0.011117 0.000000 0.000000 0.000000 0.011117 0.000000 0.000000 0.000000 0.011117 0.00000 0.00000 0.00000 Lutje Hulsik, D. Sabin, C. Macheboeuf, P. Weissenhorn, W. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 24 90.00 90.00 90.00 89.950 89.950 89.950 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N O N 138 N H N 139 N H N 140 N N N 141 S C N 142 N C N 143 N O N 144 S C N 145 N C N 146 N C N 147 N C N 148 N O N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N N N 163 S C N 164 N C N 165 N O N 166 N C N 167 N C N 168 N C N 169 N C N 170 N O N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N N N 185 S C N 186 N C N 187 N O N 188 N C N 189 N C N 190 N C N 191 N C N 192 N N N 193 N O N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N N N 210 S C N 211 N C N 212 N O N 213 N C N 214 N C N 215 N S N 216 N C N 217 N O N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N N N 230 S C N 231 N C N 232 N O N 233 N C Y 234 N C Y 235 N C Y 236 N C Y 237 N C Y 238 N C Y 239 N C N 240 N O N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N N N 253 S C N 254 N C N 255 N O N 256 N C N 257 N C N 258 N C N 259 N O N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N N N 270 S C N 271 N C N 272 N O N 273 N C N 274 N O N 275 N O N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N N N 284 S C N 285 N C N 286 N O N 287 R C N 288 N O N 289 N C N 290 N O N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N N N 301 S C N 302 N C N 303 N O N 304 N C Y 305 N C Y 306 N C Y 307 N C Y 308 N N Y 309 N C Y 310 N C Y 311 N C Y 312 N C Y 313 N C N 314 N O N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N N N 328 S C N 329 N C N 330 N O N 331 N C Y 332 N C Y 333 N C Y 334 N C Y 335 N C Y 336 N C Y 337 N C N 338 N O N 339 N O N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N N N 352 S C N 353 N C N 354 N O N 355 N C N 356 N C N 357 N C N 358 N O N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N doub N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N doub N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N doub N 223 N sing N 224 N sing N 225 N sing N 226 N sing Y 227 N doub Y 228 N sing Y 229 N sing N 230 N sing Y 231 N doub N 232 N sing Y 233 N doub N 234 N sing Y 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N doub N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N doub N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N