0.024426
0.000000
0.000000
0.000000
0.010175
0.000000
0.000000
0.000000
0.008093
0.00000
0.00000
0.00000
Villa, R.
Martorana, A.M.
Sperandeo, P.
Kahne, D.
Okuda, S.
Gourlay, L.J.
Nardini, M.
Bolognesi, M.
Polissi, A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
40.940
98.280
123.560
C2 H3 O2 -1
59.044
ACETATE ION
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
C
N
2
N
O
N
3
N
O
N
4
N
C
N
5
N
H
N
6
N
H
N
7
N
H
N
8
N
N
N
9
S
C
N
10
N
C
N
11
N
O
N
12
N
C
N
13
N
O
N
14
N
H
N
15
N
H
N
16
N
H
N
17
N
H
N
18
N
H
N
19
N
H
N
20
N
H
N
21
N
N
N
22
S
C
N
23
N
C
N
24
N
O
N
25
N
C
N
26
N
C
N
27
N
C
N
28
N
N
N
29
N
C
N
30
N
N
N
31
N
N
N
32
N
O
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
N
N
49
S
C
N
50
N
C
N
51
N
O
N
52
N
C
N
53
N
C
N
54
N
O
N
55
N
N
N
56
N
O
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
N
N
66
S
C
N
67
N
C
N
68
N
O
N
69
N
C
N
70
N
C
N
71
N
O
N
72
N
O
N
73
N
O
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
N
N
82
S
C
N
83
N
C
N
84
N
O
N
85
N
C
N
86
N
C
N
87
N
C
N
88
N
O
N
89
N
N
N
90
N
O
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
N
N
102
S
C
N
103
N
C
N
104
N
O
N
105
N
C
N
106
N
C
N
107
N
C
N
108
N
O
N
109
N
O
N
110
N
O
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
N
N
121
N
C
N
122
N
C
N
123
N
O
N
124
N
O
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
N
N
131
S
C
N
132
N
C
N
133
N
O
N
134
N
C
Y
135
N
C
Y
136
N
N
Y
137
N
C
Y
138
N
C
Y
139
N
N
N
140
N
O
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
O
N
152
N
H
N
153
N
H
N
154
N
N
N
155
S
C
N
156
N
C
N
157
N
O
N
158
S
C
N
159
N
C
N
160
N
C
N
161
N
C
N
162
N
O
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
N
N
177
S
C
N
178
N
C
N
179
N
O
N
180
N
C
N
181
N
C
N
182
N
C
N
183
N
C
N
184
N
O
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
N
N
199
S
C
N
200
N
C
N
201
N
O
N
202
N
C
N
203
N
C
N
204
N
C
N
205
N
C
N
206
N
N
N
207
N
O
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
N
N
224
S
C
N
225
N
C
N
226
N
O
N
227
N
C
N
228
N
C
N
229
N
S
N
230
N
C
N
231
N
O
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
N
N
244
S
C
N
245
N
C
N
246
N
O
N
247
N
C
Y
248
N
C
Y
249
N
C
Y
250
N
C
Y
251
N
C
Y
252
N
C
Y
253
N
C
N
254
N
O
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
N
N
267
S
C
N
268
N
C
N
269
N
O
N
270
N
C
N
271
N
C
N
272
N
C
N
273
N
O
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
N
N
284
S
C
N
285
N
C
N
286
N
O
N
287
N
C
N
288
N
O
N
289
N
O
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
N
N
298
S
C
N
299
N
C
N
300
N
O
N
301
R
C
N
302
N
O
N
303
N
C
N
304
N
O
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
N
N
315
S
C
N
316
N
C
N
317
N
O
N
318
N
C
Y
319
N
C
Y
320
N
C
Y
321
N
C
Y
322
N
N
Y
323
N
C
Y
324
N
C
Y
325
N
C
Y
326
N
C
Y
327
N
C
N
328
N
O
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
N
N
342
S
C
N
343
N
C
N
344
N
O
N
345
N
C
Y
346
N
C
Y
347
N
C
Y
348
N
C
Y
349
N
C
Y
350
N
C
Y
351
N
C
N
352
N
O
N
353
N
O
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
N
N
366
S
C
N
367
N
C
N
368
N
O
N
369
N
C
N
370
N
C
N
371
N
C
N
372
N
O
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
1
N
doub
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
doub
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
doub
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
doub
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
doub
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
doub
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
doub
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
doub
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
doub
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
doub
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
doub
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
doub
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
doub
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
doub
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
Y
133
N
sing
Y
134
N
doub
Y
135
N
doub
N
136
N
sing
Y
137
N
sing
N
138
N
sing
Y
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
doub
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
doub
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
doub
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
doub
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
doub
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
Y
241
N
doub
Y
242
N
sing
Y
243
N
sing
N
244
N
sing
Y
245
N
doub
N
246
N
sing
Y
247
N
doub
N
248
N
sing
Y
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
doub
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
doub
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
doub
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
doub
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
Y
310
N
doub
Y
311
N
sing
Y
312
N
sing
N
313
N
sing
Y
314
N
doub
Y
315
N
sing
Y
316
N
sing
N
317
N
sing
Y
318
N
sing
Y
319
N
doub
N
320
N
sing
Y
321
N
doub
N
322
N
sing
Y
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
doub
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
Y
338
N
doub
Y
339
N
sing
Y
340
N
sing
N
341
N
sing
Y
342
N
doub
N
343
N
sing
Y
344
N
doub
N
345
N
sing
Y
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
doub
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
US
J.Bacteriol.
