0.028987
0.000000
0.000000
0.000000
0.014962
0.000000
0.000000
0.000000
0.008519
0.00000
0.00000
0.00000
Cavazzini, D.
Meschi, F.
Corsini, R.
Bolchi, A.
Rossi, G.-L.
Einsle, O.
Ottonello, S.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
34.498
66.837
117.384
C2 H3 O2 -1
59.044
ACETATE ION
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C N S -1
58.082
THIOCYANATE ION
non-polymer
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
288
1533
10.1074/JBC.M112.384156
23192346
Autoproteolytic Activation of a Symbiosis-Regulated Truffle Phospholipase A2
2013
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
MIRRORS
IMAGE PLATE
MAR555 FLAT PANEL
GRAPHITE
SINGLE WAVELENGTH
M
x-ray
1
1.00
1.0
X12
EMBL/DESY, HAMBURG
1.00
SYNCHROTRON
EMBL/DESY, HAMBURG BEAMLINE X12
14213.929
PHOSPHOLIPASE A2 GROUP XIII
ACTIVE FORM, RESIDUES 89-211
2
man
polymer
59.044
ACETATE ION
2
syn
non-polymer
58.082
THIOCYANATE ION
1
syn
non-polymer
18.015
water
203
nat
water
no
no
AALSPVSDTDRLLYSTAMPAFLTAKRNKNPGNLDWSDDGCSKSPDRPAGFNFLDSCKRHDFGYRNYKKQHRFTEANRKRI
DDNFKKDLYNECAKYSGLESWKGVACRKIANTYYDAVRTFGWL
AALSPVSDTDRLLYSTAMPAFLTAKRNKNPGNLDWSDDGCSKSPDRPAGFNFLDSCKRHDFGYRNYKKQHRFTEANRKRI
DDNFKKDLYNECAKYSGLESWKGVACRKIANTYYDAVRTFGWL
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
WHITISH TRUFFLE
sample
42251
TUBER BORCHII
469008
ESCHERICHIA COLI
BL21(DE3)
CODONPLUS-RIL
PLASMID
PET28B
1
2.43
49.3
NONE
7.5
2.0 M AMMONIUM SULPHATE, 0.1 M HEPES, PH 7.5 2% PEG 200
diffrn_source
repository
Initial release
Database references
Data collection
1
0
2012-12-12
1
1
2013-01-30
1
2
2019-07-17
_diffrn_source.pdbx_synchrotron_site
PDBE
Y
PDBE
2012-05-18
REL
ACT
ACETATE ION
SCN
THIOCYANATE ION
HOH
water
STRUCTURE REPRESENTS AN AUTOPROTEOLYTICALLY PROCESSED
FRAGMENT OF THE ENTIRE SEQUENCE. THE FIRST 91 RESIDUES OF
THE FULL SEQUENCE ARE CLEAVED OFF.
GENBANK ACCESSION NUMBER AAF80454.1
ACT
1212
2
ACT
ACT
1212
A
SCN
1212
3
SCN
SCN
1212
B
ACT
1213
2
ACT
ACT
1213
B
HOH
2001
4
HOH
HOH
2001
A
HOH
2002
4
HOH
HOH
2002
A
HOH
2003
4
HOH
HOH
2003
A
HOH
2004
4
HOH
HOH
2004
A
HOH
2005