doub N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N doub N 292 N sing N 293 N sing N 294 N sing N 295 N sing Y 296 N doub Y 297 N sing Y 298 N sing N 299 N sing Y 300 N doub Y 301 N sing Y 302 N sing N 303 N sing Y 304 N sing Y 305 N doub N 306 N sing Y 307 N doub N 308 N sing Y 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N doub N 320 N sing N 321 N sing N 322 N sing N 323 N sing Y 324 N doub Y 325 N sing Y 326 N sing N 327 N sing Y 328 N doub N 329 N sing Y 330 N doub N 331 N sing Y 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N doub N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing US Plos Pathog. 1553-7366 9 3202 10.1371/JOURNAL.PPAT.1003202 23505368 A Gp41 Mper-Specific Llama Vhh Requires a Hydrophobic Cdr3 for Neutralization But not for Antigen Recognition. 2013 10.2210/pdb4b50/pdb pdb_00004b50 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD ADSC CCD SINGLE WAVELENGTH M x-ray 1 0.9395 1.0 ID14-4 ESRF 0.9395 SYNCHROTRON ESRF BEAMLINE ID14-4 13351.953 2H10 LLAMA VHH 1 man polymer 18.015 water 172 nat water no no EVQLVESGGGLVQPGGSLRLSCAASGSISSVDVMSWYRQAPGKQRELVAFITDRGRTNYKVSVKGRFTISRDNSKNMVYL QMNSLKPEDTADYLCRAESRTSWSSPSPLDVWGRGTQVTVSS EVQLVESGGGLVQPGGSLRLSCAASGSISSVDVMSWYRQAPGKQRELVAFITDRGRTNYKVSVKGRFTISRDNSKNMVYL QMNSLKPEDTADYLCRAESRTSWSSPSPLDVWGRGTQVTVSS A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n LLAMA sample 9844 LAMA GLAMA 511693 ESCHERICHIA COLI BL21 GOLD PMEK220 PLASMID 1 2.21 44 NONE 9 0.1 M BICINE, 3.2 M (NH4)2SO4, PH 9 chem_comp_atom chem_comp_bond database_2 pdbx_database_status pdbx_initial_refinement_model repository Initial release Data collection Database references Other Refinement description 1 0 2013-03-27 1 1 2023-12-20 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.status_code_sf PDBE Y PDBE 2012-08-02 REL REL 1 A O HOH 2006 6.35 1 A O HOH 2041 6.26 HOH water 3EZJ PDB ENTRY 3EZJ PDB experimental model HOH 2001 2 HOH HOH 2001 A HOH 2002 2 HOH HOH 2002 A HOH 2003 2 HOH HOH 2003 A HOH 2004 2 HOH HOH 2004 A HOH 2005 2 HOH HOH 2005 A HOH 2006 2 HOH HOH 2006 A HOH 2007 2 HOH HOH 2007 A HOH 2008 2 HOH HOH 2008 A HOH 2009 2 HOH HOH 2009 A HOH 2010 2 HOH HOH 2010 A HOH 2011 2 HOH HOH 2011 A HOH 2012 2 HOH HOH 2012 A HOH 2013 2 HOH HOH 2013 A HOH 2014 2 HOH HOH 2014 A HOH 2015 2 HOH HOH 2015 A HOH 2016 2 HOH HOH 2016 A HOH 2017 2 HOH HOH 2017 A HOH 2018 2 HOH