0.023012
0.000000
0.000000
0.000000
0.012158
0.000000
0.000000
0.000000
0.005210
0.00000
0.00000
0.00000
Tucker, J.A.
Shirude, P.S.
Madhavapeddi, P.
Hussein, S.
Basu, R.
Ghorpade, S.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
16
90.00
90.00
90.00
43.455
82.251
191.941
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C27 H34 N6 O2
474.598
6-(3,4-dimethylphenyl)-3-[[4-[3-(4-methylpiperazin-1-yl)propoxy]phenyl]amino]pyrazine-2-carboxamide
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Na 1
22.990
SODIUM ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
ACS Chem. Biol.
1554-8937
8
519
523
10.1021/cb300510w
23268609
Aminopyrazinamides: novel and specific GyrB inhibitors that kill replicating and nonreplicating Mycobacterium tuberculosis.
2013
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
VARIMAXHF
CCD
2009-09-29
RIGAKU SATURN 944
SINGLE WAVELENGTH
M
x-ray
1
1.54
1.0
1.54
ROTATING ANODE
RIGAKU FR-E
21993.738
DNA gyrase subunit B,DNA gyrase subunit B,DNA gyrase subunit B
5.99.1.3,5.99.1.3,5.99.1.3
ATPASE DOMAIN, RESIDUES 9-102,123-213,246-255,ATPASE DOMAIN, RESIDUES 9-102,123-213,246-255,ATPASE DOMAIN, RESIDUES 9-102,123-213,246-255
YES,YES,YES
2
man
polymer
474.598
6-(3,4-dimethylphenyl)-3-[[4-[3-(4-methylpiperazin-1-yl)propoxy]phenyl]amino]pyrazine-2-carboxamide
2
syn
non-polymer
22.990
SODIUM ION
2
syn
non-polymer
18.015
water
112
nat
water
no
no
MPKEYGADSITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAGFATRVDVKIHADGSVEVRDDGRGIPVE
MHATGMPTIDVVMTQVGVSVVNALSTRLEATVLRDGYEWFQYYDRSVPGKLKQGGETKETGTTIRFWADPEIFETTDYNF
ETVARRLQEMAFLNKGLTIELTDERDGKHRVFHYPG
MPKEYGADSITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAGFATRVDVKIHADGSVEVRDDGRGIPVE
MHATGMPTIDVVMTQVGVSVVNALSTRLEATVLRDGYEWFQYYDRSVPGKLKQGGETKETGTTIRFWADPEIFETTDYNF
ETVARRLQEMAFLNKGLTIELTDERDGKHRVFHYPG
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
1
95
gyrB
1772
Mycobacterium smegmatis
469008
Escherichia coli BL21(DE3)
Biological sequence
sample
96
186
gyrB
1772
Mycobacterium smegmatis
469008
Escherichia coli BL21(DE3)
Biological sequence
sample
187
196
gyrB
1772
Mycobacterium smegmatis
469008
Escherichia coli BL21(DE3)
Biological sequence
1
1.97
37.54
NONE
5.7
100MM NA ACETATE PH 5.7, 200MM CALCIUM ACETATE, 19% PEG 8000
diffrn_source
citation
entity
entity_src_gen
entity_src_nat
struct_ref
struct_ref_seq
struct_ref_seq_dif
repository
Initial release
Database references
Structure summary
Data collection
Data collection
Database references
Source and taxonomy
Structure summary
1
0
2013-01-23
1
1
2013-04-03
1
2
2018-04-04
1
3
2018-11-28
_diffrn_source.type
_citation.journal_abbrev
_citation.journal_id_ISSN
_citation.page_last
_citation.pdbx_database_id_DOI
_citation.title
_entity.pdbx_description
_entity.pdbx_ec
_entity.pdbx_fragment
_entity.pdbx_mutation
_entity.src_method
_struct_ref_seq.db_align_end
_struct_ref_seq.pdbx_auth_seq_align_end
_struct_ref_seq.ref_id
_struct_ref_seq.seq_align_end
_struct_ref_seq_dif.align_id
_struct_ref_seq_dif.details
PDBE
Y
PDBE
2012-08-09
REL
B5U
6-(3,4-dimethylphenyl)-3-[[4-[3-(4-methylpiperazin-1-yl)propoxy]phenyl]amino]pyrazine-2-carboxamide
NA
SODIUM ION
HOH
water
RESIDUES 103-122 DELETED AND RESIDUES 213-246 REPLACED BY
DG TO IMPROVE CRYTALLISABILITY
B5U
1256
2
B5U
B5U
1256
A
NA
1257
3
NA
NA
1257
A
B5U
1256
2
B5U
B5U
1256
B
NA
1257
3
NA
NA
1257
B
HOH
2001
4
HOH
HOH
2001
A
HOH
2002
4
HOH
HOH
2002
A
HOH
2003
4
HOH
HOH
2003
A
HOH
2004
4
HOH
HOH
2004
A
HOH
2005
4
HOH
HOH
2005
A
HOH
2006
4
HOH
HOH
2006
A
HOH
2007
4
HOH
HOH
2007
A
HOH
2008
4
HOH
HOH
2008
A
HOH
2009
4
HOH
HOH
2009
A
HOH
2010
