0.012155
0.000000
0.000000
0.000000
0.008454
0.000000
0.000000
0.000000
0.026871
0.00000
0.00000
0.00000
Thiyagarajan, N.
Ferguson, R.
Saha, S.
Pham, T.
Subramanian, V.
Acharya, K.R.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
82.269
118.284
37.215
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C4 H6 O6
150.087
L(+)-TARTARIC ACID
non-polymer
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
R
C
N
309
N
O
N
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
O
N
322
N
O
N
323
N
C
N
324
R
C
N
325
N
O
N
326
R
C
N
327
N
O
N
328
N
C
N
329
N
O
N
330
N
O
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
N
N
338
S
C
N
339
N
C
N
340
N
O
N
341
N
C
Y
342
N
C
Y
343
N
C
Y
344
N
C
Y
345
N
N
Y
346
N
C
Y
347
N
C
Y
348
N
C
Y
349
N
C
Y
350
N
C
N
351
N
O
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
N
N
365
S
C
N
366
N
C
N
367
N
O
N
368
N
C
Y
369
N
C
Y
370
N
C
Y
371
N
C
Y
372
N
C
Y
373
N
C
Y
374
N
C
N
375
N
O
N
376
N
O
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
N
N
389
S
C
N
390
N
C
N
391
N
O
N
392
N
C
N
393
N
C
N
394
N
C
N
395
N
O
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
doub
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
doub
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
doub
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
Y
332
N
doub
Y
333
N
sing
Y
334
N
sing
N
335
N
sing
Y
336
N
doub
Y
337
N
sing
Y
338
N
sing
N
339
N
sing
Y
340
N
sing
Y
341
N
doub
N
342
N
sing
Y
343
N
doub
N
344
N
sing
Y
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
doub
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
Y
360
N
doub
Y
361
N
sing
Y
362
N
sing
N
363
N
sing
Y
364
N
doub
N
365
N
sing
Y
366
N
doub
N
367
N
sing
Y
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
doub
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
UK
Nat.Commun.
2041-1723
3
1121
10.1038/NCOMMS2126
23047679
Structural and Molecular Insights Into the Mechanism of Action of Human Angiogenin-Als Variants in Neurons.
2012
10.2210/pdb4ahm/pdb
pdb_00004ahm
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2008-05-17
ADSC QUANTUM 315
SINGLE WAVELENGTH
M
x-ray
1
0.9796
1.0
I02
Diamond
0.9796
SYNCHROTRON
DIAMOND BEAMLINE I02
14183.062
ANGIOGENIN
3.1.27.-
YES
1
man
polymer
150.087
L(+)-TARTARIC ACID
1
syn
non-polymer
18.015
water
99
nat
water
RIBONUCLEASE 5, RNASE 5
no
no
QDNSRYTHFLTQHYDAKPQGRDDRYCESIMRRRGLTSPCKDINTFIHGNKRSIKAICENKNGNPHRENLRISKSSFQVTT
CKLHGGSPWPPCQYRATAGFRNVVVACENGLPIHLDQSIFRRP
QDNSRYTHFLTQHYDAKPQGRDDRYCESIMRRRGLTSPCKDINTFIHGNKRSIKAICENKNGNPHRENLRISKSSFQVTT
CKLHGGSPWPPCQYRATAGFRNVVVACENGLPIHLDQSIFRRP
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
HUMAN
sample
9606
HOMO SAPIENS
469008
ESCHERICHIA COLI
BL21(DE3)
CODON PLUS - RIPL
PET22B(PLUS)
PLASMID
1
3.3
62
NONE
20 % PEG 4K, 0.4 M NA/K TARTRATE, 0.1 M NA CITRATE PH 5.5
chem_comp_atom
chem_comp_bond
database_2
pdbx_database_status
pdbx_initial_refinement_model
struct_site
repository
Initial release
Database references
Data collection
Database references
Derived calculations
Other
Refinement description
1
0
2012-10-10
1
1
2012-10-24
1
2
2023-12-20
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.status_code_sf
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
BINDING OF PHOSPHATE AND PYROPHOSPHATE IONS AT THE ACTIVE SITE OF HUMAN ANGIOGENIN AS REVEALED BY X-RAY CRYSTALLOGRAPHY
BINDING OF PHOSPHATE AND PYROPHOSPHATE IONS AT THE ACTIVE SITE OF HUMAN ANGIOGENIN AS REVEALED BY X-RAY CRYSTALLOGRAPHY
CRYSTAL STRUCTURE OF HUMAN ANGIOGENIN OF THE MET(-1) FORM
CRYSTAL STRUCTURE OF HUMAN ANGIOGENIN VARIANT T44D
RIBONUCLEASE INHIBITOR-ANGIOGENIN COMPLEX
CRYSTAL STRUCTURE OF HUMAN ANGIOGENIN VARIANT H13A.