HOH 2018 A HOH 2019 2 HOH HOH 2019 A HOH 2020 2 HOH HOH 2020 A HOH 2021 2 HOH HOH 2021 A HOH 2022 2 HOH HOH 2022 A HOH 2023 2 HOH HOH 2023 A HOH 2024 2 HOH HOH 2024 A HOH 2025 2 HOH HOH 2025 A HOH 2026 2 HOH HOH 2026 A HOH 2027 2 HOH HOH 2027 A HOH 2028 2 HOH HOH 2028 A HOH 2029 2 HOH HOH 2029 A HOH 2030 2 HOH HOH 2030 A HOH 2031 2 HOH HOH 2031 A HOH 2032 2 HOH HOH 2032 A HOH 2033 2 HOH HOH 2033 A HOH 2034 2 HOH HOH 2034 A HOH 2035 2 HOH HOH 2035 A HOH 2036 2 HOH HOH 2036 A HOH 2037 2 HOH HOH 2037 A HOH 2038 2 HOH HOH 2038 A HOH 2039 2 HOH HOH 2039 A HOH 2040 2 HOH HOH 2040 A HOH 2041 2 HOH HOH 2041 A HOH 2042 2 HOH HOH 2042 A HOH 2043 2 HOH HOH 2043 A HOH 2044 2 HOH HOH 2044 A HOH 2045 2 HOH HOH 2045 A HOH 2046 2 HOH HOH 2046 A HOH 2047 2 HOH HOH 2047 A HOH 2048 2 HOH HOH 2048 A HOH 2049 2 HOH HOH 2049 A HOH 2050 2 HOH HOH 2050 A HOH 2051 2 HOH HOH 2051 A HOH 2052 2 HOH HOH 2052 A HOH 2053 2 HOH HOH 2053 A HOH 2054 2 HOH HOH 2054 A HOH 2055 2 HOH HOH 2055 A HOH 2056 2 HOH HOH 2056 A HOH 2057 2 HOH HOH 2057 A HOH 2058 2 HOH HOH 2058 A HOH 2059 2 HOH HOH 2059 A HOH 2060 2 HOH HOH 2060 A HOH 2061 2 HOH HOH 2061 A HOH 2062 2 HOH HOH 2062 A HOH 2063 2 HOH HOH 2063 A HOH 2064 2 HOH HOH 2064 A HOH 2065 2 HOH HOH 2065 A HOH 2066 2 HOH HOH 2066 A HOH 2067 2 HOH HOH 2067 A HOH 2068 2 HOH HOH 2068 A HOH 2069 2 HOH HOH 2069 A HOH 2070 2 HOH HOH 2070 A HOH 2071 2 HOH HOH 2071 A HOH 2072 2 HOH HOH 2072 A HOH 2073 2 HOH HOH 2073 A HOH 2074 2 HOH HOH 2074 A HOH 2075 2 HOH HOH 2075 A HOH 2076 2 HOH HOH 2076 A HOH 2077 2 HOH HOH 2077 A HOH 2078 2 HOH HOH 2078 A HOH 2079 2 HOH HOH 2079 A HOH 2080 2 HOH HOH 2080 A HOH 2081 2 HOH HOH 2081 A HOH 2082 2 HOH HOH 2082 A HOH 2083 2 HOH HOH 2083 A HOH 2084 2 HOH HOH 2084 A HOH 2085 2 HOH HOH 2085 A HOH 2086 2 HOH HOH 2086 A HOH 2087 2 HOH HOH 2087 A HOH 2088 2 HOH HOH 2088 A HOH 2089 2 HOH HOH 2089 A HOH 2090 2 HOH HOH 2090 A HOH 2091 2 HOH HOH 2091 A HOH 2092 2 HOH HOH 2092 A HOH 2093 2 HOH HOH 2093 A HOH 2094 2 HOH HOH 2094 A HOH 2095 2 HOH HOH 2095 A HOH 2096 2 HOH HOH 2096 A HOH 2097 2 HOH HOH 2097 A HOH 2098 2 HOH HOH 2098 A HOH 2099 2 HOH HOH 2099 A HOH 2100 2 HOH HOH 2100 A HOH 2101 2 HOH HOH 2101 A HOH 2102 2 HOH HOH 2102 A HOH 2103 2 HOH HOH 2103 A HOH 2104 2 HOH HOH 2104 A HOH 2105 2 HOH HOH 2105 A HOH 2106 2 HOH HOH 2106 A HOH 2107 2 HOH HOH 2107 A HOH 2108 2 HOH HOH 2108 A HOH 2109 2 HOH HOH 2109 A HOH 2110 2 HOH