0.011410 0.000000 0.000000 0.000000 0.011410 0.000000 0.000000 0.000000 0.004530 0.00000 0.00000 0.00000 Gangloff, M. Gay, N.J. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 16 90.00 90.00 90.00 87.643 87.643 220.741 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C8 H4 I3 N O4 558.835 5-amino-2,4,6-triiodobenzene-1,3-dicarboxylic acid 5-Amino-2,4,6-triiodoisophthalic acid non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C8 H15 N O6 221.208 2-acetamido-2-deoxy-beta-D-glucopyranose D-saccharide, beta linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking DK J.Appl.Crystallogr. JACGAR 0228 0021-8898 46 337 10.1107/S0021889812051606 23596340 Liesegang-Like Patterns of Toll Crystals Grown in Gel. 2013 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD 2010-01-24 ADSC QUANTUM 315 SINGLE WAVELENGTH M x-ray 1 1.7712 1.0 ID23-1 ESRF 1.7712 SYNCHROTRON ESRF BEAMLINE ID23-1 CHIMERIC PROTEIN 31957.838 TOLL RECEPTOR, VARIABLE LYMPHOCYTE RECEPTOR B.61 CHIMERA TOLL RECEPTOR (UNP RESIDUES 28-228), VARIABLE LYMPHOCYTE RECEPTOR B.61 (UNP RESIDUES 133-201) 2 man polymer 221.208 2-acetamido-2-deoxy-beta-D-glucopyranose 3 man non-polymer 558.835 5-amino-2,4,6-triiodobenzene-1,3-dicarboxylic acid 2 syn non-polymer TOLL, VARIABLE LYMPHOCYTE RECEPTOR B no no SFGRDACSEMSIDGLCQCAPIMSEYEIICPANAENPTFRLTIQPKDYVQIMCNLTDTTDYQQLPKKLRIGEVDRVQMRRC MLPGHTPIASILDYLGIVSPTTLIFESDNLGMNITRQHLDRLHGLKRFRFTTRRLTHIPANLLTDMRNLSHLELRANIEE MPSHLFDDLENLESIEFGSNKLRQMPRGIFGKMPKLKQLNLASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYL SRWLNKNSQKEQGSAKCSGSGKPVRSIICPTTGENLYFQ SFGRDACSEMSIDGLCQCAPIMSEYEIICPANAENPTFRLTIQPKDYVQIMCNLTDTTDYQQLPKKLRIGEVDRVQMRRC MLPGHTPIASILDYLGIVSPTTLIFESDNLGMNITRQHLDRLHGLKRFRFTTRRLTHIPANLLTDMRNLSHLELRANIEE MPSHLFDDLENLESIEFGSNKLRQMPRGIFGKMPKLKQLNLASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYL SRWLNKNSQKEQGSAKCSGSGKPVRSIICPTTGENLYFQ A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n FRUIT FLY sample 1 201 7227 DROSOPHILA MELANOGASTER SF9 7108 SPODOPTERA FRUGIPERDA BACULOVIRUS PFASTBAC-1 INSHORE HAGFISH sample 204 272 7764 EPTATRETUS BURGERI SF9 7108 SPODOPTERA FRUGIPERDA BACULOVIRUS PFASTBAC-1 1 3.43 63.86 NONE 7 SODIUM MALONATE AND 5-AMINO-2,4, 6-TRIIODOISOPHTHALIC ACID, pH 7 chem_comp entity pdbx_chem_comp_identifier pdbx_database_status pdbx_entity_nonpoly struct_conn struct_site struct_site_gen repository Initial release Carbohydrate remediation repository Remediation Database references Source and taxonomy Data collection Derived calculations Other Structure summary 1 0 2013-02-27 1 1 2013-05-01 1 2 2017-03-15 1 3 2020-07-29 _chem_comp.name _chem_comp.type _entity.pdbx_description _pdbx_database_status.status_code_sf _pdbx_entity_nonpoly.name _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_role DGlcpNAcb N-acetyl-b-D-glucopyranosamine b-D-GlcpNAc GlcNAc CRYSTAL STRUCTURE OF THE N-TERMINAL DOMAIN OF DROSOPHILA TOLL RECEPTOR PDBE Y PDBE 2012-04-26 REL REL NAG 2-acetamido-2-deoxy-beta-D-glucopyranose