CRYSTAL STRUCTURE OF HUMAN ANGIOGENIN VARIANT T80A
ARH-II, AN ANGIOGENIN/RNASE A CHIMERA
CRYSTAL STRUCTURE OF HUMAN ANGIOGENIN IN COMPLEX WITH FAB FRAGMENT OF ITS MONOCLONAL ANTIBODY MAB 26-2F
CRYSTAL STRUCTURE OF HUMAN ANGIOGENIN VARIANT K40Q
CRYSTAL STRUCTURE OF HUMAN ANGIOGENIN VARIANT Q117G
CRYSTAL STRUCTURE OF HUMAN ANGIOGENIN VARIANT DES(121- 123)
CRYSTAL STRUCTURE OF HUMAN ANGIOGENIN VARIANT D116H
ANGIOGENIN
CRYSTAL STRUCTURE OF HUMAN ANGIOGENIN DOUBLE VARIANTI119A /F120A
3D SOLUTION STRUCTURE OF HUMAN ANGIOGENIN DETERMINED BY 1H, 15N NMR SPECTROSCOPY, 30 STRUCTURES
CRYSTAL STRUCTURE OF HUMAN ANGIOGENIN
BINDING OF PHOSPHATE AND PYROPHOSPHATE IONS AT THE ACTIVE SITE OF HUMAN ANGIOGENIN AS REVEALED BY X-RAY CRYSTALLOGRAPHY
I46V - ANGIOGENIN MUTANTS AND AMYOTROPHIC LATERAL SCLEROSIS - A BIOCHEMICAL AND BIOLOGICAL ANALYSIS
K54E - ANGIOGENIN MUTANTS AND AMYOTROPHIC LATERAL SCLEROSIS - A BIOCHEMICAL AND BIOLOGICAL ANALYSIS
K17I - ANGIOGENIN MUTANTS AND AMYOTROPHIC LATERAL SCLEROSIS - A BIOCHEMICAL AND BIOLOGICAL ANALYSIS
R121H - ANGIOGENIN MUTANTS AND AMYOTROPHIC LATERAL SCLEROSIS - A BIOCHEMICAL AND BIOLOGICAL ANALYSIS
K17E - ANGIOGENIN MUTANTS AND AMYOTROPHIC LATERAL SCLEROSIS - A BIOCHEMICAL AND BIOLOGICAL ANALYSIS
Q12L - ANGIOGENIN MUTANTS AND AMYOTROPHIC LATERAL SCLEROSIS - A BIOCHEMICAL AND BIOLOGICAL ANALYSIS
S28N - ANGIOGENIN MUTANTS AND AMYOTROPHIC LATERAL SCLEROSIS - A BIOCHEMICAL AND BIOLOGICAL ANALYSIS
K40I - ANGIOGENIN MUTANTS AND AMYOTROPHIC LATERAL SCLEROSIS - A BIOCHEMICAL AND BIOLOGICAL ANALYSIS
R31K - ANGIOGENIN MUTANTS AND AMYOTROPHIC LATERAL SCLEROSIS - A BIOCHEMICAL AND BIOLOGICAL ANALYSIS
P112L - ANGIOGENIN MUTANTS AND AMYOTROPHIC LATERAL SCLEROSIS - A BIOCHEMICAL AND BIOLOGICAL ANALYSIS
PDBE
Y
PDBE
2012-02-06
REL
REL
TLA
L(+)-TARTARIC ACID
HOH
water
ENGINEERED RESIDUE IN CHAIN A, VAL 137 TO ILE
1ANG
PDB ENTRY 1ANG
PDB
experimental model
TLA
1123
2
TLA
TLA
1123
A
HOH
2001
3
HOH
HOH
2001
A
HOH
2002
3
HOH
HOH
2002
A
HOH
2003
3
HOH
HOH
2003
A
HOH
2004
3