4
HOH
HOH
2010
A
HOH
2011
4
HOH
HOH
2011
A
HOH
2012
4
HOH
HOH
2012
A
HOH
2013
4
HOH
HOH
2013
A
HOH
2014
4
HOH
HOH
2014
A
HOH
2015
4
HOH
HOH
2015
A
HOH
2016
4
HOH
HOH
2016
A
HOH
2017
4
HOH
HOH
2017
A
HOH
2018
4
HOH
HOH
2018
A
HOH
2019
4
HOH
HOH
2019
A
HOH
2020
4
HOH
HOH
2020
A
HOH
2021
4
HOH
HOH
2021
A
HOH
2022
4
HOH
HOH
2022
A
HOH
2023
4
HOH
HOH
2023
A
HOH
2024
4
HOH
HOH
2024
A
HOH
2025
4
HOH
HOH
2025
A
HOH
2026
4
HOH
HOH
2026
A
HOH
2027
4
HOH
HOH
2027
A
HOH
2028
4
HOH
HOH
2028
A
HOH
2029
4
HOH
HOH
2029
A
HOH
2030
4
HOH
HOH
2030
A
HOH
2031
4
HOH
HOH
2031
A
HOH
2032
4
HOH
HOH
2032
A
HOH
2033
4
HOH
HOH
2033
A
HOH
2034
4
HOH
HOH
2034
A
HOH
2035
4
HOH
HOH
2035
A
HOH
2036
4
HOH
HOH
2036
A
HOH
2037
4
HOH
HOH
2037
A
HOH
2038
4
HOH
HOH
2038
A
HOH
2039
4
HOH
HOH
2039
A
HOH
2040
4
HOH
HOH
2040
A
HOH
2041
4
HOH
HOH
2041
A
HOH
2042
4
HOH
HOH
2042
A
HOH
2043
4
HOH
HOH
2043
A
HOH
2044
4
HOH
HOH
2044
A
HOH
2045
4
HOH
HOH
2045
A
HOH
2046
4
HOH
HOH
2046
A
HOH
2047
4
HOH
HOH
2047
A
HOH
2048
4
HOH
HOH
2048
A
HOH
2049
4
HOH
HOH
2049
A
HOH
2050
4
HOH
HOH
2050
A
HOH
2051
4
HOH
HOH
2051
A
HOH
2052
4
HOH
HOH
2052
A
HOH
2053
4
HOH
HOH
2053
A
HOH
2054
4
HOH
HOH
2054
A
HOH
2055
4
HOH
HOH
2055
A
HOH
2056
4
HOH
HOH
2056
A
HOH
2057
4
HOH
HOH
2057
A
HOH
2001
4
HOH
HOH
2001
B
HOH
2002
4
HOH
HOH
2002
B
HOH
2003
4
HOH
HOH
2003
B
HOH
2004
4
HOH
HOH
2004
B
HOH
2005
4
HOH
HOH
2005
B
HOH
2006
4
HOH
HOH
2006
B
HOH
2007
4
HOH
HOH
2007
B
HOH
2008
4
HOH
HOH
2008
B
HOH
2009
4
HOH
HOH
2009
B
HOH
2010
4
HOH
HOH
2010
B
HOH
2011
4
HOH
HOH
2011
B
HOH
2012
4
HOH
HOH
2012
B
HOH
2013
4
HOH
HOH
2013
B
HOH
2014
4
HOH
HOH
2014
B
HOH
2015
4
HOH
HOH
2015
B
HOH
2016
4
HOH
HOH
2016
B
HOH
2017
4
HOH
HOH
2017
B
HOH
2018
4
HOH
HOH
2018
B
HOH
2019
4
HOH
HOH
2019
B
HOH
2020
4
HOH
HOH
2020
B
HOH
2021
4
HOH
HOH
2021
B
HOH
2022
4
HOH
HOH
2022
B
HOH
2023
4
HOH
HOH
2023
B
HOH
2024
4
HOH
HOH
2024
B
HOH
2025
4
HOH
HOH
2025
B
HOH
2026
4
HOH
HOH
2026
B
HOH
2027
4
HOH
HOH
2027
B
HOH
2028
4
HOH
HOH
2028
B
HOH
2029
4
HOH
HOH
2029
B
HOH
2030
4
HOH
HOH
2030
B
HOH
2031
4
HOH
HOH
2031
B
HOH
2032
4
HOH
HOH
2032
B
HOH
2033
4
HOH
HOH
2033
B
HOH
2034
4
HOH
HOH
2034
B
HOH
2035
4
HOH
HOH
2035
B
HOH
2036
4
HOH
HOH
2036
B
HOH
2037
4
HOH
HOH
2037
B
HOH
2038
4
HOH
HOH
2038
B
HOH
2039
4
HOH
HOH
2039
B
HOH
2040
4
HOH
HOH
2040
B
HOH
2041
4
HOH
HOH
2041
B
HOH
2042
4
HOH
HOH
2042
B
HOH
2043
4
HOH
HOH
2043
B
HOH
2044
4
HOH
HOH
2044
B
HOH
2045
4
HOH
HOH
2045
B
HOH
2046
4
HOH
HOH
2046
B
HOH
2047
4
HOH
HOH
2047
B
HOH
2048
4
HOH
HOH
2048
B
HOH
2049
4
HOH
HOH
2049
B
HOH
2050
4
HOH
HOH
2050
B
HOH
2051
4
HOH
HOH
2051
B
HOH
2052
4
HOH
HOH
2052
B
HOH
2053
4
HOH
HOH
2053
B
HOH
2054
4
HOH
HOH
2054
B
HOH
2055
4
HOH
HOH
2055
B
n
1
8
A
n
2
9
A
n
3
10
A
n
4
11
A
n
5
12
A
n
6
13
A
n
7
14
A
n
8
15
A
n
9
16
A
n
10
17
A
n
11
18
A
n
12
19
A
n
13
20
A
n
14
21
A
n
15
22
A
n
16
23
A
n
17
24
A
n
18
25
A
n
19
26
A
n
20
27
A
n
21
28
A
n
22
29
A
n
23
30
A
n
24
31
A
n
25
32
A
n
26
33
A
n
27
34
A
n
28
35
A
SER
36
n
29
SER
36
A
THR
37
n
30
THR
37
A
GLY
38
n
31
GLY
38
A
GLU
39
n
32
GLU
39
A
ARG
40
n
33
ARG
40
A
GLY
41
n
34
GLY
41
A
LEU
42
n
35
LEU
42
A
HIS
43
n
36
HIS
43
A
HIS
44
n
37
HIS
44
A
LEU
45
n
38
LEU
45
A
ILE
46
n
39
ILE
46
A
TRP
47
n
40
TRP
47
A
GLU
48
n
41
GLU
48
A
VAL
49
n
42
VAL
49
A
VAL
50
n
43
VAL
50
A
ASP
51
n
44
ASP
51
A
ASN
52
n
45
ASN
52
A
ALA
53
n
46
ALA
53
A
VAL
54
n
47
VAL
54
A
ASP
55
n
48
ASP
55
A
GLU
56
n
49
GLU
56
A
ALA
57
n
50
ALA
57
A
MET
58
n
51
MET
58
A
ALA
59
n
52
ALA
59
A
GLY
60
n
53
GLY
60
A
PHE
61
n
54
PHE
61
A
ALA
62
n
55
ALA
62
A
THR
63
n
56
THR
63
A
ARG
64
n
57
ARG
64
A
VAL
65
n
58
VAL
65
A
ASP
66
n
59
