0.014172 0.000000 0.000000 0.000000 0.013416 0.000000 0.000000 0.000000 0.024290 0.00000 0.00000 0.00000 Scott, D.E. Ehebauer, M.T. Pukala, T. Marsh, M. Blundell, T.L. Venkitaraman, A.R. Abell, C. Hyvonen, M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 70.560 74.540 41.170 C8 H7 N O 133.147 1H-indol-5-ol 5-hydroxyindole non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking O4 P -3 94.971 PHOSPHATE ION non-polymer C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N O Y 2 N C Y 3 N C Y 4 N C Y 5 N C Y 6 N N Y 7 N C Y 8 N C Y 9 N C Y 10 N C N 11 N H N 12 N H N 13 N H N 14 N H N 15 N H N 16 N H N 17 N H N 18 N N N 19 S C N 20 N C N 21 N O N 22 N C N 23 N O N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N N N 32 S C N 33 N C N 34 N O N 35 N C N 36 N C N 37 N C N 38 N N N 39 N C N 40 N N N 41 N N N 42 N O N 43 N H N 44 N H N 45 N H N 46 N H N 47 N H N 48 N H N 49 N H N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N N N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N H N 75 N N N 76 S C N 77 N C N 78 N O N 79 N C N 80 N C N 81 N O N 82 N O N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N N N 92 S C N 93 N C N 94 N O N 95 N C N 96 N C N 97 N C N 98 N O N 99 N N N 100 N O N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N N N 112 S C N 113 N C N 114 N O N 115 N C N 116 N C N 117 N C N 118 N O N 119 N O N 120 N O N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N H N 129 N H N 130 N N N 131 N C N 132 N C N 133 N O N 134 N O N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N N N 141 S C N 142 N C N 143 N O N 144 N C Y 145 N C Y 146 N N Y 147 N C Y 148 N C Y 149 N N N 150 N O N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N O N 162 N H N 163 N H N 164 N N N 165 S C N 166 N C N 167 N O N 168 S C N 169 N C N 170 N C N 171 N C N 172 N O N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N N N 187 S C N 188 N C N 189 N O N 190 N C N 191 N C N 192 N C N 193 N C N 194 N O N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N N N 209 S C N 210 N C N 211 N O N 212 N C N 213 N C N 214 N C N 215 N C N 216 N N N 217 N O N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N N N 234 S C N 235 N C N 236 N O N 237 N C N 238 N C N 239 N S N 240 N C N 241 N O N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N N N 254 S C N 255 N C N 256 N O N 257 N C Y 258 N C Y 259 N C Y 260 N C Y 261 N C Y 262 N C Y 263 N C N 264 N O N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N P N 277 N O N 278 N O N 279 N O N 280 N O N 281 N N N 282 S C N 283 N C N 284 N O N 285 N C N 286 N C N 287 N C N 288 N O N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N N N 299 S C N 300 N C N 301 N O N 302 N C N 303 N O N 304 N O N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N