOH
HOH
2074
A
HOH
2075
6
HOH
HOH
2075
A
HOH
2076
6
HOH
HOH
2076
A
HOH
2077
6
HOH
HOH
2077
A
HOH
2078
6
HOH
HOH
2078
A
HOH
2079
6
HOH
HOH
2079
A
HOH
2080
6
HOH
HOH
2080
A
HOH
2081
6
HOH
HOH
2081
A
HOH
2082
6
HOH
HOH
2082
A
HOH
2083
6
HOH
HOH
2083
A
HOH
2084
6
HOH
HOH
2084
A
HOH
2085
6
HOH
HOH
2085
A
HOH
2086
6
HOH
HOH
2086
A
HOH
2087
6
HOH
HOH
2087
A
HOH
2088
6
HOH
HOH
2088
A
HOH
2089
6
HOH
HOH
2089
A
HOH
2090
6
HOH
HOH
2090
A
HOH
2091
6
HOH
HOH
2091
A
HOH
2092
6
HOH
HOH
2092
A
HOH
2093
6
HOH
HOH
2093
A
HOH
2094
6
HOH
HOH
2094
A
HOH
2095
6
HOH
HOH
2095
A
HOH
2096
6
HOH
HOH
2096
A
HOH
2097
6
HOH
HOH
2097
A
HOH
2098
6
HOH
HOH
2098
A
HOH
2099
6
HOH
HOH
2099
A
HOH
2100
6
HOH
HOH
2100
A
HOH
2101
6
HOH
HOH
2101
A
HOH
2102
6
HOH
HOH
2102
A
HOH
2103
6
HOH
HOH
2103
A
HOH
2104
6
HOH
HOH
2104
A
HOH
2105
6
HOH
HOH
2105
A
HOH
2106
6
HOH
HOH
2106
A
HOH
2107
6
HOH
HOH
2107
A
HOH
2108
6
HOH
HOH
2108
A
HOH
2109
6
HOH
HOH
2109
A
HOH
2110
6
HOH
HOH
2110
A
HOH
2111
6
HOH
HOH
2111
A
HOH
2112
6
HOH
HOH
2112
A
HOH
2113
6
HOH
HOH
2113
A
HOH
2114
6
HOH
HOH
2114
A
HOH
2115
6
HOH
HOH
2115
A
HOH
2116
6
HOH
HOH
2116
A
HOH
2117
6
HOH
HOH
2117
A
HOH
2118
6
HOH
HOH
2118
A
HOH
2119
6
HOH
HOH
2119
A
HOH
2120
6
HOH
HOH
2120
A
HOH
2121
6
HOH
HOH
2121
A
HOH
2122
6
HOH
HOH
2122
A
HOH
2123
6
HOH
HOH
2123
A
HOH
2124
6
HOH
HOH
2124
A
HOH
2125
6
HOH
HOH
2125
A
HOH
2126
6
HOH
HOH
2126
A
HOH
2127
6
HOH
HOH
2127
A
HOH
2128
6
HOH
HOH
2128
A
HOH
2129
6
HOH
HOH
2129
A
HOH
2130
6
HOH
HOH
2130
A
HOH
2131
6
HOH
HOH
2131
A
HOH
2132
6
HOH
HOH
2132
A
HOH
2133
6
HOH
HOH
2133
A
HOH
2134
6
HOH
HOH
2134
A
HOH
2135
6
HOH
HOH
2135
A
HOH
2136
6
HOH
HOH
2136
A
HOH
2137
6
HOH
HOH
2137
A
HOH
2138
6
HOH
HOH
2138
A
HOH
2139
6
HOH
HOH
2139
A
HOH
2140
6
HOH
HOH
2140
A
HOH
2141
6
HOH
HOH
2141
A
HOH
2142
6
HOH
HOH
2142
A
HOH
2143
6
HOH
HOH
2143
A
HOH
2144
6
HOH
HOH
2144
A
HOH
2145
6
HOH
HOH
2145
A
HOH
2146
6
HOH
HOH
2146
A
HOH
2147
6
HOH
HOH
2147
A
HOH
2148
6
HOH
HOH
2148
A
HOH
2149
6
HOH
HOH
2149
A
HOH
2150
6
HOH
HOH
2150
A
HOH
2151
6
HOH
HOH
2151
A
HOH
2152
6
HOH
HOH
2152
A
HOH
2153
6
HOH
HOH
2153
A
HOH
2154
6
HOH
HOH
2154
A
HOH
2155
6
HOH
HOH
2155
A
HOH
2156
6
HOH
HOH
2156
A
HOH
2157
6
HOH
HOH
2157
A
HOH
2158
6
HOH
HOH
2158
A
HOH
2159
6
HOH
HOH
2159
A
HOH
2160
6
HOH
HOH
2160
A
HOH
2161
6
HOH
HOH
2161
A
HOH
2162
6
HOH
HOH
2162
A
HOH
2163
6
HOH
HOH
2163
A
HOH
2164
6
HOH
HOH
2164
A
HOH
2165
6
HOH
HOH
2165
A
HOH
2166
6
HOH
HOH
2166
A
HOH
2167
6
HOH
HOH
2167
A
HOH
2168
6
HOH
HOH
2168
A
HOH
2169
6
HOH
HOH
2169
A
HOH
2170
6
HOH
HOH
2170
A
HOH
2171
6
HOH
HOH
2171
A
HOH
2172
6
HOH
HOH
2172
A
HOH
2173
6
HOH
HOH
2173
A
HOH
2174
6
HOH
HOH
2174
A
HOH
2175
6
HOH
HOH
2175
A
HOH
2176
6
HOH
HOH
2176
A
HOH
2177
6
HOH
HOH
2177
A
HOH
