0.010274
0.005932
0.000000
0.000000
0.011864
0.000000
0.000000
0.000000
0.005211
0.00000
0.00000
0.00000
Hardwick, S.W.
Gubbey, T.
Hug, I.
Jenal, U.
Luisi, B.F.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.00
90.00
120.00
97.329
97.329
191.910
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
O4 P -3
94.971
PHOSPHATE ION
non-polymer
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
P
N
274
N
O
N
275
N
O
N
276
N
O
N
277
N
O
N
278
N
N
N
279
S
C
N
280
N
C
N
281
N
O
N
282
N
C
N
283
N
C
N
284
N
C
N
285
N
O
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
N
N
296
S
C
N
297
N
C
N
298
N
O
N
299
N
C
N
300
N
O
N
301
N
O
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
N
N
310
S
C
N
311
N
C
N
312
N
O
N
313
R
C
N
314
N
O
N
315
N
C
N
316
N
O
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
N
N
327
S
C
N
328
N
C
N
329
N
O
N
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
N
Y
335
N
C
Y
336
N
C
Y
337
N
C
Y
338
N
C
Y
339
N
C
N
340
N
O
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
N
N
354
S
C
N
355
N
C
N
356
N
O
N
357
N
C
Y
358
N
C
Y
359
N
C
Y
360
N
C
Y
361
N
C
Y
362
N
C
Y
363
N
C
N
364
N
O
N
365
N
O
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
N
N
378
S
C
N
379
N
C
N
380
N
O
N
381
N
C
N
382
N
C
N
383
N
C
N
384
N
O
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
doub
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
doub
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
doub
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
doub
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
doub
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
doub
Y
326
N
sing
Y
327
N
sing
N
328
N
sing
Y
329
N
sing
Y
330
N
doub
N
331
N
sing
Y
332
N
doub
N
333
N
sing
Y
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
doub
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
Y
349
N
doub
Y
350
N
sing
Y
351
N
sing
N
352
N
sing
Y
353
N
doub
N
354
N
sing
Y
355
N
doub
N
356
N
sing
Y
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
doub
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
UK
Open Biol.
2046-2441
2
20028
10.1098/RSOB.120028
22724061
Crystal Structure of Caulobacter Crescentus Polynucleotide Phosphorylase Reveals a Mechanism of RNA Substrate Channelling and RNA Degradosome Assembly.
2012
10.2210/pdb4aim/pdb
pdb_00004aim
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2010-10-14
MARRESEARCH MX-300
SINGLE WAVELENGTH
M
x-ray
1
0.9778
1.0
I24
Diamond
0.9778
SYNCHROTRON
DIAMOND BEAMLINE I24
78145.383
POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE
2.7.7.8
1
man
polymer
1798.081
RIBONUCLEASE, RNE/RNG FAMILY PROTEIN
PNPASE BINDING PEPTIDE - GWW, RESIDUES 885-898
1
syn
polymer
94.971
PHOSPHATE ION
1
syn
non-polymer
18.015
water
2
nat
water
POLYNUCLEOTIDE PHOSPHORYLASE, PNPASE
RNASE E
no
no
MGSSHHHHHHSQSPMFDIKRKTIEWGGKTLVLETGRIARQADGAVLATMGETVVLATAVFAKSQKPGQDFFPLTVNYQEK
TFAAGKIPGGFFKREGRPSEKETLVSRLIDRPIRPLFVKGFKNEVQVVVTVLQHDLENDPDILGMVAASAALCLSGAPFM
GPIGAARVGWVDGAYVLNPTLDEMKESKMDLVVAGTADAVMMVESEIQELSEEIVLGGVNFAHQQMQAVIDAIIDLAEHA
AKEPFAFEPEDTDAIKAKMKDLVGADIAAAYKIQKKQDRYEAVGAAKKKAIAALGLSDENPTGYDPLKLGAIFKELEADV
VRRGILDTGLRIDGRDVKTVRPILGEVGILPRTHGSALFTRGETQAIVVATLGTGDDEQFIDALEGTYKESFLLHYNFPP
YSVGETGRMGSPGRREIGHGKLAWRALRPMLPTKEDFPYTIRLVSEITESNGSSSMATVCGSSLAMMDAGVPLVRPVSGI
AMGLILEQDGFAVLSDILGDEDHLGDMDFKVAGTSEGLTSLQMDIKIAGITPAIMEQALAQAKEGRAHILGEMNKAMDAP
RADVGDFAPKIETINIPTDKIREVIGSGGKVIREIVATTGAKVDINDDGVVKVSASDGAKIKAAIDWIKSITDEAEIGKI
YDGKVVKVVDFGAFVNFFGAKDGLVHVSQISNERVAKPSDVLKEGQMVKVKLLGFDDRGKTKLSMKVVDQETGEDLSKKE
AAAEEA
MGSSHHHHHHSQSPMFDIKRKTIEWGGKTLVLETGRIARQADGAVLATMGETVVLATAVFAKSQKPGQDFFPLTVNYQEK
TFAAGKIPGGFFKREGRPSEKETLVSRLIDRPIRPLFVKGFKNEVQVVVTVLQHDLENDPDILGMVAASAALCLSGAPFM
GPIGAARVGWVDGAYVLNPTLDEMKESKMDLVVAGTADAVMMVESEIQELSEEIVLGGVNFAHQQMQAVIDAIIDLAEHA
AKEPFAFEPEDTDAIKAKMKDLVGADIAAAYKIQKKQDRYEAVGAAKKKAIAALGLSDENPTGYDPLKLGAIFKELEADV
VRRGILDTGLRIDGRDVKTVRPILGEVGILPRTHGSALFTRGETQAIVVATLGTGDDEQFIDALEGTYKESFLLHYNFPP
YSVGETGRMGSPGRREIGHGKLAWRALRPMLPTKEDFPYTIRLVSEITESNGSSSMATVCGSSLAMMDAGVPLVRPVSGI
AMGLILEQDGFAVLSDILGDEDHLGDMDFKVAGTSEGLTSLQMDIKIAGITPAIMEQALAQAKEGRAHILGEMNKAMDAP
RADVGDFAPKIETINIPTDKIREVIGSGGKVIREIVATTGAKVDINDDGVVKVSASDGAKIKAAIDWIKSITDEAEIGKI
YDGKVVKVVDFGAFVNFFGAKDGLVHVSQISNERVAKPSDVLKEGQMVKVKLLGFDDRGKTKLSMKVVDQETGEDLSKKE
AAAEEA
A
polypeptide(L)
no
no
TAPPEKPRRGWWRR
TAPPEKPRRGWWRR
C
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
CB15
sample
19089
190650
CAULOBACTER VIBRIOIDES
469008
ESCHERICHIA COLI
BL21(DE3)
1
3.28
62.52
NONE
17 % WT/V PEG 3000, 0.1 M TRI-SODIUM CITRATE
chem_comp_atom
chem_comp_bond
database_2
pdbx_database_status
pdbx_initial_refinement_model
struct_site
repository
Initial release
Other
Database references
Source and taxonomy
Data collection
Database references
Derived calculations
Other
Refinement description
1
0
2012-04-18
1
1
2012-07-04
1
2
2014-02-05
1
3
2023-12-20
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.status_code_sf
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
CRYSTAL STRUCTURE OF C. CRESCENTUS PNPASE BOUND TO RNASE E RECOGNITION PEPTIDE
PDBE
Y
PDBE
2012-02-10
REL
REL
PO4
PHOSPHATE ION
HOH
water
155892
CAULOBACTER CRESCENTUS
CAULOBACTER VIBRIOIDES
sample
3GME
PDB ENTRY 3GME
PDB
experimental model
PO4
1697
3
PO4
PO4
1697
A
HOH
2001
4
HOH
HOH
2001
A
HOH
2002
4
HOH
HOH
2002
A
n
1
-13
A
n
2
-12
A
n
3
-11
A
n
4
-10
A
n
5
-9
A
n
6
-8
A
n
7
-7
A
n
8
-6
A
n
9
-5
A
n
10
-4
A
n
11
-3
A
n
12
-2
A
SER
-1
n
13
SER
-1
A
PRO
0
n
14
PRO
0
A
MET
1
n
15
MET
1
A
PHE
2
n
16
PHE
2
A
ASP
3
n
17
ASP
3
A
ILE
4
n
18
ILE
4
A
LYS
5
n
19
LYS
5
A
ARG
6
n
20
ARG
6
A
LYS
7
n
21
LYS
7
A
THR
8
n
22
THR
8
A
ILE
9
n
23
ILE
9
A
GLU
10
n
24
GLU
10
A
TRP
11
n
25
TRP
11
A
GLY
12
n
26
GLY
12
A
GLY
13
n
27
GLY
13
A
LYS
14
n
28
LYS
14
A
THR
15
n
29
THR
15
A
LEU
16
n
30
LEU
16
A
VAL
17
n
31
VAL
17
A
LEU
18
n
32
LEU
18
A
GLU
19
n
33
GLU
19
A
THR
20
n
34
THR
20
A
GLY
21
n
35
GLY
21
A
ARG
22
n
36