JOBAAY
0767
0021-9193
195
1100
10.1128/JB.02057-12
23292770
The Escherichia Coli Lpt Transenvelope Protein Complex for Lipopolysaccharide Export is Assembled Via Conserved Structurally Homologous Domains.
2013
10.2210/pdb4b54/pdb
pdb_00004b54
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
PIXEL
2010-07-28
DECTRIS PILATUS 6M
SINGLE WAVELENGTH
M
x-ray
1
1
1.0
ID29
ESRF
1
SYNCHROTRON
ESRF BEAMLINE ID29
20231.459
LIPOPOLYSACCHARIDE EXPORT SYSTEM PROTEIN LPTC
PERIPLASMIC DOMAIN, RESIDUES 21-191
YES
2
man
polymer
59.044
ACETATE ION
1
syn
non-polymer
18.015
water
11
nat
water
LIPOSACCHARIDE TRANSPORT PROTEIN C
no
no
HHHHHHGSMAEKDDTAQVVVNNNDPTYKSEHTDTLVYNPEGALSYRLIAQHVEYYSDQAVSWFTQPVLTTFDKDKIPTWS
VKADKAKLTNDRMLYLYGHVEVNALVPDSQLRRITTDNAQINLVTQDVTSEDLVTLYRTTFNSSGLKMRGNLRSKNAELI
EKVRTSYEIQNKQTQP
HHHHHHGSMAEKDDTAQVVVNNNDPTYKSEHTDTLVYNPEGALSYRLIAQHVEYYSDQAVSWFTQPVLTTFDKDKIPTWS
VKADKAKLTNDRMLYLYGHVEVNALVPDSQLRRITTDNAQINLVTQDVTSEDLVTLYRTTFNSSGLKMRGNLRSKNAELI
EKVRTSYEIQNKQTQP
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
562
ESCHERICHIA COLI
469008
ESCHERICHIA COLI
BL21(DE3)
PLYSS
PQESH
PLASMID
1
2.3
52.5
NONE
5.5
STURA FOOTPRINT SCREEN NUMBER 1 CONDITION 18.2 (MOLECULAR DIMENSIONS) 18% PEG5K MME, 0.1M SODIUM ACETATE PH 5.5 PLUS 30% GLYCEROL FOR CRYOCOOLING
chem_comp_atom
chem_comp_bond
database_2
pdbx_database_status
pdbx_initial_refinement_model
struct_sheet
struct_site
repository
Initial release
Database references
Data collection
Database references
Derived calculations
Other
Refinement description
1
0
2013-01-16
1
1
2013-02-20
1
2
2023-12-20
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.status_code_sf
_struct_sheet.number_strands
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
SHEET
THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN
ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW,
TWO SHEETS ARE DEFINED.
