0.023832
0.000000
0.000000
0.000000
0.017047
0.000000
0.000000
0.000000
0.010370
0.00000
0.00000
0.00000
Parsiegla, G.
Noguere, C.
Santell, L.
Lazarus, R.A.
Bourne, Y.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
41.960
58.660
96.430
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C8 H19 N O5
209.240
2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
BIS-TRIS BUFFER
non-polymer
Ca 2
40.078
CALCIUM ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Mg 2
24.305
MAGNESIUM ION
non-polymer
C8 H15 N O6
221.208
2-acetamido-2-deoxy-beta-D-glucopyranose
N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE
D-saccharide, beta linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
O4 P -3
94.971
PHOSPHATE ION
non-polymer
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
C
N
75
N
O
N
76
N
C
N
77
N
C
N
78
N
O
N
79
N
C
N
80
N
O
N
81
N
N
N
82
N
C
N
83
N
C
N
84
N
O
N
85
N
C
N
86
N
C
N
87
N
O
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
CA
N
108
N
N
N
109
R
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
S
N
114
N
O
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
N
N
123
S
C
N
124
N
C
N
125
N
O
N
126
N
C
N
127
N
C
N
128
N
C
N
129
N
O
N
130
N
N
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
N
N
143
S
C
N
144
N
C
N
145
N
O
N
146
N
C
N
147
N
C
N
148
N
C
N
149
N
O
N
150
N
O
N
151
N
O
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
N
N
162
N
C
N
163
N
C
N
164
N
O
N
165
N
O
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
N
N
172
S
C
N
173
N
C
N
174
N
O
N
175
N
C
Y
176
N
C
Y
177
N
N
Y
178
N
C
Y
179
N
C
Y
180
N
N
N
181
N
O
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
O
N
193
N
H
N
194
N
H
N
195
N
N
N
196
S
C
N
197
N
C
N
198
N
O
N
199
S
C
N
200
N
C
N
201
N
C
N
202
N
C
N
203
N
O
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
N
N
218
S
C
N
219
N
C
N
220
N
O
N
221
N
C
N
222
N
C
N
223
N
C
N
224
N
C
N
225
N
O
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
N
N
240
S
C
N
241
N
C
N
242
N
O
N
243
N
C
N
244
N
C
N
245
N
C
N
246
N
C
N
247
N
N
N
248
N
O
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
N
N
265
S
C
N
266
N
C
N
267
N
O
N
268
N
C
N
269
N
C
N
270
N
S
N
271
N
C
N
272
N
O
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
MG
N
285
R
C
N
286
R
C
N
287
R
C
N
288
S
C
N
289
R
C
N
290
N
C
N
291
N
C
N
292
N
C
N
293
N
N
N
294
N
O
N
295
N
O
N
296
N
O
N
297
N
O
N
298
N
O
N
299
N
O
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
N
N
316
S
C
N
317
N
C
N
318
N
O
N
319
N
C
Y
320
N
C
Y
321
N
C
Y
322
N
C
Y
323
N
C
Y
324
N
C
Y
325
N
C
N
326
N
O
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
P
N
339
N
O
N
340
N
O
N
341
N
O
N
342
N
O
N
343
N
N
N
344
S
C
N
345
N
C
N
346
N
O
N
347
N
C
N
348
N
C
N
349
N
C
N
350
N
O
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
N
N
361
S
C
N
362
N
C
N
363
N
O
N
364
N
C
N
365
N
O
N
366
N
O
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
N
N
375
S
C
N
376
N
C
N
377
N
O
N
378
R
C
N
379
N
O
N
380
N
C
N
381
N
O
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
N
N
392
S
C
N
393
N
C
N
394
N
O
N
395
N
C
Y
396
N
C
Y
397
N
C
Y
398
N
C
Y
399
N
N
Y
400
N
C
Y
401
N
C
Y
402
N
C
Y
403
N
C
Y
404
N
C
N
405
N
O
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
N
N
419
S
C
N
420
N
C
N
421
N
O
N
422
N
C
Y
423
N
C
Y
424
N
C
Y
425
N
C
Y
426
N
C
Y
427
N
C
Y
428
N
C
N
429
N
O
N
430
N
O
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
N
N
443
S
C
N
444
N
C
N
445
N
O
N
446
N
C
N
447
N
C
N
448
N
C
N
449
N
O
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
doub
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
doub
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
doub
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
doub
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
doub
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
Y
172
N
sing
Y
173
N
doub
Y
174
N
doub
N
175
N
sing
Y
176
N
sing
N
177
N
sing
Y
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
doub
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
doub
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
doub
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
doub
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
doub
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
doub
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
Y
310
N
doub
Y
311
N
sing
Y
312
N
sing
N
313
N
sing
Y
314
N
doub
N
315
N
sing
Y
316
N
doub
N
317
N
sing
Y
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
doub
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
doub
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
doub
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
doub
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
doub
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
Y
383
N
doub
Y
384
N
sing
Y
385
N
sing
N
386
N
sing
Y
387
N
doub
Y
388
N
sing
Y
389
N
sing
N
390
N
sing
Y
391
N
sing
Y
392
N
doub
N
393
N
sing
Y
394
N
doub
N
395
N
sing
Y
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
doub
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
Y
411
N
doub
Y
412
N
sing
Y
413
N
sing
N
414
N
sing
Y
415
N
doub
N
416
N
sing
Y
417
N
doub
N
418
N
sing
Y
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
doub
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
US
Biochemistry
BICHAW
0033
0006-2960
51
10250
10.1021/BI300873F
23215638
The Structure of Human DNase I Bound to Magnesium and Phosphate Ions Points to a Catalytic Mechanism Common to Members of the DNase I-Like Superfamily.