I3C 5-amino-2,4,6-triiodobenzene-1,3-dicarboxylic acid VARIABLE LYMPHOCYTE RECEPTOR B.61 (GENBANK AAZ16361) NAG 401 2 NAG NAG 401 A NAG 501 2 NAG NAG 501 A I3C 1300 3 I3C I3C 1300 A NAG 401 2 NAG NAG 401 B I3C 1300 3 I3C I3C 1300 B SER 28 n 1 SER 28 A PHE 29 n 2 PHE 29 A GLY 30 n 3 GLY 30 A ARG 31 n 4 ARG 31 A ASP 32 n 5 ASP 32 A ALA 33 n 6 ALA 33 A CYS 34 n 7 CYS 34 A SER 35 n 8 SER 35 A GLU 36 n 9 GLU 36 A MET 37 n 10 MET 37 A SER 38 n 11 SER 38 A ILE 39 n 12 ILE 39 A ASP 40 n 13 ASP 40 A GLY 41 n 14 GLY 41 A LEU 42 n 15 LEU 42 A CYS 43 n 16 CYS 43 A GLN 44 n 17 GLN 44 A CYS 45 n 18 CYS 45 A ALA 46 n 19 ALA 46 A PRO 47 n 20 PRO 47 A ILE 48 n 21 ILE 48 A MET 49 n 22 MET 49 A SER 50 n 23 SER 50 A GLU 51 n 24 GLU 51 A TYR 52 n 25 TYR 52 A GLU 53 n 26 GLU 53 A ILE 54 n 27 ILE 54 A ILE 55 n 28 ILE 55 A CYS 56 n 29 CYS 56 A PRO 57 n 30 PRO 57 A ALA 58 n 31 ALA 58 A ASN 59 n 32 ASN 59 A ALA 60 n 33 ALA 60 A GLU 61 n 34 GLU 61 A ASN 62 n 35 ASN 62 A PRO 63 n 36 PRO 63 A THR 64 n 37 THR 64 A PHE 65 n 38 PHE 65 A ARG 66 n 39 ARG 66 A LEU 67 n 40 LEU 67 A THR 68 n 41 THR 68 A ILE 69 n 42 ILE 69 A GLN 70 n 43 GLN 70 A PRO 71 n 44 PRO 71 A LYS 72 n 45 LYS 72 A ASP 73 n 46 ASP 73 A TYR 74 n 47 TYR 74 A VAL 75 n 48 VAL 75 A GLN 76 n 49 GLN 76 A ILE 77 n 50 ILE 77 A MET 78 n 51 MET 78 A CYS 79 n 52 CYS 79 A ASN 80 n 53 ASN 80 A LEU 81 n 54 LEU 81 A THR 82 n 55 THR 82 A ASP 83 n 56 ASP 83 A THR 84 n 57 THR 84 A THR 85 n 58 THR 85 A ASP 86 n 59 ASP 86 A TYR 87 n 60 TYR 87 A GLN 88 n 61 GLN 88 A GLN 89 n 62 GLN 89 A LEU 90 n 63 LEU 90 A PRO 91 n 64 PRO 91 A LYS 92 n 65 LYS 92 A LYS 93 n 66 LYS 93 A LEU 94 n 67 LEU 94 A ARG 95 n 68 ARG 95 A ILE 96 n 69 ILE 96 A GLY 97 n 70 GLY 97 A GLU 98 n 71 GLU 98 A VAL 99 n 72 VAL 99 A ASP 100 n 73 ASP 100 A ARG 101 n 74 ARG 101 A VAL 102 n 75 VAL 102 A GLN 103 n 76 GLN 103 A MET 104 n 77 MET 104 A ARG 105 n 78 ARG 105 A ARG 106 n 79 ARG 106 A CYS 107 n 80 CYS 107 A MET 108 n 81 MET 108 A LEU 109 n 82 LEU 109 A PRO 110 n 83 PRO 110 A GLY 111 n 84 GLY 111 A HIS 112 n 85 HIS 112 A THR 113 n 86 THR 113 A PRO 114 n 87 PRO 114 A ILE 115 n 88 ILE 115 A ALA 116 n 89 ALA 116 A SER 117 n 90 SER 117 A ILE 118 n 91 ILE 118 A LEU 119 n 92 LEU 119 A ASP 120 n 93 ASP 120 A TYR 121 n 94 TYR 121 A LEU 122 n 95 LEU 122 A GLY 123 n 96 GLY 123 A ILE 124 n 97 ILE 124 A VAL 125 n 98 VAL 125 A SER 126 n 99 SER 126 A PRO 127 n 100 PRO 127 A THR 128 n 101 THR 128 A THR 129 n 102 THR 129 A LEU 130 n 103 LEU 130 A ILE 131 n 104 ILE 131 A PHE 132 n 105 PHE 132 A GLU 133 n 106 GLU 133 A SER 134 n 107 SER 134 A ASP 135 n 108 ASP 135 A ASN 136 n 109 ASN 136 A LEU 137 n 110 LEU 137 A GLY 138 n 111 GLY 138 A MET 139 n 112 MET 139 A ASN 140 n 113 ASN 140 A ILE 141 n 114 ILE 141 A THR 142 n 115 THR 142 A ARG 143 n 116 ARG 143 A GLN 144 n 117 GLN 144 A HIS 145 n 118 HIS 145 A LEU 146 n 119 LEU 146 A ASP 147 n 120 ASP 147 A ARG 148 n 121 ARG 148 A LEU 149 n 122 LEU 149 A HIS 150 n 123 HIS 150 A GLY 151 n 124 GLY 151 A LEU 152 n 125 LEU 152 A LYS 