N N 313 S C N 314 N C N 315 N O N 316 R C N 317 N O N 318 N C N 319 N O N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N N N 330 S C N 331 N C N 332 N O N 333 N C Y 334 N C Y 335 N C Y 336 N C Y 337 N N Y 338 N C Y 339 N C Y 340 N C Y 341 N C Y 342 N C N 343 N O N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N N N 357 S C N 358 N C N 359 N O N 360 N C Y 361 N C Y 362 N C Y 363 N C Y 364 N C Y 365 N C Y 366 N C N 367 N O N 368 N O N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N N N 381 S C N 382 N C N 383 N O N 384 N C N 385 N C N 386 N C N 387 N O N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 1 N sing N 2 N sing Y 3 N doub Y 4 N sing Y 5 N sing N 6 N sing Y 7 N doub N 8 N sing Y 9 N sing Y 10 N sing Y 11 N sing Y 12 N doub N 13 N sing Y 14 N sing Y 15 N doub N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N doub N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N sing N 37 N doub N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N doub N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N doub N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N doub N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N doub N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N doub N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N doub N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N doub N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N doub N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N doub N 141 N sing N 142 N sing N 143 N sing N 144 N sing Y 145 N sing Y 146 N doub Y 147 N doub N 148 N sing Y 149 N sing N 150 N sing Y 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N doub N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N doub N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N doub N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N doub N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N doub N 249 N sing N 250 N sing N 251 N sing N 252 N sing Y 253 N doub Y 254 N sing Y 255 N sing N 256 N sing Y 257 N doub N 258 N sing Y 259 N doub N 260 N sing Y 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N doub N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N doub N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N doub N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N doub N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N doub N 322 N sing N 323 N sing N 324 N sing N 325 N sing Y 326 N doub Y 327 N sing Y 328 N sing N 329 N sing Y 330 N doub Y 331 N sing Y 332 N sing N 333 N sing Y 334 N sing Y 335 N doub N 336 N sing Y 337 N doub N 338 N sing Y 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N doub N 350 N sing N 351 N sing N 352 N sing N 353 N sing Y 354 N doub Y 355 N sing Y 356 N sing N 357 N sing Y 358 N doub N 359 N sing Y 360 N doub N 361 N sing Y 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N doub N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing GE Chembiochem 1439-4227 14 332 10.1002/CBIC.201200521 23344974 Using a Fragment-Based Approach to Target Protein-Protein Interactions. 