2178
6
HOH
HOH
2178
A
HOH
2179
6
HOH
HOH
2179
A
HOH
2180
6
HOH
HOH
2180
A
HOH
2181
6
HOH
HOH
2181
A
HOH
2182
6
HOH
HOH
2182
A
HOH
2183
6
HOH
HOH
2183
A
HOH
2184
6
HOH
HOH
2184
A
HOH
2185
6
HOH
HOH
2185
A
HOH
2186
6
HOH
HOH
2186
A
HOH
2187
6
HOH
HOH
2187
A
HOH
2188
6
HOH
HOH
2188
A
HOH
2189
6
HOH
HOH
2189
A
HOH
2190
6
HOH
HOH
2190
A
HOH
2191
6
HOH
HOH
2191
A
HOH
2192
6
HOH
HOH
2192
A
HOH
2193
6
HOH
HOH
2193
A
HOH
2194
6
HOH
HOH
2194
A
HOH
2195
6
HOH
HOH
2195
A
HOH
2196
6
HOH
HOH
2196
A
HOH
2197
6
HOH
HOH
2197
A
HOH
2198
6
HOH
HOH
2198
A
HOH
2199
6
HOH
HOH
2199
A
HOH
2200
6
HOH
HOH
2200
A
HOH
2201
6
HOH
HOH
2201
A
HOH
2202
6
HOH
HOH
2202
A
HOH
2203
6
HOH
HOH
2203
A
HOH
2204
6
HOH
HOH
2204
A
HOH
2205
6
HOH
HOH
2205
A
HOH
2206
6
HOH
HOH
2206
A
HOH
2207
6
HOH
HOH
2207
A
HOH
2208
6
HOH
HOH
2208
A
HOH
2209
6
HOH
HOH
2209
A
n
1
49
A
n
2
50
A
n
3
51
A
n
4
52
A
n
5
53
A
n
6
54
A
n
7
55
A
n
8
56
A
n
9
57
A
n
10
58
A
n
11
59
A
n
12
60
A
n
13
61
A
n
14
62
A
n
15
63
A
n
16
64
A
n
17
65
A
n
18
66
A
n
19
67
A
n
20
68
A
n
21
69
A
n
22
70
A
n
23
71
A
n
24
72
A
n
25
73
A
n
26
74
A
ARG
75
n
27
ARG
75
A
LYS
76
n
28
LYS
76
A
LYS
77
n
29
LYS
77
A
ARG
78
n
30
ARG
78
A
PRO
79
n
31
PRO
79
A
GLU
80
n
32
GLU
80
A
ASP
81
n
33
ASP
81
A
PHE
82
n
34
PHE
82
A
LYS
83
n
35
LYS
83
A
PHE
84
n
36
PHE
84
A
GLY
85
n
37
GLY
85
A
LYS
86
n
38
LYS
86
A
ILE
87
n
39
ILE
87
A
LEU
88
n
40
LEU
88
A
GLY
89
n
41
GLY
89
A
GLU
90
n
42
GLU
90
A
GLY
91
n
43
GLY
91
A
SER
92
n
44
SER
92
A
PHE
93
n
45
PHE
93
A
SER
94
n
46
SER
94
A
THR
95
n
47
THR
95
A
VAL
96
n
48
VAL
96
A
VAL
97
n
49
VAL
97
A
LEU
98
n
50
LEU
98
A
ALA
99
n
51
ALA
99
A
ARG
100
n
52
ARG
100
A
GLU
101
n
53
GLU
101
A
LEU
102
n
54
LEU
102
A
ALA
103
n
55
ALA
103
A
THR
104
n
56
THR
104
A
SER
105
n
57
SER
105
A
ARG
106
n
58
ARG
106
A
GLU
107
n
59
GLU
107
A
TYR
108
n
60
TYR
108
A
ALA
109
n
61
ALA
109
A
ILE
110
n
62
ILE
110
A
LYS
111
n
63
LYS
111
A
ILE
112
n
64
ILE
112
A
LEU
113
n
65
LEU
113
A
GLU
114
n
66
GLU
114
A
LYS
115
n
67
LYS
115
A
ARG
116
n
68
ARG
116
A
HIS
117
n
69
HIS
117
A
ILE
118
n
70
ILE
118
A
ILE
119
n
71
ILE
119
A
LYS
120
n
72
LYS
120
A
GLU
121
n
73
GLU
121
A
ASN
122
n
74
ASN
122
A
LYS
123
n
75
LYS
123
A
VAL
124
n
76
VAL
124
A
PRO
125
n
77
PRO
125
A
TYR
126
n
78
TYR
126
A
VAL
127
n
79
VAL
127
A
THR
128
n
80
THR
128
A
ARG
129
n
81
ARG
129
A
GLU
130
n
82
GLU
130
A
ARG
131
n
83
ARG
131
A
ASP
132
n
84
ASP
132
A
VAL
133
n
85
VAL
133
A
MET
134
n
86
MET
134
A
SER
135
n
87
SER
135
A
ARG
136
n
88
ARG
136
A
LEU
137
n
89
LEU
137
A
ASP
138
n
90
ASP
138
A
HIS
139
n
91
HIS
139
A
PRO
140
n
92
PRO
140
A
PHE
141
n
93
PHE
141
A
PHE
142
n
94
PHE
142
A
VAL
143
n
95
VAL
143
A
LYS
144
n
96
LYS
144
A
LEU
145
n
97
LEU
145
A
TYR
146
n
98
TYR
146
A
PHE
147
n
99