4
HOH
HOH
2005
A
HOH
2006
4
HOH
HOH
2006
A
HOH
2007
4
HOH
HOH
2007
A
HOH
2008
4
HOH
HOH
2008
A
HOH
2009
4
HOH
HOH
2009
A
HOH
2010
4
HOH
HOH
2010
A
HOH
2011
4
HOH
HOH
2011
A
HOH
2012
4
HOH
HOH
2012
A
HOH
2013
4
HOH
HOH
2013
A
HOH
2014
4
HOH
HOH
2014
A
HOH
2015
4
HOH
HOH
2015
A
HOH
2016
4
HOH
HOH
2016
A
HOH
2017
4
HOH
HOH
2017
A
HOH
2018
4
HOH
HOH
2018
A
HOH
2019
4
HOH
HOH
2019
A
HOH
2020
4
HOH
HOH
2020
A
HOH
2021
4
HOH
HOH
2021
A
HOH
2022
4
HOH
HOH
2022
A
HOH
2023
4
HOH
HOH
2023
A
HOH
2024
4
HOH
HOH
2024
A
HOH
2025
4
HOH
HOH
2025
A
HOH
2026
4
HOH
HOH
2026
A
HOH
2027
4
HOH
HOH
2027
A
HOH
2028
4
HOH
HOH
2028
A
HOH
2029
4
HOH
HOH
2029
A
HOH
2030
4
HOH
HOH
2030
A
HOH
2031
4
HOH
HOH
2031
A
HOH
2032
4
HOH
HOH
2032
A
HOH
2033
4
HOH
HOH
2033
A
HOH
2034
4
HOH
HOH
2034
A
HOH
2035
4
HOH
HOH
2035
A
HOH
2036
4
HOH
HOH
2036
A
HOH
2037
4
HOH
HOH
2037
A
HOH
2038
4
HOH
HOH
2038
A
HOH
2039
4
HOH
HOH
2039
A
HOH
2040
4
HOH
HOH
2040
A
HOH
2041
4
HOH
HOH
2041
A
HOH
2042
4
HOH
HOH
2042
A
HOH
2043
4
HOH
HOH
2043
A
HOH
2044
4
HOH
HOH
2044
A
HOH
2045
4
HOH
HOH
2045
A
HOH
2046
4
HOH
HOH
2046
A
HOH
2047
4
HOH
HOH
2047
A
HOH
2048
4
HOH
HOH
2048
A
HOH
2049
4
HOH
HOH
2049
A
HOH
2050
4
HOH
HOH
2050
A
HOH
2051
4
HOH
HOH
2051
A
HOH
2052
4
HOH
HOH
2052
A
HOH
2053
4
HOH
HOH
2053
A
HOH
2054
4
HOH
HOH
2054
A
HOH
2055
4
HOH
HOH
2055
A
HOH
2056
4
HOH
HOH
2056
A
HOH
2057
4
HOH
HOH
2057
A
HOH
2058
4
HOH
HOH
2058
A
HOH
2059
4
HOH
HOH
2059
A
HOH
2060
4
HOH
HOH
2060
A
HOH
2061
4
HOH
HOH
2061
A
HOH
2062
4
HOH
HOH
2062
A
HOH
2063
4
HOH
HOH
2063
A
HOH
2064
4
HOH
HOH
2064
A
HOH
2065
4
HOH
HOH
2065
A
HOH
2066
4
HOH
HOH
2066
A
HOH
2067
4
HOH
HOH
2067
A
HOH
2068
4
HOH
HOH
2068
A
HOH
2069
4
HOH
HOH
2069
A
HOH
2070
4
HOH
HOH
2070
A
HOH
2071
4
HOH
HOH
2071
A
HOH
2072
4
HOH
HOH
2072
A
HOH
2073
4
HOH
HOH
2073
A
HOH
2074
4
HOH
HOH
2074
A
HOH
2075
4
HOH
HOH
2075
A
HOH
2076
4
HOH
HOH
2076
A
HOH
2077
4
HOH
HOH
2077
A
HOH
2078
4
HOH
HOH
2078
A
HOH
2079
4
HOH
HOH
2079
A
HOH
2080
4
HOH
HOH
2080
A
HOH
2081
4
HOH
HOH
2081
A
HOH
2082
4
HOH
HOH
2082
A
HOH
2083
4
HOH
HOH
2083
A
HOH
2084
4
HOH
HOH