2013 10.2210/pdb4b3c/pdb pdb_00004b3c 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 OSMIC CONFOCALS IMAGE PLATE 2007-09-19 RIGAKU RAXIS NI FILTER SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU RUH3R 25502.150 DNA REPAIR AND RECOMBINATION PROTEIN RADA ATPASE, RESIDUES 108-287,300-349 YES 1 man polymer 94.971 PHOSPHATE ION 1 syn non-polymer 133.147 1H-indol-5-ol 1 syn non-polymer 18.015 water 153 nat water no no MATIGRISTGSKSLDKLLGGGIETQAITEVFGEFGSGKTQLAHTLAVMVQLPPEEGGLNGSVMWIDTENTFRPERIREIA QNRGLDPDEVLKHIAYARAFNSNHQMLLVQQAEDMIKELLNTDRPVKLLIVDSLTSHFRSEYIGRGALAERQQKLAKHLA DLHRLANLYDIAVFVTNQVQANGGHILAHSATLRVYLRKGKGGKRIARLIDAPHLPEGEAVFSITEKGIED MATIGRISTGSKSLDKLLGGGIETQAITEVFGEFGSGKTQLAHTLAVMVQLPPEEGGLNGSVMWIDTENTFRPERIREIA QNRGLDPDEVLKHIAYARAFNSNHQMLLVQQAEDMIKELLNTDRPVKLLIVDSLTSHFRSEYIGRGALAERQQKLAKHLA DLHRLANLYDIAVFVTNQVQANGGHILAHSATLRVYLRKGKGGKRIARLIDAPHLPEGEAVFSITEKGIED A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample 2261 PYROCOCCUS FURIOSUS 469008 ESCHERICHIA COLI BL21(DE3) CONTAINING PUBS520 PLASMID PBAT4 PLASMID 1 2.12 42.06 NONE 6.2 8% PEG1000, 100MM NA/K PHOSPHATE PH 6.2 struct_conn chem_comp_atom chem_comp_bond database_2 pdbx_database_status pdbx_initial_refinement_model struct_site repository Initial release Database references Data collection Derived calculations Data collection Database references Derived calculations Other Refinement description 1 0 2013-02-06 1 1 2013-02-27 1 2 2018-06-20 1 3 2023-12-20 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.status_code_sf _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id RAD51 (RADA) RADA C-TERMINAL ATPASE DOMAIN FROM PYROCOCCUS FURIOSUS RADA C-TERMINAL ATPASE DOMAIN FROM PYROCOCCUS FURIOSUS BOUND TO ATP RADA C-TERMINAL ATPASE DOMAIN FROM PYROCOCCUS FURIOSUS BOUND TO AMPPNP RADA C-TERMINAL ATPASE DOMAIN FROM PYROCOCCUS FURIOSUS BOUND TO ADP HUMANISED MONOMERIC RADA IN COMPLEX WITH INDAZOLE HUMANISED MONOMERIC RADA IN COMPLEX WITH L-METHYLESTER TRYPTOPHAN RADA C-TERMINAL ATPASE DOMAIN FROM PYROCOCCUS FURIOSUS BOUND TO GTP HUMANISED MONOMERIC RADA IN COMPLEX WITH NAPHT-1-OL HUMANISED MONOMERIC RADA IN COMPLEX WITH NAPHT-2-OL HUMANISED MONOMERIC RADA IN COMPLEX WITH 2-AMINO BENZOTHIAZOLE HUMANISED MONOMERIC RADA IN COMPLEX WITH 4-METHYLESTER INDOLE HUMANISED MONOMERIC RADA IN COMPLEX WITH FHTA TETRAPEPTIDE HUMANISED MONOMERIC RADA IN COMPLEX WITH 5-METHYL