ASP
66
A
VAL
67
n
60
VAL
67
A
LYS
68
n
61
LYS
68
A
ILE
69
n
62
ILE
69
A
HIS
70
n
63
HIS
70
A
ALA
71
n
64
ALA
71
A
ASP
72
n
65
ASP
72
A
GLY
73
n
66
GLY
73
A
SER
74
n
67
SER
74
A
VAL
75
n
68
VAL
75
A
GLU
76
n
69
GLU
76
A
VAL
77
n
70
VAL
77
A
ARG
78
n
71
ARG
78
A
ASP
79
n
72
ASP
79
A
ASP
80
n
73
ASP
80
A
GLY
81
n
74
GLY
81
A
ARG
82
n
75
ARG
82
A
GLY
83
n
76
GLY
83
A
ILE
84
n
77
ILE
84
A
PRO
85
n
78
PRO
85
A
VAL
86
n
79
VAL
86
A
n
80
87
A
n
81
88
A
n
82
89
A
n
83
90
A
n
84
91
A
n
85
92
A
n
86
93
A
PRO
94
n
87
PRO
94
A
THR
95
n
88
THR
95
A
ILE
96
n
89
ILE
96
A
ASP
97
n
90
ASP
97
A
VAL
98
n
91
VAL
98
A
VAL
99
n
92
VAL
99
A
MET
100
n
93
MET
100
A
THR
101
n
94
THR
101
A
GLN
102
n
95
GLN
102
A
VAL
123
n
96
VAL
123
A
GLY
124
n
97
GLY
124
A
VAL
125
n
98
VAL
125
A
SER
126
n
99
SER
126
A
VAL
127
n
100
VAL
127
A
VAL
128
n
101
VAL
128
A
ASN
129
n
102
ASN
129
A
ALA
130
n
103
ALA
130
A
LEU
131
n
104
LEU
131
A
SER
132
n
105
SER
132
A
THR
133
n
106
THR
133
A
ARG
134
n
107
ARG
134
A
LEU
135
n
108
LEU
135
A
GLU
136
n
109
GLU
136
A
ALA
137
n
110
ALA
137
A
THR
138
n
111
THR
138
A
VAL
139
n
112
VAL
139
A
LEU
140
n
113
LEU
140
A
ARG
141
n
114
ARG
141
A
ASP
142
n
115
ASP
142
A
GLY
143
n
116
GLY
143
A
TYR
144
n
117
TYR
144
A
GLU
145
n
118
GLU
145
A
TRP
146
n
119
TRP
146
A
PHE
147
n
120
PHE
147
A
GLN
148
n
121
GLN
148
A
TYR
149
n
122
TYR
149
A
TYR
150
n
123
TYR
150
A
ASP
151
n
124
ASP
151
A
ARG
152
n
125
ARG
152
A
SER
153
n
126
SER
153
A
VAL
154
n
127
VAL
154
A
PRO
155
n
128
PRO
155
A
GLY
156
n
129
GLY
156
A
LYS
157
n
130
LYS
157
A
LEU
158
n
131
LEU
158
A
LYS
159
n
132
LYS
159
A
GLN
160
n
133
GLN
160
A
GLY
161
n
134
GLY
161
A
GLY
162
n
135
GLY
162
A
GLU
163
n
136
GLU
163
A
THR
164
n
137
THR
164
A
LYS
165
n
138
LYS
165
A
GLU
166
n
139
GLU
166
A
THR
167
n
140
THR
167
A
GLY
168
n
141
GLY
168
A
THR
169
n
142
THR
169
A
THR
170
n
143
THR
170
A
ILE
171
n
144
ILE
171
A
ARG
172
n
145
ARG
172
A
PHE
173
n
146
PHE
173
A
TRP
174
n
147
TRP
174
A
ALA
175
n
148
ALA
175
A
ASP
176
n
149
ASP
176
A
PRO
177
n
150
PRO
177
A
GLU
178
n
151
GLU
178
A
ILE
179
n
152
ILE
179
A
PHE
180
n
153
PHE
180
A
GLU
181
n
154
GLU
181
A
THR
182
n
155
THR
182
A
THR
183
n
156
THR
183
A
ASP
184
n
157
ASP
184
A
TYR
185
n
158
TYR
185
A
ASN
186
n
159
ASN
186
A
PHE
187
n
160
PHE
187
A
GLU
188
n
161
GLU
188
A
THR
189
n
162
THR
189
A
VAL
190
n
163
VAL
190
A
ALA
191
n
164
ALA
191
A
ARG
192
n
165
ARG
192
A
ARG
193
n
166
ARG
193
A
LEU
194
n
167
LEU
194
A
GLN
195
n
168
GLN
195
A
GLU
196
n
169
GLU
196
A
MET
197
n
170
MET
197
A
ALA
198
n
171
ALA
198
A
PHE
199
n
172
PHE
199
A
LEU
200
n
173
LEU
200
A
ASN
201
n
174
ASN
201
A
LYS
202
n
175
LYS
202
A
GLY
203
n
176
GLY
203
A
LEU
204
n
177
LEU
204
A
THR
205
n
178
THR
205
A
ILE
206
n
179
ILE
206
A
GLU
207
n
180
GLU
207
A
LEU
208
n
181
LEU
208
A
THR
209
n
182
THR
209
A
ASP
210
n
183
ASP
210
A
GLU
211
n
184
GLU
211
A
ARG
212
n
185
ARG
212
A
ASP
213
n
186
ASP
213
A
GLY
246
n
187
GLY
246
A
LYS
247
n
188
LYS
247
A
HIS
248
n
189
HIS
248
A
ARG
249
n
190
ARG
249
A
VAL
250
n
191
VAL
250
A
PHE
251
n
192
PHE
251
A
HIS
252
n
193
HIS
252
A
TYR
253
n
194
TYR
253
A
PRO
254
n
195
PRO
254
A
GLY
255
n
196
GLY
255
A
n
1
8
B
n
2
9
B
n
3
10
B
n
4
11
B
n
5
12
B
n
6
13
B
n
7
14
B
n
8
15
B
n
9
16
B
n
10
17
B
n
11
18
B
n
12
19
B
n
13
20
B
n
14
21
B
n
15
22
B
n
16
23
B
n
17
24
B
n
18
25
B
n
19
26
B
n
20
27
B
n
21
28
B
n
22
29
B
n
23
30
B
n
24
31
B
n
25
32
B
n
26
33
B
n
27
34
B
n
28
35
B
n
29
36
B
THR
37
n
30
THR
37
B
GLY
38
n
31
GLY
38
B
GLU
39
n
32
GLU
39
B
ARG
40
n
33
ARG
40
B
GLY
41
n
34
GLY
41
B
LEU
42
n
35
LEU
42
B
HIS
43
n
36
HIS
43
B
HIS
44
n
37
HIS
44
B
LEU
45
n
38
LEU
45
B