PHE
147
A
THR
148
n
100
THR
148
A
PHE
149
n
101
PHE
149
A
GLN
150
n
102
GLN
150
A
ASP
151
n
103
ASP
151
A
ASP
152
n
104
ASP
152
A
GLU
153
n
105
GLU
153
A
LYS
154
n
106
LYS
154
A
LEU
155
n
107
LEU
155
A
TYR
156
n
108
TYR
156
A
PHE
157
n
109
PHE
157
A
GLY
158
n
110
GLY
158
A
LEU
159
n
111
LEU
159
A
SER
160
n
112
SER
160
A
TYR
161
n
113
TYR
161
A
ALA
162
n
114
ALA
162
A
LYS
163
n
115
LYS
163
A
ASN
164
n
116
ASN
164
A
GLY
165
n
117
GLY
165
A
GLU
166
n
118
GLU
166
A
LEU
167
n
119
LEU
167
A
LEU
168
n
120
LEU
168
A
LYS
169
n
121
LYS
169
A
TYR
170
n
122
TYR
170
A
ILE
171
n
123
ILE
171
A
ARG
172
n
124
ARG
172
A
LYS
173
n
125
LYS
173
A
ILE
174
n
126
ILE
174
A
GLY
175
n
127
GLY
175
A
SER
176
n
128
SER
176
A
PHE
177
n
129
PHE
177
A
ASP
178
n
130
ASP
178
A
GLU
179
n
131
GLU
179
A
THR
180
n
132
THR
180
A
CYS
181
n
133
CYS
181
A
THR
182
n
134
THR
182
A
ARG
183
n
135
ARG
183
A
PHE
184
n
136
PHE
184
A
TYR
185
n
137
TYR
185
A
THR
186
n
138
THR
186
A
ALA
187
n
139
ALA
187
A
GLU
188
n
140
GLU
188
A
ILE
189
n
141
ILE
189
A
VAL
190
n
142
VAL
190
A
SER
191
n
143
SER
191
A
ALA
192
n
144
ALA
192
A
LEU
193
n
145
LEU
193
A
GLU
194
n
146
GLU
194
A
TYR
195
n
147
TYR
195
A
LEU
196
n
148
LEU
196
A
HIS
197
n
149
HIS
197
A
GLY
198
n
150
GLY
198
A
LYS
199
n
151
LYS
199
A
GLY
200
n
152
GLY
200
A
ILE
201
n
153
ILE
201
A
ILE
202
n
154
ILE
202
A
HIS
203
n
155
HIS
203
A
ARG
204
n
156
ARG
204
A
ASP
205
n
157
ASP
205
A
LEU
206
n
158
LEU
206
A
LYS
207
n
159
LYS
207
A
PRO
208
n
160
PRO
208
A
GLU
209
n
161
GLU
209
A
ASN
210
n
162
ASN
210
A
ILE
211
n
163
ILE
211
A
LEU
212
n
164
LEU
212
A
LEU
213
n
165
LEU
213
A
ASN
214
n
166
ASN
214
A
GLU
215
n
167
GLU
215
A
ASP
216
n
168
ASP
216
A
MET
217
n
169
MET
217
A
HIS
218
n
170
HIS
218
A
ILE
219
n
171
ILE
219
A
GLN
220
n
172
GLN
220
A
ILE
221
n
173
ILE
221
A
THR
222
n
174
THR
222
A
ASP
223
n
175
ASP
223
A
PHE
224
n
176
PHE
224
A
GLY
225
n
177
GLY
225
A
THR
226
n
178
THR
226
A
ALA
227
n
179
ALA
227
A
LYS
228
n
180
LYS
228
A
VAL
229
n
181
VAL
229
A
LEU
230
n
182
LEU
230
A
SER
231
n
183
SER
231
A
PRO
232
n
184
PRO
232
A
GLU
233
n
185
GLU
233
A
SER
234
n
186
SER
234
A
LYS
235
n
187
LYS
235
A
GLN
236
n
188
GLN
236
A
ALA
237
n
189
ALA
237
A
ARG
238
n
190
ARG
238
A
ALA
239
n
191
ALA
239
A
ASN
240
n
192
ASN
240
A
SEP
241
n
193
SEP
241
A
PHE
242
n
194
PHE
242
A
VAL
243
n
195
VAL
243
A
GLY
244
n
196
GLY
244
A
THR
245
n
197
THR
245
A
ALA
246
n
198
ALA
246
A
GLN
247
n
199
GLN
247
A
TYR
248
n
200
TYR
248
A
VAL
249
n
201
VAL
249
A
SER
250
n
202
SER
250
A
PRO
251
n
203
PRO
251
A
GLU
252
n
204
GLU
252
A
LEU
253
n
205
LEU
253
A
LEU
254
n
206
LEU
254
A
THR
255
n
207
THR
255
A
GLU
256
n
208
GLU
256
A
LYS
257
n
209
LYS
257
A
SER
258
n
210
SER
258
A
ALA
259
n
211
ALA
259
A