153 n 126 LYS 153 A ARG 154 n 127 ARG 154 A PHE 155 n 128 PHE 155 A ARG 156 n 129 ARG 156 A PHE 157 n 130 PHE 157 A THR 158 n 131 THR 158 A THR 159 n 132 THR 159 A ARG 160 n 133 ARG 160 A ARG 161 n 134 ARG 161 A LEU 162 n 135 LEU 162 A THR 163 n 136 THR 163 A HIS 164 n 137 HIS 164 A ILE 165 n 138 ILE 165 A PRO 166 n 139 PRO 166 A ALA 167 n 140 ALA 167 A ASN 168 n 141 ASN 168 A LEU 169 n 142 LEU 169 A LEU 170 n 143 LEU 170 A THR 171 n 144 THR 171 A ASP 172 n 145 ASP 172 A MET 173 n 146 MET 173 A ARG 174 n 147 ARG 174 A ASN 175 n 148 ASN 175 A LEU 176 n 149 LEU 176 A SER 177 n 150 SER 177 A HIS 178 n 151 HIS 178 A LEU 179 n 152 LEU 179 A GLU 180 n 153 GLU 180 A LEU 181 n 154 LEU 181 A ARG 182 n 155 ARG 182 A ALA 183 n 156 ALA 183 A ASN 184 n 157 ASN 184 A ILE 185 n 158 ILE 185 A GLU 186 n 159 GLU 186 A GLU 187 n 160 GLU 187 A MET 188 n 161 MET 188 A PRO 189 n 162 PRO 189 A SER 190 n 163 SER 190 A HIS 191 n 164 HIS 191 A LEU 192 n 165 LEU 192 A PHE 193 n 166 PHE 193 A ASP 194 n 167 ASP 194 A ASP 195 n 168 ASP 195 A LEU 196 n 169 LEU 196 A GLU 197 n 170 GLU 197 A ASN 198 n 171 ASN 198 A LEU 199 n 172 LEU 199 A GLU 200 n 173 GLU 200 A SER 201 n 174 SER 201 A ILE 202 n 175 ILE 202 A GLU 203 n 176 GLU 203 A PHE 204 n 177 PHE 204 A GLY 205 n 178 GLY 205 A SER 206 n 179 SER 206 A ASN 207 n 180 ASN 207 A LYS 208 n 181 LYS 208 A LEU 209 n 182 LEU 209 A ARG 210 n 183 ARG 210 A GLN 211 n 184 GLN 211 A MET 212 n 185 MET 212 A PRO 213 n 186 PRO 213 A ARG 214 n 187 ARG 214 A GLY 215 n 188 GLY 215 A ILE 216 n 189 ILE 216 A PHE 217 n 190 PHE 217 A GLY 218 n 191 GLY 218 A LYS 219 n 192 LYS 219 A MET 220 n 193 MET 220 A PRO 221 n 194 PRO 221 A LYS 222 n 195 LYS 222 A LEU 223 n 196 LEU 223 A LYS 224 n 197 LYS 224 A GLN 225 n 198 GLN 225 A LEU 226 n 199 LEU 226 A ASN 227 n 200 ASN 227 A LEU 228 n 201 LEU 228 A ALA 229 n 202 ALA 229 A SER 230 n 203 SER 230 A ASN 231 n 204 ASN 231 A GLN 232 n 205 GLN 232 A LEU 233 n 206 LEU 233 A LYS 234 n 207 LYS 234 A SER 235 n 208 SER 235 A VAL 236 n 209 VAL 236 A PRO 237 n 210 PRO 237 A ASP 238 n 211 ASP 238 A GLY 239 n 212 GLY 239 A ILE 240 n 213 ILE 240 A PHE 241 n 214 PHE 241 A ASP 242 n 215 ASP 242 A ARG 243 n 216 ARG 243 A LEU 244 n 217 LEU 244 A THR 245 n 218 THR 245 A SER 246 n 219 SER 246 A LEU 247 n 220 LEU 247 A GLN 248 n 221 GLN 248 A LYS 249 n 222 LYS 249 A ILE 250 n 223 ILE 250 A TRP 251 n 224 TRP 251 A LEU 252 n 225 LEU 252 A HIS 253 n 226 HIS 253 A THR 254 n 227 THR 254 A ASN 255 n 228 ASN 255 A PRO 256 n 229 PRO 256 A TRP 257 n 230 TRP 257 A ASP 258 n 231 ASP 258 A CYS 259 n 232 CYS 259 A SER 260 n 233 SER 260 A CYS 261 n 234 CYS 261 A PRO 262 n 235 PRO 262 A ARG 263 n 236 ARG 263 A ILE 264 n 237 ILE 264 A ASP 265 n 238 ASP 265 A TYR 266 n 239 TYR 266 A LEU 267 n 240 LEU 267 A SER 268 n 241 SER 268 A ARG 269 n 242 ARG 269 A TRP 270 n 243 TRP 270 A LEU 271 n 244 LEU 271 A ASN 272 n 245 ASN 272 A LYS 273 n 246 LYS 273 A ASN 274 n 247 ASN 274 A SER 275 n 248 SER 275 A GLN 276 n 249 GLN 276 A LYS 277 n 250 LYS 