INDOLE PDBE Y PDBE 2012-07-23 REL REL PO4 PHOSPHATE ION 5H1 1H-indol-5-ol HOH water ENGINEERED RESIDUE IN CHAIN A, ILE 169 TO MET ENGINEERED RESIDUE IN CHAIN A, TYR 201 TO ALA ENGINEERED RESIDUE IN CHAIN A, VAL 202 TO TYR ENGINEERED RESIDUE IN CHAIN A, LYS 221 TO MET ENGINEERED RESIDUE IN CHAIN A, ASN 300 TO ILE 1PZN PDB ENTRY 1PZN CHAIN A PDB experimental model PO4 1350 2 PO4 PO4 1350 A 5H1 1351 3 5H1 5H1 1351 A HOH 2001 4 HOH HOH 2001 A HOH 2002 4 HOH HOH 2002 A HOH 2003 4 HOH HOH 2003 A HOH 2004 4 HOH HOH 2004 A HOH 2005 4 HOH HOH 2005 A HOH 2006 4 HOH HOH 2006 A HOH 2007 4 HOH HOH 2007 A HOH 2008 4 HOH HOH 2008 A HOH 2009 4 HOH HOH 2009 A HOH 2010 4 HOH HOH 2010 A HOH 2011 4 HOH HOH 2011 A HOH 2012 4 HOH HOH 2012 A HOH 2013 4 HOH HOH 2013 A HOH 2014 4 HOH HOH 2014 A HOH 2015 4 HOH HOH 2015 A HOH 2016 4 HOH HOH 2016 A HOH 2017 4 HOH HOH 2017 A HOH 2018 4 HOH HOH 2018 A HOH 2019 4 HOH HOH 2019 A HOH 2020 4 HOH HOH 2020 A HOH 2021 4 HOH HOH 2021 A HOH 2022 4 HOH HOH 2022 A HOH 2023 4 HOH HOH 2023 A HOH 2024 4 HOH HOH 2024 A HOH 2025 4 HOH HOH 2025 A HOH 2026 4 HOH HOH 2026 A HOH 2027 4 HOH HOH 2027 A HOH 2028 4 HOH HOH 2028 A HOH 2029 4 HOH HOH 2029 A HOH 2030 4 HOH HOH 2030 A HOH 2031 4 HOH HOH 2031 A HOH 2032 4 HOH HOH 2032 A HOH 2033 4 HOH HOH 2033 A HOH 2034 4 HOH HOH 2034 A HOH 2035 4 HOH HOH 2035 A HOH 2036 4 HOH HOH 2036 A HOH 2037 4 HOH HOH 2037 A HOH 2038 4 HOH HOH 2038 A HOH 2039 4 HOH HOH 2039 A HOH 2040 4 HOH HOH 2040 A HOH 2041 4 HOH HOH 2041 A HOH 2042 4 HOH HOH 2042 A HOH 2043 4 HOH HOH 2043 A HOH 2044 4 HOH HOH 2044 A HOH 2045 4 HOH HOH 2045 A HOH 2046 4 HOH HOH 2046 A HOH 2047 4 HOH HOH 2047 A HOH 2048 4 HOH HOH 2048 A HOH 2049 4 HOH HOH 2049 A HOH 2050 4 HOH HOH 2050 A HOH 2051 4 HOH HOH 2051 A HOH 2052 4 HOH HOH 2052 A HOH 2053 4 HOH HOH 2053 A HOH 2054 4 HOH HOH 2054 A HOH 2055 4 HOH HOH 2055 A HOH 2056 4 HOH HOH 2056 A HOH 2057 4 HOH HOH 2057 A HOH 2058 4 HOH HOH 2058 A HOH 2059 4 HOH HOH 2059 A HOH 2060 4 HOH HOH 2060 A HOH 2061 4 HOH HOH 2061 A HOH 2062 4 HOH HOH 2062 A HOH 2063 4 HOH HOH 2063 A HOH 2064 4 HOH HOH 2064 A HOH 2065 4 HOH HOH 2065 A HOH 2066 4 HOH HOH 2066 A HOH 2067 4 HOH HOH 2067 A HOH 2068 4 HOH HOH 2068 A HOH 2069 4 HOH HOH 2069 A HOH 2070 4 HOH HOH 2070 A HOH 2071 4 HOH HOH 2071 A HOH 2072 4 HOH HOH 2072 A HOH 2073 4 HOH HOH 2073 A HOH 2074 4 HOH HOH 2074 A HOH 2075 4 HOH HOH 2075 A HOH 2076 4 HOH HOH 2076 A HOH 2077 4 HOH HOH 2077 A HOH 2078 4 HOH HOH 2078 A HOH 2079 4 HOH HOH 2079 A HOH 2080 4 HOH HOH 2080 A HOH 2081 4 HOH HOH 2081 A HOH 2082 4 HOH HOH 2082 A HOH 2083 4 HOH HOH 2083 A HOH 2084 4 HOH HOH 2084 A HOH 2085 4 HOH HOH 2085 A HOH 2086 4 HOH HOH 2086 A HOH 2087 4 HOH HOH 2087 A HOH 2088 4 HOH HOH 2088 A HOH 2089 4 HOH HOH 2089 A HOH 2090 4 HOH