ILE
46
n
39
ILE
46
B
TRP
47
n
40
TRP
47
B
GLU
48
n
41
GLU
48
B
VAL
49
n
42
VAL
49
B
VAL
50
n
43
VAL
50
B
ASP
51
n
44
ASP
51
B
ASN
52
n
45
ASN
52
B
ALA
53
n
46
ALA
53
B
VAL
54
n
47
VAL
54
B
ASP
55
n
48
ASP
55
B
GLU
56
n
49
GLU
56
B
ALA
57
n
50
ALA
57
B
MET
58
n
51
MET
58
B
ALA
59
n
52
ALA
59
B
GLY
60
n
53
GLY
60
B
PHE
61
n
54
PHE
61
B
ALA
62
n
55
ALA
62
B
THR
63
n
56
THR
63
B
ARG
64
n
57
ARG
64
B
VAL
65
n
58
VAL
65
B
ASP
66
n
59
ASP
66
B
VAL
67
n
60
VAL
67
B
LYS
68
n
61
LYS
68
B
ILE
69
n
62
ILE
69
B
HIS
70
n
63
HIS
70
B
ALA
71
n
64
ALA
71
B
ASP
72
n
65
ASP
72
B
GLY
73
n
66
GLY
73
B
SER
74
n
67
SER
74
B
VAL
75
n
68
VAL
75
B
GLU
76
n
69
GLU
76
B
VAL
77
n
70
VAL
77
B
ARG
78
n
71
ARG
78
B
ASP
79
n
72
ASP
79
B
ASP
80
n
73
ASP
80
B
GLY
81
n
74
GLY
81
B
ARG
82
n
75
ARG
82
B
GLY
83
n
76
GLY
83
B
ILE
84
n
77
ILE
84
B
PRO
85
n
78
PRO
85
B
VAL
86
n
79
VAL
86
B
GLU
87
n
80
GLU
87
B
MET
88
n
81
MET
88
B
HIS
89
n
82
HIS
89
B
ALA
90
n
83
ALA
90
B
THR
91
n
84
THR
91
B
GLY
92
n
85
GLY
92
B
MET
93
n
86
MET
93
B
PRO
94
n
87
PRO
94
B
THR
95
n
88
THR
95
B
ILE
96
n
89
ILE
96
B
ASP
97
n
90
ASP
97
B
VAL
98
n
91
VAL
98
B
VAL
99
n
92
VAL
99
B
MET
100
n
93
MET
100
B
THR
101
n
94
THR
101
B
GLN
102
n
95
GLN
102
B
VAL
123
n
96
VAL
123
B
GLY
124
n
97
GLY
124
B
VAL
125
n
98
VAL
125
B
SER
126
n
99
SER
126
B
VAL
127
n
100
VAL
127
B
VAL
128
n
101
VAL
128
B
ASN
129
n
102
ASN
129
B
ALA
130
n
103
ALA
130
B
LEU
131
n
104
LEU
131
B
SER
132
n
105
SER
132
B
THR
133
n
106
THR
133
B
ARG
134
n
107
ARG
134
B
LEU
135
n
108
LEU
135
B
GLU
136
n
109
GLU
136
B
ALA
137
n
110
ALA
137
B
THR
138
n
111
THR
138
B
VAL
139
n
112
VAL
139
B
LEU
140
n
113
LEU
140
B
ARG
141
n
114
ARG
141
B
ASP
142
n
115
ASP
142
B
GLY
143
n
116
GLY
143
B
TYR
144
n
117
TYR
144
B
GLU
145
n
118
GLU
145
B
TRP
146
n
119
TRP
146
B
PHE
147
n
120
PHE
147
B
GLN
148
n
121
GLN
148
B
TYR
149
n
122
TYR
149
B
TYR
150
n
123
TYR
150
B
ASP
151
n
124
ASP
151
B
ARG
152
n
125
ARG
152
B
SER
153
n
126
SER
153
B
VAL
154
n
127
VAL
154
B
PRO
155
n
128
PRO
155
B
GLY
156
n
129
GLY
156
B
LYS
157
n
130
LYS
157
B
LEU
158
n
131
LEU
158
B
LYS
159
n
132
LYS
159
B
GLN
160
n
133
GLN
160
B
GLY
161
n
134
GLY
161
B
GLY
162
n
135
GLY
162
B
GLU
163
n
136
GLU
163
B
THR
164
n
137
THR
164
B
LYS
165
n
138
LYS
165
B
GLU
166
n
139
GLU
166
B
THR
167
n
140
THR
167
B
GLY
168
n
141
GLY
168
B
THR
169
n
142
THR
169
B
THR
170
n
143
THR
170
B
ILE
171
n
144
ILE
171
B
ARG
172
n
145
ARG
172
B
PHE
173
n
146
PHE
173
B
TRP
174
n
147
TRP
174
B
ALA
175
n
148
ALA
175
B
ASP
176
n
149
ASP
176
B
PRO
177
n
150
PRO
177
B
GLU
178
n
151
GLU
178
B
ILE
179
n
152
ILE
179
B
PHE
180
n
153
PHE
180
B
GLU
181
n
154
GLU
181
B
THR
182
n
155
THR
182
B
THR
183
n
156
THR
183
B
ASP
184
n
157
ASP
184
B
TYR
185
n
158
TYR
185
B
ASN
186
n
159
ASN
186
B
PHE
187
n
160
PHE
187
B
GLU
188
n
161
GLU
188
B
THR
189
n
162
THR
189
B
VAL
190
n
163
VAL
190
B
ALA
191
n
164
ALA
191
B
ARG
192
n
165
ARG
192
B
ARG
193
n
166
ARG
193
B
LEU
194
n
167
LEU
194
B
GLN
195
n
168
GLN
195
B
GLU
196
n
169
GLU
196
B
MET
197
n
170
MET
197
B
ALA
198
n
171
ALA
198
B
PHE
199
n
172
PHE
199
B
LEU
200
n
173
LEU
200
B
ASN
201
n
174
ASN
201
B
LYS
202
n
175
LYS
202
B
GLY
203
n
176
GLY
203
B
LEU
204
n
177
LEU
204
B
THR
205
n
178
THR
205
B
ILE
206
n
179
ILE
206
B
GLU
207
n
180
GLU
207
B
LEU
208
n
181
LEU
208
B
THR
209
n
182
THR
209
B
ASP
210
n
183
ASP
210
B
GLU
211
n
184
GLU
211
B
ARG
212
n
185
ARG
212
B
ASP
213
n
186
ASP
213
B
GLY
246
n
187
GLY
246
B
LYS
247
n
188
LYS
247
B
HIS
248
n
189
HIS
248
B
ARG
249
n
190
ARG
249
B
VAL
250
n
191
VAL
250
B
PHE
251
n
192
PHE
251
B
HIS
252
n
193
HIS
252
B
TYR
253
n
194
TYR
253
B
PRO
254