PDBE
Y
PDBE
2012-08-02
REL
REL
ACT
ACETATE ION
HOH
water
3MY2
PDB ENTRY 3MY2
PDB
experimental model
ACT
1183
2
ACT
ACT
1183
A
HOH
2001
3
HOH
HOH
2001
A
HOH
2002
3
HOH
HOH
2002
A
HOH
2003
3
HOH
HOH
2003
A
HOH
2004
3
HOH
HOH
2004
A
HOH
2005
3
HOH
HOH
2005
A
HOH
2006
3
HOH
HOH
2006
A
HOH
2007
3
HOH
HOH
2007
A
HOH
2001
3
HOH
HOH
2001
B
HOH
2002
3
HOH
HOH
2002
B
HOH
2003
3
HOH
HOH
2003
B
HOH
2004
3
HOH
HOH
2004
B
n
1
16
A
n
2
17
A
n
3
18
A
n
4
19
A
n
5
20
A
n
6
21
A
n
7
22
A
n
8
23
A
n
9
24
A
n
10
25
A
n
11
26
A
n
12
27
A
n
13
28
A
n
14
29
A
n
15
30
A
n
16
31
A
n
17
32
A
n
18
33
A
n
19
34
A
n
20
35
A
n
21
36
A
n
22
37
A
n
23
38
A
n
24
39
A
n
25
40
A
n
26
41
A
n
27
42
A
n
28
43
A
n
29
44
A
n
30
45
A
n
31
46
A
n
32
47
A
n
33
48
A
n
34
49
A
n
35
50
A
n
36
51
A
n
37
52
A
n
38
53
A
n
39
54
A
n
40
55
A
n
41
56
A
n
42
57
A
LEU
58
n
43
LEU
58
A
SER
59
n
44
SER
59
A
TYR
60
n
45
TYR
60
A
ARG
61
n
46
ARG
61
A
LEU
62
n
47
LEU
62
A
ILE
63
n
48
ILE
63
A
ALA
64
n
49
ALA
64
A
GLN
65
n
50
GLN
65
A
HIS
66
n
51
HIS
66
A
VAL
67
n
52
VAL
67
A
GLU
68
n
53
GLU
68
A
TYR
69
n
54
TYR
69
A
TYR
70
n
55
TYR
70
A
SER
71
n
56
SER
71
A
ASP
72
n
57
ASP
72
A
GLN
73
n
58
GLN
73
A
ALA
74
n
59
ALA
74
A
VAL
75
n
60
VAL
75
A
SER
76
n
61
SER
76
A
TRP
77
n
62
TRP
77
A
PHE
78
n
63
PHE
78
A
THR
79
n
64
THR
79
A
GLN
80
n
65
GLN
80
A
PRO
81
n
66
PRO
81
A
VAL
82
n
67
VAL
82
A
LEU
83
n
68
LEU
83
A
THR
84
n
69
THR
84
A
THR
85
n
70
THR
85
A
PHE
86
n
71
PHE
86
A
ASP
87
n
72
ASP
87
A
LYS
88
n
73
LYS
88
A
ASP
89
n
74
ASP
89
A
LYS
90
n
75
LYS
90
A
ILE
91
n
76
ILE
91
A
PRO
92
n
77
PRO
92
A
THR
93
n
78
THR
93
A
TRP
94
n
79
TRP
94
A
SER
95
n
80
SER
95
A
VAL
96
n
81
VAL
96
A
LYS
97
n
82
LYS
97
A
ALA
98
n
83
ALA
98
A
ASP
99
n
84
ASP
99
A
LYS
100
n
85
LYS
100
A
ALA
101
n
86
ALA
101
A
LYS
102
n
87
LYS
102
A
LEU
103
n
88
LEU
103
A
THR
104
n
89
THR
104
A
ASN
105
n
90
ASN
105
A
ASP
106
n
91
ASP
106
A
ARG
107
n
92
ARG
107
A
MET
108
n
93
MET
108
A
LEU
109
n
94
LEU
109
A
TYR
110
n
95
TYR
110
A
LEU
111
n
96
LEU
111
A
TYR
112
n
97
TYR
112
A
GLY
113
n
98
GLY
113
A
HIS
114
n
99
HIS
114
A
VAL
115
n
100
VAL
115
A
GLU
116
n
101
GLU
116
A
VAL
117
n
102
VAL
117
A
ASN
118
n
103
ASN
118
A
ALA
119
n
104
ALA
119
A
LEU
120
n
105
LEU
120
A
VAL
121
n
106
VAL
121
A