HOH 2110 A HOH 2111 2 HOH HOH 2111 A HOH 2112 2 HOH HOH 2112 A HOH 2113 2 HOH HOH 2113 A HOH 2114 2 HOH HOH 2114 A HOH 2115 2 HOH HOH 2115 A HOH 2116 2 HOH HOH 2116 A HOH 2117 2 HOH HOH 2117 A HOH 2118 2 HOH HOH 2118 A HOH 2119 2 HOH HOH 2119 A HOH 2120 2 HOH HOH 2120 A HOH 2121 2 HOH HOH 2121 A HOH 2122 2 HOH HOH 2122 A HOH 2123 2 HOH HOH 2123 A HOH 2124 2 HOH HOH 2124 A HOH 2125 2 HOH HOH 2125 A HOH 2126 2 HOH HOH 2126 A HOH 2127 2 HOH HOH 2127 A HOH 2128 2 HOH HOH 2128 A HOH 2129 2 HOH HOH 2129 A HOH 2130 2 HOH HOH 2130 A HOH 2131 2 HOH HOH 2131 A HOH 2132 2 HOH HOH 2132 A HOH 2133 2 HOH HOH 2133 A HOH 2134 2 HOH HOH 2134 A HOH 2135 2 HOH HOH 2135 A HOH 2136 2 HOH HOH 2136 A HOH 2137 2 HOH HOH 2137 A HOH 2138 2 HOH HOH 2138 A HOH 2139 2 HOH HOH 2139 A HOH 2140 2 HOH HOH 2140 A HOH 2141 2 HOH HOH 2141 A HOH 2142 2 HOH HOH 2142 A HOH 2143 2 HOH HOH 2143 A HOH 2144 2 HOH HOH 2144 A HOH 2145 2 HOH HOH 2145 A HOH 2146 2 HOH HOH 2146 A HOH 2147 2 HOH HOH 2147 A HOH 2148 2 HOH HOH 2148 A HOH 2149 2 HOH HOH 2149 A HOH 2150 2 HOH HOH 2150 A HOH 2151 2 HOH HOH 2151 A HOH 2152 2 HOH HOH 2152 A HOH 2153 2 HOH HOH 2153 A HOH 2154 2 HOH HOH 2154 A HOH 2155 2 HOH HOH 2155 A HOH 2156 2 HOH HOH 2156 A HOH 2157 2 HOH HOH 2157 A HOH 2158 2 HOH HOH 2158 A HOH 2159 2 HOH HOH 2159 A HOH 2160 2 HOH HOH 2160 A HOH 2161 2 HOH HOH 2161 A HOH 2162 2 HOH HOH 2162 A HOH 2163 2 HOH HOH 2163 A HOH 2164 2 HOH HOH 2164 A HOH 2165 2 HOH HOH 2165 A HOH 2166 2 HOH HOH 2166 A HOH 2167 2 HOH HOH 2167 A HOH 2168 2 HOH HOH 2168 A HOH 2169 2 HOH HOH 2169 A HOH 2170 2 HOH HOH 2170 A HOH 2171 2 HOH HOH 2171 A HOH 2172 2 HOH HOH 2172 A GLU 1 n 1 GLU 1 A VAL 2 n 2 VAL 2 A GLN 3 n 3 GLN 3 A LEU 4 n 4 LEU 4 A VAL 5 n 5 VAL 5 A GLU 6 n 6 GLU 6 A SER 7 n 7 SER 7 A GLY 8 n 8 GLY 8 A GLY 9 n 9 GLY 9 A GLY 10 n 10 GLY 10 A LEU 11 n 11 LEU 11 A VAL 12 n 12 VAL 12 A GLN 13 n 13 GLN 13 A PRO 14 n 14 PRO 14 A GLY 15 n 15 GLY 15 A GLY 16 n 16 GLY 16 A SER 17 n 17 SER 17 A LEU 18 n 18 LEU 18 A ARG 19 n 19 ARG 19 A LEU 20 n 20 LEU 20 A SER 21 n 21 SER 21 A CYS 22 n 22 CYS 22 A ALA 23 n 23 ALA 23 A ALA 24 n 24 ALA 24 A SER 25 n 25 SER 25 A GLY 26 n 26 GLY 26 A SER 27 n 27 SER 27 A ILE 28 n 28 ILE 28 A SER 29 n 29 SER 29 A SER 30 n 30 SER 30 A VAL 31 n 31 VAL 31 A ASP 32 n 32 ASP 32 A VAL 33 n 33 VAL 33 A MET 34 n 34 MET 34 A SER 35 n 35 SER 35 A TRP 36 n 36 TRP 36 A TYR 37 n 37 TYR 37 A ARG 38 n 38 ARG 38 A