2012
10.2210/pdb4awn/pdb
pdb_00004awn
NAG A 1263 HAS WRONG CHIRALITY AT ATOM C1
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
120
1
CCD
2008-04-25
ADSC QUANTUM 315
SINGLE WAVELENGTH
M
x-ray
1
0.98
1.0
ID23-1
ESRF
0.98
SYNCHROTRON
ESRF BEAMLINE ID23-1
29277.879
DEOXYRIBONUCLEASE-1
3.1.21.1
1
man
polymer
424.401
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
1
man
branched
40.078
CALCIUM ION
2
syn
non-polymer
24.305
MAGNESIUM ION
1
syn
non-polymer
94.971
PHOSPHATE ION
1
syn
non-polymer
209.240
2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
1
syn
non-polymer
221.208
2-acetamido-2-deoxy-beta-D-glucopyranose
1
man
non-polymer
18.015
water
208
nat
water
DEOXYRIBONUCLEASE I, DNASE I, DORNASE ALFA
no
no
LKIAAFNIQTFGETKMSNATLVSYIVQILSRYDIALVQEVRDSHLTAVGKLLDNLNQDAPDTYHYVVSEPLGRNSYKERY
LFVYRPDQVSAVDSYYYDDGCEPCGNDTFNREPAIVRFFSRFTEVREFAIVPLHAAPGDAVAEIDALYDVYLDVQEKWGL
EDVMLMGDFNAGCSYVRPSQWSSIRLWTSPTFQWLIPDSADTTATPTHCAYDRIVVAGMLLRGAVVPDSALPFNFQAAYG
LSDQLAQAISDHYPVEVMLK
LKIAAFNIQTFGETKMSNATLVSYIVQILSRYDIALVQEVRDSHLTAVGKLLDNLNQDAPDTYHYVVSEPLGRNSYKERY
LFVYRPDQVSAVDSYYYDDGCEPCGNDTFNREPAIVRFFSRFTEVREFAIVPLHAAPGDAVAEIDALYDVYLDVQEKWGL
EDVMLMGDFNAGCSYVRPSQWSSIRLWTSPTFQWLIPDSADTTATPTHCAYDRIVVAGMLLRGAVVPDSALPFNFQAAYG
LSDQLAQAISDHYPVEVMLK
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
HUMAN
CHINESE HAMSTER
sample
9606
HOMO SAPIENS
CHO
10029
CRICETULUS GRISEUS
1
2.03
39.5
NONE
VAPOR DIFFUSION, HANGING DROP
HANGING DROP VAPOR DIFFUSION, 0.2 M MGCL2, 0.1 M BIS-TRIS AT PH 5.5, 25% V/V PEG 3350
database_PDB_rev
database_PDB_rev_record
exptl_crystal_grow
pdbx_database_proc
pdbx_database_status
struct_conn
atom_site
chem_comp
entity
pdbx_branch_scheme
pdbx_chem_comp_identifier
pdbx_database_status
pdbx_entity_branch
pdbx_entity_branch_descriptor
pdbx_entity_branch_link
pdbx_entity_branch_list
pdbx_entity_nonpoly
pdbx_nonpoly_scheme
pdbx_struct_assembly_gen
pdbx_struct_conn_angle
struct_asym
struct_conn
struct_site
struct_site_gen
chem_comp
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
repository
Initial release
Carbohydrate remediation
repository
Remediation
Database references
Data collection
Derived calculations
Experimental preparation
Other
Atomic model
Data collection
Derived calculations
Other
Structure summary
Data collection
Database references
Refinement description
Structure summary
1
0
2013-01-09
1
1
2013-01-23
1
2
2019-05-08
2
0
2020-07-29
2
1
2023-12-20
_exptl_crystal_grow.method
_pdbx_database_status.recvd_author_approval
_struct_conn.pdbx_leaving_atom_flag
_atom_site.B_iso_or_equiv
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.label_asym_id
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_entity_id
_atom_site.type_symbol
_chem_comp.name
_chem_comp.type
_pdbx_database_status.status_code_sf
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_comp_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_atom_id
_pdbx_struct_conn_angle.ptnr2_label_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.conn_type_id
_struct_conn.id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_role
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_chem_comp.pdbx_synonyms
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
A
NAG
1261
n
B
NAG
1
A
NAG
1262
n
B
NAG
2
DGlcpNAcb
N-acetyl-b-D-glucopyranosamine
b-D-GlcpNAc
GlcNAc
PDBE
Y
PDBE
2012-06-04
REL
REL
oligosaccharide
DGlcpNAcb1-4DGlcpNAcb1-
2
GMML
1.0
Glycam Condensed Sequence
WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1
2
PDB2Glycan
1.1.0
WURCS