HOH 2090 A HOH 2091 4 HOH HOH 2091 A HOH 2092 4 HOH HOH 2092 A HOH 2093 4 HOH HOH 2093 A HOH 2094 4 HOH HOH 2094 A HOH 2095 4 HOH HOH 2095 A HOH 2096 4 HOH HOH 2096 A HOH 2097 4 HOH HOH 2097 A HOH 2098 4 HOH HOH 2098 A HOH 2099 4 HOH HOH 2099 A HOH 2100 4 HOH HOH 2100 A HOH 2101 4 HOH HOH 2101 A HOH 2102 4 HOH HOH 2102 A HOH 2103 4 HOH HOH 2103 A HOH 2104 4 HOH HOH 2104 A HOH 2105 4 HOH HOH 2105 A HOH 2106 4 HOH HOH 2106 A HOH 2107 4 HOH HOH 2107 A HOH 2108 4 HOH HOH 2108 A HOH 2109 4 HOH HOH 2109 A HOH 2110 4 HOH HOH 2110 A HOH 2111 4 HOH HOH 2111 A HOH 2112 4 HOH HOH 2112 A HOH 2113 4 HOH HOH 2113 A HOH 2114 4 HOH HOH 2114 A HOH 2115 4 HOH HOH 2115 A HOH 2116 4 HOH HOH 2116 A HOH 2117 4 HOH HOH 2117 A HOH 2118 4 HOH HOH 2118 A HOH 2119 4 HOH HOH 2119 A HOH 2120 4 HOH HOH 2120 A HOH 2121 4 HOH HOH 2121 A HOH 2122 4 HOH HOH 2122 A HOH 2123 4 HOH HOH 2123 A HOH 2124 4 HOH HOH 2124 A HOH 2125 4 HOH HOH 2125 A HOH 2126 4 HOH HOH 2126 A HOH 2127 4 HOH HOH 2127 A HOH 2128 4 HOH HOH 2128 A HOH 2129 4 HOH HOH 2129 A HOH 2130 4 HOH HOH 2130 A HOH 2131 4 HOH HOH 2131 A HOH 2132 4 HOH HOH 2132 A HOH 2133 4 HOH HOH 2133 A HOH 2134 4 HOH HOH 2134 A HOH 2135 4 HOH HOH 2135 A HOH 2136 4 HOH HOH 2136 A HOH 2137 4 HOH HOH 2137 A HOH 2138 4 HOH HOH 2138 A HOH 2139 4 HOH HOH 2139 A HOH 2140 4 HOH HOH 2140 A HOH 2141 4 HOH HOH 2141 A HOH 2142 4 HOH HOH 2142 A HOH 2143 4 HOH HOH 2143 A HOH 2144 4 HOH HOH 2144 A HOH 2145 4 HOH HOH 2145 A HOH 2146 4 HOH HOH 2146 A HOH 2147 4 HOH HOH 2147 A HOH 2148 4 HOH HOH 2148 A HOH 2149 4 HOH HOH 2149 A HOH 2150 4 HOH HOH 2150 A HOH 2151 4 HOH HOH 2151 A HOH 2152 4 HOH HOH 2152 A HOH 2153 4 HOH HOH 2153 A n 1 107 A ALA 108 n 2 ALA 108 A THR 109 n 3 THR 109 A ILE 110 n 4 ILE 110 A GLY 111 n 5 GLY 111 A ARG 112 n 6 ARG 112 A ILE 113 n 7 ILE 113 A SER 114 n 8 SER 114 A THR 115 n 9 THR 115 A GLY 116 n 10 GLY 116 A SER 117 n 11 SER 117 A LYS 118 n 12 LYS 118 A SER 119 n 13 SER 119 A LEU 120 n 14 LEU 120 A ASP 121 n 15 ASP 121 A LYS 122 n 16 LYS 122 A LEU 123 n 17 LEU 123 A LEU 124 n 18 LEU 124 A GLY 125 n 19 GLY 125 A GLY 126 n 20 GLY 126 A GLY 127 n 21 GLY 127 A ILE 128 n 22 ILE 128 A GLU 129 n 23 GLU 129 A THR 130 n 24 THR 130 A GLN 131 n 25 GLN 131 A ALA 132 n 26 ALA 132 A ILE 133 n 27 ILE 133 A THR 134 n 28 THR 134 A GLU 135 n 29 GLU 135 A VAL 136 n 30 VAL 136 A PHE 137 n 31 PHE 137 A GLY 138 n 32 GLY 138 A GLU 139 n 33 GLU 139 A PHE 140 n 34 PHE 140 A GLY 141 n 35 GLY 141 A SER 142 n 36 SER 142 A GLY 143 n 37 GLY 143 A LYS 144 n 38 LYS 144 A THR 145 n 39 THR 145 A GLN 146 n 40 GLN 146 A LEU 147 n 41 LEU 147 A ALA 148 n 42 ALA 148 A HIS 149 n 43 HIS 149 A THR 150 n 44 THR 150 A LEU 151 n 45 LEU 151 A ALA 152 n 46 ALA 152 A VAL 153 n 47 VAL 153 A MET 154 n 48 MET 154 A VAL 155 n 