ARG
22
A
ILE
23
n
37
ILE
23
A
ALA
24
n
38
ALA
24
A
ARG
25
n
39
ARG
25
A
GLN
26
n
40
GLN
26
A
ALA
27
n
41
ALA
27
A
ASP
28
n
42
ASP
28
A
GLY
29
n
43
GLY
29
A
ALA
30
n
44
ALA
30
A
VAL
31
n
45
VAL
31
A
LEU
32
n
46
LEU
32
A
ALA
33
n
47
ALA
33
A
THR
34
n
48
THR
34
A
MET
35
n
49
MET
35
A
GLY
36
n
50
GLY
36
A
GLU
37
n
51
GLU
37
A
THR
38
n
52
THR
38
A
VAL
39
n
53
VAL
39
A
VAL
40
n
54
VAL
40
A
LEU
41
n
55
LEU
41
A
ALA
42
n
56
ALA
42
A
THR
43
n
57
THR
43
A
ALA
44
n
58
ALA
44
A
VAL
45
n
59
VAL
45
A
PHE
46
n
60
PHE
46
A
ALA
47
n
61
ALA
47
A
LYS
48
n
62
LYS
48
A
SER
49
n
63
SER
49
A
GLN
50
n
64
GLN
50
A
LYS
51
n
65
LYS
51
A
PRO
52
n
66
PRO
52
A
GLY
53
n
67
GLY
53
A
GLN
54
n
68
GLN
54
A
ASP
55
n
69
ASP
55
A
PHE
56
n
70
PHE
56
A
PHE
57
n
71
PHE
57
A
PRO
58
n
72
PRO
58
A
LEU
59
n
73
LEU
59
A
THR
60
n
74
THR
60
A
VAL
61
n
75
VAL
61
A
ASN
62
n
76
ASN
62
A
TYR
63
n
77
TYR
63
A
GLN
64
n
78
GLN
64
A
GLU
65
n
79
GLU
65
A
LYS
66
n
80
LYS
66
A
THR
67
n
81
THR
67
A
PHE
68
n
82
PHE
68
A
ALA
69
n
83
ALA
69
A
ALA
70
n
84
ALA
70
A
GLY
71
n
85
GLY
71
A
LYS
72
n
86
LYS
72
A
ILE
73
n
87
ILE
73
A
PRO
74
n
88
PRO
74
A
GLY
75
n
89
GLY
75
A
GLY
76
n
90
GLY
76
A
PHE
77
n
91
PHE
77
A
PHE
78
n
92
PHE
78
A
LYS
79
n
93
LYS
79
A
ARG
80
n
94
ARG
80
A
GLU
81
n
95
GLU
81
A
GLY
82
n
96
GLY
82
A
ARG
83
n
97
ARG
83
A
PRO
84
n
98
PRO
84
A
SER
85
n
99
SER
85
A
GLU
86
n
100
GLU
86
A
LYS
87
n
101
LYS
87
A
GLU
88
n
102
GLU
88
A
THR
89
n
103
THR
89
A
LEU
90
n
104
LEU
90
A
VAL
91
n
105
VAL
91
A
SER
92
n
106
SER
92
A
ARG
93
n
107
ARG
93
A
LEU
94
n
108
LEU
94
A
ILE
95
n
109
ILE
95
A
ASP
96
n
110
ASP
96
A
ARG
97
n
111
ARG
97
A
PRO
98
n
112
PRO
98
A
ILE
99
n
113
ILE
99
A
ARG
100
n
114
ARG
100
A
PRO
101
n
115
PRO
101
A
LEU
102
n
116
LEU
102
A
PHE
103
n
117
PHE
103
A
VAL
104
n
118
VAL
104
A
LYS
105
n
119
LYS
105
A
GLY
106
n
120
GLY
106
A
PHE
107
n
121
PHE
107
A
LYS
108
n
122
LYS
108
A
ASN
109
n
123
ASN
109
A
GLU
110
n
124
GLU
110
A
VAL
111
n
125
VAL
111
A
GLN
112
n
126
GLN
112
A
VAL
113
n
127
VAL
113
A
VAL
114
n
128
VAL
114
A
VAL
115
n
129
VAL
115
A
THR
116
n
130
THR
116
A
VAL
117
n
131
VAL
117
A
LEU
118
n
132
LEU
118
A
GLN
119
n
133
GLN
119
A
HIS
120
n
134
HIS
120
A
ASP
121
n
135
ASP
121
A
LEU
122
n
136
LEU
122
A
GLU
123
n
137
GLU
123
A
ASN
124
n
138
ASN
124
A
ASP
125
n
139
ASP
125
A
PRO
126
n
140
PRO
126
A
ASP
127
n
141
ASP
127
A
ILE
128
n
142
ILE
128
A
LEU
129
n
143
LEU
129
A
GLY
130
n
144
GLY
130
A
MET
131
n
145
MET
131
A
VAL
132
n
146
VAL
132
A
ALA
133
n
147
ALA
133
A
ALA
134
n
148
ALA
134
A
SER
135
n
149
SER
135
A
ALA
136
n
150
ALA
136
A
ALA
137
n
151
ALA
137
A
LEU
138
n
152
LEU
138
A
CYS
139
n
153
CYS
139
A
LEU
140
n
154
LEU
140
A
SER
141
n
155
SER
141
A
GLY
142
n
156
GLY
142
A
ALA
143
n
157
ALA
143
A
PRO
144
n
158
PRO
144
A
PHE
145
n
159
PHE
145
A
MET
146
n
160
MET
146
A
GLY
147
n
161
GLY
147
A
PRO
148
n
162
PRO
148
A
ILE
149
n
163
ILE
149
A
GLY
150
n
164
GLY
150
A
ALA
151
n
165
ALA
151
A
ALA
152
n
166
ALA
152
A
ARG
153
n
167
ARG
153
A
VAL
154
n
168
VAL
154
A
GLY
155
n
169
GLY
155
A
TRP
156
n
170
TRP
156
A
VAL
157
n
171
VAL
157
A
ASP
158
n
172
ASP
158
A
GLY
159
n
173
GLY
159
A
ALA
160
n
174
ALA
160
A
TYR
161
n
175
TYR
161
A
VAL
162
n
176
VAL
162
A
LEU
163
n
177
LEU
163
A
ASN
164
n
178
ASN
164
A
PRO
165
n
179
PRO
165
A
THR
166
n
180
THR
166
A
LEU
167
n
181
LEU
167
A
ASP
168
n
182
ASP
168
A
GLU
169
n
183
GLU
169
A
MET
170
n
184
MET
170
A
LYS
171
n
185
LYS
171
A
GLU
172
n
186
GLU
172
A
SER
173
n
187
SER
173
A
LYS
174
n
188
LYS
174
A
MET
175
n
189
MET
175
A
ASP
176
n
190
ASP
176
A
LEU
177
n
191
LEU
177
A
VAL
178
n
192
VAL
178
A
VAL
179
n
193
VAL
179
A
ALA
180
n
194
ALA
180
A
GLY
181
n
195
GLY
181
A
THR
182
n
196
THR
182
A
ALA
183
n
197
ALA
183
A
ASP
184
n
198
ASP
184
A
ALA
185
n
199
ALA
185
A
VAL
186
n
200
VAL
186
A
MET
187
n
201
MET
187
A
MET
188
n
202
MET
188
A
VAL
189
n
203
VAL
189
A
GLU
190
n
204
GLU
190
A
SER
191
n
205
SER
191
A
GLU
192
n
206
GLU
192
A
ILE
193
n
207
ILE
193
A
GLN
194
n
208
GLN
194
A
GLU
195
n
209
GLU
195
A
LEU
196
n
210
LEU
196
A
SER
197
n
211
SER
197
A
GLU
198
n
212
GLU
198
A
GLU
199
n
213
GLU
199
A
ILE
200
n
214
ILE
200
A
VAL
201
n
215
VAL
201
A
LEU
202
n
216
LEU
202
A
GLY
203
n
217
GLY
203
A
GLY
204
n
218
GLY
204
A
VAL
205
n
219
VAL
205
A
ASN
206
n
220
ASN
206
A
PHE
207
n
221
PHE
207
A
ALA
208
n
222
ALA
208
A
HIS
209
n
223
HIS
209
A
GLN
210
n
224
GLN
210
A
GLN
211
n
225
GLN
211
A
MET
212
n
226
MET
212
A
GLN
213
n
227
GLN
213
A
ALA
214
n
228
ALA
214
A
VAL
215
n
229
VAL
215
A
ILE
216
n
230
ILE
216
A
ASP
217
n
231
ASP
217
A
ALA
218
n
232
ALA
218
A
ILE
219
n
233
ILE
219
A
ILE
220
n
234
ILE
220
A
ASP
221
n
235
ASP
221
A
LEU
222
n
236
LEU
222
A
ALA
223
n
237
ALA
223
A
GLU
224
n
238
GLU
224
A
HIS
225
n
239
HIS
225
A
ALA
226
n
240
ALA
226
A
ALA
227
n
241
ALA
227
A
LYS
228
n
242
LYS
228
A
GLU
229
n
243
GLU
229
A
PRO
230
n
244
PRO
230
A
PHE
231
n
245
PHE
231
A
ALA
232
n
246
ALA
232
A
PHE
233
n
247
PHE
233
A
GLU
234
n
248
GLU
234
A
PRO
235
n
249
PRO
235
A
GLU
236
n
250
GLU
236
A
ASP
237
n
251
ASP
237
A
THR
238
n
252
THR
238
A
ASP
239
n
253
ASP
239
A
ALA
240
n
254
ALA
240
A
ILE
241
n
255
ILE
241
A
LYS
242
n
256
LYS
242
A
ALA
243
n
257
ALA
243
A
LYS
244
n
258
LYS
244
A
MET
245
n
259
MET
245
A
LYS
246
n
260
LYS
246
A
ASP
247
n
261
ASP
247
A
LEU
248
n
262
LEU
248
A
VAL
249
n
263
VAL
249
A
GLY
250
n
264
GLY
250
A
ALA
251
n
265
ALA
251
A
ASP
252
n
266
ASP
252
A
ILE
253
n
267
ILE
253
A
ALA
254
n
268
ALA
254
A
ALA
255
n
269
ALA
255
A
ALA
256
n
270
ALA
256
A
TYR
257
n
271
TYR
257
A
LYS
258
n
272
LYS
258
A
ILE
259
n
273
ILE
259
A
GLN
260
n
274
GLN
260
A
LYS
261
n
275
LYS
261
A
LYS
262
n
276
LYS
262
A
GLN
263
n
277
GLN
263
A
ASP
264
n
278
ASP
264
A
ARG
265
n
279
ARG
265
A
TYR
266
n
280
TYR
266
A
GLU
267
n
281
GLU
267
A
ALA
268
n
282
ALA
268
A
VAL
269
n
283
VAL
269
A
GLY
270
n
284
GLY
270
A
ALA
271
n
285
ALA
271
A
ALA
272
n
286
ALA
272
A
LYS
273
n
287
LYS
273
A
LYS
274
n
288
LYS
274
A
LYS
275
n
289
LYS
275
A
ALA
276
n
290
ALA