n
195
PRO
254
B
GLY
255
n
196
GLY
255
B
0.7440
-0.3215
0.7069
2.4743
-0.2642
2.5775
-0.0062
0.0512
0.0328
0.1034
0.0254
-0.0890
0.1220
0.2300
-0.0192
0.0562
-0.0060
0.0294
0.1630
-0.0162
-0.0055
refined
21.9409
40.6747
82.3372
X-RAY DIFFRACTION
2.6591
0.0157
0.5647
1.1580
-1.0302
1.9857
-0.1107
0.0013
0.0826
0.0122
0.0587
-0.0127
-0.0908
-0.0320
0.0520
0.0254
0.0214
0.0083
0.0802
-0.0209
-0.0219
refined
1.6835
24.4647
60.5549
X-RAY DIFFRACTION
X-RAY DIFFRACTION
1
CHAIN A AND RESIDUES 36 - 255
X-RAY DIFFRACTION
2
CHAIN B AND RESIDUES 37 - 255
author_and_software_defined_assembly
PISA
1
monomeric
author_and_software_defined_assembly
PISA
1
monomeric
A
GLY
81
A
O
GLY
74
1_555
A
NA
1257
D
NA
NA
1_555
A
THR
167
A
OG1
THR
140
1_555
75.0
A
GLY
81
A
O
GLY
74
1_555
A
NA
1257
D
NA
NA
1_555
A
ASP
80
A
O
ASP
73
1_555
73.8
A
THR
167
A
OG1
THR
140
1_555
A
NA
1257
D
NA
NA
1_555
A
ASP
80
A
O
ASP
73
1_555
142.6
A
GLY
81
A
O
GLY
74
1_555
A
NA
1257
D
NA
NA
1_555
A
HOH
2042
G
O
HOH
1_555
137.4
A
THR
167
A
OG1
THR
140
1_555
A
NA
1257
D
NA
NA
1_555
A
HOH
2042
G
O
HOH
1_555
68.1
A
ASP
80
A
O
ASP
73
1_555
A
NA
1257
D
NA
NA
1_555
A
HOH
2042
G
O
HOH
1_555
147.8
A
GLY
81
A
O
GLY
74
1_555
A
NA
1257
D
NA
NA
1_555
A
HOH
2041
G
O
HOH
1_555
125.1
A
THR
167
A
OG1
THR
140
1_555
A
NA
1257
D
NA
NA
1_555
A
HOH
2041
G
O
HOH
1_555
81.2
A
ASP
80
A
O
ASP
73
1_555
A
NA
1257
D
NA
NA
1_555
A
HOH
2041
G
O
HOH
1_555
100.4
A
HOH
2042
G
O
HOH
1_555
A
NA
1257
D
NA
NA
1_555
A
HOH
2041
G
O
HOH
1_555
69.9
B
THR
167
B
O
THR
140
1_555
B
NA
1257
F
NA
NA
1_555
B
THR
167
B
OG1
THR
140
1_555
72.2
B
THR
167
B
O
THR
140
1_555
B
NA
1257
F
NA
NA
1_555
B
HOH
2010
H
O
HOH
1_555
134.9
B
THR
167
B
OG1
THR
140
1_555
B
NA
1257
F
NA
NA
1_555
B
HOH
2010
H
O
HOH
1_555
91.2
B
THR
167
B
O
THR
140
1_555
B
NA
1257
F
NA
NA
1_555
B
GLY
81
B
O
GLY
74
1_555
62.0
B
THR
167
B
OG1
THR
140
1_555
B
NA
1257
F
NA
NA
1_555
B
GLY
81
B
O
GLY
74
1_555
69.0
B
HOH
2010
H
O
HOH
1_555
B
NA
1257
F
NA
NA
1_555
B
GLY
81
B
O
GLY
74
1_555
72.9
B
THR
167
B
O
THR
140
1_555
B
NA
1257
F
NA
NA
1_555
B
ASP
80
B
O
ASP
73
1_555
78.9
B
THR
167
B
OG1
THR
140
1_555
B
NA
1257
F
NA
NA
1_555
B
ASP
80
B
O
ASP
73
1_555
135.0
B
HOH
2010
H
O
HOH
1_555
B
NA
1257
F
NA
NA
1_555
B
ASP
80
B
O
ASP
73
1_555
85.3
B
GLY
81
B
O
GLY
74
1_555
B
NA
1257
F
NA
NA
1_555
B
ASP
80
B
O
ASP
73
1_555
67.1
B
THR
167
B
O
THR
140
1_555
B
NA
1257
F
NA
NA
1_555
B
HOH
2011
H
O
HOH
1_555
142.3
B
THR
167
B
OG1
THR
140
1_555
B
NA
1257
F
NA
NA
1_555
B
HOH
2011
H
O
HOH
1_555
145.5
B
HOH
2010
H
O
HOH
1_555
B
NA
1257
F
NA
NA
1_555
B
HOH
2011
H
O
HOH
1_555
63.6
B
GLY
81
B
O
GLY
74
1_555
B
NA
1257
F
NA
NA
1_555
B
HOH
2011
H
O
HOH
1_555
119.7
B
ASP
80
B
O
ASP
73
1_555
B
NA
1257
F
NA
NA
1_555
B
HOH
2011
H
O
HOH
1_555
69.6
B
THR
167
B
O
THR
140
1_555
B
NA
1257
F
NA
NA
1_555
B
HOH
2044
H
O
HOH
1_555
124.2
B
THR
167
B
OG1
THR
140
1_555
B
NA
1257
F
NA
NA
1_555
B
HOH
2044
H
O
HOH
1_555
76.0
B
HOH
2010
H
O
HOH
1_555
B
NA
1257
F
NA
NA
1_555
B
HOH
2044
H
O
HOH
1_555
89.6
B
GLY
81
B
O
GLY
74
1_555
B
NA
1257
F
NA
NA
1_555
B
HOH
2044
H
O
HOH
1_555
140.1
B
ASP
80
B
O
ASP
73
1_555
B
NA
1257
F
NA
NA
1_555
B
HOH
2044
H
O
HOH
1_555
148.6
B
HOH
2011
H
O
HOH
1_555
B
NA
1257
F
NA
NA
1_555
B
HOH
2044
H
O
HOH
1_555
80.3
B
THR
167
B
O
THR
140
1_555
B
NA
1257
F
NA
NA
1_555
B
HOH
2043
H
O
HOH
1_555
68.6
B
THR
167
B
OG1
THR
140
1_555
B
NA
1257
F
NA
NA
1_555
B
HOH
2043
H
O
HOH
1_555
95.0
B
HOH
2010
H
O
HOH
1_555
B
NA
1257
F
NA
NA
1_555
B
HOH
2043
H
O
HOH
1_555
156.3
B
GLY
81
B
O
GLY
74
1_555
B
NA
1257
F
NA
NA
1_555
B
HOH
2043
H
O
HOH
1_555
130.5
B
ASP
80
B
O
ASP
73
1_555
B
NA
1257
F
NA
NA
1_555