49 VAL 155 A GLN 156 n 50 GLN 156 A LEU 157 n 51 LEU 157 A PRO 158 n 52 PRO 158 A PRO 159 n 53 PRO 159 A GLU 160 n 54 GLU 160 A GLU 161 n 55 GLU 161 A GLY 162 n 56 GLY 162 A GLY 163 n 57 GLY 163 A LEU 164 n 58 LEU 164 A ASN 165 n 59 ASN 165 A GLY 166 n 60 GLY 166 A SER 167 n 61 SER 167 A VAL 168 n 62 VAL 168 A MET 169 n 63 MET 169 A TRP 170 n 64 TRP 170 A ILE 171 n 65 ILE 171 A ASP 172 n 66 ASP 172 A THR 173 n 67 THR 173 A GLU 174 n 68 GLU 174 A ASN 175 n 69 ASN 175 A THR 176 n 70 THR 176 A PHE 177 n 71 PHE 177 A ARG 178 n 72 ARG 178 A PRO 179 n 73 PRO 179 A GLU 180 n 74 GLU 180 A ARG 181 n 75 ARG 181 A ILE 182 n 76 ILE 182 A ARG 183 n 77 ARG 183 A GLU 184 n 78 GLU 184 A ILE 185 n 79 ILE 185 A ALA 186 n 80 ALA 186 A GLN 187 n 81 GLN 187 A ASN 188 n 82 ASN 188 A ARG 189 n 83 ARG 189 A GLY 190 n 84 GLY 190 A LEU 191 n 85 LEU 191 A ASP 192 n 86 ASP 192 A PRO 193 n 87 PRO 193 A ASP 194 n 88 ASP 194 A GLU 195 n 89 GLU 195 A VAL 196 n 90 VAL 196 A LEU 197 n 91 LEU 197 A LYS 198 n 92 LYS 198 A HIS 199 n 93 HIS 199 A ILE 200 n 94 ILE 200 A ALA 201 n 95 ALA 201 A TYR 202 n 96 TYR 202 A ALA 203 n 97 ALA 203 A ARG 204 n 98 ARG 204 A ALA 205 n 99 ALA 205 A PHE 206 n 100 PHE 206 A ASN 207 n 101 ASN 207 A SER 208 n 102 SER 208 A ASN 209 n 103 ASN 209 A HIS 210 n 104 HIS 210 A GLN 211 n 105 GLN 211 A MET 212 n 106 MET 212 A LEU 213 n 107 LEU 213 A LEU 214 n 108 LEU 214 A VAL 215 n 109 VAL 215 A GLN 216 n 110 GLN 216 A GLN 217 n 111 GLN 217 A ALA 218 n 112 ALA 218 A GLU 219 n 113 GLU 219 A ASP 220 n 114 ASP 220 A MET 221 n 115 MET 221 A ILE 222 n 116 ILE 222 A LYS 223 n 117 LYS 223 A GLU 224 n 118 GLU 224 A LEU 225 n 119 LEU 225 A LEU 226 n 120 LEU 226 A ASN 227 n 121 ASN 227 A THR 228 n 122 THR 228 A ASP 229 n 123 ASP 229 A ARG 230 n 124 ARG 230 A PRO 231 n 125 PRO 231 A VAL 232 n 126 VAL 232 A LYS 233 n 127 LYS 233 A LEU 234 n 128 LEU 234 A LEU 235 n 129 LEU 235 A ILE 236 n 130 ILE 236 A VAL 237 n 131 VAL 237 A ASP 238 n 132 ASP 238 A SER 239 n 133 SER 239 A LEU 240 n 134 LEU 240 A THR 241 n 135 THR 241 A SER 242 n 136 SER 242 A HIS 243 n 137 HIS 243 A PHE 244 n 138 PHE 244 A ARG 245 n 139 ARG 245 A SER 246 n 140 SER 246 A GLU 247 n 141 GLU 247 A TYR 248 n 142 TYR 248 A ILE 249 n 143 ILE 249 A GLY 250 n 144 GLY 250 A ARG 251 n 145 ARG 251 A GLY 252 n 146 GLY 252 A ALA 253 n 147 ALA 253 A LEU 254 n 148 LEU 254 A ALA 255 n 149 ALA 255 A GLU 256 n 150 GLU 256 A ARG 257 n 151 ARG 257 A GLN 258 n 152 GLN 258 A GLN 259 n 153 GLN 259 A LYS 260 n 154 LYS 260 A LEU 261 n 155 LEU 261 A ALA 262 n 156 ALA 262 A LYS 263 n 157 LYS 263 A HIS 264 n 158 HIS 264 A LEU 265 n 159 LEU 265 A ALA 266 n 160 ALA 266 A ASP 267 n 161 ASP 267 A LEU 268 n 162 LEU 268 A HIS 269 n 163 HIS 269 A ARG 270 n 164 ARG 270 A LEU 271 n 165 LEU 271 