[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}}
2
PDB-CARE
LINUCS
C1
O4
NAG
NAG
2
1
2
O1
HO4
sing
n
n
CA
CALCIUM ION
MG
MAGNESIUM ION
PO4
PHOSPHATE ION
BTB
2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
NAG
2-acetamido-2-deoxy-beta-D-glucopyranose
HOH
water
3DNI
PDB ENTRY 3DNI
PDB
experimental model
CA
300
3
CA
CA
300
A
CA
301
3
CA
CA
301
A
MG
302
4
MG
MG
302
A
PO4
310
5
PO4
PO4
310
A
BTB
315
6
BTB
BTB
315
A
NAG
1263
7
NAG
NAG
1263
A
HOH
2001
8
HOH
HOH
2001
A
HOH
2002
8
HOH
HOH
2002
A
HOH
2003
8
HOH
HOH
2003
A
HOH
2004
8
HOH
HOH
2004
A
HOH
2005
8
HOH
HOH
2005
A
HOH
2006
8
HOH
HOH
2006
A
HOH
2007
8
HOH
HOH
2007
A
HOH
2008
8
HOH
HOH
2008
A
HOH
2009
8
HOH
HOH
2009
A
HOH
2010
8
HOH
HOH
2010
A
HOH
2011
8
HOH
HOH
2011
A
HOH
2012
8
HOH
HOH
2012
A
HOH
2013
8
HOH
HOH
2013
A
HOH
2014
8
HOH
HOH
2014
A
HOH
2015
8
HOH
HOH
2015
A
HOH
2016
8
HOH
HOH
2016
A
HOH
2017
8
HOH
HOH
2017
A
HOH
2018
8
HOH
HOH
2018
A
HOH
2019
8
HOH
HOH
2019
A
HOH
2020
8
HOH
HOH
2020
A
HOH
2021
8
HOH
HOH
2021
A
HOH
2022
8
HOH
HOH
2022
A
HOH
2023
8
HOH
HOH
2023
A
HOH
2024
8
HOH
HOH
2024
A
HOH
2025
8
HOH
HOH
2025
A
HOH
2026
8
HOH
HOH
2026
A
HOH
2027
8
HOH
HOH
2027
A
HOH
2028
8
HOH
HOH
2028
A
HOH
2029
8
HOH
HOH
2029
A
HOH
2030
8
HOH
HOH
2030
A
HOH
2031
8
HOH
HOH
2031
A
HOH
2032
8
HOH
HOH
2032
A
HOH
2033
8
HOH
HOH
2033
A
HOH
2034
8
HOH
HOH
2034
A
HOH
2035
8
HOH
HOH
2035
A
HOH
2036
8
HOH
HOH
2036
A
HOH
2037
8
HOH
HOH
2037
A
HOH
2038
8
HOH
HOH
2038
A
HOH
2039
8
HOH
HOH
2039
A
HOH
2040
8
HOH
HOH
2040
A
HOH
2041
8
HOH
HOH
2041
A
HOH
2042
8
HOH
HOH
2042
A
HOH
2043
8
HOH
HOH
2043
A
HOH
2044
8
HOH
HOH
2044
A
HOH
2045
8
HOH
HOH
2045
A
HOH
2046
8
HOH
HOH
2046
A
HOH
2047
8
HOH
HOH
2047
A
HOH
2048
8
HOH
HOH
2048
A
HOH
2049
8
HOH
HOH
2049
A
HOH
2050
8
HOH
HOH
2050
A
HOH
2051
8
HOH
HOH
2051
A
HOH
2052
8
HOH
HOH
2052
A
HOH
2053
8
HOH
HOH
2053
A
HOH
2054
8
HOH
HOH
2054
A
HOH
2055
8
HOH
HOH
2055
A
HOH
2056
8
HOH
HOH
2056
A
HOH
2057
8
HOH
HOH
2057
A
HOH
2058
8
HOH
HOH
2058
A
HOH
2059
8
HOH
HOH
2059
A
HOH
2060
8
HOH
HOH
2060
A
HOH
2061
8
HOH
HOH
2061
A
HOH
2062
8
HOH
HOH
2062
A
HOH
2063
8
HOH
HOH
2063
A
HOH
2064
8
HOH
HOH
2064
A
HOH
2065
8
HOH
HOH
2065
A
HOH
2066
8
HOH
HOH
2066
A
HOH
2067
8
HOH
HOH
2067
A
HOH
2068
8
HOH
HOH
2068
A
HOH
2069
8
HOH
HOH
2069
A
HOH
2070
8
HOH
HOH
2070
A
HOH
2071
8
HOH
HOH
2071
A
HOH
2072
8
HOH
HOH
2072
A
HOH
2073
8
HOH
HOH
2073
A
HOH
2074
8
HOH
HOH
2074
A
HOH
2075
8
HOH
HOH
2075
A
HOH
2076
8
HOH
HOH
2076
A
HOH
2077
8
HOH
HOH
2077
A
HOH
2078
8
HOH
HOH
2078
A
HOH
2079
8
HOH
HOH
2079
A
HOH
2080
8
HOH
HOH
2080
A
HOH
2081
8
HOH
HOH
2081
A
HOH
2082
8
HOH
HOH
2082
A
HOH
2083
8
HOH
HOH
2083
A
HOH
2084
8
HOH
HOH
2084
A
HOH
2085
8
HOH
HOH
2085
A
HOH
2086
8
HOH
HOH
2086
A
HOH
2087
8
HOH
HOH
2087
A
HOH
2088
8
HOH
HOH
2088
A
HOH
2089
8
HOH
HOH
2089
A
HOH
2090
8
HOH
HOH
2090
A
HOH
2091
8
HOH
HOH
2091
A
HOH
2092
8
HOH
HOH
2092
A
HOH
2093
8
HOH
HOH
2093
A
HOH
2094
8
HOH
HOH
2094
A
HOH
2095
8
HOH
HOH
2095
A
HOH
2096
8
HOH
HOH
2096
A
HOH
2097
8
HOH
HOH
2097
A
HOH
2098
8
HOH
HOH
2098
A
HOH
2099
8
HOH
HOH
2099
A
HOH
2100
8
HOH
HOH
2100
A
HOH
2101
8
HOH
HOH
2101
A
HOH
2102
8
HOH
HOH
2102
A
HOH
2103
8
HOH
HOH
2103
A
HOH
2104
8
HOH
HOH
2104
A
HOH
2105
8
HOH
HOH
2105
A
HOH
2106
8
HOH
HOH
2106
A
HOH
2107
8
HOH
HOH
2107
A
HOH
2108
8
HOH
HOH
2108
A
HOH
2109
8
HOH
HOH
2109
A
HOH
2110
8
HOH
HOH
2110
A
HOH
2111
8
HOH
HOH
2111
A
HOH
2112
8
HOH
HOH
2112
A
HOH
2113
8
HOH
HOH
2113
A
HOH
2114
8
HOH
HOH
2114
A
HOH
2115
8
HOH
HOH
2115
A
HOH
2116
8
HOH
HOH
2116
A
HOH
2117
8
HOH
HOH
2117
A
HOH