B
HOH
2043
H
O
HOH
1_555
105.8
B
HOH
2011
H
O
HOH
1_555
B
NA
1257
F
NA
NA
1_555
B
HOH
2043
H
O
HOH
1_555
100.1
B
HOH
2044
H
O
HOH
1_555
B
NA
1257
F
NA
NA
1_555
B
HOH
2043
H
O
HOH
1_555
69.9
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
VAL
154
A
N
VAL
127
A
O
ASP
151
A
O
ASP
124
A
N
GLY
161
A
N
GLY
134
A
O
GLU
145
A
O
GLU
118
A
N
PHE
251
A
N
PHE
192
A
O
ILE
206
A
O
ILE
179
A
N
GLU
207
A
N
GLU
180
A
O
VAL
65
A
O
VAL
58
A
N
LYS
68
A
N
LYS
61
A
O
GLU
76
A
O
GLU
69
A
N
ASP
79
A
N
ASP
72
A
O
THR
169
A
O
THR
142
A
O
TRP
174
A
O
TRP
147
A
N
THR
133
A
N
THR
106
A
N
ARG
141
A
N
ARG
114
A
O
TYR
144
A
O
TYR
117
A
N
ASP
151
A
N
ASP
124
A
O
VAL
154
A
O
VAL
127
A
N
PHE
251
A
N
PHE
192
A
O
ILE
206
A
O
ILE
179
A
N
GLU
207
A
N
GLU
180
A
O
VAL
65
A
O
VAL
58
A
N
LYS
68
A
N
LYS
61
A
O
GLU
76
A
O
GLU
69
A
N
ASP
79
A
N
ASP
72
A
O
THR
169
A
O
THR
142
A
O
TRP
174
A
O
TRP
147
A
N
THR
133
A
N
THR
106
A
N
ARG
141
A
N
ARG
114
A
O
TYR
144
A
O
TYR
117
A
N
PHE
147
A
N
PHE
120
A
O
LYS
159
A
O
LYS
132
B
N
VAL
154
B
N
VAL
127
B
O
ASP
151
B
O
ASP
124
B
N
GLY
161
B
N
GLY
134
B
O
GLU
145
B
O
GLU
118
B
N
PHE
251
B
N
PHE
192
B
O
ILE
206
B
O
ILE
179
B
N
GLU
207
B
N
GLU
180
B
O
VAL
65
B
O
VAL
58
B
N
LYS
68
B
N
LYS
61
B
O
GLU
76
B
O
GLU
69
B
N
ASP
79
B
N
ASP
72
B
O
THR
169
B
O
THR
142
B
O
TRP
174
B
O
TRP
147
B
N
THR
133
B
N
THR
106
B
N
ARG
141
B
N
ARG
114
B
O
TYR
144
B
O
TYR
117
B
N
ASP
151
B
N
ASP
124
B
O
VAL
154
B
O
VAL
127
B
N
PHE
251
B
N
PHE
192
B
O
ILE
206
B
O
ILE
179
B
N
GLU
207
B
N
GLU
180
B
O
VAL
65
B
O
VAL
58
B
N
LYS
68
B
N
LYS
61
B
O
GLU
76
B
O
GLU
69
B
N
ASP
79
B
N
ASP
72
B
O
THR
169
B
O
THR
142
B
O
TRP
174
B
O
TRP
147
B
N
THR
133
B
N
THR
106
B
N
ARG
141
B
N
ARG
114
B
O
TYR
144
B
O
TYR
117
B
N
PHE
147
B
N
PHE
120
B
O
LYS
159
B
O
LYS
132
1
A
OG1
THR
95
A
OG1
THR
88
1
Y
1
A
CG2
THR
95
A
CG2
THR
88
1
Y
1
A
CG
GLN
102
A
CG
GLN
95
1
Y
1
A
CD
GLN
102
A
CD
GLN
95
1
Y
1
A
OE1
GLN
102
A
OE1
GLN
95
1
Y
1
A
NE2
GLN
102
A
NE2
GLN
95
1
Y
1
A
CG
LYS
157
A
CG
LYS
130
1
Y
1
A
CD
LYS
157
A
CD
LYS
130
1
Y
1
A
CE
LYS
157
A
CE
LYS
130
1
Y
1
A
NZ
LYS
157
A
NZ
LYS
130
1
Y
1
A
CG
LYS
159
A
CG
LYS
132
1
Y
1
A
CD
LYS
159
A
CD
LYS
132
1
Y
1
A
CE
LYS
159
A
CE
LYS
132
1
Y
1
A
NZ
LYS
159
A
NZ
LYS
132
1
Y
1
A
CE
LYS
165
A
CE
LYS
138
1
Y
1
A
NZ
LYS
165
A
NZ
LYS
138
1
Y
1
A
CG
GLU
181
A
CG
GLU
154
1
Y
1
A
CD
GLU
181
A
CD
GLU
154
1
Y
1
A
OE1
GLU
181
A
OE1
GLU
154
1
Y
1
A
OE2
GLU
181
A
OE2
GLU
154
1
Y
1
A
OG1
THR
182
A
OG1
THR
155
1
Y
1
A
CG2
THR
182
A
CG2
THR
155
1
Y
1
B
CG
GLN
102
B
CG
GLN
95
1
Y
1
B
CD
GLN
102
B
CD
GLN
95
1
Y
1
B
OE1
GLN
102
B
OE1
GLN
95
1
Y
1
B
NE2
GLN
102
B
NE2
GLN
95
1
Y
1
B
CD
LYS
165
B
CD
LYS
138
1
Y
1
B
CE
LYS
165
B
CE
LYS
138
1
Y
1
B
NZ
LYS
165
B
NZ
LYS
138
1
Y
1
B
CG
GLU
178
B
CG
GLU
151
1
Y
1
B
CD
GLU
178
B
CD
GLU
151
1
Y
1
B
OE1
GLU
178
B
OE1
GLU
151
1
Y
1
B
OE2
GLU
178
B
OE2
GLU
151
1
Y
1
A
MET
8
A
MET
1
1
Y
1
A
PRO
9
A
PRO
2
1
Y
1
A
LYS
10
A
LYS
3
1
Y
1
A
GLU
11
A
GLU
4
1
Y
1
A
TYR
12
A
TYR
5
1
Y
1
A
GLY
13
A
GLY
6
1
Y
1
A
ALA
14
A
ALA
7
1
Y
1
A
ASP
15
A
ASP
8
1
Y
1
A
SER
16
A
SER
9
1
Y
1
A
ILE
17
A
ILE
10
1
Y
1
A
THR
18
A
THR
11
1
Y
1
A
ILE
19
A
ILE
12
1
Y
1
A
LEU
20
A
LEU
13
1
Y
1
A
GLU
21
A
GLU
14
1
Y
1
A
GLY
22
A
GLY
15
1
Y
1
A
LEU
23
A
LEU
16
1
Y
1
A
GLU
24
A
GLU
17
1
Y
1
A
ALA
25
A
ALA
18
1
Y
1
A
VAL
26
A
VAL
19
1
Y
1
A
ARG
27
A
ARG
20
1
Y
1
A
LYS
28
A
LYS
21
1
Y
1
A
ARG
29
A
ARG
22
1
Y
1
A
PRO
30
A
PRO
23
1
Y
1
A
GLY
31
A
GLY
24
1
Y
1
A
MET
32
A
MET
25
1
Y
1
A
TYR
33
A
TYR
26
1
Y
1
A
ILE
34
A
ILE
27
1
Y
1
A
GLY
35
A
GLY
28
1
Y
1
A
GLU
87
A
GLU
80
1
Y
1
A
MET
88
A
MET
81
1
Y
1
A
HIS
89
A
HIS
82
1
Y
1
A
ALA
90
A
ALA
83
1
Y
1
A
THR
91
A