CSS
260
n
212
CSS
260
A
LYS
261
n
213
LYS
261
A
SER
262
n
214
SER
262
A
SER
263
n
215
SER
263
A
ASP
264
n
216
ASP
264
A
LEU
265
n
217
LEU
265
A
TRP
266
n
218
TRP
266
A
ALA
267
n
219
ALA
267
A
LEU
268
n
220
LEU
268
A
GLY
269
n
221
GLY
269
A
CYS
270
n
222
CYS
270
A
ILE
271
n
223
ILE
271
A
ILE
272
n
224
ILE
272
A
TYR
273
n
225
TYR
273
A
GLN
274
n
226
GLN
274
A
LEU
275
n
227
LEU
275
A
VAL
276
n
228
VAL
276
A
ALA
277
n
229
ALA
277
A
GLY
278
n
230
GLY
278
A
LEU
279
n
231
LEU
279
A
PRO
280
n
232
PRO
280
A
PRO
281
n
233
PRO
281
A
PHE
282
n
234
PHE
282
A
ARG
283
n
235
ARG
283
A
ALA
284
n
236
ALA
284
A
GLY
285
n
237
GLY
285
A
ASN
286
n
238
ASN
286
A
GLU
287
n
239
GLU
287
A
GLY
288
n
240
GLY
288
A
LEU
289
n
241
LEU
289
A
ILE
290
n
242
ILE
290
A
PHE
291
n
243
PHE
291
A
ALA
292
n
244
ALA
292
A
LYS
293
n
245
LYS
293
A
ILE
294
n
246
ILE
294
A
ILE
295
n
247
ILE
295
A
LYS
296
n
248
LYS
296
A
LEU
297
n
249
LEU
297
A
GLU
298
n
250
GLU
298
A
TYR
299
n
251
TYR
299
A
ASP
300
n
252
ASP
300
A
PHE
301
n
253
PHE
301
A
PRO
302
n
254
PRO
302
A
GLU
303
n
255
GLU
303
A
LYS
304
n
256
LYS
304
A
PHE
305
n
257
PHE
305
A
PHE
306
n
258
PHE
306
A
PRO
307
n
259
PRO
307
A
LYS
308
n
260
LYS
308
A
ALA
309
n
261
ALA
309
A
ARG
310
n
262
ARG
310
A
ASP
311
n
263
ASP
311
A
LEU
312
n
264
LEU
312
A
VAL
313
n
265
VAL
313
A
GLU
314
n
266
GLU
314
A
LYS
315
n
267
LYS
315
A
LEU
316
n
268
LEU
316
A
LEU
317
n
269
LEU
317
A
VAL
318
n
270
VAL
318
A
LEU
319
n
271
LEU
319
A
ASP
320
n
272
ASP
320
A
ALA
321
n
273
ALA
321
A
THR
322
n
274
THR
322
A
LYS
323
n
275
LYS
323
A
ARG
324
n
276
ARG
324
A
LEU
325
n
277
LEU
325
A
GLY
326
n
278
GLY
326
A
CYS
327
n
279
CYS
327
A
GLU
328
n
280
GLU
328
A
GLU
329
n
281
GLU
329
A
MET
330
n
282
MET
330
A
GLU
331
n
283
GLU
331
A
GLY
332
n
284
GLY
332
A
TYR
333
n
285
TYR
333
A
GLY
334
n
286
GLY
334
A
PRO
335
n
287
PRO
335
A
LEU
336
n
288
LEU
336
A
LYS
337
n
289
LYS
337
A
ALA
338
n
290
ALA
338
A
HIS
339
n
291
HIS
339
A
PRO
340
n
292
PRO
340
A
PHE
341
n
293
PHE
341
A
PHE
342
n
294
PHE
342
A
GLU
343
n
295
GLU
343
A
SER
344
n
296
SER
344
A
VAL
345
n
297
VAL
345
A
THR
346
n
298
THR
346
A
TRP
347
n
299
TRP
347
A
GLU
348
n
300
GLU
348
A
ASN
349
n
301
ASN
349
A
LEU
350
n
302
LEU
350
A
HIS
351
n
303
HIS
351
A
GLN
352
n
304
GLN
352
A
GLN
353
n
305
GLN
353
A
THR
354
n
306
THR
354
A
PRO
355
n
307
PRO
355
A
PRO
356
n
308
PRO
356
A
LYS
357
n
309
LYS
357
A
LEU
358
n
310
LEU
358
A
THR
359
n
311
THR
359
A
2.2946
2.1782
0.3919
3.0799
0.2411
1.2532
0.1267
0.1656
0.2069
-0.1657
-0.1322
0.3011
0.0217
-0.2107
-0.0108
0.1035
0.0301
-0.0186
0.2100
0.0383
0.1040
refined
-8.9155
24.5124
-16.1908
X-RAY DIFFRACTION
0.1087
-0.0676
-0.2482
0.2667
0.6424
1.7499
0.0038
0.1490
0.0186
-0.0325
-0.0548
-0.0423
-0.1162