2118
8
HOH
HOH
2118
A
HOH
2119
8
HOH
HOH
2119
A
HOH
2120
8
HOH
HOH
2120
A
HOH
2121
8
HOH
HOH
2121
A
HOH
2122
8
HOH
HOH
2122
A
HOH
2123
8
HOH
HOH
2123
A
HOH
2124
8
HOH
HOH
2124
A
HOH
2125
8
HOH
HOH
2125
A
HOH
2126
8
HOH
HOH
2126
A
HOH
2127
8
HOH
HOH
2127
A
HOH
2128
8
HOH
HOH
2128
A
HOH
2129
8
HOH
HOH
2129
A
HOH
2130
8
HOH
HOH
2130
A
HOH
2131
8
HOH
HOH
2131
A
HOH
2132
8
HOH
HOH
2132
A
HOH
2133
8
HOH
HOH
2133
A
HOH
2134
8
HOH
HOH
2134
A
HOH
2135
8
HOH
HOH
2135
A
HOH
2136
8
HOH
HOH
2136
A
HOH
2137
8
HOH
HOH
2137
A
HOH
2138
8
HOH
HOH
2138
A
HOH
2139
8
HOH
HOH
2139
A
HOH
2140
8
HOH
HOH
2140
A
HOH
2141
8
HOH
HOH
2141
A
HOH
2142
8
HOH
HOH
2142
A
HOH
2143
8
HOH
HOH
2143
A
HOH
2144
8
HOH
HOH
2144
A
HOH
2145
8
HOH
HOH
2145
A
HOH
2146
8
HOH
HOH
2146
A
HOH
2147
8
HOH
HOH
2147
A
HOH
2148
8
HOH
HOH
2148
A
HOH
2149
8
HOH
HOH
2149
A
HOH
2150
8
HOH
HOH
2150
A
HOH
2151
8
HOH
HOH
2151
A
HOH
2152
8
HOH
HOH
2152
A
HOH
2153
8
HOH
HOH
2153
A
HOH
2154
8
HOH
HOH
2154
A
HOH
2155
8
HOH
HOH
2155
A
HOH
2156
8
HOH
HOH
2156
A
HOH
2157
8
HOH
HOH
2157
A
HOH
2158
8
HOH
HOH
2158
A
HOH
2159
8
HOH
HOH
2159
A
HOH
2160
8
HOH
HOH
2160
A
HOH
2161
8
HOH
HOH
2161
A
HOH
2162
8
HOH
HOH
2162
A
HOH
2163
8
HOH
HOH
2163
A
HOH
2164
8
HOH
HOH
2164
A
HOH
2165
8
HOH
HOH
2165
A
HOH
2166
8
HOH
HOH
2166
A
HOH
2167
8
HOH
HOH
2167
A
HOH
2168
8
HOH
HOH
2168
A
HOH
2169
8
HOH
HOH
2169
A
HOH
2170
8
HOH
HOH
2170
A
HOH
2171
8
HOH
HOH
2171
A
HOH
2172
8
HOH
HOH
2172
A
HOH
2173
8
HOH
HOH
2173
A
HOH
2174
8
HOH
HOH
2174
A
HOH
2175
8
HOH
HOH
2175
A
HOH
2176
8
HOH
HOH
2176
A
HOH
2177
8
HOH
HOH
2177
A
HOH
2178
8
HOH
HOH
2178
A
HOH
2179
8
HOH
HOH
2179
A
HOH
2180
8
HOH
HOH
2180
A
HOH
2181
8
HOH
HOH
2181
A
HOH
2182
8
HOH
HOH
2182
A
HOH
2183
8
HOH
HOH
2183
A
HOH
2184
8
HOH
HOH
2184
A
HOH
2185
8
HOH
HOH
2185
A
HOH
2186
8
HOH
HOH
2186
A
HOH
2187
8
HOH
HOH
2187
A
HOH
2188
8
HOH
HOH
2188
A
HOH
2189
8
HOH
HOH
2189
A
HOH
2190
8
HOH
HOH
2190
A
HOH
2191
8
HOH
HOH
2191
A
HOH
2192
8
HOH
HOH
2192
A
HOH
2193
8
HOH
HOH
2193
A
HOH
2194
8
HOH
HOH
2194
A
HOH
2195
8
HOH
HOH
2195
A
HOH
2196
8
HOH
HOH
2196
A
HOH
2197
8
HOH
HOH
2197
A
HOH
2198
8
HOH
HOH
2198
A
HOH
2199
8
HOH
HOH
2199
A
HOH
2200
8
HOH
HOH
2200
A
HOH
2201
8
HOH
HOH
2201
A
HOH
2202
8
HOH
HOH
2202
A
HOH
2203
8
HOH
HOH
2203
A
HOH
2204
8
HOH
HOH
2204
A
HOH
2205
8
HOH
HOH
2205
A
HOH
2206
8
HOH
HOH
2206
A
HOH
2207
8
HOH
HOH
2207
A
HOH
2208
8
HOH
HOH
2208
A
LEU
1
n
1
LEU
1
A
LYS
2
n
2
LYS
2
A
ILE
3
n
3
ILE
3
A
ALA
4
n
4
ALA
4
A
ALA
5
n
5
ALA
5
A
PHE
6
n
6
PHE
6
A
ASN
7
n
7
ASN
7
A
ILE
8
n
8
ILE
8
A
GLN
9
n
9
GLN
9
A
THR
10
n
10
THR
10
A
PHE
11
n
11
PHE
11
A
GLY
12
n
12
GLY
12
A
GLU
13
n
13
GLU
13
A
THR
14
n
14
THR
14
A
LYS
15
n
15
LYS
15
A
MET
16
n
16
MET
16
A
SER
17
n
17
SER
17
A
ASN
18
n
18
ASN
18
A
ALA
19
n
19
ALA
19
A
THR
20
n
20
THR
20
A
LEU
21
n
21
LEU
21
A
VAL
22
n
22
VAL
22
A
SER
23
n
23
SER
23
A
TYR
24
n
24
TYR
24
A
ILE
25
n
25
ILE
25
A
VAL
26
n
26
VAL
26
A
GLN
27
n
27
GLN
27
A
ILE
28
n
28
ILE
28
A
LEU
29
n
29
LEU
29
A
SER
30
n
30
SER
30
A
ARG
31
n
31
ARG
31
A
TYR
32
n
32
TYR
32
A
ASP
33
n
33
ASP
33
A
ILE
34
n
34
ILE
34
A
ALA
35
n
35
ALA
35
A
LEU
36
n
36
LEU
36
A
VAL
37
n
37
VAL
37
A
GLN
38
n
38
GLN
38
A
GLU
39
n
39
GLU
39
A
VAL
40
n
40
VAL
40
A
ARG
41
n
41
ARG
41
A
ASP
42
n
42
ASP
42
A
SER
43
n
43
SER
43
A
HIS
44
n
44
HIS
44
A
LEU
45
n
45
LEU
45
A
THR
46
n
46
THR
46
A
ALA
47
n
47
ALA
47
A
VAL
48
n
48
VAL
48
A
GLY
49
n
49
GLY
49
A
LYS
50
n
50
LYS
50
A
LEU
51
n
51
LEU
51
A
LEU
52
n
52
LEU
52
A
ASP
53
n
53
ASP
53
A
ASN
54
n
54
ASN
54
A
LEU
55
n
55
LEU
55
A
ASN
56