2084
A
HOH
2085
4
HOH
HOH
2085
A
HOH
2086
4
HOH
HOH
2086
A
HOH
2087
4
HOH
HOH
2087
A
HOH
2088
4
HOH
HOH
2088
A
HOH
2089
4
HOH
HOH
2089
A
HOH
2090
4
HOH
HOH
2090
A
HOH
2091
4
HOH
HOH
2091
A
HOH
2092
4
HOH
HOH
2092
A
HOH
2093
4
HOH
HOH
2093
A
HOH
2094
4
HOH
HOH
2094
A
HOH
2001
4
HOH
HOH
2001
B
HOH
2002
4
HOH
HOH
2002
B
HOH
2003
4
HOH
HOH
2003
B
HOH
2004
4
HOH
HOH
2004
B
HOH
2005
4
HOH
HOH
2005
B
HOH
2006
4
HOH
HOH
2006
B
HOH
2007
4
HOH
HOH
2007
B
HOH
2008
4
HOH
HOH
2008
B
HOH
2009
4
HOH
HOH
2009
B
HOH
2010
4
HOH
HOH
2010
B
HOH
2011
4
HOH
HOH
2011
B
HOH
2012
4
HOH
HOH
2012
B
HOH
2013
4
HOH
HOH
2013
B
HOH
2014
4
HOH
HOH
2014
B
HOH
2015
4
HOH
HOH
2015
B
HOH
2016
4
HOH
HOH
2016
B
HOH
2017
4
HOH
HOH
2017
B
HOH
2018
4
HOH
HOH
2018
B
HOH
2019
4
HOH
HOH
2019
B
HOH
2020
4
HOH
HOH
2020
B
HOH
2021
4
HOH
HOH
2021
B
HOH
2022
4
HOH
HOH
2022
B
HOH
2023
4
HOH
HOH
2023
B
HOH
2024
4
HOH
HOH
2024
B
HOH
2025
4
HOH
HOH
2025
B
HOH
2026
4
HOH
HOH
2026
B
HOH
2027
4
HOH
HOH
2027
B
HOH
2028
4
HOH
HOH
2028
B
HOH
2029
4
HOH
HOH
2029
B
HOH
2030
4
HOH
HOH
2030
B
HOH
2031
4
HOH
HOH
2031
B
HOH
2032
4
HOH
HOH
2032
B
HOH
2033
4
HOH
HOH
2033
B
HOH
2034
4
HOH
HOH
2034
B
HOH
2035
4
HOH
HOH
2035
B
HOH
2036
4
HOH
HOH
2036
B
HOH
2037
4
HOH
HOH
2037
B
HOH
2038
4
HOH
HOH
2038
B
HOH
2039
4
HOH
HOH
2039
B
HOH
2040
4
HOH
HOH
2040
B
HOH
2041
4
HOH
HOH
2041
B
HOH
2042
4
HOH
HOH
2042
B
HOH
2043
4
HOH
HOH
2043
B
HOH
2044
4
HOH
HOH
2044
B
HOH
2045
4
HOH
HOH
2045
B
HOH
2046
4
HOH
HOH
2046
B
HOH
2047
4
HOH
HOH
2047
B
HOH
2048
4
HOH
HOH
2048
B
HOH
2049
4
HOH
HOH
2049
B
HOH
2050
4
HOH
HOH
2050
B
HOH
2051
4
HOH
HOH
2051
B
HOH
2052
4
HOH
HOH
2052
B
HOH
2053
4
HOH
HOH
2053
B
HOH
2054
4
HOH
HOH
2054
B
HOH
2055
4
HOH
HOH
2055
B
HOH
2056
4
HOH
HOH
2056
B
HOH
2057
4
HOH
HOH
2057
B
HOH
2058
4
HOH
HOH
2058
B
HOH
2059
4
HOH
HOH
2059
B
HOH
2060
4
HOH
HOH
2060
B
HOH
2061
4
HOH
HOH
2061
B
HOH
2062
4
HOH
HOH
2062
B
HOH
2063
4
HOH
HOH
2063
B
HOH
2064
4
HOH
HOH
2064
B
HOH
2065
4
HOH
HOH
2065
B
HOH
2066
4
HOH
HOH
2066
B
HOH
2067
4
HOH
HOH
2067
B
HOH
2068
4
HOH
HOH
2068
B
HOH
2069
4
HOH
HOH
2069
B
HOH
2070