276
A
ILE
277
n
291
ILE
277
A
ALA
278
n
292
ALA
278
A
ALA
279
n
293
ALA
279
A
LEU
280
n
294
LEU
280
A
GLY
281
n
295
GLY
281
A
LEU
282
n
296
LEU
282
A
SER
283
n
297
SER
283
A
ASP
284
n
298
ASP
284
A
GLU
285
n
299
GLU
285
A
ASN
286
n
300
ASN
286
A
PRO
287
n
301
PRO
287
A
THR
288
n
302
THR
288
A
GLY
289
n
303
GLY
289
A
TYR
290
n
304
TYR
290
A
ASP
291
n
305
ASP
291
A
PRO
292
n
306
PRO
292
A
LEU
293
n
307
LEU
293
A
LYS
294
n
308
LYS
294
A
LEU
295
n
309
LEU
295
A
GLY
296
n
310
GLY
296
A
ALA
297
n
311
ALA
297
A
ILE
298
n
312
ILE
298
A
PHE
299
n
313
PHE
299
A
LYS
300
n
314
LYS
300
A
GLU
301
n
315
GLU
301
A
LEU
302
n
316
LEU
302
A
GLU
303
n
317
GLU
303
A
ALA
304
n
318
ALA
304
A
ASP
305
n
319
ASP
305
A
VAL
306
n
320
VAL
306
A
VAL
307
n
321
VAL
307
A
ARG
308
n
322
ARG
308
A
ARG
309
n
323
ARG
309
A
GLY
310
n
324
GLY
310
A
ILE
311
n
325
ILE
311
A
LEU
312
n
326
LEU
312
A
ASP
313
n
327
ASP
313
A
THR
314
n
328
THR
314
A
GLY
315
n
329
GLY
315
A
LEU
316
n
330
LEU
316
A
ARG
317
n
331
ARG
317
A
ILE
318
n
332
ILE
318
A
ASP
319
n
333
ASP
319
A
GLY
320
n
334
GLY
320
A
ARG
321
n
335
ARG
321
A
ASP
322
n
336
ASP
322
A
VAL
323
n
337
VAL
323
A
LYS
324
n
338
LYS
324
A
THR
325
n
339
THR
325
A
VAL
326
n
340
VAL
326
A
ARG
327
n
341
ARG
327
A
PRO
328
n
342
PRO
328
A
ILE
329
n
343
ILE
329
A
LEU
330
n
344
LEU
330
A
GLY
331
n
345
GLY
331
A
GLU
332
n
346
GLU
332
A
VAL
333
n
347
VAL
333
A
GLY
334
n
348
GLY
334
A
ILE
335
n
349
ILE
335
A
LEU
336
n
350
LEU
336
A
PRO
337
n
351
PRO
337
A
ARG
338
n
352
ARG
338
A
THR
339
n
353
THR
339
A
HIS
340
n
354
HIS
340
A
GLY
341
n
355
GLY
341
A
SER
342
n
356
SER
342
A
ALA
343
n
357
ALA
343
A
LEU
344
n
358
LEU
344
A
PHE
345
n
359
PHE
345
A
THR
346
n
360
THR
346
A
ARG
347
n
361
ARG
347
A
GLY
348
n
362
GLY
348
A
GLU
349
n
363
GLU
349
A
THR
350
n
364
THR
350
A
GLN
351
n
365
GLN
351
A
ALA
352
n
366
ALA
352
A
ILE
353
n
367
ILE
353
A
VAL
354
n
368
VAL
354
A
VAL
355
n
369
VAL
355
A
ALA
356
n
370
ALA
356
A
THR
357
n
371
THR
357
A
LEU
358
n
372
LEU
358
A
GLY
359
n
373
GLY
359
A
THR
360
n
374
THR
360
A
GLY
361
n
375
GLY
361
A
ASP
362
n
376
ASP
362
A
ASP
363
n
377
ASP
363
A
GLU
364
n
378
GLU
364
A
GLN
365
n
379
GLN
365
A
PHE
366
n
380
PHE
366
A
ILE
367
n
381
ILE
367
A
ASP
368
n
382
ASP
368
A
ALA
369
n
383
ALA
369
A
LEU
370
n
384
LEU
370
A
GLU
371
n
385
GLU
371
A
GLY
372
n
386
GLY
372
A
THR
373
n
387
THR
373
A
TYR
374
n
388
TYR
374
A
LYS
375
n
389
LYS
375
A
GLU
376
n
390
GLU
376
A
SER
377
n
391
SER
377
A
PHE
378
n
392
PHE
378
A
LEU
379
n
393
LEU
379
A
LEU
380
n
394
LEU
380
A
HIS
381
n
395
HIS
381
A
TYR
382
n
396
TYR
382
A
ASN
383
n
397
ASN
383
A
PHE
384
n
398
PHE
384
A
PRO
385
n
399
PRO
385
A
PRO
386
n
400
PRO
386
A
TYR
387
n
401
TYR
387
A
SER
388
n
402
SER
388
A
VAL
389
n
403
VAL
389
A
GLY
390
n
404
GLY
390
A
GLU
391
n
405
GLU
391
A
THR
392
n
406
THR
392
A
GLY
393
n
407
GLY
393
A
ARG
394
n
408
ARG
394
A
MET
395
n
409
MET
395
A
GLY
396
n
410
GLY
396
A
SER
397
n
411
SER
397
A
PRO
398
n
412
PRO
398
A
GLY
399
n
413
GLY
399
A
ARG
400
n
414
ARG
400
A
ARG
401
n
415
ARG
401
A
GLU
402
n
416
GLU
402
A
ILE
403
n
417
ILE
403
A
GLY
404
n
418
GLY
404
A
HIS
405
n
419
HIS
405
A
GLY
406
n
420
GLY
406
A
LYS
407
n
421
LYS
407
A
LEU
408
n
422
LEU
408
A
ALA
409
n
423
ALA
409
A
TRP
410
n
424
TRP
410
A
ARG
411
n
425
ARG
411
A
ALA
412
n
426
ALA
412
A
LEU
413
n
427
LEU
413
A
ARG
414
n
428
ARG
414
A
PRO
415
n
429
PRO
415
A
MET
416
n
430
MET
416
A
LEU
417
n
431
LEU
417
A
PRO
418
n
432
PRO
418
A
THR
419
n
433
THR
419
A
LYS
420
n
434
LYS
420
A
GLU
421
n
435
GLU
421
A
ASP
422
n
436
ASP
422
A
PHE
423
n
437
PHE
423
A
PRO
424
n
438
PRO
424
A
TYR
425
n
439
TYR
425
A
THR
426
n
440
THR
426
A
ILE
427
n
441
ILE
427
A
ARG
428
n
442
ARG
428
A
LEU
429
n
443
LEU
429
A
VAL
430
n
444
VAL
430
A
SER
431
n
445
SER
431
A
GLU
432
n
446
GLU
432
A
ILE
433
n
447
ILE
433
A
THR
434
n
448
THR
434
A
GLU
435
n
449
GLU
435
A
SER
436
n
450
SER
436
A
ASN
437
n
451
ASN
437
A
GLY
438
n
452
GLY
438
A
SER
439
n
453
SER
439
A
SER
440
n
454
SER
440
A
SER
441
n
455
SER
441
A
MET
442
n
456
MET
442
A
ALA
443
n
457
ALA
443
A
THR
444
n
458
THR
444
A
VAL
445
n
459
VAL
445
A
CYS
446
n
460
CYS
446
A
GLY
447
n
461
GLY
447
A
SER
448
n
462
SER
448
A
SER
449
n
463
SER
449
A
LEU
450
n
464
LEU
450
A
ALA
451
n
465
ALA
451
A
MET
452
n
466
MET
452
A
MET
453
n
467
MET
453
A
ASP
454
n
468
ASP
454
A
ALA
455
n
469
ALA
455
A
GLY
456
n
470
GLY
456
A
VAL
457
n
471
VAL
457
A
PRO
458
n
472
PRO
458
A
LEU
459
n
473
LEU
459
A
VAL
460
n
474
VAL
460
A
ARG
461
n
475
ARG
461
A
PRO
462
n
476
PRO
462
A
VAL
463
n
477
VAL
463
A
SER
464
n
478
SER
464
A
GLY
465
n
479
GLY
465
A
ILE
466
n
480
ILE
466
A
ALA
467
n
481
ALA
467
A
MET
468
n
482
MET
468
A
GLY
469
n
483
GLY
469
A
LEU
470
n
484
LEU
470
A
ILE
471
n
485
ILE
471
A
LEU
472
n
486
LEU
472
A
GLU
473
n
487
GLU
473
A
GLN
474
n
488
GLN
474
A
ASP
475
n
489
ASP
475
A
GLY
476
n
490
GLY
476
A
PHE
477
n
491
PHE
477
A
ALA
478
n
492
ALA
478
A
VAL
479
n
493
VAL
479
A
LEU
480
n
494
LEU
480
A
SER
481
n
495
SER
481
A
ASP
482
n
496
ASP
482
A
ILE
483
n
497
ILE
483
A
LEU
484
n
498
LEU
484
A
GLY
485
n
499
GLY
485
A
ASP
486
n
500
ASP
486
A
GLU
487
n
501
GLU
487
A
ASP
488
n
502
ASP
488
A
HIS
489
n
503
HIS
489
A
LEU
490
n
504
LEU
490
A
GLY
491
n
505
GLY
491
A
ASP
492
n
506
ASP
492
A
MET
493
n
507
MET
493
A
ASP
494
n
508
ASP
494
A
PHE
495
n
509
PHE
495
A
LYS
496
n
510
LYS
496
A
VAL
497
n
511
VAL
497
A
ALA
498
n
512
ALA
498
A
GLY
499
n
513
GLY
499
A
THR
500
n
514
THR
500
A
SER
501
n
515
SER
501
A
GLU
502
n
516
GLU
502
A
GLY
503
n
517
GLY
503
A
LEU
504
n
518
LEU
504
A
THR
505
n
519
THR
505
A
SER
506
n
520
SER
506
A
LEU
507
n
521
LEU
507
A
GLN
508
n
522
GLN
508
A
MET
509
n
523
MET
509
A
ASP
510
n
524
ASP
510
A
ILE
511
n
525
ILE
511
A
LYS
512
n
526
LYS
512
A
ILE
513
n
527
ILE
513
A
ALA
514
n
528
ALA
514
A
GLY
515
n
529
GLY
515
A
ILE
516
n
530
ILE
516
A
THR
517
n
531
THR
517
A
PRO
518
n
532
PRO
518
A
ALA
519
n
533
ALA
519
A
ILE
520
n
534
ILE
520
A
MET
521
n
535
MET