n
56
ASN
56
A
GLN
57
n
57
GLN
57
A
ASP
58
n
58
ASP
58
A
ALA
59
n
59
ALA
59
A
PRO
60
n
60
PRO
60
A
ASP
61
n
61
ASP
61
A
THR
62
n
62
THR
62
A
TYR
63
n
63
TYR
63
A
HIS
64
n
64
HIS
64
A
TYR
65
n
65
TYR
65
A
VAL
66
n
66
VAL
66
A
VAL
67
n
67
VAL
67
A
SER
68
n
68
SER
68
A
GLU
69
n
69
GLU
69
A
PRO
70
n
70
PRO
70
A
LEU
71
n
71
LEU
71
A
GLY
72
n
72
GLY
72
A
ARG
73
n
73
ARG
73
A
ASN
74
n
74
ASN
74
A
SER
75
n
75
SER
75
A
TYR
76
n
76
TYR
76
A
LYS
77
n
77
LYS
77
A
GLU
78
n
78
GLU
78
A
ARG
79
n
79
ARG
79
A
TYR
80
n
80
TYR
80
A
LEU
81
n
81
LEU
81
A
PHE
82
n
82
PHE
82
A
VAL
83
n
83
VAL
83
A
TYR
84
n
84
TYR
84
A
ARG
85
n
85
ARG
85
A
PRO
86
n
86
PRO
86
A
ASP
87
n
87
ASP
87
A
GLN
88
n
88
GLN
88
A
VAL
89
n
89
VAL
89
A
SER
90
n
90
SER
90
A
ALA
91
n
91
ALA
91
A
VAL
92
n
92
VAL
92
A
ASP
93
n
93
ASP
93
A
SER
94
n
94
SER
94
A
TYR
95
n
95
TYR
95
A
TYR
96
n
96
TYR
96
A
TYR
97
n
97
TYR
97
A
ASP
98
n
98
ASP
98
A
ASP
99
n
99
ASP
99
A
GLY
100
n
100
GLY
100
A
CYS
101
n
101
CYS
101
A
GLU
102
n
102
GLU
102
A
PRO
103
n
103
PRO
103
A
CYS
104
n
104
CYS
104
A
GLY
105
n
105
GLY
105
A
ASN
106
n
106
ASN
106
A
ASP
107
n
107
ASP
107
A
THR
108
n
108
THR
108
A
PHE
109
n
109
PHE
109
A
ASN
110
n
110
ASN
110
A
ARG
111
n
111
ARG
111
A
GLU
112
n
112
GLU
112
A
PRO
113
n
113
PRO
113
A
ALA
114
n
114
ALA
114
A
ILE
115
n
115
ILE
115
A
VAL
116
n
116
VAL
116
A
ARG
117
n
117
ARG
117
A
PHE
118
n
118
PHE
118
A
PHE
119
n
119
PHE
119
A
SER
120
n
120
SER
120
A
ARG
121
n
121
ARG
121
A
PHE
122
n
122
PHE
122
A
THR
123
n
123
THR
123
A
GLU
124
n
124
GLU
124
A
VAL
125
n
125
VAL
125
A
ARG
126
n
126
ARG
126
A
GLU
127
n
127
GLU
127
A
PHE
128
n
128
PHE
128
A
ALA
129
n
129
ALA
129
A
ILE
130
n
130
ILE
130
A
VAL
131
n
131
VAL
131
A
PRO
132
n
132
PRO
132
A
LEU
133
n
133
LEU
133
A
HIS
134
n
134
HIS
134
A
ALA
135
n
135
ALA
135
A
ALA
136
n
136
ALA
136
A
PRO
137
n
137
PRO
137
A
GLY
138
n
138
GLY
138
A
ASP
139
n
139
ASP
139
A
ALA
140
n
140
ALA
140
A
VAL
141
n
141
VAL
141
A
ALA
142
n
142
ALA
142
A
GLU
143
n
143
GLU
143
A
ILE
144
n
144
ILE
144
A
ASP
145
n
145
ASP
145
A
ALA
146
n
146
ALA
146
A
LEU
147
n
147
LEU
147
A
TYR
148
n
148
TYR
148
A
ASP
149
n
149
ASP
149
A
VAL
150
n
150
VAL
150
A
TYR
151
n
151
TYR
151
A
LEU
152
n
152
LEU
152
A
ASP
153
n
153
ASP
153
A
VAL
154
n
154
VAL
154
A
GLN
155
n
155
GLN
155
A
GLU
156
n
156
GLU
156
A
LYS
157
n
157
LYS
157
A
TRP
158
n
158
TRP
158
A
GLY
159
n
159
GLY
159
A
LEU
160
n
160
LEU
160
A
GLU
161
n
161
GLU
161
A
ASP
162
n
162
ASP
162
A
VAL
163
n
163
VAL
163
A
MET
164
n
164
MET
164
A
LEU
165
n
165
LEU
165
A
MET
166
n
166
MET
166
A
GLY
167
n
167
GLY
167
A
ASP
168
n
168
ASP
168
A
PHE
169
n
169
PHE
169
A
ASN
170
n
170
ASN
170
A
ALA
171
n
171
ALA
171
A
GLY
172
n
172
GLY
172
A
CYS
173
n
173
CYS
173
A
SER
174
n
174
SER
174
A
TYR
175
n
175
TYR
175
A
VAL
176
n
176
VAL
176
A
ARG
177
n
177
ARG
177
A
PRO
178
n
178
PRO
178
A
SER
179
n
179
SER
179
A
GLN
180
n
180
GLN
180
A
TRP
181
n
181
TRP
181
A
SER
182
n
182
SER
182
A
SER
183
n
183
SER
183
A
ILE
184
n
184
ILE
184
A
ARG
185
n
185
ARG
185
A
LEU
186
n
186
LEU
186
A
TRP
187
n
187
TRP
187
A
THR
188
n
188
THR
188
A
SER
189
n
189
SER
189
A
PRO
190
n
190
PRO
190
A
THR
191
n
191
THR
191
A
PHE
192
n
192
PHE
192
A
GLN
193
n
193
GLN
193
A
TRP
194
n
194
TRP
194
A
LEU
195
n
195
LEU
195
A
ILE
196
n
196
ILE
196
A
PRO
197
n
197
PRO
197
A
ASP
198
n
198
ASP
198
A
SER
199
n
199
SER
199
A
ALA
200
n
200
ALA
200
A
ASP
201
n
201
ASP
201
A
THR
202
n
202
THR
202
A
THR
203
n
203
THR
203
A
ALA
204
n
204
ALA
204
A
THR
205
n
205
THR
205
A
PRO
206
n
206
PRO
206
A
THR
207
n
207