277 A GLU 278 n 251 GLU 278 A GLN 279 n 252 GLN 279 A GLY 280 n 253 GLY 280 A SER 281 n 254 SER 281 A ALA 282 n 255 ALA 282 A LYS 283 n 256 LYS 283 A CYS 284 n 257 CYS 284 A SER 285 n 258 SER 285 A GLY 286 n 259 GLY 286 A SER 287 n 260 SER 287 A GLY 288 n 261 GLY 288 A LYS 289 n 262 LYS 289 A PRO 290 n 263 PRO 290 A VAL 291 n 264 VAL 291 A ARG 292 n 265 ARG 292 A SER 293 n 266 SER 293 A ILE 294 n 267 ILE 294 A ILE 295 n 268 ILE 295 A CYS 296 n 269 CYS 296 A PRO 297 n 270 PRO 297 A THR 298 n 271 THR 298 A THR 299 n 272 THR 299 A n 273 300 A n 274 301 A n 275 302 A n 276 303 A n 277 304 A n 278 305 A n 279 306 A SER 28 n 1 SER 28 B PHE 29 n 2 PHE 29 B GLY 30 n 3 GLY 30 B ARG 31 n 4 ARG 31 B ASP 32 n 5 ASP 32 B ALA 33 n 6 ALA 33 B CYS 34 n 7 CYS 34 B SER 35 n 8 SER 35 B GLU 36 n 9 GLU 36 B MET 37 n 10 MET 37 B SER 38 n 11 SER 38 B ILE 39 n 12 ILE 39 B ASP 40 n 13 ASP 40 B GLY 41 n 14 GLY 41 B LEU 42 n 15 LEU 42 B CYS 43 n 16 CYS 43 B GLN 44 n 17 GLN 44 B CYS 45 n 18 CYS 45 B ALA 46 n 19 ALA 46 B PRO 47 n 20 PRO 47 B ILE 48 n 21 ILE 48 B MET 49 n 22 MET 49 B SER 50 n 23 SER 50 B GLU 51 n 24 GLU 51 B TYR 52 n 25 TYR 52 B GLU 53 n 26 GLU 53 B ILE 54 n 27 ILE 54 B ILE 55 n 28 ILE 55 B CYS 56 n 29 CYS 56 B PRO 57 n 30 PRO 57 B ALA 58 n 31 ALA 58 B ASN 59 n 32 ASN 59 B ALA 60 n 33 ALA 60 B GLU 61 n 34 GLU 61 B ASN 62 n 35 ASN 62 B PRO 63 n 36 PRO 63 B THR 64 n 37 THR 64 B PHE 65 n 38 PHE 65 B ARG 66 n 39 ARG 66 B LEU 67 n 40 LEU 67 B THR 68 n 41 THR 68 B ILE 69 n 42 ILE 69 B GLN 70 n 43 GLN 70 B PRO 71 n 44 PRO 71 B LYS 72 n 45 LYS 72 B ASP 73 n 46 ASP 73 B TYR 74 n 47 TYR 74 B VAL 75 n 48 VAL 75 B GLN 76 n 49 GLN 76 B ILE 77 n 50 ILE 77 B MET 78 n 51 MET 78 B CYS 79 n 52 CYS 79 B ASN 80 n 53 ASN 80 B LEU 81 n 54 LEU 81 B THR 82 n 55 THR 82 B ASP 83 n 56 ASP 83 B THR 84 n 57 THR 84 B THR 85 n 58 THR 85 B ASP 86 n 59 ASP 86 B TYR 87 n 60 TYR 87 B GLN 88 n 61 GLN 88 B GLN 89 n 62 GLN 89 B LEU 90 n 63 LEU 90 B PRO 91 n 64 PRO 91 B LYS 92 n 65 LYS 92 B LYS 93 n 66 LYS 93 B LEU 94 n 67 LEU 94 B ARG 95 n 68 ARG 95 B ILE 96 n 69 ILE 96 B GLY 97 n 70 GLY 97 B GLU 98 n 71 GLU 98 B VAL 99 n 72 VAL 99 B ASP 100 n 73 ASP 100 B ARG 101 n 74 ARG 101 B VAL 102 n 75 VAL 102 B GLN 103 n 76 GLN 103 B MET 104 n 77 MET 104 B ARG 105 n 78 ARG 105 B ARG 106 n 79 ARG 106 B CYS 107 n 80 CYS 107 B MET 108 n 81 MET 108 B LEU 109 n 82 LEU 109 B PRO 110 n 83 PRO 110 B GLY 111 n 84 GLY 111 B HIS 112 n 85 HIS 112 B THR 113 n 86 THR 113 B PRO 114 n 87 PRO 114 B ILE 115 n 88 ILE 115 B ALA 116 n 89 ALA 116 B SER 117 n 90 SER 117 B ILE 118 n 91 ILE 118 B LEU 119 n 92 LEU 119 B ASP 120 n 93 ASP 120 B TYR 121 n 94 TYR 121 B LEU 122 n 95 LEU 122 B GLY 123 n 96 GLY 123 B ILE 124 n 97 ILE 124 B VAL 125 n 98 VAL 125 B SER 126 n 99 SER 126 B PRO 127 n 100 PRO 127 B THR 128 n 101 THR 128 B THR 129 n 102 THR 129 B LEU 130 n 103 LEU 130 B ILE 131 n 104 ILE 131 B PHE 132 n 105 PHE 132 B GLU 133 n 106 GLU 133 B SER 134 n 107 SER 134 B ASP 135 n 108 ASP 135 B ASN 136 n 109 ASN 136 B LEU 