0.1632
0.0649
0.0679
0.0353
-0.0078
0.2026
0.0330
0.0451
refined
-7.0933
25.6663
-13.9567
X-RAY DIFFRACTION
2.7577
-0.8262
0.3122
0.7096
0.4908
1.2012
0.4634
0.2953
-0.0720
-0.1464
-0.3111
0.1598
-0.1858
-0.3181
-0.1038
0.1836
0.0708
0.0153
0.2365
0.0169
0.1795
refined
-16.3009
34.6489
-4.4123
X-RAY DIFFRACTION
0.2466
-0.0376
0.2395
0.8801
-0.1431
1.8736
-0.0294
0.0382
0.1257
-0.0345
-0.0186
-0.0981
-0.3676
-0.0402
0.0318
0.1305
-0.0176
0.0066
0.1274
0.0246
0.0846
refined
-7.3568
26.4935
-3.8426
X-RAY DIFFRACTION
0.1774
-0.2215
-0.1141
1.6271
-0.2707
0.3156
0.1054
0.0784
0.1141
-0.1855
-0.2508
-0.0112
-0.0251
0.0800
0.1082
0.1243
0.0286
-0.0029
0.1502
0.0202
0.0818
refined
-10.1863
24.5599
-11.3339
X-RAY DIFFRACTION
0.9127
0.2792
0.1013
0.6244
0.3643
0.7323
-0.0536
0.0098
-0.1106
0.0386
0.0786
-0.0661
0.0474
0.0707
-0.0455
0.0687
0.0022
-0.0046
0.0762
-0.0088
0.0860
refined
-19.9033
14.8809
5.6810
X-RAY DIFFRACTION
1.0562
-0.7376
-0.3602
1.4892
-0.0978
0.8670
-0.0161
0.0827
0.1239
-0.0445
0.0051
-0.2400
-0.1653
0.0702
0.0257
0.0890
-0.0239
-0.0120
0.1233
0.0001
0.0835
refined
-17.0034
25.1392
4.0766
X-RAY DIFFRACTION
0.8448
0.0684
-0.0952
0.2345
-0.0341
0.6407
-0.0518
-0.0193
0.1327
-0.0204
0.0149
0.1823
-0.1357
0.0414
0.0408
0.0909
0.0053
-0.0225
0.0645
0.0086
0.1002
refined
-30.7921
22.6065
6.5538
X-RAY DIFFRACTION
0.8385
-0.1800
0.2514
1.0455
-0.1479
0.8777
-0.0333
-0.1049
-0.1236
0.0976
0.0100
0.2432
0.1060
-0.0920
0.0156
0.0895
-0.0088
0.0267
0.0738
0.0053
0.1253
refined
-35.1779
15.5200
11.3834
X-RAY DIFFRACTION
0.5906
0.3334
-0.1286
1.7423
-0.6438
0.2723
0.1264
-0.1155
0.0688
0.4545
-0.1383
-0.0460
-0.2071
0.1377
0.0372
0.1817
0.0111
-0.0528
0.1537
-0.0022
0.0460
refined
-21.5162
22.2326
21.2906
X-RAY DIFFRACTION
0.8660
0.2832
-0.5420
0.8243
-0.1312
2.1632
-0.3661
-0.0517
-0.4256
0.1317
0.0964
-0.3349
0.4486
0.2868
0.1476
0.1738
0.0407
-0.0008
0.1675
0.0175
0.1966
refined
-13.1227
8.9633
14.2790
X-RAY DIFFRACTION
X-RAY DIFFRACTION
1
(CHAIN A AND RESID 75:99)
X-RAY DIFFRACTION
2
(CHAIN A AND RESID 100:117)
X-RAY DIFFRACTION
3
(CHAIN A AND RESID 118:138)
X-RAY DIFFRACTION
4
(CHAIN A AND RESID 139:151)
X-RAY DIFFRACTION
5
(CHAIN A AND RESID 152:165)
X-RAY DIFFRACTION
6
(CHAIN A AND RESID 166:208)
X-RAY DIFFRACTION
7
(CHAIN A AND RESID 209:238)
X-RAY DIFFRACTION
8
(CHAIN A AND RESID 239:283)
X-RAY DIFFRACTION
9
(CHAIN A AND RESID 284:325)
X-RAY DIFFRACTION
10
(CHAIN A AND RESID 326:338)
X-RAY DIFFRACTION
11
(CHAIN A AND RESID 339:357)
author_and_software_defined_assembly
PISA
1
monomeric
A
ASP
223
A
OD1
ASP
175
1_555
A
MG
800
E
MG
MG
1_555
A
ATP
500
B
O1A
ATP
1_555
155.3
A
ASP
223
A
OD1
ASP
175
1_555
A
MG
800
E
MG
MG
1_555
A
ATP
500
B
O2B
ATP