PRO
122
n
107
PRO
122
A
ASP
123
n
108
ASP
123
A
SER
124
n
109
SER
124
A
GLN
125
n
110
GLN
125
A
LEU
126
n
111
LEU
126
A
ARG
127
n
112
ARG
127
A
ARG
128
n
113
ARG
128
A
ILE
129
n
114
ILE
129
A
THR
130
n
115
THR
130
A
THR
131
n
116
THR
131
A
ASP
132
n
117
ASP
132
A
ASN
133
n
118
ASN
133
A
ALA
134
n
119
ALA
134
A
GLN
135
n
120
GLN
135
A
ILE
136
n
121
ILE
136
A
ASN
137
n
122
ASN
137
A
LEU
138
n
123
LEU
138
A
VAL
139
n
124
VAL
139
A
THR
140
n
125
THR
140
A
GLN
141
n
126
GLN
141
A
ASP
142
n
127
ASP
142
A
VAL
143
n
128
VAL
143
A
THR
144
n
129
THR
144
A
SER
145
n
130
SER
145
A
GLU
146
n
131
GLU
146
A
ASP
147
n
132
ASP
147
A
LEU
148
n
133
LEU
148
A
VAL
149
n
134
VAL
149
A
THR
150
n
135
THR
150
A
LEU
151
n
136
LEU
151
A
TYR
152
n
137
TYR
152
A
ARG
153
n
138
ARG
153
A
THR
154
n
139
THR
154
A
THR
155
n
140
THR
155
A
PHE
156
n
141
PHE
156
A
ASN
157
n
142
ASN
157
A
SER
158
n
143
SER
158
A
SER
159
n
144
SER
159
A
GLY
160
n
145
GLY
160
A
LEU
161
n
146
LEU
161
A
LYS
162
n
147
LYS
162
A
MET
163
n
148
MET
163
A
ARG
164
n
149
ARG
164
A
GLY
165
n
150
GLY
165
A
ASN
166
n
151
ASN
166
A
LEU
167
n
152
LEU
167
A
ARG
168
n
153
ARG
168
A
SER
169
n
154
SER
169
A
LYS
170
n
155
LYS
170
A
ASN
171
n
156
ASN
171
A
ALA
172
n
157
ALA
172
A
GLU
173
n
158
GLU
173
A
LEU
174
n
159
LEU
174
A
ILE
175
n
160
ILE
175
A
GLU
176
n
161
GLU
176
A
LYS
177
n
162
LYS
177
A
VAL
178
n
163
VAL
178
A
ARG
179
n
164
ARG
179
A
THR
180
n
165
THR
180
A
SER
181
n
166
SER
181
A
TYR
182
n
167
TYR
182
A
n
168
183
A
n
169
184
A
n
170
185
A
n
171
186
A
n
172
187
A
n
173
188
A
n
174
189
A
n
175
190
A
n
176
191
A
n
1
16
B
n
2
17
B
n
3
18
B
n
4
19
B
n
5
20
B
n
6
21
B
n
7
22
B
n
8
23
B
n
9
24
B
n
10
25
B
n
11
26
B
n
12
27
B
n
13
28
B
n
14
29
B
n
15
30
B
n
16
31
B
n
17
32
B
n
18
33
B
n
19
34
B
n
20
35
B
n
21
36
B
n
22
37
B
n
23
38
B
n
24
39
B
n
25
40
B
n
26
41
B
n
27
42
B
n
28
43
B
n
29
44
B
n
30
45
B
n
31
46
B
n
32
47
B
n
33
48
B
n
34
49
B
n
35
50
B
n
36
51
B
n
37
52
B
n
38
53
B
n
39
54
B
n
40
55
B
n
41
56
B
n
42
57
B
n
43
58
B
SER
59
n
44
SER
59
B
TYR
60
n
45
TYR
60
B
ARG
61
n
46
ARG
61
B
LEU
62
n
47
LEU
62
B
ILE
63
n
48
ILE
63
B
ALA
64
n
49
ALA
64
B
GLN
65
n
50
GLN
65
B
HIS
66
n
51
HIS
66
B
VAL
67
n
52
VAL
67
B
GLU
68
n
53
GLU
68
B
TYR
69
n
54
TYR