521
A
GLU
522
n
536
GLU
522
A
GLN
523
n
537
GLN
523
A
ALA
524
n
538
ALA
524
A
LEU
525
n
539
LEU
525
A
ALA
526
n
540
ALA
526
A
GLN
527
n
541
GLN
527
A
ALA
528
n
542
ALA
528
A
LYS
529
n
543
LYS
529
A
GLU
530
n
544
GLU
530
A
GLY
531
n
545
GLY
531
A
ARG
532
n
546
ARG
532
A
ALA
533
n
547
ALA
533
A
HIS
534
n
548
HIS
534
A
ILE
535
n
549
ILE
535
A
LEU
536
n
550
LEU
536
A
GLY
537
n
551
GLY
537
A
GLU
538
n
552
GLU
538
A
MET
539
n
553
MET
539
A
ASN
540
n
554
ASN
540
A
LYS
541
n
555
LYS
541
A
ALA
542
n
556
ALA
542
A
MET
543
n
557
MET
543
A
ASP
544
n
558
ASP
544
A
ALA
545
n
559
ALA
545
A
PRO
546
n
560
PRO
546
A
ARG
547
n
561
ARG
547
A
ALA
548
n
562
ALA
548
A
ASP
549
n
563
ASP
549
A
VAL
550
n
564
VAL
550
A
GLY
551
n
565
GLY
551
A
ASP
552
n
566
ASP
552
A
PHE
553
n
567
PHE
553
A
ALA
554
n
568
ALA
554
A
PRO
555
n
569
PRO
555
A
LYS
556
n
570
LYS
556
A
ILE
557
n
571
ILE
557
A
GLU
558
n
572
GLU
558
A
THR
559
n
573
THR
559
A
ILE
560
n
574
ILE
560
A
ASN
561
n
575
ASN
561
A
ILE
562
n
576
ILE
562
A
PRO
563
n
577
PRO
563
A
THR
564
n
578
THR
564
A
ASP
565
n
579
ASP
565
A
LYS
566
n
580
LYS
566
A
ILE
567
n
581
ILE
567
A
ARG
568
n
582
ARG
568
A
GLU
569
n
583
GLU
569
A
VAL
570
n
584
VAL
570
A
ILE
571
n
585
ILE
571
A
GLY
572
n
586
GLY
572
A
SER
573
n
587
SER
573
A
GLY
574
n
588
GLY
574
A
GLY
575
n
589
GLY
575
A
LYS
576
n
590
LYS
576
A
VAL
577
n
591
VAL
577
A
ILE
578
n
592
ILE
578
A
ARG
579
n
593
ARG
579
A
GLU
580
n
594
GLU
580
A
ILE
581
n
595
ILE
581
A
VAL
582
n
596
VAL
582
A
ALA
583
n
597
ALA
583
A
THR
584
n
598
THR
584
A
THR
585
n
599
THR
585
A
GLY
586
n
600
GLY
586
A
ALA
587
n
601
ALA
587
A
LYS
588
n
602
LYS
588
A
VAL
589
n
603
VAL
589
A
ASP
590
n
604
ASP
590
A
ILE
591
n
605
ILE
591
A
ASN
592
n
606
ASN
592
A
ASP
593
n
607
ASP
593
A
ASP
594
n
608
ASP
594
A
GLY
595
n
609
GLY
595
A
VAL
596
n
610
VAL
596
A
VAL
597
n
611
VAL
597
A
LYS
598
n
612
LYS
598
A
VAL
599
n
613
VAL
599
A
SER
600
n
614
SER
600
A
ALA
601
n
615
ALA
601
A
SER
602
n
616
SER
602
A
ASP
603
n
617
ASP
603
A
GLY
604
n
618
GLY
604
A
ALA
605
n
619
ALA
605
A
LYS
606
n
620
LYS
606
A
ILE
607
n
621
ILE
607
A
LYS
608
n
622
LYS
608
A
ALA
609
n
623
ALA
609
A
ALA
610
n
624
ALA
610
A
ILE
611
n
625
ILE
611
A
ASP
612
n
626
ASP
612
A
TRP
613
n
627
TRP
613
A
ILE
614
n
628
ILE
614
A
LYS
615
n
629
LYS
615
A
SER
616
n
630
SER
616
A
ILE
617
n
631
ILE
617
A
THR
618
n
632
THR
618
A
ASP
619
n
633
ASP
619
A
GLU
620
n
634
GLU
620
A
ALA
621
n
635
ALA
621
A
GLU
622
n
636
GLU
622
A
ILE
623
n
637
ILE
623
A
GLY
624
n
638
GLY
624
A
LYS
625
n
639
LYS
625
A
ILE
626
n
640
ILE
626
A
TYR
627
n
641
TYR
627
A
ASP
628
n
642
ASP
628
A
GLY
629
n
643
GLY
629
A
LYS
630
n
644
LYS
630
A
VAL
631
n
645
VAL
631
A
VAL
632
n
646
VAL
632
A
LYS
633
n
647
LYS
633
A
VAL
634
n
648
VAL
634
A
VAL
635
n
649
VAL
635
A
ASP
636
n
650
ASP
636
A
PHE
637
n
651
PHE
637
A
GLY
638
n
652
GLY
638
A
ALA
639
n
653
ALA
639
A
PHE
640
n
654
PHE
640
A
VAL
641
n
655
VAL
641
A
ASN
642
n
656
ASN
642
A
PHE
643
n
657
PHE
643
A
PHE
644
n
658
PHE
644
A
GLY
645
n
659
GLY
645
A
ALA
646
n
660
ALA
646
A
LYS
647
n
661
LYS
647
A
ASP
648
n
662
ASP
648
A
GLY
649
n
663
GLY
649
A
LEU
650
n
664
LEU
650
A
VAL
651
n
665
VAL
651
A
HIS
652
n
666
HIS
652
A
VAL
653
n
667
VAL
653
A
SER
654
n
668
SER
654
A
GLN
655
n
669
GLN
655
A
ILE
656
n
670
ILE
656
A
SER
657
n
671
SER
657
A
ASN
658
n
672
ASN
658
A
GLU
659
n
673
GLU
659
A
ARG
660
n
674
ARG
660
A
VAL
661
n
675
VAL
661
A
ALA
662
n
676
ALA
662
A
LYS
663
n
677
LYS
663
A
PRO
664
n
678
PRO
664
A
SER
665
n
679
SER
665
A
ASP
666
n
680
ASP
666
A
VAL
667
n
681
VAL
667
A
LEU
668
n
682
LEU
668
A
LYS
669
n
683
LYS
669
A
GLU
670
n
684
GLU
670
A
GLY
671
n
685
GLY
671
A
GLN
672
n
686
GLN
672
A
MET
673
n
687
MET
673
A
VAL
674
n
688
VAL
674
A
LYS
675
n
689
LYS
675
A
VAL
676
n
690
VAL
676
A
LYS
677
n
691
LYS
677
A
LEU
678
n
692
LEU
678
A
LEU
679
n
693
LEU
679
A
GLY
680
n
694
GLY
680
A
PHE
681
n
695
PHE
681
A
ASP
682
n
696
ASP
682
A
ASP
683
n
697
ASP
683
A
ARG
684
n
698
ARG
684
A
GLY
685
n
699
GLY
685
A
LYS
686
n
700
LYS
686
A
THR
687
n
701
THR
687
A
LYS
688
n
702
LYS
688
A
LEU
689
n
703
LEU
689
A
SER
690
n
704
SER
690
A
MET
691
n
705
MET
691
A
LYS
692
n
706
LYS
692
A
VAL
693
n
707
VAL
693
A
VAL
694
n
708
VAL
694
A
ASP
695
n
709
ASP
695
A
GLN
696
n
710
GLN
696
A
n
711
697
A
n
712
698
A
n
713
699
A
n
714
700
A
n
715
701
A
n
716
702
A
n
717
703
A
n
718
704
A
n
719
705
A
n
720
706
A
n
721
707
A
n
722
708
A
n
723
709
A
n
724
710
A
n
725
711
A
n
726
712
A
n
1
885
C
n
2
886
C
n
3
887
C
n
4
888
C
n
5
889
C
LYS
890
n
6
LYS
890
C
PRO
891
n
7
PRO
891
C
ARG
892
n
8
ARG
892
C
ARG
893
n
9
ARG
893
C
GLY
894
n
10
GLY
894
C
TRP
895
n
11
TRP
895
C
TRP
896
n
12
TRP
896
C
ARG
897
n
13
ARG
897
C
n
14
898
C
9.0218
7.5120
-4.7778
21.9036
-14.1048
9.0839
1.0108
-0.0410
-0.3593
1.1125
-0.3024
1.0630
-0.7110
0.1594
-0.7085
0.1232
0.0126
-0.0258
0.7689
-0.2520
0.2034
refined
-37.4778
-6.7915
100.0420
X-RAY DIFFRACTION
A
623
A
697
X-RAY DIFFRACTION
1
author_and_software_defined_assembly
PISA
6
hexameric
14230
-77.9
86990
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-0.5000000000
0.8660254038
0.0000000000
-0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
3_555
-x+y,-x,z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
-0.5000000000
-0.8660254038
0.0000000000
0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
2_555
-y,x-y,z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
A
N
TRP
11
A
N
TRP
25
A
O
LYS
14
A
O
LYS
28
A
N
GLU
19
A
N
GLU
33
A
O
LEU
32
A
O
LEU
46
A
N
MET
35
A
N
MET
49
A
O
THR
38
A
O
THR
52
A
N
VAL
45
A
N
VAL
59
A
O
GLN
112
A
O
GLN
126
A
N
VAL
113
A
N
VAL
127
A
O
THR
60
A
O
THR
74
A
N
VAL
162
A
N
VAL
176
A
O
GLY
155
A
O
GLY
169
A
N
VAL
154
A
N
VAL
168
A
O
LEU
177
A
O
LEU
191
A
O
ALA
180
A
O
ALA
194
A
N
MET
187
A
N
MET
201
A
N
ILE
193
A
N
ILE
207
A
O
THR
505
A
O
THR
519
A
N
ASP
510
A
N
ASP
524
A
O
ASP
494
A
O
ASP
508
A
N
GLY
499
A
N
GLY
513
A
O
SER
464
A
O
SER
478
A
N
LEU
330
A
N
LEU
344
A
O
THR
346