137 n 110 LEU 137 B GLY 138 n 111 GLY 138 B MET 139 n 112 MET 139 B ASN 140 n 113 ASN 140 B ILE 141 n 114 ILE 141 B THR 142 n 115 THR 142 B ARG 143 n 116 ARG 143 B GLN 144 n 117 GLN 144 B HIS 145 n 118 HIS 145 B LEU 146 n 119 LEU 146 B ASP 147 n 120 ASP 147 B ARG 148 n 121 ARG 148 B LEU 149 n 122 LEU 149 B HIS 150 n 123 HIS 150 B GLY 151 n 124 GLY 151 B LEU 152 n 125 LEU 152 B LYS 153 n 126 LYS 153 B ARG 154 n 127 ARG 154 B PHE 155 n 128 PHE 155 B ARG 156 n 129 ARG 156 B PHE 157 n 130 PHE 157 B THR 158 n 131 THR 158 B THR 159 n 132 THR 159 B ARG 160 n 133 ARG 160 B ARG 161 n 134 ARG 161 B LEU 162 n 135 LEU 162 B THR 163 n 136 THR 163 B HIS 164 n 137 HIS 164 B ILE 165 n 138 ILE 165 B PRO 166 n 139 PRO 166 B ALA 167 n 140 ALA 167 B ASN 168 n 141 ASN 168 B LEU 169 n 142 LEU 169 B LEU 170 n 143 LEU 170 B THR 171 n 144 THR 171 B ASP 172 n 145 ASP 172 B MET 173 n 146 MET 173 B ARG 174 n 147 ARG 174 B ASN 175 n 148 ASN 175 B LEU 176 n 149 LEU 176 B SER 177 n 150 SER 177 B HIS 178 n 151 HIS 178 B LEU 179 n 152 LEU 179 B GLU 180 n 153 GLU 180 B LEU 181 n 154 LEU 181 B ARG 182 n 155 ARG 182 B ALA 183 n 156 ALA 183 B ASN 184 n 157 ASN 184 B ILE 185 n 158 ILE 185 B GLU 186 n 159 GLU 186 B GLU 187 n 160 GLU 187 B MET 188 n 161 MET 188 B PRO 189 n 162 PRO 189 B SER 190 n 163 SER 190 B HIS 191 n 164 HIS 191 B LEU 192 n 165 LEU 192 B PHE 193 n 166 PHE 193 B ASP 194 n 167 ASP 194 B ASP 195 n 168 ASP 195 B LEU 196 n 169 LEU 196 B GLU 197 n 170 GLU 197 B ASN 198 n 171 ASN 198 B LEU 199 n 172 LEU 199 B GLU 200 n 173 GLU 200 B SER 201 n 174 SER 201 B ILE 202 n 175 ILE 202 B GLU 203 n 176 GLU 203 B PHE 204 n 177 PHE 204 B GLY 205 n 178 GLY 205 B SER 206 n 179 SER 206 B ASN 207 n 180 ASN 207 B LYS 208 n 181 LYS 208 B LEU 209 n 182 LEU 209 B ARG 210 n 183 ARG 210 B GLN 211 n 184 GLN 211 B MET 212 n 185 MET 212 B PRO 213 n 186 PRO 213 B ARG 214 n 187 ARG 214 B GLY 215 n 188 GLY 215 B ILE 216 n 189 ILE 216 B PHE 217 n 190 PHE 217 B GLY 218 n 191 GLY 218 B LYS 219 n 192 LYS 219 B MET 220 n 193 MET 220 B PRO 221 n 194 PRO 221 B LYS 222 n 195 LYS 222 B LEU 223 n 196 LEU 223 B LYS 224 n 197 LYS 224 B GLN 225 n 198 GLN 225 B LEU 226 n 199 LEU 226 B ASN 227 n 200 ASN 227 B LEU 228 n 201 LEU 228 B ALA 229 n 202 ALA 229 B SER 230 n 203 SER 230 B ASN 231 n 204 ASN 231 B GLN 232 n 205 GLN 232 B LEU 233 n 206 LEU 233 B LYS 234 n 207 LYS 234 B SER 235 n 208 SER 235 B VAL 236 n 209 VAL 236 B PRO 237 n 210 PRO 237 B ASP 238 n 211 ASP 238 B GLY 239 n 212 GLY 239 B ILE 240 n 213 ILE 240 B PHE 241 n 214 PHE 241 B ASP 242 n 215 ASP 242 B ARG 243 n 216 ARG 243 B LEU 244 n 217 LEU 244 B THR 245 n 218 THR 245 B SER 246 n 219 SER 246 B LEU 247 n 220 LEU 247 B GLN 248 n 221 GLN 248 B LYS 249 n 222 LYS 249 B ILE 250 n 223 ILE 250 B TRP 251 n 224 TRP 251 B LEU 252 n 225 LEU 252 B HIS 253 n 226 HIS 253 B THR 254 n 227 THR 254 B ASN 255 n 228 ASN 255 B PRO 256 n 229 PRO 256 B TRP 257 n 230 TRP 257 B ASP 258 n 231 ASP 258 B CYS 259 n 232 CYS 259 B SER 260 n 233 SER 260 B CYS 261 n 234 CYS 