69
B
TYR
70
n
55
TYR
70
B
SER
71
n
56
SER
71
B
ASP
72
n
57
ASP
72
B
GLN
73
n
58
GLN
73
B
ALA
74
n
59
ALA
74
B
VAL
75
n
60
VAL
75
B
SER
76
n
61
SER
76
B
TRP
77
n
62
TRP
77
B
PHE
78
n
63
PHE
78
B
THR
79
n
64
THR
79
B
GLN
80
n
65
GLN
80
B
PRO
81
n
66
PRO
81
B
VAL
82
n
67
VAL
82
B
LEU
83
n
68
LEU
83
B
THR
84
n
69
THR
84
B
THR
85
n
70
THR
85
B
PHE
86
n
71
PHE
86
B
ASP
87
n
72
ASP
87
B
LYS
88
n
73
LYS
88
B
ASP
89
n
74
ASP
89
B
LYS
90
n
75
LYS
90
B
ILE
91
n
76
ILE
91
B
PRO
92
n
77
PRO
92
B
THR
93
n
78
THR
93
B
TRP
94
n
79
TRP
94
B
SER
95
n
80
SER
95
B
VAL
96
n
81
VAL
96
B
LYS
97
n
82
LYS
97
B
ALA
98
n
83
ALA
98
B
ASP
99
n
84
ASP
99
B
LYS
100
n
85
LYS
100
B
ALA
101
n
86
ALA
101
B
LYS
102
n
87
LYS
102
B
LEU
103
n
88
LEU
103
B
THR
104
n
89
THR
104
B
ASN
105
n
90
ASN
105
B
ASP
106
n
91
ASP
106
B
ARG
107
n
92
ARG
107
B
MET
108
n
93
MET
108
B
LEU
109
n
94
LEU
109
B
TYR
110
n
95
TYR
110
B
LEU
111
n
96
LEU
111
B
TYR
112
n
97
TYR
112
B
GLY
113
n
98
GLY
113
B
HIS
114
n
99
HIS
114
B
VAL
115
n
100
VAL
115
B
GLU
116
n
101
GLU
116
B
VAL
117
n
102
VAL
117
B
ASN
118
n
103
ASN
118
B
ALA
119
n
104
ALA
119
B
LEU
120
n
105
LEU
120
B
VAL
121
n
106
VAL
121
B
PRO
122
n
107
PRO
122
B
ASP
123
n
108
ASP
123
B
SER
124
n
109
SER
124
B
GLN
125
n
110
GLN
125
B
LEU
126
n
111
LEU
126
B
ARG
127
n
112
ARG
127
B
ARG
128
n
113
ARG
128
B
ILE
129
n
114
ILE
129
B
THR
130
n
115
THR
130
B
THR
131
n
116
THR
131
B
ASP
132
n
117
ASP
132
B
ASN
133
n
118
ASN
133
B
ALA
134
n
119
ALA
134
B
GLN
135
n
120
GLN
135
B
ILE
136
n
121
ILE
136
B
ASN
137
n
122
ASN
137
B
LEU
138
n
123
LEU
138
B
VAL
139
n
124
VAL
139
B
THR
140
n
125
THR
140
B
GLN
141
n
126
GLN
141
B
ASP
142
n
127
ASP
142
B
VAL
143
n
128
VAL
143
B
THR
144
n
129
THR
144
B
SER
145
n
130
SER
145
B
GLU
146
n
131
GLU
146
B
ASP
147
n
132
ASP
147
B
LEU
148
n
133
LEU
148
B
VAL
149
n
134
VAL
149
B
THR
150
n
135
THR
150
B
LEU
151
n
136
LEU
151
B
TYR
152
n
137
TYR
152
B
ARG
153
n
138
ARG
153
B
THR
154
n
139
THR
154
B
THR
155
n
140
THR
155
B
PHE
156
n
141
PHE
156
B
ASN
157
n
142
ASN
157
B
SER
158
n
143
SER
158
B
SER
159
n
144
SER
159
B
GLY
160
n
145
GLY
160
B
LEU
161
n
146
LEU
161
B
LYS
162
n
147
LYS
162
B
MET
163
n
148
MET
163
B
ARG
164
n
149
ARG
164
B
GLY
165
n
150
GLY
165
B
ASN
166
n
151