A
O
THR
360
A
N
ALA
343
A
N
ALA
357
A
O
VAL
354
A
O
VAL
368
A
N
VAL
355
A
N
VAL
369
A
O
VAL
430
A
O
VAL
444
A
N
SER
431
A
N
SER
445
A
O
HIS
381
A
O
HIS
395
A
N
ILE
367
A
N
ILE
381
A
O
TYR
374
A
O
TYR
388
A
N
ILE
471
A
N
ILE
485
A
O
ALA
478
A
O
ALA
492
A
N
ILE
560
A
N
ILE
574
A
O
VAL
597
A
O
VAL
611
A
N
SER
600
A
N
SER
614
A
O
LYS
588
A
O
LYS
602
A
N
VAL
651
A
N
VAL
665
A
O
ALA
639
A
O
ALA
653
A
N
ASN
642
A
N
ASN
656
A
O
LYS
630
A
O
LYS
644
A
N
GLY
629
A
N
GLY
643
A
O
VAL
674
A
O
VAL
688
A
N
GLY
680
A
N
GLY
694
A
O
LYS
688
A
O
LYS
702
1
A
OG
SER
-1
A
OG
SER
13
1
Y
1
A
CG
ARG
6
A
CG
ARG
20
1
Y
1
A
CD
ARG
6
A
CD
ARG
20
1
Y
1
A
NE
ARG
6
A
NE
ARG
20
1
Y
1
A
CZ
ARG
6
A
CZ
ARG
20
1
Y
1
A
NH1
ARG
6
A
NH1
ARG
20
1
Y
1
A
NH2
ARG
6
A
NH2
ARG
20
1
Y
1
A
CG
LYS
7
A
CG
LYS
21
1
Y
1
A
CD
LYS
7
A
CD
LYS
21
1
Y
1
A
CE
LYS
7
A
CE
LYS
21
1
Y
1
A
NZ
LYS
7
A
NZ
LYS
21
1
Y
1
A
CG
LYS
14
A
CG
LYS
28
1
Y
1
A
CD
LYS
14
A
CD
LYS
28
1
Y
1
A
CE
LYS
14
A
CE
LYS
28
1
Y
1
A
NZ
LYS
14
A
NZ
LYS
28
1
Y
1
A
CD
ARG
83
A
CD
ARG
97
1
Y
1
A
NE
ARG
83
A
NE
ARG
97
1
Y
1
A
CZ
ARG
83
A
CZ
ARG
97
1
Y
1
A
NH1
ARG
83
A
NH1
ARG
97
1
Y
1
A
NH2
ARG
83
A
NH2
ARG
97
1
Y
1
A
CD
LYS
105
A
CD
LYS
119
1
Y
1
A
CE
LYS
105
A
CE
LYS
119
1
Y
1
A
NZ
LYS
105
A
NZ
LYS
119
1
Y
1
A
CD
LYS
171
A
CD
LYS
185
1
Y
1
A
CE
LYS
171
A
CE
LYS
185
1
Y
1
A
NZ
LYS
171
A
NZ
LYS
185
1
Y
1
A
CG
GLU
172
A
CG
GLU
186
1
Y
1
A
CD
GLU
172
A
CD
GLU
186
1
Y
1
A
OE1
GLU
172
A
OE1
GLU
186
1
Y
1
A
OE2
GLU
172
A
OE2
GLU
186
1
Y
1
A
CG
ASP
221
A
CG
ASP
235
1
Y
1
A
OD1
ASP
221
A
OD1
ASP
235
1
Y
1
A
OD2
ASP
221
A
OD2
ASP
235
1
Y
1
A
CG
LYS
242
A
CG
LYS
256
1
Y
1
A
CD
LYS
242
A
CD
LYS
256
1
Y
1
A
CE
LYS
242
A
CE
LYS
256
1
Y
1
A
NZ
LYS
242
A
NZ
LYS
256
1
Y
1
A
CG
LYS
244
A
CG
LYS
258
1
Y
1
A
CD
LYS
244
A
CD
LYS
258
1
Y
1
A
CE
LYS
244
A
CE
LYS
258
1
Y
1
A
NZ
LYS
244
A
NZ
LYS
258
1
Y
1
A
CG
MET
245
A
CG
MET
259
1
Y
1
A
SD
MET
245
A
SD
MET
259
1
Y
1
A
CE
MET
245
A
CE
MET
259
1
Y
1
A
CG
LYS
246
A
CG
LYS
260
1
Y
1
A
CD
LYS
246
A
CD
LYS
260
1
Y
1
A
CE
LYS
246
A
CE
LYS
260
1
Y
1
A
NZ
LYS
246
A
NZ
LYS
260
1
Y
1
A
CG
LEU
248
A
CG
LEU
262
1
Y
1
A
CD1
LEU
248
A
CD1
LEU
262
1
Y
1
A
CD2
LEU
248
A
CD2
LEU
262
1
Y
1
A
CG
LYS
258
A
CG
LYS
272
1
Y
1
A
CD
LYS
258
A
CD
LYS
272
1
Y
1
A
CE
LYS
258
A
CE
LYS
272
1
Y
1
A
NZ
LYS
258
A
NZ
LYS
272
1
Y
1
A
CG
GLN
260
A
CG
GLN
274
1
Y
1
A
CD
GLN
260
A
CD
GLN
274
1
Y
1
A
OE1
GLN
260
A
OE1
GLN
274
1
Y
1
A
NE2
GLN
260
A
NE2
GLN
274
1
Y
1
A
CG
LYS
261
A
CG
LYS
275
1
Y
1
A
CD
LYS
261
A
CD
LYS
275
1
Y
1
A
CE
LYS
261
A
CE
LYS
275
1
Y
1
A
NZ
LYS
261
A
NZ
LYS
275
1
Y
1
A
CG
LYS
262
A
CG
LYS
276
1
Y
1
A
CD
LYS
262
A
CD
LYS
276
1
Y
1
A
CE
LYS
262
A
CE
LYS
276
1
Y
1
A
NZ
LYS
262
A
NZ
LYS
276
1
Y
1
A
CG
GLN
263
A
CG
GLN
277
1
Y
1
A
CD
GLN
263
A
CD
GLN
277
1
Y
1
A
OE1
GLN
263
A
OE1
GLN
277
1
Y
1
A
NE2
GLN
263
A
NE2
GLN
277
1
Y
1
A
CG
ASP
264
A
CG
ASP
278
1
Y
1
A
OD1
ASP
264
A
OD1
ASP
278
1
Y
1
A
OD2
ASP
264
A
OD2
ASP
278
1
Y
1
A
CG
ARG
265
A
CG
ARG
279
1
Y
1
A
CD
ARG
265
A
CD
ARG
279
1
Y
1
A
NE
ARG
265
A
NE
ARG
279
1
Y
1
A
CZ
ARG
265
A
CZ
ARG
279
1
Y
1
A
NH1
ARG
265
A
NH1
ARG
279
1
Y
1
A
NH2
ARG
265
A
NH2
ARG
279
1
Y
1
A
CG
GLU
267
A
CG
GLU
281
1
Y
1
A
CD
GLU
267
A
CD
GLU
281
1
Y
1
A
OE1
GLU
267
A
OE1
GLU
281
1
Y
1
A
OE2
GLU
267
A
OE2
GLU
281
1
Y
1
A
CG
LYS
273
A
CG
LYS
287
1
Y
1
A
CD
LYS
273
A
CD
LYS
287
1
Y
1
A
CE
LYS
273
A
CE
LYS
287
1
Y
1
A
NZ
LYS
273
A
NZ
LYS
287
1
Y
1
A
CG
LYS
274
A
CG
LYS
288
1
Y
1
A
CD
LYS
274
A
CD
LYS
288
1
Y
1
A
CE
LYS
274
A
CE
LYS
288
1
Y
1
A
NZ
LYS
274
A
NZ
LYS
288
1
Y
1
A
CG
LYS
275
A
CG
LYS
289
1
Y
1
A
CD
LYS
275
A
CD
LYS
289
1
Y
1
A
CE
LYS
275
A
CE
LYS
289
1
Y
1
A
NZ
LYS
275
A
NZ
LYS
289
1
Y
1
A
CG1
ILE
277
A
CG1
ILE
291
1
Y
1
A
CG2
ILE
277
A
CG2
ILE
291
1
Y
1
A
CD1
ILE
277
A
CD1
ILE
291
1
Y
1
A
CG
LEU
282
A
CG
LEU
296
1
Y
1
A
CD1
LEU
282
A
CD1
LEU
296
1
Y
1
A
CD2
LEU
282
A
CD2
LEU
296
1
Y
1
A
CG
GLU
285
A
CG
GLU
299
1
Y
1
A
CD
GLU
285
A
CD
GLU
299
1
Y
1
A
OE1
GLU
285
A
OE1
GLU
299
1
Y
1
A
OE2
GLU
285
A
OE2
GLU
299
1
Y
1
A
CG
ASN
286
A
CG
ASN
300
1
Y
1
A
OD1
ASN
286
A
OD1
ASN
300
1
Y
1
A
ND2
ASN
286
A
ND2
ASN
300
1
Y
1
A
CG
TYR
290
A
CG
TYR
304
1
Y
1
A
CD1
TYR
290
A
CD1
TYR
304
1
Y
1
A
CD2
TYR
290
A
CD2
TYR
304
1
Y
1
A
CE1
TYR
290
A
CE1
TYR
304
1
Y
1
A
CE2
TYR
290
A
CE2
TYR
304
1
Y
1
A
CZ
TYR
290
A
CZ
TYR
304
1
Y
1
A
OH
TYR
290
A
OH
TYR
304
1
Y
1
A
CG
LEU
293
A
CG
LEU
307
1
Y
1
A
CD1
LEU
293
A
CD1
LEU
307
1
Y
1
A
CD2
LEU
293
A
CD2
LEU
307
1
Y
1
A
CG
LYS
294
A
CG
LYS
308
1
Y
1
A
CD
LYS
294
A
CD
LYS
308
1
Y
1
A
CE
LYS
294
A
CE
LYS
308
1
Y
1
A
NZ
LYS
294
A
NZ
LYS
308
1
Y
1
A
CG
LEU
295
A
CG
LEU
309
1
Y
1
A
CD1
LEU
295
A
CD1
LEU
309
1
Y
1
A
CD2
LEU
295
A
CD2
LEU
309
1
Y
1
A
CG1
ILE
298
A
CG1
ILE
312
1
Y
1
A
CG2
ILE
298
A
CG2
ILE
312
1
Y
1
A
CD1
ILE
298
A
CD1
ILE
312
1
Y
1
A
CG
LYS
300
A
CG
LYS
314
1
Y
1
A
CD
LYS
300
A
CD
LYS
314
1
Y
1
A
CE
LYS
300
A
CE
LYS
314
1
Y
1
A
NZ
LYS
300
A
NZ
LYS
314
1
Y
1
A
CG
LYS
324
A
CG
LYS
338
1
Y
1
A
CD
LYS
324
A
CD
LYS
338
1
Y
1
A
CE
LYS
324
A
CE
LYS
338
1
Y
1
A
NZ
LYS
324
A
NZ
LYS
338
1
Y
1
A
NE
ARG
394
A
NE
ARG
408
1
Y
1
A
CZ
ARG
394
A
CZ
ARG
408
1
Y
1
A
NH1
ARG
394
A
NH1
ARG
408
1
Y
1
A
NH2
ARG
394
A
NH2
ARG
408
1
Y
1
A
CG
LYS
420
A
CG
LYS
434
1
Y
1
A
CD
LYS
420
A
CD
LYS
434
1
Y
1
A
CE
LYS
420
A
CE
LYS
434
1
Y
1
A
NZ
LYS
420
A
NZ
LYS
434
1
Y
1
A
CG
GLU
421
A
CG
GLU
435
1
Y
1
A
CD
GLU
421
A
CD
GLU
435
1
Y
1
A
OE1
GLU
421
A
OE1
GLU
435
1
Y
1
A
OE2
GLU
421
A
OE2
GLU
435
1
Y
1
A
CG
LEU
459
A
CG
LEU
473
1
Y
1
A
CD1
LEU
459
A
CD1
LEU
473
1
Y
1
A
CD2
LEU
459
A
CD2
LEU
473
1
Y
1
A
CG
GLN
474
A
CG
GLN
488
1
Y
1
A
CD
GLN
474
A
CD
GLN
488
1
Y
1
A
OE1
GLN
474
A
OE1
GLN
488
1
Y
1
A
NE2
GLN
474
A
NE2
GLN
488
1
Y
1
A
CG
HIS
489
A
CG
HIS
503
1
Y
1
A
ND1
HIS
489
A
ND1
HIS
503
1
Y
1
A
CD2
HIS
489
A
CD2
HIS
503
1
Y
1
A
CE1
HIS
489
A
CE1
HIS
503
1
Y
1
A
NE2
HIS
489
A
NE2
HIS
503
1
Y
1
A
CD
LYS
496
A
CD
LYS
510
1
Y
1
A
CE
LYS
496
A
CE
LYS
510
1
Y
1
A
NZ
LYS
496
A
NZ
LYS
510
1
Y
1
A
CD
LYS
512
A
CD
LYS
526
1
Y
1
A
CE