1_555
107.5
A
ATP
500
B
O1A
ATP
1_555
A
MG
800
E
MG
MG
1_555
A
ATP
500
B
O2B
ATP
1_555
82.2
A
SEP
241
PHOSPHOSERINE
A
SEP
193
SER
A
CSS
260
S-MERCAPTOCYSTEINE
A
CSS
212
CYS
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
GLY
85
A
N
GLY
37
A
O
LEU
98
A
O
LEU
50
A
N
VAL
97
A
N
VAL
49
A
O
ILE
110
A
O
ILE
62
A
N
ALA
109
A
N
ALA
61
A
O
LEU
159
A
O
LEU
111
A
O
GLY
158
A
O
GLY
110
A
N
PHE
147
A
N
PHE
99
A
N
GLY
165
A
N
GLY
117
A
O
LEU
213
A
O
LEU
165
A
N
LEU
212
A
N
LEU
164
A
O
GLN
220
A
O
GLN
172
A
N
ILE
202
A
N
ILE
154
A
O
LYS
228
A
O
LYS
180
1
A
N
ARG
75
A
N
ARG
27
1
Y
1
A
CA
ARG
75
A
CA
ARG
27
1
Y
1
A
CB
ARG
75
A
CB
ARG
27
1
Y
1
A
CG
ARG
75
A
CG
ARG
27
1
Y
1
A
CD
ARG
75
A
CD
ARG
27
1
Y
1
A
NE
ARG
75
A
NE
ARG
27
1
Y
1
A
CZ
ARG
75
A
CZ
ARG
27
1
Y
1
A
NH1
ARG
75
A
NH1
ARG
27
1
Y
1
A
NH2
ARG
75
A
NH2
ARG
27
1
Y
1
A
CD
ARG
78
A
CD
ARG
30
1
Y
1
A
NE
ARG
78
A
NE
ARG
30
1
Y
1
A
CZ
ARG
78
A
CZ
ARG
30
1
Y
1
A
NH1
ARG
78
A
NH1
ARG
30
1
Y
1
A
NH2
ARG
78
A
NH2
ARG
30
1
Y
1
A
CE
LYS
83
A
CE
LYS
35
1
Y
1
A
NZ
LYS
83
A
NZ
LYS
35
1
Y
1
A
CD
ARG
100
A
CD
ARG
52
1
Y
1
A
NE
ARG
100
A
NE
ARG
52
1
Y
1
A
CZ
ARG
100
A
CZ
ARG
52
1
Y
1
A
NH1
ARG
100
A
NH1
ARG
52
1
Y
1
A
NH2
ARG
100
A
NH2
ARG
52
1
Y
1
A
CG
ARG
116
A
CG
ARG
68
1
Y
1
A
CD
ARG
116
A
CD
ARG
68
1
Y
1
A
NE
ARG
116
A
NE
ARG
68
1
Y
1
A
CZ
ARG
116
A
CZ
ARG
68
1
Y
1
A
NH1
ARG
116
A
NH1
ARG
68
1
Y
1
A
NH2
ARG
116
A
NH2
ARG
68
1
Y
1
A
CG
LYS
120
A
CG
LYS
72
1
Y
1
A
CD
LYS
120
A
CD
LYS
72
1
Y
1
A
CE
LYS
120
A
CE
LYS
72
1
Y
1
A
NZ
LYS
120
A
NZ
LYS
72
1
Y
1
A
CE
LYS
144
A
CE
LYS
96
1
Y
1
A
NZ
LYS
144
A
NZ
LYS
96
1
Y
1
A
CD
GLU
153
A
CD
GLU
105
1
Y
1
A
OE1
GLU
153
A
OE1
GLU
105
1
Y
1
A
OE2
GLU
153
A
OE2
GLU
105
1
Y
1
A
CD
LYS
163
A
CD
LYS
115
1
Y
1
A
CE
LYS
163
A
CE
LYS
115
1
Y
1
A
NZ
LYS
163
A
NZ
LYS
115
1
Y
1
A
NE
ARG
172
A
NE
ARG
124
1
Y
1
A
CZ
ARG
172
A
CZ
ARG
124
1
Y
1
A
NH1
ARG
172
A
NH1
ARG
124
1
Y
1
A
NH2
ARG
172
A
NH2
ARG
124
1
Y
1
A
CD
LYS
173
A
CD
LYS
125
1
Y
1
A
CE
LYS
173
A
CE
LYS
125
1
Y
1
A
NZ
LYS
173
A
NZ
LYS
125
1
Y
1
A
CE
LYS
199
A
CE
LYS
151
1
Y
1
A
NZ
LYS
199
A
NZ
LYS
151
1
Y
1
A
CD
GLU
215
A
CD
GLU
167
1
Y
1
A
OE1
GLU
215
A
OE1
GLU
167
1
Y
1
A
OE2
GLU
215
A
OE2
GLU
167
1
Y
1
A
CE
LYS
235
A
CE
LYS
187
1
Y
1
A
NZ
LYS
235
A
NZ
LYS
187
1
Y
1
A
NE
ARG
238
A
NE
ARG
190
1
Y
1
A
CZ
ARG
238
A
CZ
ARG
190
1
Y
1
A
NH1
ARG
238
A
NH1
ARG
190
1
Y
1
A
NH2
ARG
238
A
NH2
ARG
190
1
Y
1
A
NZ
LYS
257
A
NZ
LYS
209
1
Y
1
A
CE
LYS
323
A
CE
LYS
275
1
Y
1
A
NZ
LYS
323
A
NZ
LYS
275
1
Y
1
A
CD
GLU
343
A
CD
GLU
295
1
Y
1
A
OE1
GLU
343
A
OE1
GLU
295
1
Y
1
A
OE2
GLU
343
A
OE2
GLU
295
1
Y
1
A
CG
ASN
349
A
CG
ASN
301
1
Y
1
A
OD1
ASN
349
A
OD1
ASN
301
1
Y
1
A
ND2
ASN
349
A
ND2
ASN
301
1
Y
1
A
CD
GLN
352
A
CD
GLN
304
1
Y
1
A
OE1
GLN
352