HOH
HOH
2004
A
HOH
2005
3
HOH
HOH
2005
A
HOH
2006
3
HOH
HOH
2006
A
HOH
2007
3
HOH
HOH
2007
A
HOH
2008
3
HOH
HOH
2008
A
HOH
2009
3
HOH
HOH
2009
A
HOH
2010
3
HOH
HOH
2010
A
HOH
2011
3
HOH
HOH
2011
A
HOH
2012
3
HOH
HOH
2012
A
HOH
2013
3
HOH
HOH
2013
A
HOH
2014
3
HOH
HOH
2014
A
HOH
2015
3
HOH
HOH
2015
A
HOH
2016
3
HOH
HOH
2016
A
HOH
2017
3
HOH
HOH
2017
A
HOH
2018
3
HOH
HOH
2018
A
HOH
2019
3
HOH
HOH
2019
A
HOH
2020
3
HOH
HOH
2020
A
HOH
2021
3
HOH
HOH
2021
A
HOH
2022
3
HOH
HOH
2022
A
HOH
2023
3
HOH
HOH
2023
A
HOH
2024
3
HOH
HOH
2024
A
HOH
2025
3
HOH
HOH
2025
A
HOH
2026
3
HOH
HOH
2026
A
HOH
2027
3
HOH
HOH
2027
A
HOH
2028
3
HOH
HOH
2028
A
HOH
2029
3
HOH
HOH
2029
A
HOH
2030
3
HOH
HOH
2030
A
HOH
2031
3
HOH
HOH
2031
A
HOH
2032
3
HOH
HOH
2032
A
HOH
2033
3
HOH
HOH
2033
A
HOH
2034
3
HOH
HOH
2034
A
HOH
2035
3
HOH
HOH
2035
A
HOH
2036
3
HOH
HOH
2036
A
HOH
2037
3
HOH
HOH
2037
A
HOH
2038
3
HOH
HOH
2038
A
HOH
2039
3
HOH
HOH
2039
A
HOH
2040
3
HOH
HOH
2040
A
HOH
2041
3
HOH
HOH
2041
A
HOH
2042
3
HOH
HOH
2042
A
HOH
2043
3
HOH
HOH
2043
A
HOH
2044
3
HOH
HOH
2044
A
HOH
2045
3
HOH
HOH
2045
A
HOH
2046
3
HOH
HOH
2046
A
HOH
2047
3
HOH
HOH
2047
A
HOH
2048
3
HOH
HOH
2048
A
HOH
2049
3
HOH
HOH
2049
A
HOH
2050
3
HOH
HOH
2050
A
HOH
2051
3
HOH
HOH
2051
A
HOH
2052
3
HOH
HOH
2052
A
HOH
2053
3
HOH
HOH
2053
A
HOH
2054
3
HOH
HOH
2054
A
HOH
2055
3
HOH
HOH
2055
A
HOH
2056
3
HOH
HOH
2056
A
HOH
2057
3
HOH
HOH
2057
A
HOH
2058
3
HOH
HOH
2058
A
HOH
2059
3
HOH
HOH
2059
A
HOH
2060
3
HOH
HOH
2060
A
HOH
2061
3
HOH
HOH
2061
A
HOH
2062
3
HOH
HOH
2062
A
HOH
2063
3
HOH
HOH
2063
A
HOH
2064
3
HOH
HOH
2064
A
HOH
2065
3
HOH
HOH
2065
A
HOH
2066
3
HOH
HOH
2066
A
HOH
2067
3
HOH
HOH
2067
A
HOH
2068
3
HOH
HOH
2068
A
HOH
2069
3
HOH
HOH
2069
A
HOH
2070
3
HOH
HOH
2070
A
HOH
2071
3
HOH
HOH
2071
A
HOH
2072
3
HOH
HOH
2072
A
HOH
2073
3
HOH
HOH
2073
A
HOH
2074
3
HOH
HOH
2074
A
HOH
2075
3
HOH
HOH
2075
A
HOH
2076
3
HOH
HOH
2076
A
HOH
2077
3
HOH
HOH
2077
A
HOH
2078
3
HOH
HOH
2078
A
HOH
2079
3
HOH
HOH
2079
A
HOH
2080
3
HOH
HOH
2080
A
HOH
2081
3
HOH