LYS
512
A
CE
LYS
526
1
Y
1
A
NZ
LYS
512
A
NZ
LYS
526
1
Y
1
A
CG
GLU
522
A
CG
GLU
536
1
Y
1
A
CD
GLU
522
A
CD
GLU
536
1
Y
1
A
OE1
GLU
522
A
OE1
GLU
536
1
Y
1
A
OE2
GLU
522
A
OE2
GLU
536
1
Y
1
A
CG
LYS
529
A
CG
LYS
543
1
Y
1
A
CD
LYS
529
A
CD
LYS
543
1
Y
1
A
CE
LYS
529
A
CE
LYS
543
1
Y
1
A
NZ
LYS
529
A
NZ
LYS
543
1
Y
1
A
CG
GLU
530
A
CG
GLU
544
1
Y
1
A
CD
GLU
530
A
CD
GLU
544
1
Y
1
A
OE1
GLU
530
A
OE1
GLU
544
1
Y
1
A
OE2
GLU
530
A
OE2
GLU
544
1
Y
1
A
CG
ASP
552
A
CG
ASP
566
1
Y
1
A
OD1
ASP
552
A
OD1
ASP
566
1
Y
1
A
OD2
ASP
552
A
OD2
ASP
566
1
Y
1
A
CG
LYS
556
A
CG
LYS
570
1
Y
1
A
CD
LYS
556
A
CD
LYS
570
1
Y
1
A
CE
LYS
556
A
CE
LYS
570
1
Y
1
A
NZ
LYS
556
A
NZ
LYS
570
1
Y
1
A
CG1
ILE
557
A
CG1
ILE
571
1
Y
1
A
CG2
ILE
557
A
CG2
ILE
571
1
Y
1
A
CD1
ILE
557
A
CD1
ILE
571
1
Y
1
A
CG
GLU
558
A
CG
GLU
572
1
Y
1
A
CD
GLU
558
A
CD
GLU
572
1
Y
1
A
OE1
GLU
558
A
OE1
GLU
572
1
Y
1
A
OE2
GLU
558
A
OE2
GLU
572
1
Y
1
A
CG
LYS
566
A
CG
LYS
580
1
Y
1
A
CD
LYS
566
A
CD
LYS
580
1
Y
1
A
CE
LYS
566
A
CE
LYS
580
1
Y
1
A
NZ
LYS
566
A
NZ
LYS
580
1
Y
1
A
CG1
ILE
567
A
CG1
ILE
581
1
Y
1
A
CG2
ILE
567
A
CG2
ILE
581
1
Y
1
A
CD1
ILE
567
A
CD1
ILE
581
1
Y
1
A
CG
ARG
568
A
CG
ARG
582
1
Y
1
A
CD
ARG
568
A
CD
ARG
582
1
Y
1
A
NE
ARG
568
A
NE
ARG
582
1
Y
1
A
CZ
ARG
568
A
CZ
ARG
582
1
Y
1
A
NH1
ARG
568
A
NH1
ARG
582
1
Y
1
A
NH2
ARG
568
A
NH2
ARG
582
1
Y
1
A
CG1
ILE
571
A
CG1
ILE
585
1
Y
1
A
CG2
ILE
571
A
CG2
ILE
585
1
Y
1
A
CD1
ILE
571
A
CD1
ILE
585
1
Y
1
A
CG
LYS
576
A
CG
LYS
590
1
Y
1
A
CD
LYS
576
A
CD
LYS
590
1
Y
1
A
CE
LYS
576
A
CE
LYS
590
1
Y
1
A
NZ
LYS
576
A
NZ
LYS
590
1
Y
1
A
CG1
ILE
578
A
CG1
ILE
592
1
Y
1
A
CG2
ILE
578
A
CG2
ILE
592
1
Y
1
A
CD1
ILE
578
A
CD1
ILE
592
1
Y
1
A
CG
ARG
579
A
CG
ARG
593
1
Y
1
A
CD
ARG
579
A
CD
ARG
593
1
Y
1
A
NE
ARG
579
A
NE
ARG
593
1
Y
1
A
CZ
ARG
579
A
CZ
ARG
593
1
Y
1
A
NH1
ARG
579
A
NH1
ARG
593
1
Y
1
A
NH2
ARG
579
A
NH2
ARG
593
1
Y
1
A
CG
GLU
580
A
CG
GLU
594
1
Y
1
A
CD
GLU
580
A
CD
GLU
594
1
Y
1
A
OE1
GLU
580
A
OE1
GLU
594
1
Y
1
A
OE2
GLU
580
A
OE2
GLU
594
1
Y
1
A
CG1
ILE
581
A
CG1
ILE
595
1
Y
1
A
CG2
ILE
581
A
CG2
ILE
595
1
Y
1
A
CD1
ILE
581
A
CD1
ILE
595
1
Y
1
A
CG1
VAL
582
A
CG1
VAL
596
1
Y
1
A
CG2
VAL
582
A
CG2
VAL
596
1
Y
1
A
CG
LYS
588
A
CG
LYS
602
1
Y
1
A
CD
LYS
588
A
CD
LYS
602
1
Y
1
A
CE
LYS
588
A
CE
LYS
602
1
Y
1
A
NZ
LYS
588
A
NZ
LYS
602
1
Y
1
A
CG
ASP
590
A
CG
ASP
604
1
Y
1
A
OD1
ASP
590
A
OD1
ASP
604
1
Y
1
A
OD2
ASP
590
A
OD2
ASP
604
1
Y
1
A
CG
ASP
594
A
CG
ASP
608
1
Y
1
A
OD1
ASP
594
A
OD1
ASP
608
1
Y
1
A
OD2
ASP
594
A
OD2
ASP
608
1
Y
1
A
CG1
VAL
596
A
CG1
VAL
610
1
Y
1
A
CG2
VAL
596
A
CG2
VAL
610
1
Y
1
A
CG
LYS
598
A
CG
LYS
612
1
Y
1
A
CD
LYS
598
A
CD
LYS
612
1
Y
1
A
CE
LYS
598
A
CE
LYS
612
1
Y
1
A
NZ
LYS
598
A
NZ
LYS
612
1
Y
1
A
CG1
VAL
599
A
CG1
VAL
613
1
Y
1
A
CG2
VAL
599
A
CG2
VAL
613
1
Y
1
A
CG
ASP
603
A
CG
ASP
617
1
Y
1
A
OD1
ASP
603
A
OD1
ASP
617
1
Y
1
A
OD2
ASP
603
A
OD2
ASP
617
1
Y
1
A
CG
LYS
606
A
CG
LYS
620
1
Y
1
A
CD
LYS
606
A
CD
LYS
620
1
Y
1
A
CE
LYS
606
A
CE
LYS
620
1
Y
1
A
NZ
LYS
606
A
NZ
LYS
620
1
Y
1
A
CG1
ILE
607
A
CG1
ILE
621
1
Y
1
A
CG2
ILE
607
A
CG2
ILE
621
1
Y
1
A
CD1
ILE
607
A
CD1
ILE
621
1
Y
1
A
CG
LYS
608
A
CG
LYS
622
1
Y
1
A
CD
LYS
608
A
CD
LYS
622
1
Y
1
A
CE
LYS
608
A
CE
LYS
622
1
Y
1
A
NZ
LYS
608
A
NZ
LYS
622
1
Y
1
A
CG1
ILE
611
A
CG1
ILE
625
1
Y
1
A
CG2
ILE
611
A
CG2
ILE
625
1
Y
1
A
CD1
ILE
611
A
CD1
ILE
625
1
Y
1
A
CG1
ILE
614
A
CG1
ILE
628
1
Y
1
A
CG2
ILE
614
A
CG2
ILE
628
1
Y
1
A
CD1
ILE
614
A
CD1
ILE
628
1
Y
1
A
CG
LYS
615
A
CG
LYS
629
1
Y
1
A
CD
LYS
615
A
CD
LYS
629
1
Y
1
A
CE
LYS
615
A
CE
LYS
629
1
Y
1
A
NZ
LYS
615
A
NZ
LYS
629
1
Y
1
A
CG
GLU
620
A
CG
GLU
634
1
Y
1
A
CD
GLU
620
A
CD
GLU
634
1
Y
1
A
OE1
GLU
620
A
OE1
GLU
634
1
Y
1
A
OE2
GLU
620
A
OE2
GLU
634
1
Y
1
A
CG
GLU
622
A
CG
GLU
636
1
Y
1
A
CD
GLU
622
A
CD
GLU
636
1
Y
1
A
OE1
GLU
622
A
OE1
GLU
636
1
Y
1
A
OE2
GLU
622
A
OE2
GLU
636
1
Y
1
A
CG1
ILE
623
A
CG1
ILE
637
1
Y
1
A
CG2
ILE
623
A
CG2
ILE
637
1
Y
1
A
CD1
ILE
623
A
CD1
ILE
637
1
Y
1
A
CG
LYS
625
A
CG
LYS
639
1
Y
1
A
CD
LYS
625
A
CD
LYS
639
1
Y
1
A
CE
LYS
625
A
CE
LYS
639
1
Y
1
A
NZ
LYS
625
A
NZ
LYS
639
1
Y
1
A
CG1
ILE
626
A
CG1
ILE
640
1
Y
1
A
CG2
ILE
626
A
CG2
ILE
640
1
Y
1
A
CD1
ILE
626
A
CD1
ILE
640
1
Y
1
A
CG
ASP
628
A
CG
ASP
642
1
Y
1
A
OD1
ASP
628
A
OD1
ASP
642
1
Y
1
A
OD2
ASP
628
A
OD2
ASP
642
1
Y
1
A
CG
LYS
630
A
CG
LYS
644
1
Y
1
A
CD
LYS
630
A
CD
LYS
644
1
Y
1
A
CE
LYS
630
A
CE
LYS
644
1
Y
1
A
NZ
LYS
630
A
NZ
LYS
644
1
Y
1
A
CG
LYS
633
A
CG
LYS
647
1
Y
1
A
CD
LYS
633
A
CD
LYS
647
1
Y
1
A
CE
LYS
633
A
CE
LYS
647
1
Y
1
A
NZ
LYS
633
A
NZ
LYS
647
1
Y
1
A
CG
PHE
644
A
CG
PHE
658
1
Y
1
A
CD1
PHE
644
A
CD1
PHE
658
1
Y
1
A
CD2
PHE
644
A
CD2
PHE
658
1
Y
1
A
CE1
PHE
644
A
CE1
PHE
658
1
Y
1
A
CE2
PHE
644
A
CE2
PHE
658
1
Y
1
A
CZ
PHE
644
A
CZ
PHE
658
1
Y
1
A
CD
LYS
647
A
CD
LYS
661
1
Y
1
A
CE
LYS
647
A
CE
LYS
661
1
Y
1
A
NZ
LYS
647
A
NZ
LYS
661
1
Y
1
A
CG1
VAL
653
A
CG1
VAL
667
1
Y
1
A
CG2
VAL
653
A
CG2
VAL
667
1
Y
1
A
CG
GLN
655
A
CG
GLN
669
1
Y
1
A
CD
GLN
655
A
CD
GLN
669
1
Y
1
A
OE1
GLN
655
A
OE1
GLN
669
1
Y
1
A
NE2
GLN
655
A
NE2
GLN
669
1
Y
1
A
CG
GLU
659
A
CG
GLU
673
1
Y
1
A
CD
GLU
659
A
CD
GLU
673
1
Y
1
A
OE1
GLU
659
A
OE1
GLU
673
1
Y
1
A
OE2
GLU
659
A
OE2
GLU
673
1
Y
1
A
CG
ARG
660
A
CG
ARG
674
1
Y
1
A
CD
ARG
660
A
CD
ARG
674
1
Y
1
A
NE
ARG
660
A
NE
ARG
674
1
Y
1
A
CZ
ARG
660
A
CZ
ARG
674
1
Y
1
A
NH1
ARG
660
A
NH1
ARG
674
1
Y
1
A
NH2
ARG
660
A
NH2
ARG
674
1
Y
1
A
CG
LYS
663
A
CG
LYS
677
1
Y
1
A
CD
LYS
663
A
CD
LYS
677
1
Y
1
A
CE
LYS
663
A
CE
LYS
677
1
Y
1
A
NZ
LYS
663
A
NZ
LYS
677
1
Y
1
A
CG
ASP
666
A
CG
ASP
680
1
Y
1
A
OD1
ASP
666
A
OD1
ASP
680
1
Y
1
A
OD2
ASP
666
A
OD2
ASP
680
1
Y
1
A
CG1
VAL
667
A
CG1
VAL
681
1
Y
1
A
CG2
VAL
667
A
CG2
VAL
681
1
Y
1
A
CG
LEU
668
A
CG
LEU
682
1
Y
1
A
CD1
LEU
668
A
CD1
LEU
682
1
Y
1
A
CD2
LEU
668
A
CD2
LEU
682
1
Y
1
A
CG
LYS
669
A
CG
LYS
683
1
Y
1
A
CD
LYS
669
A
CD
LYS
683
1
Y
1
A
CE
LYS
669
A
CE
LYS
683
1
Y
1
A
NZ
LYS
669
A
NZ
LYS
683
1
Y
1
A
CG
GLU
670
A
CG
GLU
684
1
Y