4
HOH
HOH
2070
B
HOH
2071
4
HOH
HOH
2071
B
HOH
2072
4
HOH
HOH
2072
B
HOH
2073
4
HOH
HOH
2073
B
HOH
2074
4
HOH
HOH
2074
B
HOH
2075
4
HOH
HOH
2075
B
HOH
2076
4
HOH
HOH
2076
B
HOH
2077
4
HOH
HOH
2077
B
HOH
2078
4
HOH
HOH
2078
B
HOH
2079
4
HOH
HOH
2079
B
HOH
2080
4
HOH
HOH
2080
B
HOH
2081
4
HOH
HOH
2081
B
HOH
2082
4
HOH
HOH
2082
B
HOH
2083
4
HOH
HOH
2083
B
HOH
2084
4
HOH
HOH
2084
B
HOH
2085
4
HOH
HOH
2085
B
HOH
2086
4
HOH
HOH
2086
B
HOH
2087
4
HOH
HOH
2087
B
HOH
2088
4
HOH
HOH
2088
B
HOH
2089
4
HOH
HOH
2089
B
HOH
2090
4
HOH
HOH
2090
B
HOH
2091
4
HOH
HOH
2091
B
HOH
2092
4
HOH
HOH
2092
B
HOH
2093
4
HOH
HOH
2093
B
HOH
2094
4
HOH
HOH
2094
B
HOH
2095
4
HOH
HOH
2095
B
HOH
2096
4
HOH
HOH
2096
B
HOH
2097
4
HOH
HOH
2097
B
HOH
2098
4
HOH
HOH
2098
B
HOH
2099
4
HOH
HOH
2099
B
HOH
2100
4
HOH
HOH
2100
B
HOH
2101
4
HOH
HOH
2101
B
HOH
2102
4
HOH
HOH
2102
B
HOH
2103
4
HOH
HOH
2103
B
HOH
2104
4
HOH
HOH
2104
B
HOH
2105
4
HOH
HOH
2105
B
HOH
2106
4
HOH
HOH
2106
B
HOH
2107
4
HOH
HOH
2107
B
HOH
2108
4
HOH
HOH
2108
B
HOH
2109
4
HOH
HOH
2109
B
n
1
89
A
n
2
90
A
n
3
91
A
SER
92
n
4
SER
92
A
PRO
93
n
5
PRO
93
A
VAL
94
n
6
VAL
94
A
SER
95
n
7
SER
95
A
ASP
96
n
8
ASP
96
A
THR
97
n
9
THR
97
A
ASP
98
n
10
ASP
98
A
ARG
99
n
11
ARG
99
A
LEU
100
n
12
LEU
100
A
LEU
101
n
13
LEU
101
A
TYR
102
n
14
TYR
102
A
SER
103
n
15
SER
103
A
THR
104
n
16
THR
104
A
ALA
105
n
17
ALA
105
A
MET
106
n
18
MET
106
A
PRO
107
n
19
PRO
107
A
ALA
108
n
20
ALA
108
A
PHE
109
n
21
PHE
109
A
LEU
110
n
22
LEU
110
A
THR
111
n
23
THR
111
A
ALA
112
n
24
ALA
112
A
LYS
113
n
25
LYS
113
A
ARG
114
n
26
ARG
114
A
ASN
115
n
27
ASN
115
A
LYS
116
n
28
LYS
116
A
ASN
117
n
29
ASN
117
A
PRO
118
n
30
PRO
118
A
GLY
119
n
31
GLY
119
A
ASN
120
n
32
ASN
120
A
LEU
121
n
33
LEU
121
A
ASP
122
n
34
ASP
122
A
TRP
123
n
35
TRP
123
A
SER
124
n
36
SER
124
A
ASP
125
n
37
ASP
125
A
ASP
126
n
38
ASP
126
A
GLY
127
n
39
GLY
127
A
CYS
128
n
40
CYS
128
A
SER
129
n
41
SER
129
A
LYS
130
n
42
LYS
130
A
SER
131
n
43
SER
131
A
PRO
132
n
44
PRO
132
A
ASP
133
n
45
ASP
133
A
ARG
134
n
46
ARG
134
A
PRO
135
n
47
PRO
135
A
ALA
136
n
48
ALA