HOH
2081
A
HOH
2082
3
HOH
HOH
2082
A
HOH
2083
3
HOH
HOH
2083
A
HOH
2084
3
HOH
HOH
2084
A
HOH
2085
3
HOH
HOH
2085
A
HOH
2086
3
HOH
HOH
2086
A
HOH
2087
3
HOH
HOH
2087
A
HOH
2088
3
HOH
HOH
2088
A
HOH
2089
3
HOH
HOH
2089
A
HOH
2090
3
HOH
HOH
2090
A
HOH
2091
3
HOH
HOH
2091
A
HOH
2092
3
HOH
HOH
2092
A
HOH
2093
3
HOH
HOH
2093
A
HOH
2094
3
HOH
HOH
2094
A
HOH
2095
3
HOH
HOH
2095
A
HOH
2096
3
HOH
HOH
2096
A
HOH
2097
3
HOH
HOH
2097
A
HOH
2098
3
HOH
HOH
2098
A
HOH
2099
3
HOH
HOH
2099
A
n
1
1
A
n
2
2
A
ASN
3
n
3
ASN
3
A
SER
4
n
4
SER
4
A
ARG
5
n
5
ARG
5
A
TYR
6
n
6
TYR
6
A
THR
7
n
7
THR
7
A
HIS
8
n
8
HIS
8
A
PHE
9
n
9
PHE
9
A
LEU
10
n
10
LEU
10
A
THR
11
n
11
THR
11
A
GLN
12
n
12
GLN
12
A
HIS
13
n
13
HIS
13
A
TYR
14
n
14
TYR
14
A
ASP
15
n
15
ASP
15
A
ALA
16
n
16
ALA
16
A
LYS
17
n
17
LYS
17
A
PRO
18
n
18
PRO
18
A
GLN
19
n
19
GLN
19
A
GLY
20
n
20
GLY
20
A
ARG
21
n
21
ARG
21
A
ASP
22
n
22
ASP
22
A
ASP
23
n
23
ASP
23
A
ARG
24
n
24
ARG
24
A
TYR
25
n
25
TYR
25
A
CYS
26
n
26
CYS
26
A
GLU
27
n
27
GLU
27
A
SER
28
n
28
SER
28
A
ILE
29
n
29
ILE
29
A
MET
30
n
30
MET
30
A
ARG
31
n
31
ARG
31
A
ARG
32
n
32
ARG
32
A
ARG
33
n
33
ARG
33
A
GLY
34
n
34
GLY
34
A
LEU
35
n
35
LEU
35
A
THR
36
n
36
THR
36
A
SER
37
n
37
SER
37
A
PRO
38
n
38
PRO
38
A
CYS
39
n
39
CYS
39
A
LYS
40
n
40
LYS
40
A
ASP
41
n
41
ASP
41
A
ILE
42
n
42
ILE
42
A
ASN
43
n
43
ASN
43
A
THR
44
n
44
THR
44
A
PHE
45
n
45
PHE
45
A
ILE
46
n
46
ILE
46
A
HIS
47
n
47
HIS
47
A
GLY
48
n
48
GLY
48
A
ASN
49
n
49
ASN
49
A
LYS
50
n
50
LYS
50
A
ARG
51
n
51
ARG
51
A
SER
52
n
52
SER
52
A
ILE
53
n
53
ILE
53
A
LYS
54
n
54
LYS
54
A
ALA
55
n
55
ALA
55
A
ILE
56
n
56
ILE
56
A
CYS
57
n
57
CYS
57
A
GLU
58
n
58
GLU
58
A
ASN
59
n
59
ASN
59
A
LYS
60
n
60
LYS
60
A
ASN
61
n
61
ASN
61
A
GLY
62
n
62
GLY
62
A
ASN
63
n
63
ASN
63
A
PRO
64
n
64
PRO
64
A
HIS
65
n
65
HIS
65
A
ARG
66
n
66
ARG
66
A
GLU
67
n
67
GLU
67
A
ASN
68
n
68
ASN
68
A
LEU
69
n
69
LEU
69
A
ARG
70
n
70
ARG
70
A
ILE
71
n
71
ILE
71
A
SER
72
n
72
SER
72
A
LYS
73
n
73
LYS
73
A
SER
74
n
74
SER
74
A
SER
75
n
75
SER
75
A