1
A
CD
GLU
670
A
CD
GLU
684
1
Y
1
A
OE1
GLU
670
A
OE1
GLU
684
1
Y
1
A
OE2
GLU
670
A
OE2
GLU
684
1
Y
1
A
CG
MET
673
A
CG
MET
687
1
Y
1
A
SD
MET
673
A
SD
MET
687
1
Y
1
A
CE
MET
673
A
CE
MET
687
1
Y
1
A
CG
LYS
675
A
CG
LYS
689
1
Y
1
A
CD
LYS
675
A
CD
LYS
689
1
Y
1
A
CE
LYS
675
A
CE
LYS
689
1
Y
1
A
NZ
LYS
675
A
NZ
LYS
689
1
Y
1
A
CG
LYS
677
A
CG
LYS
691
1
Y
1
A
CD
LYS
677
A
CD
LYS
691
1
Y
1
A
CE
LYS
677
A
CE
LYS
691
1
Y
1
A
NZ
LYS
677
A
NZ
LYS
691
1
Y
1
A
CG
LEU
679
A
CG
LEU
693
1
Y
1
A
CD1
LEU
679
A
CD1
LEU
693
1
Y
1
A
CD2
LEU
679
A
CD2
LEU
693
1
Y
1
A
CG
ASP
682
A
CG
ASP
696
1
Y
1
A
OD1
ASP
682
A
OD1
ASP
696
1
Y
1
A
OD2
ASP
682
A
OD2
ASP
696
1
Y
1
A
CG
ASP
683
A
CG
ASP
697
1
Y
1
A
OD1
ASP
683
A
OD1
ASP
697
1
Y
1
A
OD2
ASP
683
A
OD2
ASP
697
1
Y
1
A
CG
ARG
684
A
CG
ARG
698
1
Y
1
A
CD
ARG
684
A
CD
ARG
698
1
Y
1
A
NE
ARG
684
A
NE
ARG
698
1
Y
1
A
CZ
ARG
684
A
CZ
ARG
698
1
Y
1
A
NH1
ARG
684
A
NH1
ARG
698
1
Y
1
A
NH2
ARG
684
A
NH2
ARG
698
1
Y
1
A
CG
LYS
686
A
CG
LYS
700
1
Y
1
A
CD
LYS
686
A
CD
LYS
700
1
Y
1
A
CE
LYS
686
A
CE
LYS
700
1
Y
1
A
NZ
LYS
686
A
NZ
LYS
700
1
Y
1
A
CG
LYS
688
A
CG
LYS
702
1
Y
1
A
CD
LYS
688
A
CD
LYS
702
1
Y
1
A
CE
LYS
688
A
CE
LYS
702
1
Y
1
A
NZ
LYS
688
A
NZ
LYS
702
1
Y
1
A
CD
LYS
692
A
CD
LYS
706
1
Y
1
A
CE
LYS
692
A
CE
LYS
706
1
Y
1
A
NZ
LYS
692
A
NZ
LYS
706
1
Y
1
C
CG
LYS
890
B
CG
LYS
6
1
Y
1
C
CD
LYS
890
B
CD
LYS
6
1
Y
1
C
CE
LYS
890
B
CE
LYS
6
1
Y
1
C
NZ
LYS
890
B
NZ
LYS
6
1
Y
1
C
O
ARG
897
B
O
ARG
13
1
Y
1
C
CG
ARG
897
B
CG
ARG
13
1
Y
1
C
CD
ARG
897
B
CD
ARG
13
1
Y
1
C
NE
ARG
897
B
NE
ARG
13
1
Y
1
C
CZ
ARG
897
B
CZ
ARG
13
1
Y
1
C
NH1
ARG
897
B
NH1
ARG
13
1
Y
1
C
NH2
ARG
897
B
NH2
ARG
13
1
Y
1
A
MET
-13
A
MET
1
1
Y
1
A
GLY
-12
A
GLY
2
1
Y
1
A
SER
-11
A
SER
3
1
Y
1
A
SER
-10
A
SER
4
1
Y
1
A
HIS
-9
A
HIS
5
1
Y
1
A
HIS
-8
A
HIS
6
1
Y
1
A
HIS
-7
A
HIS
7
1
Y
1
A
HIS
-6
A
HIS
8
1
Y
1
A
HIS
-5
A
HIS
9
1
Y
1
A
HIS
-4
A
HIS
10
1
Y
1
A
SER
-3
A
SER
11
1
Y
1
A
GLN
-2
A
GLN
12
1
Y
1
A
GLU
697
A
GLU
711
1
Y
1
A
THR
698
A
THR
712
1
Y
1
A
GLY
699
A
GLY
713
1
Y
1
A
GLU
700
A
GLU
714
1
Y
1
A
ASP
701
A
ASP
715
1
Y
1
A
LEU
702
A
LEU
716
1
Y
1
A
SER
703
A
SER
717
1
Y
1
A
LYS
704
A
LYS
718
1
Y
1
A
LYS
705
A
LYS
719
1
Y
1
A
GLU
706
A
GLU
720
1
Y
1
A
ALA
707
A
ALA
721
1
Y
1
A
ALA
708
A
ALA
722
1
Y
1
A
ALA
709
A
ALA
723
1
Y
1
A
GLU
710
A
GLU
724
1
Y
1
A
GLU
711
A
GLU
725
1
Y
1
A
ALA
712
A
ALA
726
1
Y
1
C
THR
885
B
THR
1
1
Y
1
C
ALA
886
B
ALA
2
1
Y
1
C
PRO
887
B
PRO
3
1
Y
1
C
PRO
888
B
PRO
4
1
Y
1
C
GLU
889
B
GLU
5
1
Y
1
C
ARG
898
B
ARG
14
1
Y
1
A
A
O
OE1
ASN
GLN
206
210
2.05
1
A
A
O
CE
ILE
MET
656
691
2.07
1
A
A
O
N
VAL
PHE
635
637
2.09
1
A
A
O
N
ALA
ASP
646
648
2.11
1
A
A
O
N
GLY
SER
281
283
2.13
1
A
A
O
CD1
ALA
LEU
639
650
2.13
1
A
A
O
O
LYS
ALA
556
601
2.14
1
A
A
O
N
LYS
GLY
246
250
2.15
1
A
A
OH
O
TYR
ILE
161
200
2.15
1
A
A
O
N
VAL
GLY
635
638
2.15
1
A
A
OD1
CG2
ASP
THR
368
373
2.18
1
A
A
ILE
GLU
9
10
147.33
1
A
A
ALA
PRO
554
555
-148.47
1
A
A
NE2
O
GLN
PRO
119
337
1.99
1_555
3_555
1
A
MET
1
67.31
122.17
1
A
ILE
4
101.26
113.94
1
A
LYS
5
164.59
117.79
1
A
THR
8
-44.57
167.82
1
A
ILE
9
87.14
90.17
1
A
THR
20
-129.40
-158.61
1
A
ALA
30
-152.17
86.09
1
A
PRO
52
-42.54
-87.37
1
A
LYS
79
50.00
9.02
1
A
VAL
104
-28.73
127.40
1
A
LEU
122
52.17
14.83
1
A
GLU
123
-127.99
-60.76
1
A
ASP
158
62.76
-60.61
1
A
THR
166
-57.81
172.42
1
A
THR
182
-102.79
-168.63
1
A
ALA
226
172.83
-36.59
1
A
PRO
235
-50.01
102.42
1
A
ASP
239
-28.10
-58.78
1
A
ALA
255
-109.13
46.25
1
A
ALA
256
-137.56
-59.91
1
A
ILE
259
-55.59
100.80
1
A
GLN
263
-55.74
-106.79
1
A
VAL
269
-49.43
-79.46
1
A
ALA
271
-50.83
-85.71
1
A
ALA
272
-21.19
-69.53
1
A
LYS
273
-27.80
-92.18
1
A
LYS
274
-34.52
-75.22
1
A
LYS
275
-29.08
-73.34
1
A
ILE
277
-28.87
-49.99
1
A
ALA
278
-58.27
-101.06
1
A
ALA
279
-31.91
93.92
1
A
LEU
280
75.10
130.09
1
A
LEU
282
57.43
-44.04
1
A
SER
283
71.91
161.95
1
A
ASP
284
38.72
79.51
1
A
GLU
285
-65.39
-76.36
1
A
ASN
286
160.72
47.76
1
A
PRO
287
-2.21
-80.50
1
A
LEU
293
-66.53
-79.04
1
A
ALA
297
-27.32
-52.11
1
A
THR
314
71.86
115.94
1
A
VAL
323
-35.65
-27.46
1
A
GLU
332
-177.01
119.22
1
A
LEU
336
57.64
89.11
1
A
PRO
337
-72.19
-161.88
1
A
ARG
338
71.70
-39.30
1
A
HIS
340
-37.45
-29.83
1
A
ILE
367
-113.42
75.55
1
A
ASP
368
-58.74
80.09
1
A
LEU
379
-115.65
76.99
1
A
ARG
394
52.26
-142.92
1
A
MET
395
98.07
111.38
1
A
SER
397
37.47
65.86
1
A
MET
416
-85.63
38.53
1
A
PRO
424
-95.84
53.75
1
A
ILE
427
28.86
105.46
1
A
ARG
428
-80.58
-90.13
1
A
LEU
429
90.34
91.93
1
A
ASN
437
177.87
-15.34
1
A
LEU
450
-63.66
-74.18
1
A
PRO
458
-68.89
54.85
1
A
LEU
470
-172.77
90.66
1
A
ASP
475
-81.65
-74.01
1
A
PHE
477
177.19
154.95
1
A
ASP
482
47.22
70.91
1
A
HIS
489
-60.10
15.85
1
A
LEU
490
-141.02
-25.52
1
A
PHE
495
-173.06
149.68
1
A
LYS
541
-60.66
3.67
1
A
MET
543
-138.94
-62.44
1
A
ASP
544
61.62
-31.83
1
A
PRO
546
-46.98
150.40
1
A
ASP
549
-123.05
-160.34
1
A
ALA
554
-100.91
-148.14
1
A
ILE
557
83.90
80.03
1
A
ASP
565
-68.68
9.65
1
A
ASP
590
177.68
146.83
1
A
ILE
591
169.56
-59.02
1
A
ASN
592
11.49
-134.61
1
A
ASP
593
-167.87
-23.65
1
A
ALA
601
-179.10
-168.68
1
A
ASP
619
-54.50
-170.08
1
A
GLU
620
84.30
84.45
1
A
ALA
621
168.53
128.36
1
A
GLU
622
56.45
76.59
1
A
ILE
623
51.93
-109.67
1
A
LYS
625
75.08
87.61
1
A
ILE
626
-38.15
166.86
1
A
ASP
636
-51.61
71.81
1
A
PHE
637
173.45
-33.04
1
A
PHE
644
77.36
153.76
1
A
ALA
646
50.18
-71.02
1
A
LYS
647
-16.37
55.95
1
A
ASP
648
-56.63
-177.18
1
A
ILE
656
-100.93
-71.37
1
A
ASN
658
63.33
154.34
1
A
GLU
659
81.44
-49.14
1
A
ARG
660
172.76
138.86
1
A
ALA
662
44.12
-92.96
1
A
PRO
664
-49.05
50.00
1
A
ASP
666
-64.96
-73.54
1
A
VAL
667
-107.00
40.58
1
A
GLU
670
-47.26
96.96
1
A
PHE
681
-61.56
67.05
1
A
ASP
682
-48.60
164.32
1
A
ARG
684
-90.39
-104.14
1
A
LYS
686
-67.23
-162.01
1
A
THR
687
-153.62
80.19
1
A
LEU
689
169.27
136.26
1
A
LYS
692
-110.03
62.89
1
A
VAL
693
-106.38
70.18
96.546
-0.02
-0.01
0.00
-0.02
0.00
0.04
0.950
0.906
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.