261 B PRO 262 n 235 PRO 262 B ARG 263 n 236 ARG 263 B ILE 264 n 237 ILE 264 B ASP 265 n 238 ASP 265 B TYR 266 n 239 TYR 266 B LEU 267 n 240 LEU 267 B SER 268 n 241 SER 268 B ARG 269 n 242 ARG 269 B TRP 270 n 243 TRP 270 B LEU 271 n 244 LEU 271 B ASN 272 n 245 ASN 272 B LYS 273 n 246 LYS 273 B ASN 274 n 247 ASN 274 B SER 275 n 248 SER 275 B GLN 276 n 249 GLN 276 B LYS 277 n 250 LYS 277 B GLU 278 n 251 GLU 278 B GLN 279 n 252 GLN 279 B GLY 280 n 253 GLY 280 B SER 281 n 254 SER 281 B ALA 282 n 255 ALA 282 B LYS 283 n 256 LYS 283 B CYS 284 n 257 CYS 284 B SER 285 n 258 SER 285 B GLY 286 n 259 GLY 286 B SER 287 n 260 SER 287 B GLY 288 n 261 GLY 288 B LYS 289 n 262 LYS 289 B PRO 290 n 263 PRO 290 B VAL 291 n 264 VAL 291 B ARG 292 n 265 ARG 292 B SER 293 n 266 SER 293 B ILE 294 n 267 ILE 294 B ILE 295 n 268 ILE 295 B CYS 296 n 269 CYS 296 B PRO 297 n 270 PRO 297 B THR 298 n 271 THR 298 B THR 299 n 272 THR 299 B n 273 300 B n 274 301 B n 275 302 B n 276 303 B n 277 304 B n 278 305 B n 279 306 B 4.9744 -0.8695 0.0517 0.7364 0.1478 1.1905 -0.0409 0.2176 0.0199 0.0020 0.0160 -0.0402 -0.1176 -0.1649 0.0249 -0.1729 -0.0692 0.0197 -0.2232 0.0270 -0.3040 refined -36.7230 -4.8601 4.8004 X-RAY DIFFRACTION 1.4690 -1.8889 0.1447 4.5826 -0.7038 0.9260 -0.0098 0.1601 -0.0329 0.0413 -0.1223 -0.0506 -0.1929 0.1662 0.1321 -0.2527 -0.0341 -0.0085 -0.1493 0.0096 -0.3040 refined -44.3195 -10.6522 30.6402 X-RAY DIFFRACTION X-RAY DIFFRACTION 1 CHAIN A X-RAY DIFFRACTION 2 CHAIN B author_and_software_defined_assembly PISA 1 monomeric author_and_software_defined_assembly PISA 1 monomeric A ASN 80 GLYCOSYLATION SITE A ASN 53 ASN A ASN 140 GLYCOSYLATION SITE A ASN 113 ASN B ASN 80 GLYCOSYLATION SITE B ASN 53 ASN 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N ILE 48 A N ILE 21 A O GLU 51 A O GLU 24 A N CYS 56 A N CYS 29 A O PHE 65 A O PHE 38 A N GLN 70 A N GLN 43 A O TYR 74 A O TYR 47 A N VAL 75 A N VAL 48 A O ARG 101 A O ARG 74 A N VAL 102 A N VAL 75 A O THR 129 A O THR 102 A N LEU 130 A N LEU 103 A O ARG 154 A O ARG 127 A N PHE 155 A N PHE 128 A O HIS 178 A O HIS 151 A N LEU 179 A N LEU 152 A O SER 201 A O SER 174 A N ILE 202 A N ILE 175 A O GLN 225 A O GLN 198 A N LEU 226 A N LEU 199 A O LYS 249 A O LYS 222 A O GLY 97 A O GLY 70 A N VAL 125 A N VAL 98 B N ILE 48 B N ILE 21 B O GLU 51 B O GLU 24 B N CYS 56 B N CYS 29 B O PHE 65 B O PHE 38 B N GLN 70 B N GLN 43 B O TYR 74 B O TYR 47 B N VAL 75 B N VAL 48 B O ARG 101 B O ARG 74 B N VAL 102 B N VAL 75 B O THR 129 B O THR 102 B N LEU 130 B N LEU 103 B O ARG 154 B O ARG 127 B N PHE 155 B N PHE 128 B O HIS 178 B O HIS 151 B N LEU 179 B N LEU 152 B O SER 201 B O SER 174 B N ILE 202 B N ILE 175 B O GLN 225 B O GLN 198 B N LEU 226 B N LEU 199 B O LYS 249 B O LYS 222 B O ILE 250 B O ILE 223 B N GLN 279 B N GLN 252 B O GLY 97 B O GLY 70 B N VAL 125 B N VAL 98 1 A GLY 300 A GLY 273 1 Y 1 A GLU 301 A GLU 274 1 Y 1 A ASN 302 A ASN 275 1 Y 1 A LEU 303 A LEU 276 1 Y 1 A TYR 304 A TYR 277 1 Y 1 A PHE 305 A PHE 278 1 Y 1 A