THR
84
1
Y
1
A
GLY
92
A
GLY
85
1
Y
1
A
MET
93
A
MET
86
1
Y
1
B
MET
8
B
MET
1
1
Y
1
B
PRO
9
B
PRO
2
1
Y
1
B
LYS
10
B
LYS
3
1
Y
1
B
GLU
11
B
GLU
4
1
Y
1
B
TYR
12
B
TYR
5
1
Y
1
B
GLY
13
B
GLY
6
1
Y
1
B
ALA
14
B
ALA
7
1
Y
1
B
ASP
15
B
ASP
8
1
Y
1
B
SER
16
B
SER
9
1
Y
1
B
ILE
17
B
ILE
10
1
Y
1
B
THR
18
B
THR
11
1
Y
1
B
ILE
19
B
ILE
12
1
Y
1
B
LEU
20
B
LEU
13
1
Y
1
B
GLU
21
B
GLU
14
1
Y
1
B
GLY
22
B
GLY
15
1
Y
1
B
LEU
23
B
LEU
16
1
Y
1
B
GLU
24
B
GLU
17
1
Y
1
B
ALA
25
B
ALA
18
1
Y
1
B
VAL
26
B
VAL
19
1
Y
1
B
ARG
27
B
ARG
20
1
Y
1
B
LYS
28
B
LYS
21
1
Y
1
B
ARG
29
B
ARG
22
1
Y
1
B
PRO
30
B
PRO
23
1
Y
1
B
GLY
31
B
GLY
24
1
Y
1
B
MET
32
B
MET
25
1
Y
1
B
TYR
33
B
TYR
26
1
Y
1
B
ILE
34
B
ILE
27
1
Y
1
B
GLY
35
B
GLY
28
1
Y
1
B
SER
36
B
SER
29
1
Y
1
A
ILE
96
-102.26
60.33
1
A
ASP
97
-147.25
-9.00
1
A
SER
153
76.70
-20.20
1
A
THR
182
-123.52
-58.50
1
A
THR
183
53.49
-1.36
1
B
THR
91
-69.03
4.05
1
B
VAL
123
-73.09
24.68
1
B
VAL
125
80.23
-50.82
1
B
SER
153
76.57
-5.76
1
B
GLU
181
49.66
-111.28
40.05
3.7341
0.0000
0.0000
-6.8215
0.0000
3.0874
0.9374
0.9228
0.2539
0.1990
0.2017
2.20
28.06
815
16098
5.06
89.74
0.338
RANDOM
1
THROUGHOUT
0.0
MOLECULAR REPLACEMENT
0.353
0.240
0.240
INTERNAL MSM GYRB MODEL
2.20
28.06
112
2754
72
0
2570
0.010
2723
HARMONIC
2.00
1.07
3699
HARMONIC
2.00
924
SINUSOIDAL
2.00
68
HARMONIC
2.00
403
HARMONIC
5.00
2723
HARMONIC
20.00
0
SEMIHARMONIC
5.00
3.07
17.61
342
SEMIHARMONIC
5.00
3135
SEMIHARMONIC
4.00
0.2748
0.1981
0.2030
2.35
115
1764
1879
8
6.12
89.74
38.64
2.20
28.06
4B6C
16117
2.0
0.15
1
5.80
5.26
89.8
0.41
2.20
2.28
2.30
1
3.64
51.9
refinement
BUSTER
2.11.2
data reduction
d*TREK
data scaling
d*TREK
phasing
AMoRE
DNA GYRASE SUBUNIT B (E.C.5.99.1.3)
Structure of the M. smegmatis GyrB ATPase domain in complex with an aminopyrazinamide
1
N
N
1
N
N
2
N
N
3
N
N
2
N
N
3
N
N
4
N
N
4
N
N
A
GLY
38
A
GLY
31
HELX_P
A
ALA
59
A
ALA
52
1
1
22
A
VAL
99
A
VAL
92
HELX_P
A
VAL
125
A
VAL
98
1
2
7
A
SER
126
A
SER
99
HELX_P
A
LEU
131
A
LEU
104
1
3
6
A
ASN
186
A
ASN
159
HELX_P
A
ASN
201
A
ASN
174
1
4
16
B
GLY
38
B
GLY
31
HELX_P
B
ALA
59
B
ALA
52
1
5
22
B
PRO
94
B
PRO
87
HELX_P
B
THR
101
B
THR
94
1
6
8
B
ASP
176
B
ASP
149
HELX_P
B
GLU
181
B
GLU
154
1
7
6
B
ASN
186
B
ASN
159
HELX_P
B
ASN
201
B
ASN
174
1
8
16
metalc
2.453
A
NA
1257
D
NA
NA
1_555
A
GLY
81
A
O
GLY
74
1_555
metalc
2.307
A
NA
1257
D
NA
NA
1_555
A
THR
167
A
OG1
THR
140
1_555
metalc
2.382
A
NA
1257
D
NA
NA
1_555
A
ASP
80
A
O
ASP
73
1_555
metalc
2.418
A
NA
1257
D
NA
NA
1_555
A
HOH
2042
G
O
HOH
1_555
metalc
3.047
A
NA
1257
D
NA
NA
1_555
A
HOH
2041
G
O
HOH
1_555
metalc
3.037
B
NA
1257
F
NA
NA
1_555
B
THR
167
B
O
THR
140
1_555
metalc
2.266
B
NA
1257
F
NA
NA
1_555
B
THR
167
B
OG1
THR
140
1_555
metalc
2.418
B
NA
1257
F
NA
NA
1_555
B
HOH
2010
H
O
HOH
1_555
metalc
2.875
B
NA
1257
F
NA
NA
1_555
B
GLY
81
B
O
GLY
74
1_555
metalc
2.566
B
NA
1257
F
NA
NA
1_555
B
ASP
80
B
O
ASP
73
1_555
metalc
2.472
B
NA
1257
F
NA
NA
1_555
B
HOH
2011
H
O
HOH
1_555
metalc
2.421
B
NA
1257
F
NA
NA
1_555
B
HOH
2044
H
O
HOH
1_555
metalc
2.626
B
NA
1257
F
NA
NA
1_555
B
HOH
2043
H
O
HOH
1_555
ISOMERASE
ISOMERASE, DNA TOPOISOMERASE, INHIBITOR
given
-0.558500
0.829470
0.007420
0.829500
0.558500
0.002760
-0.001860
0.007700
-0.999970
-19.27874
-16.43661
142.69847
GYRB_MYCSM
UNP
1
9
P0C559
PKEYGADSITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAGFATRVDVKIHADGSVEVRDDGRGIPVEM
HATGMPTIDVVMTQ
GYRB_MYCSM
UNP
1
123
P0C559
VGVSVVNALSTRLEATVLRDGYEWFQYYDRSVPGKLKQGGETKETGTTIRFWADPEIFETTDYNFETVARRLQEMAFLNK
GLTIELTDERV
GYRB_MYCSM
UNP
1
246
P0C559
VKHRVFHYPG
9
102
4B6C
9
102
P0C559
A
1
2
95
123
213
4B6C
123
213
P0C559