136
A
GLY
137
n
49
GLY
137
A
PHE
138
n
50
PHE
138
A
ASN
139
n
51
ASN
139
A
PHE
140
n
52
PHE
140
A
LEU
141
n
53
LEU
141
A
ASP
142
n
54
ASP
142
A
SER
143
n
55
SER
143
A
CYS
144
n
56
CYS
144
A
LYS
145
n
57
LYS
145
A
ARG
146
n
58
ARG
146
A
HIS
147
n
59
HIS
147
A
ASP
148
n
60
ASP
148
A
PHE
149
n
61
PHE
149
A
GLY
150
n
62
GLY
150
A
TYR
151
n
63
TYR
151
A
ARG
152
n
64
ARG
152
A
ASN
153
n
65
ASN
153
A
TYR
154
n
66
TYR
154
A
LYS
155
n
67
LYS
155
A
LYS
156
n
68
LYS
156
A
GLN
157
n
69
GLN
157
A
HIS
158
n
70
HIS
158
A
ARG
159
n
71
ARG
159
A
PHE
160
n
72
PHE
160
A
THR
161
n
73
THR
161
A
GLU
162
n
74
GLU
162
A
ALA
163
n
75
ALA
163
A
ASN
164
n
76
ASN
164
A
ARG
165
n
77
ARG
165
A
LYS
166
n
78
LYS
166
A
ARG
167
n
79
ARG
167
A
ILE
168
n
80
ILE
168
A
ASP
169
n
81
ASP
169
A
ASP
170
n
82
ASP
170
A
ASN
171
n
83
ASN
171
A
PHE
172
n
84
PHE
172
A
LYS
173
n
85
LYS
173
A
LYS
174
n
86
LYS
174
A
ASP
175
n
87
ASP
175
A
LEU
176
n
88
LEU
176
A
TYR
177
n
89
TYR
177
A
ASN
178
n
90
ASN
178
A
GLU
179
n
91
GLU
179
A
CYS
180
n
92
CYS
180
A
ALA
181
n
93
ALA
181
A
LYS
182
n
94
LYS
182
A
TYR
183
n
95
TYR
183
A
SER
184
n
96
SER
184
A
GLY
185
n
97
GLY
185
A
LEU
186
n
98
LEU
186
A
GLU
187
n
99
GLU
187
A
SER
188
n
100
SER
188
A
TRP
189
n
101
TRP
189
A
LYS
190
n
102
LYS
190
A
GLY
191
n
103
GLY
191
A
VAL
192
n
104
VAL
192
A
ALA
193
n
105
ALA
193
A
CYS
194
n
106
CYS
194
A
ARG
195
n
107
ARG
195
A
LYS
196
n
108
LYS
196
A
ILE
197
n
109
ILE
197
A
ALA
198
n
110
ALA
198
A
ASN
199
n
111
ASN
199
A
THR
200
n
112
THR
200
A
TYR
201
n
113
TYR
201
A
TYR
202
n
114
TYR
202
A
ASP
203
n
115
ASP
203
A
ALA
204
n
116
ALA
204
A
VAL
205
n
117
VAL
205
A
ARG
206
n
118
ARG
206
A
THR
207
n
119
THR
207
A
PHE
208
n
120
PHE
208
A
GLY
209
n
121
GLY
209
A
TRP
210
n
122
TRP
210
A
LEU
211
n
123
LEU
211
A
ALA
89
n
1
ALA
89
B
ALA
90
n
2
ALA
90
B
LEU
91
n
3
LEU
91
B
SER
92
n
4
SER
92
B
PRO
93
n
5
PRO
93
B
VAL
94
n
6
VAL
94
B
SER
95
n
7
SER
95
B
ASP
96
n
8
ASP
96
B
THR
97
n
9
THR
97
B
ASP
98
n
10
ASP
98
B
ARG
99
n
11
ARG
99
B
LEU
100
n
12
LEU
100
B
LEU
101
n
13
LEU
101
B
TYR
102
n
14
TYR
102
B
SER
103
n
15
SER
103