THR
207
A
HIS
208
n
208
HIS
208
A
CYS
209
n
209
CYS
209
A
ALA
210
n
210
ALA
210
A
TYR
211
n
211
TYR
211
A
ASP
212
n
212
ASP
212
A
ARG
213
n
213
ARG
213
A
ILE
214
n
214
ILE
214
A
VAL
215
n
215
VAL
215
A
VAL
216
n
216
VAL
216
A
ALA
217
n
217
ALA
217
A
GLY
218
n
218
GLY
218
A
MET
219
n
219
MET
219
A
LEU
220
n
220
LEU
220
A
LEU
221
n
221
LEU
221
A
ARG
222
n
222
ARG
222
A
GLY
223
n
223
GLY
223
A
ALA
224
n
224
ALA
224
A
VAL
225
n
225
VAL
225
A
VAL
226
n
226
VAL
226
A
PRO
227
n
227
PRO
227
A
ASP
228
n
228
ASP
228
A
SER
229
n
229
SER
229
A
ALA
230
n
230
ALA
230
A
LEU
231
n
231
LEU
231
A
PRO
232
n
232
PRO
232
A
PHE
233
n
233
PHE
233
A
ASN
234
n
234
ASN
234
A
PHE
235
n
235
PHE
235
A
GLN
236
n
236
GLN
236
A
ALA
237
n
237
ALA
237
A
ALA
238
n
238
ALA
238
A
TYR
239
n
239
TYR
239
A
GLY
240
n
240
GLY
240
A
LEU
241
n
241
LEU
241
A
SER
242
n
242
SER
242
A
ASP
243
n
243
ASP
243
A
GLN
244
n
244
GLN
244
A
LEU
245
n
245
LEU
245
A
ALA
246
n
246
ALA
246
A
GLN
247
n
247
GLN
247
A
ALA
248
n
248
ALA
248
A
ILE
249
n
249
ILE
249
A
SER
250
n
250
SER
250
A
ASP
251
n
251
ASP
251
A
HIS
252
n
252
HIS
252
A
TYR
253
n
253
TYR
253
A
PRO
254
n
254
PRO
254
A
VAL
255
n
255
VAL
255
A
GLU
256
n
256
GLU
256
A
VAL
257
n
257
VAL
257
A
MET
258
n
258
MET
258
A
LEU
259
n
259
LEU
259
A
LYS
260
n
260
LYS
260
A
author_and_software_defined_assembly
PISA
1
monomeric
A
GLU
39
A
OE2
GLU
39
1_555
A
MG
302
E
MG
MG
1_555
A
PO4
310
F
O2
PO4
1_555
93.3
A
GLU
39
A
OE2
GLU
39
1_555
A
MG
302
E
MG
MG
1_555
A
HOH
2005
I
O
HOH
1_555
78.9
A
PO4
310
F
O2
PO4
1_555
A
MG
302
E
MG
MG
1_555
A
HOH
2005
I
O
HOH
1_555
99.1
A
GLU
39
A
OE2
GLU
39
1_555
A
MG
302
E
MG
MG
1_555
A
HOH
2033
I
O
HOH
1_555
83.2
A
PO4
310
F
O2
PO4
1_555
A
MG
302
E
MG
MG
1_555
A
HOH
2033
I
O
HOH
1_555
174.0
A
HOH
2005
I
O
HOH
1_555
A
MG
302
E
MG
MG
1_555
A
HOH
2033
I
O
HOH
1_555
85.0
A
GLU
39
A
OE2
GLU
39
1_555
A
MG
302
E
MG
MG
1_555
A
HOH
2035
I
O
HOH
1_555
92.4
A
PO4
310
F
O2
PO4
1_555
A
MG
302
E
MG
MG
1_555
A
HOH
2035
I
O
HOH
1_555
93.9
A
HOH
2005
I
O
HOH
1_555
A
MG
302
E
MG
MG
1_555
A
HOH
2035
I
O
HOH
1_555
164.7
A
HOH
2033
I
O
HOH
1_555
A
MG
302
E
MG
MG
1_555
A
HOH
2035
I
O
HOH
1_555
81.5
A
GLU
39
A
OE2
GLU
39
1_555
A
MG
302
E
MG
MG
1_555
A
HOH
2202
I
O
HOH
1_555
170.7
A
PO4
310
F
O2
PO4
1_555
A
MG
302
E
MG
MG
1_555
A
HOH
2202
I
O
HOH
1_555
93.3
A
HOH
2005
I
O
HOH
1_555
A
MG
302
E
MG
MG
1_555
A
HOH
2202
I
O
HOH
1_555
93.6
A
HOH
2033
I
O
HOH
1_555
A
MG
302
E
MG
MG
1_555
A
HOH
2202
I
O
HOH
1_555
90.8
A
HOH
2035
I
O
HOH
1_555
A
MG
302
E
MG
MG
1_555
A
HOH
2202
I
O
HOH
1_555
93.7
A
ASP
99
A
OD2
ASP
99
1_555
A
CA
300
C
CA
CA
1_555
A
ASP
107
A
OD2
ASP
107
1_555
90.4
A
ASP
99
A
OD2
ASP
99
1_555
A
CA
300
C
CA
CA
1_555
A
PHE
109
A
O
PHE
109
1_555
87.1
A
ASP
107
A
OD2
ASP
107
1_555
A
CA
300
C
CA
CA
1_555
A
PHE
109
A
O
PHE
109
1_555
83.4
A
ASP
99
A
OD2
ASP
99
1_555
A
CA
300
C
CA
CA
1_555
A
GLU
112
A
OE1
GLU
112
1_555
85.1
A
ASP
107
A
OD2
ASP
107
1_555
A
CA
300
C
CA
CA
1_555
A
GLU
112
A
OE1
GLU
112
1_555
175.0
A
PHE
109
A
O
PHE
109
1_555
A
CA
300
C
CA
CA
1_555
A
GLU
112
A
OE1
GLU
112
1_555
94.3
A
ASP
99
A
OD2
ASP
99
1_555
A
CA
300
C
CA
CA
1_555
A
HOH
2100
I
O
HOH
1_555
91.9
A
ASP
107
A
OD2
ASP
107
1_555
A
CA
300
C
CA
CA
1_555
A
HOH
2100
I
O
HOH
1_555
91.2
A
PHE
109
A
O
PHE
109
1_555
A
CA
300
C
CA
CA
1_555
A
HOH
2100
I
O
HOH
1_555
174.5
A
GLU
112
A
OE1
GLU
112
1_555
A
CA
300
C
CA
CA
1_555
A
HOH
2100
I
O
HOH
1_555
91.0
A
ASP
99
A
OD2
ASP
99
1_555
A
CA
300
C
CA
CA
1_555
A
HOH
2101
I
O
HOH
1_555
172.9
A
ASP
107
A
OD2
ASP
107
1_555
A
CA
300
C
CA