A ALA 272 n 166 ALA 272 A ASN 273 n 167 ASN 273 A LEU 274 n 168 LEU 274 A TYR 275 n 169 TYR 275 A ASP 276 n 170 ASP 276 A ILE 277 n 171 ILE 277 A ALA 278 n 172 ALA 278 A VAL 279 n 173 VAL 279 A PHE 280 n 174 PHE 280 A VAL 281 n 175 VAL 281 A THR 282 n 176 THR 282 A ASN 283 n 177 ASN 283 A GLN 284 n 178 GLN 284 A VAL 285 n 179 VAL 285 A GLN 286 n 180 GLN 286 A ALA 287 n 181 ALA 287 A ASN 300 n 182 ASN 300 A GLY 301 n 183 GLY 301 A GLY 302 n 184 GLY 302 A HIS 303 n 185 HIS 303 A ILE 304 n 186 ILE 304 A LEU 305 n 187 LEU 305 A ALA 306 n 188 ALA 306 A HIS 307 n 189 HIS 307 A SER 308 n 190 SER 308 A ALA 309 n 191 ALA 309 A THR 310 n 192 THR 310 A LEU 311 n 193 LEU 311 A ARG 312 n 194 ARG 312 A VAL 313 n 195 VAL 313 A TYR 314 n 196 TYR 314 A LEU 315 n 197 LEU 315 A ARG 316 n 198 ARG 316 A LYS 317 n 199 LYS 317 A GLY 318 n 200 GLY 318 A LYS 319 n 201 LYS 319 A GLY 320 n 202 GLY 320 A GLY 321 n 203 GLY 321 A LYS 322 n 204 LYS 322 A ARG 323 n 205 ARG 323 A ILE 324 n 206 ILE 324 A ALA 325 n 207 ALA 325 A ARG 326 n 208 ARG 326 A LEU 327 n 209 LEU 327 A ILE 328 n 210 ILE 328 A ASP 329 n 211 ASP 329 A n 212 330 A n 213 331 A n 214 332 A n 215 333 A n 216 334 A n 217 335 A GLY 336 n 218 GLY 336 A GLU 337 n 219 GLU 337 A ALA 338 n 220 ALA 338 A VAL 339 n 221 VAL 339 A PHE 340 n 222 PHE 340 A SER 341 n 223 SER 341 A ILE 342 n 224 ILE 342 A THR 343 n 225 THR 343 A GLU 344 n 226 GLU 344 A LYS 345 n 227 LYS 345 A GLY 346 n 228 GLY 346 A ILE 347 n 229 ILE 347 A GLU 348 n 230 GLU 348 A ASP 349 n 231 ASP 349 A software_defined_assembly PISA 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N ILE 113 A N ILE 7 A O ILE 128 A O ILE 22 A N ALA 201 A N ALA 95 A O VAL 168 A O VAL 62 A O SER 167 A O SER 61 A N LYS 233 A N LYS 127 A N LEU 235 A N LEU 129 A O ALA 278 A O ALA 172 A N VAL 279 A N VAL 173 A O ALA 132 A O ALA 26 A N GLU 135 A N GLU 29 A O LEU 311 A O LEU 193 A N ARG 316 A N ARG 198 A O ILE 324 A O ILE 206 A N ALA 325 A N ALA 207 A O ALA 338 A O ALA 220 A N THR 343 A N THR 225 A O GLY 346 A O GLY 228 1 A MET 107 A MET 1 1 Y 1 A ALA 330 A ALA 212 1 Y 1 A PRO 331 A PRO 213 1 Y 1 A HIS 332 A HIS 214 1 Y 1 A LEU 333 A LEU 215 1 Y 1 A PRO 334 A PRO 216 1 Y 1 A GLU 335 A GLU 217 1 Y 1 A A O O SER HOH 308 2022 1.90 B 1 A A O O ALA HOH 309 2127 2.02 B 1 A A OD1 NE ASN ARG 175 204 2.10 1 A A O N ILE ALA 304 306 2.12 B 1 A A HIS ILE 303 304 B B -147.05 1 A A ILE LEU 304 305 B -139.74 1 A ALA 287 B -20.17 117.89 1 A ASN 300 B 75.05 -10.87 1 A ILE 304 B -34.35 138.40 1 A LEU 305 -62.82 36.20 1 A LEU 305 -25.68 36.20 1 A ALA 306 32.46 -121.65 1 A ALA 309 B 75.04 135.49 1.2127 0.0000 0.0000 -0.7267 0.0000 -0.4861 0.2612 0.2076 0.2103 1.900 35.560 911 17690 5.2 99.83 0.51 1 2.16 MOLECULAR REPLACEMENT 25.39 0.49 0.80 PDB ENTRY 