B
THR
104
n
16
THR
104
B
ALA
105
n
17
ALA
105
B
MET
106
n
18
MET
106
B
PRO
107
n
19
PRO
107
B
ALA
108
n
20
ALA
108
B
PHE
109
n
21
PHE
109
B
LEU
110
n
22
LEU
110
B
THR
111
n
23
THR
111
B
ALA
112
n
24
ALA
112
B
LYS
113
n
25
LYS
113
B
ARG
114
n
26
ARG
114
B
ASN
115
n
27
ASN
115
B
LYS
116
n
28
LYS
116
B
ASN
117
n
29
ASN
117
B
PRO
118
n
30
PRO
118
B
GLY
119
n
31
GLY
119
B
ASN
120
n
32
ASN
120
B
LEU
121
n
33
LEU
121
B
ASP
122
n
34
ASP
122
B
TRP
123
n
35
TRP
123
B
SER
124
n
36
SER
124
B
ASP
125
n
37
ASP
125
B
ASP
126
n
38
ASP
126
B
GLY
127
n
39
GLY
127
B
CYS
128
n
40
CYS
128
B
SER
129
n
41
SER
129
B
LYS
130
n
42
LYS
130
B
SER
131
n
43
SER
131
B
PRO
132
n
44
PRO
132
B
ASP
133
n
45
ASP
133
B
ARG
134
n
46
ARG
134
B
PRO
135
n
47
PRO
135
B
ALA
136
n
48
ALA
136
B
GLY
137
n
49
GLY
137
B
PHE
138
n
50
PHE
138
B
ASN
139
n
51
ASN
139
B
PHE
140
n
52
PHE
140
B
LEU
141
n
53
LEU
141
B
ASP
142
n
54
ASP
142
B
SER
143
n
55
SER
143
B
CYS
144
n
56
CYS
144
B
LYS
145
n
57
LYS
145
B
ARG
146
n
58
ARG
146
B
HIS
147
n
59
HIS
147
B
ASP
148
n
60
ASP
148
B
PHE
149
n
61
PHE
149
B
GLY
150
n
62
GLY
150
B
TYR
151
n
63
TYR
151
B
ARG
152
n
64
ARG
152
B
ASN
153
n
65
ASN
153
B
TYR
154
n
66
TYR
154
B
LYS
155
n
67
LYS
155
B
LYS
156
n
68
LYS
156
B
GLN
157
n
69
GLN
157
B
HIS
158
n
70
HIS
158
B
ARG
159
n
71
ARG
159
B
PHE
160
n
72
PHE
160
B
THR
161
n
73
THR
161
B
GLU
162
n
74
GLU
162
B
ALA
163
n
75
ALA
163
B
ASN
164
n
76
ASN
164
B
ARG
165
n
77
ARG
165
B
LYS
166
n
78
LYS
166
B
ARG
167
n
79
ARG
167
B
ILE
168
n
80
ILE
168
B
ASP
169
n
81
ASP
169
B
ASP
170
n
82
ASP
170
B
ASN
171
n
83
ASN
171
B
PHE
172
n
84
PHE
172
B
LYS
173
n
85
LYS
173
B
LYS
174
n
86
LYS
174
B
ASP
175
n
87
ASP
175
B
LEU
176
n
88
LEU
176
B
TYR
177
n
89
TYR
177
B
ASN
178
n
90
ASN
178
B
GLU
179
n
91
GLU
179
B
CYS
180
n
92
CYS
180
B
ALA
181
n
93
ALA
181
B
LYS
182
n
94
LYS
182
B
TYR
183
n
95
TYR
183
B
SER
184
n
96
SER
184
B
GLY
185
n
97
GLY
185
B
LEU
186
n
98
LEU
186
B
GLU
187
n
99
GLU
187
B
SER
188
n
100
SER
188
B
TRP
189
n
101
TRP
189
B
LYS
190
n
102
LYS
190
B
GLY
191
n
103
GLY
191
B
VAL
192
n
104
VAL
192
B
ALA
193
n