A
OE1
GLN
304
1
Y
1
A
NE2
GLN
352
A
NE2
GLN
304
1
Y
1
A
CG
LYS
357
A
CG
LYS
309
1
Y
1
A
CD
LYS
357
A
CD
LYS
309
1
Y
1
A
CE
LYS
357
A
CE
LYS
309
1
Y
1
A
NZ
LYS
357
A
NZ
LYS
309
1
Y
1
A
C
THR
359
A
C
THR
311
1
Y
1
A
O
THR
359
A
O
THR
311
1
Y
1
A
CB
THR
359
A
CB
THR
311
1
Y
1
A
OG1
THR
359
A
OG1
THR
311
1
Y
1
A
CG2
THR
359
A
CG2
THR
311
1
Y
1
A
GLY
49
A
GLY
1
1
Y
1
A
ALA
50
A
ALA
2
1
Y
1
A
MET
51
A
MET
3
1
Y
1
A
ASP
52
A
ASP
4
1
Y
1
A
GLY
53
A
GLY
5
1
Y
1
A
THR
54
A
THR
6
1
Y
1
A
ALA
55
A
ALA
7
1
Y
1
A
ALA
56
A
ALA
8
1
Y
1
A
GLU
57
A
GLU
9
1
Y
1
A
PRO
58
A
PRO
10
1
Y
1
A
ARG
59
A
ARG
11
1
Y
1
A
PRO
60
A
PRO
12
1
Y
1
A
GLY
61
A
GLY
13
1
Y
1
A
ALA
62
A
ALA
14
1
Y
1
A
GLY
63
A
GLY
15
1
Y
1
A
SER
64
A
SER
16
1
Y
1
A
LEU
65
A
LEU
17
1
Y
1
A
GLN
66
A
GLN
18
1
Y
1
A
HIS
67
A
HIS
19
1
Y
1
A
ALA
68
A
ALA
20
1
Y
1
A
GLN
69
A
GLN
21
1
Y
1
A
PRO
70
A
PRO
22
1
Y
1
A
PRO
71
A
PRO
23
1
Y
1
A
PRO
72
A
PRO
24
1
Y
1
A
GLN
73
A
GLN
25
1
Y
1
A
PRO
74
A
PRO
26
1
Y
1
A
C11
AZ7
600
WRONG HAND
1
A
A
HG1
HG
THR
SER
180
231
1.05
1_555
1_545
1
A
ASP
138
-150.58
61.79
1
A
ASP
151
-125.31
-161.31
1
A
ARG
204
80.07
-12.14
1
A
ASP
223
76.01
72.40
-0.5851
0.0000
-1.4489
0.2149
0.0000
0.3702
0.1997
0.1588
0.1609
1.85
36.242
1292
25850
5.0
99.37
0.19
1
2.00
MOLECULAR REPLACEMENT
18.42
0.89
1.00
PDB ENTRY 3HRC
ML
FLAT BULK SOLVENT MODEL
40.291
0.426
1.85
36.242
209
2534
85
0
2240
0.008
2417
1.090
3308
13.644
884
0.074
356
0.005
409
0.2768
0.2261
1.9240
141
2670
99.00
0.2160
0.1833
2.0115
141
2692
99.00
0.2333
0.1565
2.1176
142
2692
99.00
0.1799
0.1467
2.2502
143
2717
99.00
0.1845
0.1432
2.4239
143
2722
99.00
0.2038
0.1544
2.6678
144
2740
100.00
0.2193
0.1587
3.0536
144
2723
100.00
0.1776
0.1534
3.8466
145
2762
100.00
0.1883
0.1556
36.2486
149
2840
100.00
16.59
1.85
47.00
4A07
25852
2.8
0.10
1
15.50
4.6
99.3
0.72
1.85
1.95
2.80
1
4.6
98.9
refinement
PHENIX
(PHENIX.REFINE)
data reduction
XDS
data scaling
XSCALE
phasing
PHASER
Human PDK1 Kinase Domain in Complex with Allosteric Activator PS171 Bound to the PIF-Pocket
1
N
N
2
N
N
3
N
N
3
N
N
4
N
N
5
N
N
5
N
N
5
N
N
5
N
N
5
N
N
6
N
N
A
LYS
115
A
LYS
67
HELX_P
A
GLU
121
A
GLU
73
1
1
7
A
LYS
123
A
LYS
75
HELX_P
A
SER
135
A
SER
87
1
2
13
A
LEU
167
A
LEU
119
HELX_P
A
ILE
174
A
ILE
126
1
3
8
A
GLU
179
A
GLU
131
HELX_P
A
LYS
199
A
LYS
151
1
4
21
A
PRO
251
A
PRO
203
HELX_P
A
GLU
256
A
GLU
208
1
5
6
A
SER
262
A
SER
214
HELX_P
A
ALA
277
A
ALA
229
1
6
16
A
GLU
287
A
GLU
239
HELX_P
A
ILE
295
A
ILE
247
1
7
9
A
PRO
307
A
PRO
259
HELX_P
A
LEU
316
A
LEU
268
1
8
10
A
TYR
333
A
TYR
285
HELX_P
A
ALA
338
A
ALA
290
1
9
6
covale
1.326
both
A
ASN
240
A
C
ASN
192
1_555
A
SEP
241
A
N
SEP
193
1_555
covale
1.326
both
A
SEP
241
A
C
SEP
193
1_555
A
PHE
242
A
N
PHE
194