CA
1_555
A
HOH
2101
I
O
HOH
1_555
93.7
A
PHE
109
A
O
PHE
109
1_555
A
CA
300
C
CA
CA
1_555
A
HOH
2101
I
O
HOH
1_555
87.5
A
GLU
112
A
OE1
GLU
112
1_555
A
CA
300
C
CA
CA
1_555
A
HOH
2101
I
O
HOH
1_555
90.6
A
HOH
2100
I
O
HOH
1_555
A
CA
300
C
CA
CA
1_555
A
HOH
2101
I
O
HOH
1_555
93.9
A
ASP
201
A
OD1
ASP
201
1_555
A
CA
301
D
CA
CA
1_555
A
ASP
201
A
OD2
ASP
201
1_555
51.0
A
ASP
201
A
OD1
ASP
201
1_555
A
CA
301
D
CA
CA
1_555
A
THR
203
A
OG1
THR
203
1_555
71.8
A
ASP
201
A
OD2
ASP
201
1_555
A
CA
301
D
CA
CA
1_555
A
THR
203
A
OG1
THR
203
1_555
122.4
A
ASP
201
A
OD1
ASP
201
1_555
A
CA
301
D
CA
CA
1_555
A
THR
203
A
O
THR
203
1_555
83.7
A
ASP
201
A
OD2
ASP
201
1_555
A
CA
301
D
CA
CA
1_555
A
THR
203
A
O
THR
203
1_555
95.6
A
THR
203
A
OG1
THR
203
1_555
A
CA
301
D
CA
CA
1_555
A
THR
203
A
O
THR
203
1_555
70.1
A
ASP
201
A
OD1
ASP
201
1_555
A
CA
301
D
CA
CA
1_555
A
THR
205
A
O
THR
205
1_555
151.7
A
ASP
201
A
OD2
ASP
201
1_555
A
CA
301
D
CA
CA
1_555
A
THR
205
A
O
THR
205
1_555
157.4
A
THR
203
A
OG1
THR
203
1_555
A
CA
301
D
CA
CA
1_555
A
THR
205
A
O
THR
205
1_555
80.1
A
THR
203
A
O
THR
203
1_555
A
CA
301
D
CA
CA
1_555
A
THR
205
A
O
THR
205
1_555
90.1
A
ASP
201
A
OD1
ASP
201
1_555
A
CA
301
D
CA
CA
1_555
A
THR
207
A
O
THR
207
1_555
78.8
A
ASP
201
A
OD2
ASP
201
1_555
A
CA
301
D
CA
CA
1_555
A
THR
207
A
O
THR
207
1_555
102.5
A
THR
203
A
OG1
THR
203
1_555
A
CA
301
D
CA
CA
1_555
A
THR
207
A
O
THR
207
1_555
67.7
A
THR
203
A
O
THR
203
1_555
A
CA
301
D
CA
CA
1_555
A
THR
207
A
O
THR
207
1_555
137.5
A
THR
205
A
O
THR
205
1_555
A
CA
301
D
CA
CA
1_555
A
THR
207
A
O
THR
207
1_555
87.6
A
ASP
201
A
OD1
ASP
201
1_555
A
CA
301
D
CA
CA
1_555
A
HOH
2169
I
O
HOH
1_555
122.3
A
ASP
201
A
OD2
ASP
201
1_555
A
CA
301
D
CA
CA
1_555
A
HOH
2169
I
O
HOH
1_555
78.8
A
THR
203
A
OG1
THR
203
1_555
A
CA
301
D
CA
CA
1_555
A
HOH
2169
I
O
HOH
1_555
139.3
A
THR
203
A
O
THR
203
1_555
A
CA
301
D
CA
CA
1_555
A
HOH
2169
I
O
HOH
1_555
73.8
A
THR
205
A
O
THR
205
1_555
A
CA
301
D
CA
CA
1_555
A
HOH
2169
I
O
HOH
1_555
81.8
A
THR
207
A
O
THR
207
1_555
A
CA
301
D
CA
CA
1_555
A
HOH
2169
I
O
HOH
1_555
147.2
A
ASP
201
A
OD1
ASP
201
1_555
A
CA
301
D
CA
CA
1_555
A
HOH
2170
I
O
HOH
1_555
116.4
A
ASP
201
A
OD2
ASP
201
1_555
A
CA
301
D
CA
CA
1_555
A
HOH
2170
I
O
HOH
1_555
79.1
A
THR
203
A
OG1
THR
203
1_555
A
CA
301
D
CA
CA
1_555
A
HOH
2170
I
O
HOH
1_555
141.2
A
THR
203
A
O
THR
203
1_555
A
CA
301
D
CA
CA
1_555
A
HOH
2170
I
O
HOH
1_555
145.2
A
THR
205
A
O
THR
205
1_555
A
CA
301
D
CA
CA
1_555
A
HOH
2170
I
O
HOH
1_555
83.7
A
THR
207
A
O
THR
207
1_555
A
CA
301
D
CA
CA
1_555
A
HOH
2170
I
O
HOH
1_555
76.6
A
HOH
2169
I
O
HOH
1_555
A
CA
301
D
CA
CA
1_555
A
HOH
2170
I
O
HOH
1_555
71.4
A
ASN
18
GLYCOSYLATION SITE
A
ASN
18
ASN
A
ASN
106
GLYCOSYLATION SITE
A
ASN
106
ASN
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
VAL
66
A
N
VAL
66
A
O
PHE
82
A
O
PHE
82
A
N
VAL
83
A
N
VAL
83
A
O
ALA
35
A
O
ALA
35
A
N
LEU
36
A
N
LEU
36
A
O
ALA
4
A
O
ALA
4
A
N
ALA
5
A
N
ALA
5
A
O
VAL
255
A
O
VAL
255
A
N
GLU
256
A
N
GLU
256
A
O
LEU
231
A
O
LEU
231
A
N
TYR
95
A
N
TYR
95
A
O
ILE
115
A
O
ILE
115
A
N
PHE
118
A
N
PHE
118
A
O
PHE
128
A
O
PHE
128
A
N
VAL
131
A
N
VAL
131
A
O
MET
164
A
O
MET
164
A
N
GLY
167
A
N
GLY
167
A
O
ARG
213
A
O
ARG
213
A
N
VAL
216
A
N
VAL
216
A
O
GLN
193
A
O
GLN
193
1
A
C1
NAG
1263
PLANAR
1
A
THR
10
34.04
50.90
1
A
ASP
42
-158.53
79.81
1
A
ALA
171
-90.13
56.83
1
A
CYS
173
44.94
-131.20
1
A
ALA
210
-93.03
56.21
23.840
-2.174
0.000
0.000
1.521
0.000
0.652
0.960
0.942
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.