105
ALA
193
B
CYS
194
n
106
CYS
194
B
ARG
195
n
107
ARG
195
B
LYS
196
n
108
LYS
196
B
ILE
197
n
109
ILE
197
B
ALA
198
n
110
ALA
198
B
ASN
199
n
111
ASN
199
B
THR
200
n
112
THR
200
B
TYR
201
n
113
TYR
201
B
TYR
202
n
114
TYR
202
B
ASP
203
n
115
ASP
203
B
ALA
204
n
116
ALA
204
B
VAL
205
n
117
VAL
205
B
ARG
206
n
118
ARG
206
B
THR
207
n
119
THR
207
B
PHE
208
n
120
PHE
208
B
GLY
209
n
121
GLY
209
B
TRP
210
n
122
TRP
210
B
LEU
211
n
123
LEU
211
B
0.4260
0.3164
-1.1821
0.4040
-1.2989
4.3300
0.1153
-0.1272
-0.0216
-0.0046
-0.0876
0.0241
-0.0863
0.3513
-0.0277
0.0846
-0.0244
-0.0041
0.0637
0.0158
0.0494
refined
11.1868
39.3433
11.2937
X-RAY DIFFRACTION
0.0908
0.0611
-0.3958
1.1645
-0.5683
1.8144
0.0231
-0.0142
-0.0002
0.0826
0.0116
0.0610
-0.1175
0.0653
-0.0346
0.0154
-0.0062
0.0136
0.0555
-0.0002
0.0626
refined
-2.0551
34.8490
39.4503
X-RAY DIFFRACTION
A
94
A
211
X-RAY DIFFRACTION
1
B
94
B
211
X-RAY DIFFRACTION
2
author_and_software_defined_assembly
PISA
1
monomeric
author_and_software_defined_assembly
PISA
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
ALA
89
A
ALA
1
1
Y
1
A
ALA
90
A
ALA
2
1
Y
1
A
LEU
91
A
LEU
3
1
Y
1
A
A
OD2
O
ASP
HOH
142
2045
2.06
1
B
B
O
O
HOH
HOH
2078
2080
2.07
1
A
A
SER
LYS
129
130
-149.36
1
-20.61
2.70
111.00
90.39
A
A
A
N
CA
C
SER
SER
SER
131
131
131
N
1
12.42
2.00
110.40
122.82
A
A
A
CB
CA
C
TRP
TRP
TRP
189
189
189
N
1
-4.02
0.50
120.30
116.28
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
195
195
195
N
1
7.05
0.90
118.30
125.35
B
B
B
CB
CG
OD1
ASP
ASP
ASP
96
96
96
N
1
3.07
0.50
120.30
123.37
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
206
206
206
N
1
-4.73
0.50
120.30
115.57
B
B
B
NE
CZ
NH2
ARG
ARG
ARG
206
206
206
N
1
B
B
CG
CD2
HIS
HIS
158
158
0.055
0.009
1.354
1.409
N
1
A
A
CB
O
SER
HOH
188
2037
2.08
1_555
4_465
1
A
SER
129
-60.45
77.85
1
A
LYS
130
30.53
91.03
1
A
LEU
186
46.09
173.32
1
A
GLU
187
17.38
57.86
1
A
TRP
189
92.23
-101.25
1
B
CYS
128
-82.46
30.89
1
B
SER
129
40.29
-84.63
29.408
2.28
0.00
0.00
-0.03
0.00
-2.25
0.946
0.908
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.