1_555
covale
1.327
both
A
ALA
259
A
C
ALA
211
1_555
A
CSS
260
A
N
CSS
212
1_555
covale
1.331
both
A
CSS
260
A
C
CSS
212
1_555
A
LYS
261
A
N
LYS
213
1_555
metalc
2.206
A
ASP
223
A
OD1
ASP
175
1_555
A
MG
800
E
MG
MG
1_555
metalc
2.317
A
ATP
500
B
O1A
ATP
1_555
A
MG
800
E
MG
MG
1_555
metalc
2.276
A
ATP
500
B
O2B
ATP
1_555
A
MG
800
E
MG
MG
1_555
TRANSFERASE
TRANSFERASE, ALLOSTERIC SITE
PDPK1_HUMAN
UNP
1
O15530
50
359
4A07
50
359
O15530
A
1
2
311
1
expression tag
GLY
49
4A07
A
O15530
UNP
1
1
TYR
engineered mutation
GLY
288
4A07
A
O15530
UNP
288
240
1
GLN
engineered mutation
ALA
292
4A07
A
O15530
UNP
292
244
5
3
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
PHE
82
A
PHE
34
A
GLY
91
A
GLY
43
A
SER
94
A
SER
46
A
GLU
101
A
GLU
53
A
ARG
106
A
ARG
58
A
GLU
114
A
GLU
66
A
LYS
154
A
LYS
106
A
LEU
159
A
LEU
111
A
PHE
147
A
PHE
99
A
ASP
151
A
ASP
103
A
GLY
165
A
GLY
117
A
GLU
166
A
GLU
118
A
ILE
211
A
ILE
163
A
ASN
214
A
ASN
166
A
HIS
218
A
HIS
170
A
ILE
221
A
ILE
173
A
ILE
201
A
ILE
153
A
ILE
202
A
ILE
154
A
LYS
228
A
LYS
180
A
VAL
229
A
VAL
181
BINDING SITE FOR RESIDUE ATP A 500
A
ATP
500
Software
18
BINDING SITE FOR RESIDUE AZ7 A 600
A
AZ7
600
Software
9
BINDING SITE FOR RESIDUE AZ7 A 700
A
AZ7
700
Software
11
BINDING SITE FOR RESIDUE MG A 800
A
MG
800
Software
3
BINDING SITE FOR RESIDUE CL A 860
A
CL
860
Software
1
BINDING SITE FOR RESIDUE CL A 870
A
CL
870
Software
1
BINDING SITE FOR RESIDUE CL A 890
A
CL
890
Software
2
A
GLY
89
A
GLY
41
18
1_555
A
GLY
91
A
GLY
43
18
1_555
A
SER
92
A
SER
44
18
1_555
A
SER
94
A
SER
46
18
1_555
A
VAL
96
A
VAL
48
18
1_555
A
ALA
109
A
ALA
61
18
1_555
A
LYS
111
A
LYS
63
18
1_555
A
SER
160
A
SER
112
18
1_555
A
ALA
162
A
ALA
114
18
1_555
A
GLU
166
A
GLU
118
18
1_555
A
LEU
212
A
LEU
164
18
1_555
A
ASP
223
A
ASP
175
18
1_555
A
MG
800
E
MG
18
1_555
A
HOH
2019
K
HOH
18
1_555
A
HOH
2128
K
HOH
18
1_555
A
HOH
2131
K
HOH
18
1_555
A
HOH
2132
K
HOH
18
1_555
A
HOH
2209
K
HOH
18
1_555
A
LYS
76
A
LYS
28
9
1_555
A
LYS
115
A
LYS
67
9
1_555
A
ILE
119
A
ILE
71
9
1_555
A
VAL
124
A
VAL
76
9
1_555
A
ARG
131
A
ARG
83
9
1_555
A
THR
148
A
THR
100
9
1_555
A
GLN
150
A
GLN
102
9
1_555
A
LEU
155
A
LEU
107
9
1_555
A
PHE
157
A
PHE
109
9
1_555
A
LEU
168
A
LEU
120
11
1_555
A
ARG
172
A
ARG
124
11
1_555
A
PHE
242
A
PHE
194
11
4_445
A
LEU
253
A
LEU
205
11
4_445
A
LEU
254
A
LEU
206
11
4_445
A
LYS
257
A
LYS
209
11
4_445
A
GLN
274
A
GLN
226
11
1_555
A
GLY
278
A
GLY
230
11
1_555
A
PHE
282
A
PHE
234
11
1_555
A
ARG
283
A
ARG
235
11
1_555
A
PHE
291
A
PHE
243
11
4_445
A
LYS
111
A
LYS
63
3
1_555
A
ASP
223
A
ASP
175
3
1_555
A
ATP
500
B
ATP
3
1_555
A
ASP
311
A
ASP
263
1
1_555
A
LEU
350
A
LEU
302
1
1_555
A
LYS
169
A
LYS
121
2
1_555
A
TYR
170
A
TYR
122
2
1_555
5
C 1 2 1