PHE
76
n
76
PHE
76
A
GLN
77
n
77
GLN
77
A
VAL
78
n
78
VAL
78
A
THR
79
n
79
THR
79
A
THR
80
n
80
THR
80
A
CYS
81
n
81
CYS
81
A
LYS
82
n
82
LYS
82
A
LEU
83
n
83
LEU
83
A
HIS
84
n
84
HIS
84
A
GLY
85
n
85
GLY
85
A
GLY
86
n
86
GLY
86
A
SER
87
n
87
SER
87
A
PRO
88
n
88
PRO
88
A
TRP
89
n
89
TRP
89
A
PRO
90
n
90
PRO
90
A
PRO
91
n
91
PRO
91
A
CYS
92
n
92
CYS
92
A
GLN
93
n
93
GLN
93
A
TYR
94
n
94
TYR
94
A
ARG
95
n
95
ARG
95
A
ALA
96
n
96
ALA
96
A
THR
97
n
97
THR
97
A
ALA
98
n
98
ALA
98
A
GLY
99
n
99
GLY
99
A
PHE
100
n
100
PHE
100
A
ARG
101
n
101
ARG
101
A
ASN
102
n
102
ASN
102
A
VAL
103
n
103
VAL
103
A
VAL
104
n
104
VAL
104
A
VAL
105
n
105
VAL
105
A
ALA
106
n
106
ALA
106
A
CYS
107
n
107
CYS
107
A
GLU
108
n
108
GLU
108
A
ASN
109
n
109
ASN
109
A
GLY
110
n
110
GLY
110
A
LEU
111
n
111
LEU
111
A
PRO
112
n
112
PRO
112
A
ILE
113
n
113
ILE
113
A
HIS
114
n
114
HIS
114
A
LEU
115
n
115
LEU
115
A
ASP
116
n
116
ASP
116
A
GLN
117
n
117
GLN
117
A
SER
118
n
118
SER
118
A
ILE
119
n
119
ILE
119
A
PHE
120
n
120
PHE
120
A
ARG
121
n
121
ARG
121
A
ARG
122
n
122
ARG
122
A
n
123
123
A
author_and_software_defined_assembly
PISA
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
PHE
45
A
N
PHE
45
A
O
THR
79
A
O
THR
79
A
N
HIS
84
A
N
HIS
84
A
O
GLN
93
A
O
GLN
93
A
N
HIS
65
A
N
HIS
65
A
O
LEU
69
A
O
LEU
69
A
N
ARG
70
A
N
ARG
70
A
O
VAL
105
A
O
VAL
105
A
N
GLU
108
A
N
GLU
108
A
O
LEU
111
A
O
LEU
111
1
A
HOH
2025
C
HOH
1
A
HOH
2072
C
HOH
1
A
CG
ARG
122
A
CG
ARG
122
1
Y
1
A
CD
ARG
122
A
CD
ARG
122
1
Y
1
A
NE
ARG
122
A
NE
ARG
122
1
Y
1
A
CZ
ARG
122
A
CZ
ARG
122
1
Y
1
A
NH1
ARG
122
A
NH1
ARG
122
1
Y
1
A
NH2
ARG
122
A
NH2
ARG
122
1
Y
1
A
GLN
1
A
GLN
1
1
Y
1
A
ASP
2
A
ASP
2
1
Y
1
A
PRO
123
A
PRO
123
1
Y
1
A
A
NE2
O
GLN
HOH
19
2022
1.80
1
A
A
OE1
O
GLN
HOH
19
2064
1.21
1_555
1_554
1
A
ARG
21
90.51
20.62
1
A
ARG
66
46.29
-136.31
-5.0530
0.0000
0.0000
19.6176
0.0000
-14.5646
0.2211
0.1957
0.1982
1.960
29.571
1100
12013
9.2
89.30
0.20
1
0.08
MOLECULAR REPLACEMENT
24.56
0.90
1.11
PDB ENTRY 1ANG
ML
FLAT BULK SOLVENT MODEL