A
2
96
186
246
255
4B6C
246
255
P0C559
A
3
187
196
9
102
4B6C
9
102
P0C559
B
1
2
95
123
213
4B6C
123
213
P0C559
B
2
96
186
246
255
4B6C
246
255
P0C559
B
3
187
196
1
initiating methionine
MET
8
4B6C
A
P0C559
UNP
1
2
VAL
engineered mutation
ASP
213
4B6C
A
P0C559
UNP
213
186
3
VAL
engineered mutation
GLY
246
4B6C
A
P0C559
UNP
246
187
4
initiating methionine
MET
8
4B6C
B
P0C559
UNP
1
5
VAL
engineered mutation
ASP
213
4B6C
B
P0C559
UNP
213
186
6
VAL
engineered mutation
GLY
246
4B6C
B
P0C559
UNP
246
187
2
2
8
8
2
2
8
8
parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
VAL
154
A
VAL
127
A
PRO
155
A
PRO
128
A
TYR
144
A
TYR
117
A
ASP
151
A
ASP
124
A
LYS
159
A
LYS
132
A
GLU
163
A
GLU
136
A
TYR
144
A
TYR
117
A
ASP
151
A
ASP
124
A
HIS
248
A
HIS
189
A
PHE
251
A
PHE
192
A
THR
205
A
THR
178
A
ASP
210
A
ASP
183
A
ARG
64
A
ARG
57
A
ILE
69
A
ILE
62
A
SER
74
A
SER
67
A
ASP
79
A
ASP
72
A
GLY
168
A
GLY
141
A
ALA
175
A
ALA
148
A
SER
132
A
SER
105
A
ARG
141
A
ARG
114
A
TYR
144
A
TYR
117
A
ASP
151
A
ASP
124
A
VAL
154
A
VAL
127
A
PRO
155
A
PRO
128
A
HIS
248
A
HIS
189
A
PHE
251
A
PHE
192
A
THR
205
A
THR
178
A
ASP
210
A
ASP
183
A
ARG
64
A
ARG
57
A
ILE
69
A
ILE
62
A
SER
74
A
SER
67
A
ASP
79
A
ASP
72
A
GLY
168
A
GLY
141
A
ALA
175
A
ALA
148
A
SER
132
A
SER
105
A
ARG
141
A
ARG
114
A
TYR
144
A
TYR
117
A
ASP
151
A
ASP
124
A
LYS
159
A
LYS
132
A
GLU
163
A
GLU
136
B
VAL
154
B
VAL
127
B
PRO
155
B
PRO
128
B
TYR
144
B
TYR
117
B
ASP
151
B
ASP
124
B
LYS
159
B
LYS
132
B
GLU
163
B
GLU
136
B
TYR
144
B
TYR
117
B
ASP
151
B
ASP
124
B
HIS
248
B
HIS
189
B
PHE
251
B
PHE
192
B
THR
205
B
THR
178
B
ASP
210
B
ASP
183
B
ARG
64
B
ARG
57
B
ILE
69
B
ILE
62
B
SER
74
B
SER
67
B
ASP
79
B
ASP
72
B
GLY
168
B
GLY
141
B
ALA
175
B
ALA
148
B
SER
132
B
SER
105
B
ARG
141
B
ARG
114
B
TYR
144
B
TYR
117
B
ASP
151
B
ASP
124
B
VAL
154
B
VAL
127
B
PRO
155
B
PRO
128
B
HIS
248
B
HIS
189
B
PHE
251
B
PHE
192
B
THR
205
B
THR
178
B
ASP
210
B
ASP
183
B
ARG
64
B
ARG
57
B
ILE
69
B
ILE
62
B
SER
74
B
SER
67
B
ASP
79
B
ASP
72
B
GLY
168
B
GLY
141
B
ALA
175
B
ALA
148
B
SER
132
B
SER
105
B
ARG
141
B
ARG
114
B
TYR
144
B
TYR
117
B
ASP
151
B
ASP
124
B
LYS
159
B
LYS
132
B
GLU
163
B
GLU
136
BINDING SITE FOR RESIDUE B5U A 1256
Software
17
BINDING SITE FOR RESIDUE B5U B 1256
Software
17
BINDING SITE FOR RESIDUE NA A 1257
Software
5
BINDING SITE FOR RESIDUE NA B 1257
Software
7
A
ASN
52
A
ASN
45
17
1_555
A
GLU
56
A
GLU
49
17
1_555
A
ASP
79
A
ASP
72
17
1_555
A
ARG
82
A
ARG
75
17
1_555
A
GLY
83
A
GLY
76
17
1_555
A
ILE
84
A
ILE
77
17
1_555
A
PRO
85
A
PRO
78
17
1_555
A
ASP
97
A
ASP
90
17
1_555
A
GLN
102
A
GLN
95
17
1_555
A
SER
126
A
SER
99
17
1_555
A
THR
169
A
THR
142
17
1_555
A
HOH
2007
G
HOH
17
1_555
A
HOH
2020
G
HOH
17
1_555
A
HOH
2030
G
HOH
17
1_555
B
GLN
195
B
GLN
168
17
1_555
B
PHE
199
B
PHE
172
17
1_555
B
TYR
253
B
TYR
194
17
1_555
A
GLN
195
A
GLN
168
17
5_445
A
TYR
253
A
TYR
194
17
5_445
B
GLU
48
B
GLU
41
17
1_555
B
ASN
52
B
ASN
45
17
1_555
B
GLU
56
B
GLU
49
17
1_555
B
ASP
79
B
ASP
72
17
1_555
B
ARG
82
B
ARG
75
17
1_555
B
GLY
83
B
GLY
76
17
1_555
B
ILE
84
B
ILE
77
17
1_555
B
PRO
85
B
PRO
78
17
1_555
B
THR
95
B
THR
88
17
1_555
B
VAL
99
B
VAL
92
17
1_555
B
MET
100
B
MET
93
17
1_555
B
SER
126
B
SER
99
17
1_555
B
HOH
2004
H
HOH
17
1_555
B
HOH
2019
H
HOH
17
1_555
B
HOH
2034
H
HOH
17
1_555
A
ASP
80
A
ASP
73
5
1_555
A
GLY
81
A
GLY
74
5
1_555
A
THR
167
A
THR
140
5
1_555
A
HOH
2041
G
HOH
5
1_555
A
HOH
2042
G
HOH
5
1_555
B
ASP
80
B
ASP
73
7
1_555
B
GLY
81
B
GLY
74
7
1_555
B
THR
167
B
THR
140
7
1_555
B
HOH
2010
H
HOH
7
1_555
B
HOH
2011
H
HOH
7
1_555
B
HOH
2043
H
HOH
7
1_555
B
HOH
2044
H
HOH
7
1_555
20
C 2 2 21