GLN 39 n 39 GLN 39 A ALA 40 n 40 ALA 40 A PRO 41 n 41 PRO 41 A GLY 42 n 42 GLY 42 A LYS 43 n 43 LYS 43 A GLN 44 n 44 GLN 44 A ARG 45 n 45 ARG 45 A GLU 46 n 46 GLU 46 A LEU 47 n 47 LEU 47 A VAL 48 n 48 VAL 48 A ALA 49 n 49 ALA 49 A PHE 50 n 50 PHE 50 A ILE 51 n 51 ILE 51 A THR 52 n 52 THR 52 A ASP 53 n 53 ASP 53 A ARG 54 n 54 ARG 54 A GLY 55 n 55 GLY 55 A ARG 56 n 56 ARG 56 A THR 57 n 57 THR 57 A ASN 58 n 58 ASN 58 A TYR 59 n 59 TYR 59 A LYS 60 n 60 LYS 60 A VAL 61 n 61 VAL 61 A SER 62 n 62 SER 62 A VAL 63 n 63 VAL 63 A LYS 64 n 64 LYS 64 A GLY 65 n 65 GLY 65 A ARG 66 n 66 ARG 66 A PHE 67 n 67 PHE 67 A THR 68 n 68 THR 68 A ILE 69 n 69 ILE 69 A SER 70 n 70 SER 70 A ARG 71 n 71 ARG 71 A ASP 72 n 72 ASP 72 A ASN 73 n 73 ASN 73 A SER 74 n 74 SER 74 A LYS 75 n 75 LYS 75 A ASN 76 n 76 ASN 76 A MET 77 n 77 MET 77 A VAL 78 n 78 VAL 78 A TYR 79 n 79 TYR 79 A LEU 80 n 80 LEU 80 A GLN 81 n 81 GLN 81 A MET 82 n 82 MET 82 A ASN 82 n 83 A ASN 82 A SER 82 n 84 B SER 82 A LEU 82 n 85 C LEU 82 A LYS 83 n 86 LYS 83 A PRO 84 n 87 PRO 84 A GLU 85 n 88 GLU 85 A ASP 86 n 89 ASP 86 A THR 87 n 90 THR 87 A ALA 88 n 91 ALA 88 A ASP 89 n 92 ASP 89 A TYR 90 n 93 TYR 90 A LEU 91 n 94 LEU 91 A CYS 92 n 95 CYS 92 A ARG 93 n 96 ARG 93 A ALA 94 n 97 ALA 94 A GLU 95 n 98 GLU 95 A SER 96 n 99 SER 96 A ARG 97 n 100 ARG 97 A THR 98 n 101 THR 98 A SER 99 n 102 SER 99 A TRP 100 n 103 TRP 100 A SER 100 n 104 A SER 100 A SER 100 n 105 B SER 100 A PRO 100 n 106 C PRO 100 A SER 100 n 107 D SER 100 A PRO 100 n 108 E PRO 100 A LEU 100 n 109 F LEU 100 A ASP 101 n 110 ASP 101 A VAL 102 n 111 VAL 102 A TRP 103 n 112 TRP 103 A GLY 104 n 113 GLY 104 A ARG 105 n 114 ARG 105 A GLY 106 n 115 GLY 106 A THR 107 n 116 THR 107 A GLN 108 n 117 GLN 108 A VAL 109 n 118 VAL 109 A THR 110 n 119 THR 110 A VAL 111 n 120 VAL 111 A SER 112 n 121 SER 112 A SER 113 n 122 SER 113 A author_and_software_defined_assembly PISA 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N SER 7 A N SER 7 A O SER 21 A O SER 21 A N CYS 22 A N CYS 22 A O VAL 78 A O VAL 78 A N GLN 81 A N GLN 81 A O THR 68 A O THR 68 A N GLY 10 A N GLY 10 A O GLN 108 A O GLN 117 A N VAL 109 A N VAL 118 A O ALA 88 A O ALA 91 A N SER 96 A N SER 99 F A O LEU 100 A O LEU 109 A N GLY 10 A N GLY 10 A O GLN 108 A O GLN 117 A N VAL 109 A N VAL 118 A O ALA 88 A O ALA 91 A N GLU 95 A N GLU 98 A O VAL 33 A O VAL 33 A N ARG 38 A N ARG 38 A O GLU 46 A O GLU 46 A N