59.692
0.400
1.960
29.571
99
1072
10
0
963
0.007
998
1.053
1341
14.708
379
0.073
139
0.005
179
0.2037
0.1918
2.0492
93
981
66.00
0.2318
0.1894
2.1572
121
1184
79.00
0.2318
0.2002
2.2924
137
1334
89.00
0.2481
0.1960
2.4693
132
1453
95.00
0.2230
0.2091
2.7176
159
1455
97.00
0.2275
0.2053
3.1105
137
1495
97.00
0.2050
0.1764
3.9174
151
1495
97.00
0.2039
0.1934
29.5744
170
1516
94.00
24.80
1.96
50.00
4AHM
13478
0.0
0.05
1
29.00
7.5
92.1
0.18
1.96
2.03
7.10
1
6.6
69.0
refinement
PHENIX
(PHENIX.REFINE)
data reduction
HKL-2000
data scaling
HKL-2000
phasing
PHASER
V113I - Angiogenin mutants and amyotrophic lateral sclerosis - a biochemical and biological analysis
1
N
N
2
N
N
3
N
N
A
ASN
3
A
ASN
3
HELX_P
A
TYR
14
A
TYR
14
1
1
12
A
ASP
22
A
ASP
22
HELX_P
A
ARG
33
A
ARG
33
1
2
12
A
ASN
49
A
ASN
49
HELX_P
A
ALA
55
A
ALA
55
1
3
7
A
ILE
56
A
ILE
56
HELX_P
A
LYS
60
A
LYS
60
5
4
5
A
GLN
117
A
GLN
117
HELX_P
A
ARG
121
A
ARG
121
5
5
5
disulf
2.062
A
CYS
26
A
SG
CYS
26
1_555
A
CYS
81
A
SG
CYS
81
1_555
disulf
2.026
A
CYS
39
A
SG
CYS
39
1_555
A
CYS
92
A
SG
CYS
92
1_555
disulf
2.031
A
CYS
57
A
SG
CYS
57
1_555
A
CYS
107
A
SG
CYS
107
1_555
HYDROLASE
HYDROLASE, ANG, ALS, NEOVASCULARISATION
A
SER
37
A
SER
37
1
A
PRO
38
A
PRO
38
1.69
A
PRO
90
A
PRO
90
1
A
PRO
91
A
PRO
91
2.13
ANGI_HUMAN
UNP
1
P03950
25
147
4AHM
1
123
P03950
A
1
1
123
1
VAL
engineered mutation
ILE
113
4AHM
A
P03950
UNP
137
113
3
4
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ILE
42
A
ILE
42
A
ILE
46
A
ILE
46
A
PHE
76
A
PHE
76
A
HIS
84
A
HIS
84
A
GLN
93
A
GLN
93
A
ARG
101
A
ARG
101
A
GLY
62
A
GLY
62
A
HIS
65
A
HIS
65
A
LEU
69
A
LEU
69
A
SER
72
A
SER
72
A
VAL
104
A
VAL
104
A
GLU
108
A
GLU
108
A
LEU
111
A
LEU
111
A
LEU
115
A
LEU
115
BINDING SITE FOR RESIDUE TLA A 1123
A
TLA
1123
Software
9
A
HIS
65
A
HIS
65
9
3_655
A
ILE
71
A
ILE
71
9
3_655
A
GLY
99
A
GLY
99
9
1_555
A
PHE
100
A
PHE
100
9
1_555
A
ARG
101
A
ARG
101
9
3_655
A
HOH
2081
C
HOH
9
1_555
A
HOH
2083
C
HOH
9
1_555
A
HOH
2084
C
HOH
9
3_655
A
HOH
2099
C
HOH
9
1_555
20
C 2 2 21