1PZN CHAIN A ML FLAT BULK SOLVENT MODEL 61.012 0.400 1.900 35.560 153 1907 15 0 1739 0.010 1881 1.186 2549 16.253 708 0.086 288 0.003 334 0.4793 0.4065 2.0002 129 2318 99.00 0.3293 0.2416 2.1255 133 2361 100.00 0.2598 0.1863 2.2896 128 2366 100.00 0.2801 0.1917 2.5200 135 2367 100.00 0.2577 0.2046 2.8845 120 2393 100.00 0.2605 0.1904 3.6336 122 2420 100.00 0.1985 0.1906 35.5658 144 2554 100.00 26.8 1.89 35.13 4B3C 17821 2.0 0.12 1 14.65 6.6 98.8 0.74 1.89 2.00 2.55 1 6.4 93.0 refinement PHENIX (PHENIX.REFINE) data reduction XDS data scaling XDS phasing AMoRE Humanised monomeric RadA in complex with 5-hydroxy indole 1 N N 2 N N 3 N N 4 N N A SER 117 A SER 11 HELX_P A GLY 125 A GLY 19 1 1 9 A GLY 143 A GLY 37 HELX_P A VAL 155 A VAL 49 1 2 13 A PRO 158 A PRO 52 HELX_P A GLY 162 A GLY 56 5 3 5 A ARG 178 A ARG 72 HELX_P A ASN 188 A ASN 82 1 4 11 A ASP 192 A ASP 86 HELX_P A HIS 199 A HIS 93 1 5 8 A ASN 207 A ASN 101 HELX_P A LEU 226 A LEU 120 1 6 20 A THR 241 A THR 135 HELX_P A TYR 248 A TYR 142 1 7 8 A ALA 253 A ALA 147 HELX_P A ASP 276 A ASP 170 1 8 24 A LYS 319 A LYS 201 HELX_P A GLY 321 A GLY 203 5 9 3 HYDROLASE HYDROLASE, RECOMBINASE, THERMOSTABLE, PEPTIDE-BINDING A ASP 238 A ASP 132 1 A SER 239 A SER 133 4.28 RADA_PYRFU UNP 1 O74036 108 287 4B3C 108 287 O74036 A 1 2 181 300 349 4B3C 300 349 O74036 A 1 182 231 1 expression tag MET 107 4B3C A O74036 UNP 1 1 ILE engineered mutation MET 169 4B3C A O74036 UNP 169 63 1 TYR engineered mutation ALA 201 4B3C A O74036 UNP 201 95 1 VAL engineered mutation TYR 202 4B3C A O74036 UNP 202 96 1 LYS engineered mutation MET 221 4B3C A O74036 UNP 221 115 1 ILE engineered mutation ASN 300 4B3C A O74036 UNP 300 182 2 9 anti-parallel parallel parallel parallel parallel parallel anti-parallel anti-parallel anti-parallel A ARG 112 A ARG 6 A ILE 113 A ILE 7 A ILE 128 A ILE 22 A GLU 129 A GLU 23 A ILE 200 A ILE 94 A ARG 204 A ARG 98 A SER 167 A SER 61 A ASP 172 A ASP 66 A VAL 232 A VAL 126 A ASP 238 A ASP 132 A ALA 278 A ALA 172 A GLN 284 A GLN 178 A ALA 132 A ALA 26 A GLY 138 A GLY 32 A LEU 311 A LEU 193 A LYS 317 A LYS 199 A ARG 323 A ARG 205 A LEU 327 A LEU 209 A ALA 338 A ALA 220 A THR 343 A THR 225 A GLY 346 A GLY 228 A GLU 348 A GLU 230 BINDING SITE FOR RESIDUE PO4 A 1350 A PO4 1350 Software 10 BINDING SITE FOR RESIDUE 5H1 A 1351 A 5H1 1351 Software 5 A GLU 139 A GLU 33 10 1_555 A GLY 141 A GLY 35 10 1_555 A SER 142 A SER 36 10 1_555 A GLY 143 A GLY 37 10 1_555 A LYS 144 A LYS 38 10 1_555 A THR 145 A THR 39 10 1_555 A HOH 2024 D HOH 10 1_555 A HOH 2025 D HOH 10 1_555 A HOH 2026 D HOH 10 1_555 A HOH 2153 D HOH 10 1_555 A MET 169 A MET 63 5 1_555 A ILE 171 A ILE 65 5 1_555 A ALA 201 A ALA 95 5 1_555 A LEU 214 A LEU 108 5 1_555 A HOH 2082 D HOH 5 1_555 18 P 21 21 2