PHE 50 A N PHE 50 A O ASN 58 A O ASN 58 A N VAL 102 A N VAL 111 A O ALA 94 A O ALA 97 1 A HOH 2032 B HOH 1 A N VAL 12 C A N VAL 12 0 Y 1 A CA VAL 12 C A CA VAL 12 0 Y 1 A C VAL 12 C A C VAL 12 0 Y 1 A O VAL 12 C A O VAL 12 0 Y 1 A CB VAL 12 C A CB VAL 12 0 Y 1 A CG1 VAL 12 C A CG1 VAL 12 0 Y 1 A CG2 VAL 12 C A CG2 VAL 12 0 Y 1 A N LEU 47 B A N LEU 47 0 Y 1 A CA LEU 47 B A CA LEU 47 0 Y 1 A C LEU 47 B A C LEU 47 0 Y 1 A O LEU 47 B A O LEU 47 0 Y 1 A CB LEU 47 B A CB LEU 47 0 Y 1 A CG LEU 47 B A CG LEU 47 0 Y 1 A CD1 LEU 47 B A CD1 LEU 47 0 Y 1 A CD2 LEU 47 B A CD2 LEU 47 0 Y 1 A ALA 88 178.06 166.04 1 A ALA 88 178.06 169.76 20.105 0.968 0.956 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT. U VALUES REFINED INDIVIDUALLY 0.17963 0.14502 0.14680 1.30 63.60 1499 28043 5.1 98.94 RANDOM 1 THROUGHOUT MOLECULAR REPLACEMENT 0.051 0.050 0.80 0.80 1.20 PDB ENTRY 3EZJ MAXIMUM LIKELIHOOD MASK 1.30 63.60 172 1107 0 0 935 0.008 0.019 1081 1.160 1.957 1494 5.927 5.000 152 31.444 23.095 42 12.327 15.000 182 14.196 15.000 10 0.075 0.200 165 0.004 0.021 854 29.368 3.000 1081 0.000 5.000 172 17.611 5.000 1048 0.188 0.159 1.334 107 2091 20 100.00 1.30 25.00 4B50 28043 2.2 0.07 1 6.10 13.9 99.0 0.30 1.30 1.37 2.20 1 14.2 100.0 refinement REFMAC 5.6.0116 data reduction MOSFLM data scaling SCALA phasing PHASER Crystal structure of the HIV-1 gp41 MPER-specific llama VHH 2H10 1 N N 2 N N A VAL 61 A VAL 61 HELX_P A VAL 63 A VAL 63 5 1 3 A LYS 83 A LYS 86 HELX_P A THR 87 A THR 90 5 2 5 disulf 2.035 A A A CYS 22 A SG CYS 22 1_555 A CYS 92 A SG CYS 95 1_555 disulf 2.035 B B A CYS 22 A SG CYS 22 1_555 A CYS 92 A SG CYS 95 1_555 IMMUNE SYSTEM IMMUNE SYSTEM, NEUTRALIZING ANTIBODY 4B50 PDB 1 4B50 1 113 4B50 1 113 4B50 A 1 1 122 4 4 6 2 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A LEU 4 A LEU 4 A SER 7 A SER 7 A LEU 18 A LEU 18 A ALA 24 A ALA 24 A MET 77 A MET 77 A MET 82 A MET 82 A PHE 67 A PHE 67 A ASP 72 A ASP 72 A GLY 10 A GLY 10 A VAL 12 A VAL 12 A THR 107 A THR 116 A VAL 111 A VAL 120 A ALA 88 A ALA 91 A SER 96 A SER 99 A LEU 100 A LEU 109 A TRP 103 A TRP 112 F A GLY 10 A GLY 10 A VAL 12 A VAL 12 A THR 107 A THR 116 A VAL 111 A VAL 120 A ALA 88 A ALA 91 A SER 96 A SER 99 A VAL 33 A VAL 33 A GLN 39 A GLN 39 A GLU 46 A GLU 46 A THR 52 A THR 52 A THR 57 A THR 57 A TYR 59 A TYR 59 A LEU 100 A LEU 109 A TRP 103 A TRP 112 F A ALA 88 A ALA 91 A SER 96 A SER 99 197 I 2 3