ASN
166
B
LEU
167
n
152
LEU
167
B
ARG
168
n
153
ARG
168
B
SER
169
n
154
SER
169
B
LYS
170
n
155
LYS
170
B
ASN
171
n
156
ASN
171
B
ALA
172
n
157
ALA
172
B
GLU
173
n
158
GLU
173
B
LEU
174
n
159
LEU
174
B
ILE
175
n
160
ILE
175
B
GLU
176
n
161
GLU
176
B
LYS
177
n
162
LYS
177
B
VAL
178
n
163
VAL
178
B
ARG
179
n
164
ARG
179
B
THR
180
n
165
THR
180
B
SER
181
n
166
SER
181
B
TYR
182
n
167
TYR
182
B
GLU
183
n
168
GLU
183
B
n
169
184
B
n
170
185
B
n
171
186
B
n
172
187
B
n
173
188
B
n
174
189
B
n
175
190
B
n
176
191
B
2.3020
-1.0496
0.9384
4.5796
-0.7680
4.4424
-0.0379
0.1094
-0.0366
-0.2527
-0.0060
-0.1421
0.1420
-0.0119
0.0439
0.0352
-0.0383
0.0170
0.0895
-0.0097
0.0414
refined
11.4775
-22.8043
-13.4486
X-RAY DIFFRACTION
1.8921
-3.1274
1.8452
7.6808
-4.6670
3.1322
0.0104
-0.2335
-0.1572
-0.0711
0.2426
0.1698
0.1897
-0.3099
-0.2530
0.1908
-0.0073
-0.0548
0.2336
0.0801
0.1721
refined
-7.2442
5.0800
-27.2834
X-RAY DIFFRACTION
A
58
A
182
X-RAY DIFFRACTION
1
B
59
B
183
X-RAY DIFFRACTION
2
author_and_software_defined_assembly
PISA
2
dimeric
1590
-6.2
13730
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ARG
179
A
N
ARG
164
A
O
SER
159
A
O
SER
144
A
N
GLY
165
A
N
GLY
150
A
O
VAL
143
A
O
VAL
128
A
O
TYR
152
A
O
TYR
137
A
N
ARG
127
A
N
ARG
112
A
N
ILE
136
A
N
ILE
121
A
O
LEU
109
A
O
LEU
94
A
N
ASN
118
A
N
ASN
103
A
O
SER
95
A
O
SER
80
A
N
VAL
96
A
N
VAL
81
A
O
LEU
83
A
O
LEU
68
A
N
THR
84
A
N
THR
69
A
O
ARG
61
A
O
ARG
46
A
O
THR
79
A
O
THR
64
A
N
GLN
65
A
N
GLN
50
1
A
HIS
16
A
HIS
1
1
Y
1
A
HIS
17
A
HIS
2
1
Y
1
A
HIS
18
A
HIS
3
1
Y
1
A
HIS
19
A
HIS
4
1
Y
1
A
HIS
20
A
HIS
5
1
Y
1
A
HIS
21
A
HIS
6
1
Y
1
A
GLY
22
A
GLY
7
1
Y
1
A
SER
23
A
SER
8
1
Y
1
A
MET
24
A
MET
9
1
Y
1
A
ALA
25
A
ALA
10
1
Y
1
A
GLU
26
A
GLU
11
1
Y
1
A
LYS
27
A
LYS
12
1
Y
1
A
ASP
28
A
ASP
13
1
Y
1
A
ASP
29
A
ASP
14
1
Y
1
A
THR
30
A
THR
15
1
Y
1
A
ALA
31
A
ALA
16
1
Y
1
A
GLN
32
A
GLN
17
1
Y
1
A
VAL
33
A
VAL
18
1
Y
1
A
VAL
34
A
VAL
19
1
Y
1
A
VAL
35
A
VAL
20
1
Y
1
A
ASN
36
A
ASN
21
1
Y
1
A
ASN
37
A
ASN
22
1
Y
1
A
ASN
38
A
ASN
23
1
Y
1
A
ASP
39
A
ASP
24
1
Y
1
A
PRO
40
A
PRO
25
1
Y
1
A
THR
41
A
THR
26
1
Y
1
A
TYR
42
A
TYR
27
1
Y
1
A
LYS
43
A
LYS
28
1
Y
1
A
SER
44
A
SER
29
1
Y
1
A
GLU
45
A
GLU
30
1
Y
1
A
HIS
46
A
HIS
31
1
Y
1
A
THR