GLN 306 A GLN 279 1 Y 1 B GLY 300 B GLY 273 1 Y 1 B GLU 301 B GLU 274 1 Y 1 B ASN 302 B ASN 275 1 Y 1 B LEU 303 B LEU 276 1 Y 1 B TYR 304 B TYR 277 1 Y 1 B PHE 305 B PHE 278 1 Y 1 B GLN 306 B GLN 279 1 Y 1 A MET 49 58.02 -100.97 1 A GLU 51 -119.19 -168.67 1 A ASN 59 77.78 -1.87 1 A ASP 73 -122.42 -65.30 1 A ASN 80 -153.80 77.59 1 A LYS 93 55.10 15.65 1 A SER 126 38.56 69.70 1 A ASP 172 73.00 -11.81 1 A ALA 183 -148.82 24.45 1 A HIS 191 -98.57 36.33 1 A LEU 196 -140.96 51.82 1 A PHE 217 -109.02 47.46 1 A ASN 231 -101.23 -156.72 1 B MET 49 67.10 -106.88 1 B ASP 73 -139.26 -71.62 1 B ASN 80 -153.20 75.04 1 B SER 126 32.34 71.40 1 B SER 134 -163.08 116.71 1 B ASN 136 -118.24 78.18 1 B ARG 182 -117.61 70.05 1 B HIS 191 -99.87 41.95 1 B ASN 207 -102.25 -162.27 1 B PHE 217 -114.90 53.81 1 B ASN 231 -106.64 -164.20 64.40 -4.6490 0.0000 0.0000 -4.6490 0.0000 9.2979 0.8909 0.8391 RESIDUES 300-304 ARE DISORDERED. ALL ATOMS HAVE CCP4 ATOM TYPE FROM LIBRARY 0.2539 0.2242 0.2257 3.00 46.70 918 17997 5.10 99.90 2.408 RANDOM 1 THROUGHOUT 0.0 SAD 0.375 0.375 NONE 0.467 3.00 46.70 0 4414 74 0 4340 0.007 4513 HARMONIC 2.00 0.93 6114 HARMONIC 2.00 2157 SINUSOIDAL 2.00 114 HARMONIC 2.00 667 HARMONIC 5.00 4513 HARMONIC 20.00 2.20 3.24 607 SEMIHARMONIC 5.00 4999 SEMIHARMONIC 4.00 0.2802 0.2540 0.2556 3.18 166 2666 2832 9 5.86 99.90 79.11 3.00 47.40 4ARR 31669 3.0 0.14 1 14.10 13.0 99.9 0.65 3.00 3.16 3.40 1 12.0 100.0 refinement BUSTER 2.10.0 data reduction XDS data scaling SCALA phasing PHENIX TOLL RECEPTOR, VARIABLE LYMPHOCYTE RECEPTOR B.61 CHIMERA Crystal structure of the N-terminal domain of Drosophila Toll receptor with the magic triangle I3C 1 N N 1 N N 2 N N 2 N N 3 N N 2 N N 3 N N A GLY 30 A GLY 3 HELX_P A GLY 41 A GLY 14 1 1 12 A ASP 83 A ASP 56 HELX_P A LEU 90 A LEU 63 5 2 8 A ILE 115 A ILE 88 HELX_P A LEU 122 A LEU 95 1 3 8 A THR 142 A THR 115 HELX_P A ASP 147 A ASP 120 5 4 6 A ILE 264 A ILE 237 HELX_P A ASN 274 A ASN 247 1 5 11 A VAL 291 A VAL 264 HELX_P A ILE 294 A ILE 267 5 6 4 B GLY 30 B GLY 3 HELX_P B GLY 41 B GLY 14 1 7 12 B ASP 83 B ASP 56 HELX_P B LEU 90 B LEU 63 5 8 8 B ILE 115 B ILE 88 HELX_P B LEU 122 B LEU 95 1 9 8 B ARG 143 B ARG 116 HELX_P B ASP 147 B ASP 120 5 10 5 B PRO 166 B PRO 139 HELX_P B THR 171 B THR 144 5 11 6 B ILE 264 B ILE 237 HELX_P B ASN 274 B ASN 247 1 12 11 B VAL 291 B VAL 264 HELX_P B ILE 294 B ILE 267 5 13 4 disulf 2.031 A CYS 34 A SG CYS 7 1_555 A CYS 45 A SG CYS 18 1_555 disulf 2.032 A CYS 43 A SG CYS 16 1_555 A CYS 56 A SG CYS 29 1_555 disulf 2.033 A CYS 79 A SG CYS 52 1_555 A CYS 107 A SG CYS 80 1_555 disulf 2.026 A CYS 259 A SG CYS 232 1_555 A CYS 284 A SG CYS 257 1_555 disulf 2.033 A CYS 261 A SG CYS 234 1_555 A CYS 296 A SG CYS 269 1_555 disulf 2.037 B CYS 34 B SG CYS 7 1_555 B CYS 45 B SG CYS 18 1_555 disulf 2.032 B CYS 43 B SG CYS 16 1_555 B CYS 56 B SG CYS 29 1_555 disulf 2.032 B CYS 79 B SG CYS 52 1_555 B CYS 107 B SG CYS 80 1_555 disulf 2.031 B CYS 259 B SG CYS 232 1_555 B CYS 284 B SG CYS 257 1_555 