0.27348
0.20961
0.21279
1.90
19.41
1112
20711
5.1
98.33
8.929
0.136
RANDOM
1
THROUGHOUT
SIRAS
0.175
0.173
0.80
0.80
1.20
NONE
MAXIMUM LIKELIHOOD
MASK
1.90
19.41
203
2198
11
0
1984
0.018
0.020
2048
1.907
1.939
2758
5.689
5.000
241
33.063
22.778
108
17.508
15.000
344
22.680
15.000
20
0.150
0.200
268
0.009
0.021
1614
0.367
0.331
1.949
61
1308
20
94.22
1.90
50.00
4AUP
22164
2.0
0.09
1
6.90
2.9
93.6
0.59
1.90
1.93
1.85
1
2.3
92.5
data reduction
DENZO
data scaling
SCALEPACK
phasing
SHELXD
phasing
SHARP
refinement
REFMAC
5.6.0117
PHOSPHOLIPASE A2 GROUP XIII
Tuber borchii Phospholipase A2
1
N
N
1
N
N
2
N
N
3
N
N
2
N
N
4
N
N
4
N
N
A
SER
92
A
SER
4
HELX_P
A
SER
103
A
SER
15
1
1
12
A
ALA
105
A
ALA
17
HELX_P
A
ASN
115
A
ASN
27
1
2
11
A
ARG
134
A
ARG
46
HELX_P
A
PHE
138
A
PHE
50
5
3
5
A
PHE
140
A
PHE
52
HELX_P
A
GLN
157
A
GLN
69
1
4
18
A
THR
161
A
THR
73
HELX_P
A
ALA
181
A
ALA
93
1
5
21
A
TRP
189
A
TRP
101
HELX_P
A
GLY
209
A
GLY
121
1
6
21
B
SER
92
B
SER
4
HELX_P
B
SER
103
B
SER
15
1
7
12
B
ALA
105
B
ALA
17
HELX_P
B
LYS
116
B
LYS
28
1
8
12
B
ARG
134
B
ARG
46
HELX_P
B
PHE
138
B
PHE
50
5
9
5
B
PHE
140
B
PHE
52
HELX_P
B
GLN
157
B
GLN
69
1
10
18
B
THR
161
B
THR
73
HELX_P
B
ALA
181
B
ALA
93
1
11
21
B
SER
184
B
SER
96
HELX_P
B
LEU
186
B
LEU
98
5
12
3
B
GLU
187
B
GLU
99
HELX_P
B
GLY
209
B
GLY
121
1
13
23
disulf
2.073
A
CYS
128
A
SG
CYS
40
1_555
A
CYS
144
A
SG
CYS
56
1_555
disulf
2.009
A
CYS
180
A
SG
CYS
92
1_555
A
CYS
194
A
SG
CYS
106
1_555
disulf
2.046
B
CYS
128
B
SG
CYS
40
1_555
B
CYS
144
B
SG
CYS
56
1_555
disulf
2.052
B
CYS
180
B
SG
CYS
92
1_555
B
CYS
194
B
SG
CYS
106
1_555
HYDROLASE
HYDROLASE
A
ASN
117
A
ASN
29
1
A
PRO
118
A
PRO
30
8.34
A
SER
184
A
SER
96
1
A
GLY
185
A
GLY
97
-8.16
A
GLY
185
A
GLY
97
1
A
LEU
186
A
LEU
98
8.34
A
SER
188
A
SER
100
1
A
TRP
189
A
TRP
101
23.95
B
ASN
117
B
ASN
29
1
B
PRO
118
B
PRO
30
4.92
Q9P4F6_TUBBO
UNP
1
Q9P4F6
89
211
4AUP
89
211
Q9P4F6
A
1
1
123
89
211
4AUP
89
211
Q9P4F6
B
1
1
123
BINDING SITE FOR RESIDUE ACT A 1212
Software
6
BINDING SITE FOR RESIDUE SCN B 1212
Software
4
BINDING SITE FOR RESIDUE ACT B 1213
Software
4
A
THR
111
A
THR
23
6
1_555
A
ALA
112
A
ALA
24
6
1_555
A
ASN
115
A
ASN
27
6
1_555
A
ASN
117
A
ASN
29
6
1_555
A
HOH
2019
F
HOH
6
1_555
B
ALA
105
B
ALA
17
6
1_555
A
ALA
105
A
ALA
17
4
1_555
B
ALA
112
B
ALA
24
4
1_555
B
ASN
117
B
ASN
29
4
1_555
B
LEU
186
B
LEU
98
4
3_545
B
SER
92
B
SER
4
4
1_555
B
PRO
93
B
PRO
5
4
1_555
B
VAL
94
B
VAL
6
4
1_555
B
SER
95
B
SER
7
4
1_555
19
P 21 21 21