47
A
THR
32
1
Y
1
A
ASP
48
A
ASP
33
1
Y
1
A
THR
49
A
THR
34
1
Y
1
A
LEU
50
A
LEU
35
1
Y
1
A
VAL
51
A
VAL
36
1
Y
1
A
TYR
52
A
TYR
37
1
Y
1
A
ASN
53
A
ASN
38
1
Y
1
A
PRO
54
A
PRO
39
1
Y
1
A
GLU
55
A
GLU
40
1
Y
1
A
GLY
56
A
GLY
41
1
Y
1
A
ALA
57
A
ALA
42
1
Y
1
A
GLU
183
A
GLU
168
1
Y
1
A
ILE
184
A
ILE
169
1
Y
1
A
GLN
185
A
GLN
170
1
Y
1
A
ASN
186
A
ASN
171
1
Y
1
A
LYS
187
A
LYS
172
1
Y
1
A
GLN
188
A
GLN
173
1
Y
1
A
THR
189
A
THR
174
1
Y
1
A
GLN
190
A
GLN
175
1
Y
1
A
PRO
191
A
PRO
176
1
Y
1
B
HIS
16
B
HIS
1
1
Y
1
B
HIS
17
B
HIS
2
1
Y
1
B
HIS
18
B
HIS
3
1
Y
1
B
HIS
19
B
HIS
4
1
Y
1
B
HIS
20
B
HIS
5
1
Y
1
B
HIS
21
B
HIS
6
1
Y
1
B
GLY
22
B
GLY
7
1
Y
1
B
SER
23
B
SER
8
1
Y
1
B
MET
24
B
MET
9
1
Y
1
B
ALA
25
B
ALA
10
1
Y
1
B
GLU
26
B
GLU
11
1
Y
1
B
LYS
27
B
LYS
12
1
Y
1
B
ASP
28
B
ASP
13
1
Y
1
B
ASP
29
B
ASP
14
1
Y
1
B
THR
30
B
THR
15
1
Y
1
B
ALA
31
B
ALA
16
1
Y
1
B
GLN
32
B
GLN
17
1
Y
1
B
VAL
33
B
VAL
18
1
Y
1
B
VAL
34
B
VAL
19
1
Y
1
B
VAL
35
B
VAL
20
1
Y
1
B
ASN
36
B
ASN
21
1
Y
1
B
ASN
37
B
ASN
22
1
Y
1
B
ASN
38
B
ASN
23
1
Y
1
B
ASP
39
B
ASP
24
1
Y
1
B
PRO
40
B
PRO
25
1
Y
1
B
THR
41
B
THR
26
1
Y
1
B
TYR
42
B
TYR
27
1
Y
1
B
LYS
43
B
LYS
28
1
Y
1
B
SER
44
B
SER
29
1
Y
1
B
GLU
45
B
GLU
30
1
Y
1
B
HIS
46
B
HIS
31
1
Y
1
B
THR
47
B
THR
32
1
Y
1
B
ASP
48
B
ASP
33
1
Y
1
B
THR
49
B
THR
34
1
Y
1
B
LEU
50
B
LEU
35
1
Y
1
B
VAL
51
B
VAL
36
1
Y
1
B
TYR
52
B
TYR
37
1
Y
1
B
ASN
53
B
ASN
38
1
Y
1
B
PRO
54
B
PRO
39
1
Y
1
B
GLU
55
B
GLU
40
1
Y
1
B
GLY
56
B
GLY
41
1
Y
1
B
ALA
57
B
ALA
42
1
Y
1
B
LEU
58
B
LEU
43
1
Y
1
B
ILE
184
B
ILE
169
1
Y
1
B
GLN
185
B
GLN
170
1
Y
1
B
ASN
186
B
ASN
171
1
Y
1
B
LYS
187
B
LYS
172
1
Y
1
B
GLN
188
B
GLN
173
1
Y
1
B
THR
189
B
THR
174
1
Y
1
B
GLN
190
B
GLN
175
1
Y
1
B
PRO
191
B
PRO
176
1
Y
1
18.18
2.00
110.40
128.58
B
B
B
CB
CA
C
GLN
GLN
GLN
65
65
65
N
1
-23.57
2.70
111.00
87.43
B
B
B
N
CA
C
GLN
GLN
GLN
65
65
65
N
1
19.60
2.00
110.40
130.00
B
B
B
CB
CA
C
HIS
HIS
HIS
66
66
66
N
1
A
SER
124
-171.15
126.80
1
A
THR
155
-72.81
-74.67
1
A
LYS
162
77.83
158.46
1
B
HIS
66
76.84
154.53
1
B
ASP
87
-89.82
-157.96
1
B
ASP
123
-92.32
56.54
1
B
LYS
162
69.91
154.34
1
B
SER
181
-68.15
0.30
60.040
2.35
0.00
0.00
-1.61
0.00
-0.74
0.919
0.917
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.