disulf 2.033 B CYS 261 B SG CYS 234 1_555 B CYS 296 B SG CYS 269 1_555 covale 1.434 one N-Glycosylation A ASN 80 A ND2 ASN 53 1_555 A NAG 401 C C1 NAG 1_555 covale 1.433 one N-Glycosylation A ASN 140 A ND2 ASN 113 1_555 A NAG 501 D C1 NAG 1_555 covale 1.433 one N-Glycosylation B ASN 80 B ND2 ASN 53 1_555 B NAG 401 F C1 NAG 1_555 IMMUNE SYSTEM IMMUNE SYSTEM, CYTOKINE RECEPTOR, EMBRYONIC DEVELOPMENT, INNATE IMMUNITY, LEUCINE-RICH REPEAT, LRR HYBRID TECHNOLOGY A CYS 56 A CYS 29 1 A PRO 57 A PRO 30 -3.87 A CYS 261 A CYS 234 1 A PRO 262 A PRO 235 2.59 B CYS 56 B CYS 29 1 B PRO 57 B PRO 30 -1.62 B CYS 261 B CYS 234 1 B PRO 262 B PRO 235 6.82 TOLL_DROME UNP 1 P08953 Q4G1L2_EPTBU UNP 1 Q4G1L2 28 228 4ARR 28 228 P08953 A 1 1 201 133 201 4ARR 231 299 Q4G1L2 A 2 204 272 28 228 4ARR 28 228 P08953 B 1 1 201 133 201 4ARR 231 299 Q4G1L2 B 2 204 272 1 cloning artifact ALA 229 4ARR A P08953 UNP 202 1 cloning artifact SER 230 4ARR A P08953 UNP 203 1 expression tag GLY 300 4ARR A P08953 UNP 273 1 expression tag GLU 301 4ARR A P08953 UNP 274 1 expression tag ASN 302 4ARR A P08953 UNP 275 1 expression tag LEU 303 4ARR A P08953 UNP 276 1 expression tag TYR 304 4ARR A P08953 UNP 277 1 expression tag PHE 305 4ARR A P08953 UNP 278 1 expression tag GLN 306 4ARR A P08953 UNP 279 3 cloning artifact ALA 229 4ARR B P08953 UNP 202 3 cloning artifact SER 230 4ARR B P08953 UNP 203 3 expression tag GLY 300 4ARR B P08953 UNP 273 3 expression tag GLU 301 4ARR B P08953 UNP 274 3 expression tag ASN 302 4ARR B P08953 UNP 275 3 expression tag LEU 303 4ARR B P08953 UNP 276 3 expression tag TYR 304 4ARR B P08953 UNP 277 3 expression tag PHE 305 4ARR B P08953 UNP 278 3 expression tag GLN 306 4ARR B P08953 UNP 279 11 2 12 2 anti-parallel anti-parallel anti-parallel parallel parallel parallel parallel parallel parallel parallel parallel anti-parallel anti-parallel anti-parallel parallel parallel parallel parallel parallel parallel parallel parallel parallel A GLN 44 A GLN 17 A ILE 48 A ILE 21 A GLU 51 A GLU 24 A CYS 56 A CYS 29 A PHE 65 A PHE 38 A GLN 70 A GLN 43 A TYR 74 A TYR 47 A CYS 79 A CYS 52 A ARG 101 A ARG 74 A ARG 105 A ARG 78 A THR 129 A THR 102 A GLU 133 A GLU 106 A ARG 154 A ARG 127 A THR 158 A THR 131 A HIS 178 A HIS 151 A ARG 182 A ARG 155 A SER 201 A SER 174 A GLU 203 A GLU 176 A GLN 225 A GLN 198 A ASN 227 A ASN 200 A LYS 249 A LYS 222 A TRP 251 A TRP 224 A GLY 97 A GLY 70 A GLU 98 A GLU 71 A ILE 124 A ILE 97 A VAL 125 A VAL 98 B GLN 44 B GLN 17 B ILE 48 B ILE 21 B GLU 51 B GLU 24 B CYS 56 B CYS 29 B PHE 65 B PHE 38 B GLN 70 B GLN 43 B TYR 74 B TYR 47 B CYS 79 B CYS 52 B ARG 101 B ARG 74 B ARG 105 B ARG 78 B THR 129 B THR 102 B GLU 133 B GLU 106 B ARG 154 B ARG 127 B THR 158 B THR 131 B HIS 178 B HIS 151 B ARG 182 B ARG 155 B SER 201 B SER 174 B GLU 203 B GLU 176 B GLN 225 B GLN 198 B ASN 227 B ASN 200 B LYS 249 B LYS 222 B TRP 251 B TRP 224 B GLU 278 B GLU 251 B GLN 279 B GLN 252 B GLY 97 B GLY 70 B GLU 98 B GLU 71 B ILE 124 B ILE 97 B VAL 125 B VAL 98 96 P 43 21 2