0.2185
0.1662
0.169
1.950
50.125
910
17963
5.16
99.872
3.900
0.111
RANDOM
1
THROUGHOUT
0
MOLECULAR REPLACEMENT
0.185
0.162
0.800
0.8
1.200
PDB ENTRY 3DNI
MAXIMUM LIKELIHOOD
MASK BULK SOLVENT
1.950
50.125
208
2337
64
0
2065
0.013
0.022
2234
1.428
1.981
3066
6.647
5.000
275
41.771
23.981
108
13.157
15.000
336
17.287
15.000
14
0.102
0.200
343
0.006
0.021
1745
0.207
0.200
1011
0.314
0.200
1533
0.132
0.200
193
0.179
0.200
11
0.191
0.200
54
0.185
0.200
15
0.756
1.500
1332
1.370
2.000
2169
1.902
3.000
902
2.976
4.500
890
0.294
0.199
2.001
68
1226
20
99.005
21.2
1.95
48.22
4AWN
18022
2.0
0.10
1
6.88
7.48
99.9
0.57
1.95
2.06
1.32
1
7.55
99.6
refinement
REFMAC
5.5.0109
data reduction
XDS
data scaling
SCALEPACK
phasing
MOLREP
Structure of recombinant human DNase I (rhDNaseI) in complex with Magnesium and Phosphate.
1
N
N
2
N
N
3
N
N
3
N
N
4
N
N
5
N
N
6
N
N
7
N
N
8
N
N
A
GLY
12
A
GLY
12
HELX_P
A
SER
17
A
SER
17
1
1
6
A
ASN
18
A
ASN
18
HELX_P
A
SER
30
A
SER
30
1
2
13
A
LEU
45
A
LEU
45
HELX_P
A
ASN
56
A
ASN
56
1
3
12
A
ALA
136
A
ALA
136
HELX_P
A
GLY
138
A
GLY
138
5
4
3
A
ASP
139
A
ASP
139
HELX_P
A
GLY
159
A
GLY
159
1
5
21
A
ARG
177
A
ARG
177
HELX_P
A
SER
183
A
SER
183
5
6
7
A
ILE
184
A
ILE
184
HELX_P
A
SER
189
A
SER
189
1
7
6
A
GLY
218
A
GLY
218
HELX_P
A
VAL
225
A
VAL
225
1
8
8
A
ASN
234
A
ASN
234
HELX_P
A
TYR
239
A
TYR
239
1
9
6
A
SER
242
A
SER
242
HELX_P
A
SER
250
A
SER
250
1
10
9
disulf
2.063
A
CYS
173
A
SG
CYS
173
1_555
A
CYS
209
A
SG
CYS
209
1_555
covale
1.441
one
N-Glycosylation
A
ASN
18
A
ND2
ASN
18
1_555
B
NAG
1
B
C1
NAG
1_555
covale
1.429
one
N-Glycosylation
A
ASN
106
A
ND2
ASN
106
1_555
A
NAG
1263
H
C1
NAG
1_555
covale
1.442
both
B
NAG
1
B
O4
NAG
1_555
B
NAG
2
B
C1
NAG
1_555
metalc
2.231
A
GLU
39
A
OE2
GLU
39
1_555
A
MG
302
E
MG
MG
1_555
metalc
2.175
A
ASP
99
A
OD2
ASP
99
1_555
A
CA
300
C
CA
CA
1_555
metalc
2.180
A
ASP
107
A
OD2
ASP
107
1_555
A
CA
300
C
CA
CA
1_555
metalc
2.131
A
PHE
109
A
O
PHE
109
1_555
A
CA
300
C
CA
CA
1_555
metalc
2.263
A
GLU
112
A
OE1
GLU
112
1_555
A
CA
300
C
CA
CA
1_555
metalc
2.645
A
ASP
201
A
OD1
ASP
201
1_555
A
CA
301
D
CA
CA
1_555
metalc
2.397
A
ASP
201
A
OD2
ASP
201
1_555
A
CA
301
D
CA
CA
1_555
metalc
2.652
A
THR
203
A
OG1
THR
203
1_555
A
CA
301
D
CA
CA
1_555
metalc
2.440
A
THR
203
A
O
THR
203
1_555
A
CA
301
D
CA
CA
1_555
metalc
2.342
A
THR
205
A
O
THR
205
1_555
A
CA
301
D
CA
CA
1_555
metalc
2.338
A
THR
207
A
O
THR
207
1_555
A
CA
301
D
CA
CA
1_555
metalc
2.300
A
CA
300
C
CA
CA
1_555
A
HOH
2100
I
O
HOH
1_555
metalc
2.109
A
CA
300
C
CA
CA
1_555
A
HOH
2101
I
O
HOH
1_555
metalc
2.471
A
CA
301
D
CA
CA
1_555
A
HOH
2169
I
O
HOH
1_555
metalc
2.519
A
CA
301
D
CA
CA
1_555
A
HOH
2170
I
O
HOH
1_555
metalc
1.962
A
MG
302
E
MG
MG
1_555
A
PO4
310
F
O2
PO4
1_555
metalc
1.985
A
MG
302
E
MG
MG
1_555
A
HOH
2005
I
O
HOH
1_555
metalc
2.246
A
MG
302
E
MG
MG
1_555
A
HOH
2033
I
O
HOH
1_555
metalc
2.055
A
MG
302
E
MG
MG
1_555
A
HOH
2035
I
O
HOH
1_555
metalc
2.062
A
MG
302
E
MG
MG
1_555
A
HOH
2202
I
O
HOH
1_555
HYDROLASE
HYDROLASE, ENDONUCLEASE, PULMOZYME
A
SER
75
A
SER
75
1
A
TYR
76
A
TYR
76
2.81
DNAS1_HUMAN
UNP
1
P24855
23
282
4AWN
1
260
P24855
A
1
1
260
6
6
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
A
HIS
64
A
HIS
64
A
VAL
67
A
VAL
67
A
ARG
79
A
ARG
79
A
TYR
84
A
TYR
84
A
ILE
34
A
ILE
34
A
VAL
40
A
VAL
40
A
LYS
2
A
LYS
2
A
PHE
11
A
PHE
11
A
VAL
255
A
VAL
255
A
MET
258
A
MET
258
A
LEU
231
A
LEU
231
A
PRO
232
A
PRO
232
A
SER
90
A
SER
90
A
TYR
96
A
TYR
96
A
ALA
114
A
ALA
114
A
PHE
119
A
PHE
119
A
GLU
127
A
GLU
127
A
PRO
132
A
PRO
132
A
VAL
163
A
VAL
163
A
ASP
168
A
ASP
168
A
ASP
212
A
ASP
212
A
ALA
217
A
ALA
217
A
PHE
192
A
PHE
192
A
TRP
194
A
TRP
194
19
P 21 21 21