0.26551
0.24035
0.24155
2.80
40.00
621
12169
4.9
99.12
32.573
0.267
RANDOM
1
THROUGHOUT
MOLECULAR REPLACEMENT
0.494
0.311
0.80
0.80
1.40
PDB ENTRY 3MY2
MAXIMUM LIKELIHOOD
MASK
2.80
40.00
11
2048
4
0
2033
0.006
0.022
2072
0.914
1.952
2812
4.816
5.000
248
37.496
23.939
99
15.009
15.000
372
18.198
15.000
16
0.064
0.200
329
0.002
0.020
1538
0.563
3.000
1251
1.014
4.000
2040
0.492
3.000
821
0.812
4.000
772
0.523
0.427
2.872
46
885
20
98.94
2.80
40.00
4B54
12846
2.0
0.12
1
12.90
5.1
99.5
0.72
2.80
2.95
3.20
1
5.4
99.4
refinement
REFMAC
5.5.0109
data reduction
XDS
data scaling
SCALA
phasing
MOLREP
The Structure of the inactive mutant G153R of LptC from E. coli
1
N
N
1
N
N
2
N
N
3
N
N
3
N
N
TRANSPORT PROTEIN
TRANSPORT PROTEIN, INACTIVE MUTANT
I2Z3T4_ECOLX
UNP
1
I2Z3T4
24
191
4B54
24
191
I2Z3T4
A
1
9
176
24
191
4B54
24
191
I2Z3T4
B
1
9
176
1
expression tag
HIS
16
4B54
A
I2Z3T4
UNP
1
1
expression tag
HIS
17
4B54
A
I2Z3T4
UNP
2
1
expression tag
HIS
18
4B54
A
I2Z3T4
UNP
3
1
expression tag
HIS
19
4B54
A
I2Z3T4
UNP
4
1
expression tag
HIS
20
4B54
A
I2Z3T4
UNP
5
1
expression tag
HIS
21
4B54
A
I2Z3T4
UNP
6
1
expression tag
GLY
22
4B54
A
I2Z3T4
UNP
7
1
expression tag
SER
23
4B54
A
I2Z3T4
UNP
8
1
GLY
engineered mutation
ARG
153
4B54
A
I2Z3T4
UNP
153
138
2
expression tag
HIS
16
4B54
B
I2Z3T4
UNP
1
2
expression tag
HIS
17
4B54
B
I2Z3T4
UNP
2
2
expression tag
HIS
18
4B54
B
I2Z3T4
UNP
3
2
expression tag
HIS
19
4B54
B
I2Z3T4
UNP
4
2
expression tag
HIS
20
4B54
B
I2Z3T4
UNP
5
2
expression tag
HIS
21
4B54
B
I2Z3T4
UNP
6
2
expression tag
GLY
22
4B54
B
I2Z3T4
UNP
7
2
expression tag
SER
23
4B54
B
I2Z3T4
UNP
8
2
GLY
engineered mutation
ARG
153
4B54
B
I2Z3T4
UNP
153
138
8
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ASN
171
A
ASN
156
A
THR
180
A
THR
165
A
SER
158
A
SER
143
A
ASN
166
A
ASN
151
A
ASP
142
A
ASP
127
A
ARG
153
A
ARG
138
A
LEU
126
A
LEU
111
A
ASN
137
A
ASN
122
A
MET
108
A
MET
93
A
ALA
119
A
ALA
104
A
PRO
92
A
PRO
77
A
LYS
97
A
LYS
82
A
VAL
82
A
VAL
67
A
PHE
86
A
PHE
71
A
TYR
60
A
TYR
45
A
TYR
70
A
TYR
55
A
ASN
171
A
ASN
156
A
THR
180
A
THR
165
A
TYR
60
A
TYR
45
A
TYR
70
A
TYR
55
BINDING SITE FOR RESIDUE ACT A 1183
A
ACT
1183
Software
3
A
LEU
120
A
LEU
105
3
4_545
A
SER
159
A
SER
144
3
1_555
A
ARG
179
A
ARG
164
3
1_555
19
P 21 21 21