0.26026
0.18553
0.18927
3.30
38.73
771
14616
5.0
99.20
25.049
0.420
RANDOM
1
THROUGHOUT
MOLECULAR REPLACEMENT
0.510
0.80
0.80
1.20
PDB ENTRY 3GME
MAXIMUM LIKELIHOOD
MASK
3.30
38.73
2
4957
5
0
4950
0.011
0.019
5038
1.703
1.963
6874
7.095
5.000
704
36.982
24.611
180
19.755
15.000
701
19.221
15.000
24
0.101
0.200
814
0.007
0.021
3850
0.303
0.208
3.385
64
1038
20
99.01
3.30
40.00
4AIM
15391
2.0
0.14
1
7.80
4.7
99.3
0.65
3.30
3.48
2.40
1
4.6
99.2
refinement
REFMAC
5.6.0117
data reduction
MOSFLM
data scaling
SCALA
phasing
PHASER
Crystal structure of C. crescentus PNPase bound to RNase E recognition peptide
1
N
N
2
N
N
3
N
N
4
N
N
A
THR
67
A
THR
81
HELX_P
A
GLY
71
A
GLY
85
5
1
5
A
SER
85
A
SER
99
HELX_P
A
ARG
100
A
ARG
114
1
2
16
A
ASP
125
A
ASP
139
HELX_P
A
GLY
142
A
GLY
156
1
3
18
A
THR
166
A
THR
180
HELX_P
A
GLU
172
A
GLU
186
1
4
7
A
SER
197
A
SER
211
HELX_P
A
HIS
225
A
HIS
239
1
5
29
A
THR
238
A
THR
252
HELX_P
A
GLY
250
A
GLY
264
1
6
13
A
LYS
261
A
LYS
275
HELX_P
A
ALA
279
A
ALA
293
1
7
19
A
LYS
294
A
LYS
308
HELX_P
A
ASP
313
A
ASP
327
1
8
20
A
PRO
385
A
PRO
399
HELX_P
A
GLY
390
A
GLY
404
5
9
6
A
GLY
399
A
GLY
413
HELX_P
A
ARG
411
A
ARG
425
1
10
13
A
SER
439
A
SER
453
HELX_P
A
GLY
456
A
GLY
470
1
11
18
A
LEU
484
A
LEU
498
HELX_P
A
HIS
489
A
HIS
503
1
12
6
A
THR
517
A
THR
531
HELX_P
A
LYS
541
A
LYS
555
1
13
25
A
PRO
563
A
PRO
577
HELX_P
A
ASP
565
A
ASP
579
5
14
3
A
LYS
566
A
LYS
580
HELX_P
A
GLY
572
A
GLY
586
1
15
7
A
GLY
575
A
GLY
589
HELX_P
A
GLY
586
A
GLY
600
1
16
12
A
ASP
603
A
ASP
617
HELX_P
A
ASP
619
A
ASP
633
1
17
17
TRANSFERASE/PEPTIDE
TRANSFERASE-PEPTIDE COMPLEX, KH DOMAIN, S1 DOMAIN, GWW PEPTIDE
A
ASP
3
A
ASP
17
1
A
ILE
4
A
ILE
18
-12.75
A
SER
283
A
SER
297
1
A
ASP
284
A
ASP
298
-8.63
A
ASP
284
A
ASP
298
1
A
GLU
285
A
GLU
299
-4.32
A
GLU
285
A
GLU
299
1
A
ASN
286
A
ASN
300
-4.95
A
THR
288
A
THR
302
1
A
GLY
289
A
GLY
303
3.67
A
PHE
553
A
PHE
567
1
A
ALA
554
A
ALA
568
13.03
A
LYS
556
A
LYS
570
1
A
ILE
557
A
ILE
571
-7.83
A
ASP
590
A
ASP
604
1
A
ILE
591
A
ILE
605
-0.96
A
ALA
621
A
ALA
635
1
A
GLU
622
A
GLU
636
-5.02
A
GLU
622
A
GLU
636
1
A
ILE
623
A
ILE
637
-4.71
A
GLY
624
A
GLY
638
1
A
LYS
625
A
LYS
639
-3.23
A
ASP
683
A
ASP
697
1
A
ARG
684
A
ARG
698
-4.54
A
VAL
693
A
VAL
707
1
A
VAL
694
A
VAL
708
9.04
A
VAL
694
A
VAL
708
1
A
ASP
695
A
ASP
709
-0.73
C
ARG
893
B
ARG
9
1
C
GLY
894
B
GLY
10
13.09
C
TRP
896
B
TRP
12
1
C
ARG
897
B
ARG
13
7.24
PNP_CAUCR
UNP
1
Q9AC32
Q9A749_CAUCR
UNP
2
Q9A749
1
712
4AIM
1
712
Q9AC32
A
1
15
726
885
898
4AIM
885
898
Q9A749
C
2
1
14
1
expression tag
MET
-13
4AIM
A
Q9AC32
UNP
1
1
expression tag
GLY
-12
4AIM
A
Q9AC32
UNP
2
1
expression tag
SER
-11
4AIM
A
Q9AC32
UNP
3
1
expression tag
SER
-10
4AIM
A
Q9AC32
UNP
4
1
expression tag
HIS
-9
4AIM
A
Q9AC32
UNP
5
1
expression tag
HIS
-8
4AIM
A
Q9AC32
UNP
6
1
expression tag
HIS
-7
4AIM
A
Q9AC32
UNP
7
1
expression tag
HIS
-6
4AIM
A
Q9AC32
UNP
8
1
expression tag
HIS
-5
4AIM
A
Q9AC32
UNP
9
1
expression tag
HIS
-4
4AIM
A
Q9AC32
UNP
10
1
expression tag
SER
-3
4AIM
A
Q9AC32
UNP
11
1
expression tag
GLN
-2
4AIM
A
Q9AC32
UNP
12
1
expression tag
SER
-1
4AIM
A
Q9AC32
UNP
13
1
expression tag
PRO
0
4AIM
A
Q9AC32
UNP
14
1
VAL
conflict
ILE
623
4AIM
A
Q9AC32
UNP
623
637
6
7
2
4
2
2
3
5
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
GLU
10
A
GLU
24
A
TRP
11
A
TRP
25
A
LYS
14
A
LYS
28
A
GLU
19
A
GLU
33
A
GLY
29
A
GLY
43
A
MET
35
A
MET
49
A
THR
38
A
THR
52
A
PHE
46
A
PHE
60
A
VAL
111
A
VAL
125
A
GLN
119
A
GLN
133
A
LEU
59
A
LEU
73
A
GLU
65
A
GLU
79
A
ALA
160
A
ALA
174
A
LEU
163
A
LEU
177
A
GLY
150
A
GLY
164
A
VAL
157
A
VAL
171
A
MET
175
A
MET
189
A
GLY
181
A
GLY
195
A
VAL
186
A
VAL
200
A
ILE
193
A
ILE
207
A
GLY
503
A
GLY
517
A
ILE
511
A
ILE
525
A
MET
493
A
MET
507
A
THR
500
A
THR
514
A
SER
464
A
SER
478
A
GLY
469
A
GLY
483
A
ILE
329
A
ILE
343
A
LEU
330
A
LEU
344
A
THR
346
A
THR
360
A
ARG
347
A
ARG
361
A
GLY
341
A
GLY
355
A
ALA
343
A
ALA
357
A
ALA
352
A
ALA
366
A
ALA
356
A
ALA
370
A
VAL
430
A
VAL
444
A
ILE
433
A
ILE
447
A
HIS
381
A
HIS
395
A
ASN
383
A
ASN
397
A
GLN
365
A
GLN
379
A
ILE
367
A
ILE
381
A
TYR
374
A
TYR
388
A
GLU
376
A
GLU
390
A
ILE
471
A
ILE
485
A
LEU
472
A
LEU
486
A
PHE
477
A
PHE
491
A
ALA
478
A
ALA
492
A
LYS
556
A
LYS
570
A
ASN
561
A
ASN
575
A
VAL
596
A
VAL
610
A
ALA
601
A
ALA
615
A
LYS
588
A
LYS
602
A
ASP
590
A
ASP
604
A
GLY
649
A
GLY
663
A
HIS
652
A
HIS
666
A
GLY
638
A
GLY
652
A
ASN
642
A
ASN
656
A
TYR
627
A
TYR
641
A
VAL
635
A
VAL
649
A
MET
673
A
MET
687
A
GLY
680
A
GLY
694
A
LYS
688
A
LYS
702
A
SER
690
A
SER
704
BINDING SITE FOR RESIDUE PO4 A 1697
A
PO4
1697
Software
4
A
ARG
401
A
ARG
415
4
1_555
A
HIS
405
A
HIS
419
4
1_555
A
SER
436
A
SER
450
4
1_555
A
GLY
438
A
GLY
452
4
1_555
173
P 63