1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Osborne, M.J. Volpon, L. Kornblatt, J.A. Culjkovic-Kraljcic, B. Baguet, A. Borden, K.L.B. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Proc.Natl.Acad.Sci.USA PNASA6 0040 0027-8424 110 3877 10.1073/PNAS.1216862110 23431134 Eif4E3 Acts as a Tumor Suppressor by Utilizing an Atypical Mode of Methyl-7-Guanosine CAP Recognition. 2013 10.2210/pdb4b6v/pdb pdb_00004b6v 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 22864.070 EUKARYOTIC TRANSLATION INITIATION FACTOR 4E TYPE 3 1 man polymer EIF4E3, EIF-4E TYPE 3, EIF-4E3, EIF4E TYPE 3, EIF4E-3 no no MALPPAAAPPGANEPLDKALSALPPEPGGVPLHSPWTFWLDRSLPGATAAECASNLKKIYTVQTVQIFWSVYNNIPPVTS LPLRCSYHLMRGERRPLWEEESNAKGGVWKMKVPKDSTSTVWKELLLATIGEQFTDCAAADDEIIGVSVSVRDREDVVQV WNVNASLVGEATVLEKIHQLLPHIAFKAVFYKPHEEHHAFEGGRGKH MALPPAAAPPGANEPLDKALSALPPEPGGVPLHSPWTFWLDRSLPGATAAECASNLKKIYTVQTVQIFWSVYNNIPPVTS LPLRCSYHLMRGERRPLWEEESNAKGGVWKMKVPKDSTSTVWKELLLATIGEQFTDCAAADDEIIGVSVSVRDREDVVQV WNVNASLVGEATVLEKIHQLLPHIAFKAVFYKPHEEHHAFEGGRGKH A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n HOUSE MOUSE sample 10090 MUS MUSCULUS 469008 ESCHERICHIA COLI BL21(DE3) PET-15B PLASMID database_2 pdbx_database_status pdbx_nmr_software repository Initial release Database references Atomic model Other Data collection Database references Other 1 0 2013-02-27 1 1 2013-03-20 1 2 2016-05-04 1 3 2023-06-14 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.status_code_cs _pdbx_database_status.status_code_mr _pdbx_database_status.status_code_nmr_data _pdbx_nmr_software.name SOLUTION STRUCTURE OF EIF4E3 IN COMPLEX WITH M7GDP PDBE Y PDBE 2012-08-15 REL REL REL REL NONE LEAST RESTRAINT VIOLATION 100 10 NOESY 100 mM 7.3 pH 1.0 atm 293.0 K XPLOR 1 50MM PHOSPHATE, 100MM NACL, 100UM TCEP, NAN3, 7% D2O BRUNGER refinement X-PLOR structure solution Sparky 800 Varian INOVA MET 1 n 1 MET 1 A ALA 2 n 2 ALA 2 A LEU 3 n 3 LEU 3 A PRO 4 n 4 PRO 4 A PRO 5 n 5 PRO 5 A ALA 6 n 6 ALA 6 A ALA 7 n 7 ALA 7 A ALA 8 n 8 ALA 8 A PRO 9 n 9 PRO 9 A PRO 10 n 10 PRO 10 A GLY 11 n 11 GLY 11 A ALA 12 n 12 ALA 12 A ASN 13 n 13 ASN 13 A GLU 14 n 14 GLU 14 A PRO 15 n 15 PRO 15 A LEU 16 n 16 LEU 16 A ASP 17 n 17 ASP 17 A LYS 18 n 18 LYS 18 A ALA 19 n 19 ALA 19 A LEU 20 n 20 LEU 20 A SER 21 n 21 SER 21 A ALA 22 n 22 ALA 22 A LEU 23 n 23 LEU 23 A PRO 24 n 24 PRO 24 A PRO 25 n 25 PRO 25 A GLU 26 n 26 GLU 26 A PRO 27 n 27 PRO 27 A GLY 28 n 28 GLY 28 A GLY 29 n 29 GLY 29 A VAL 30 n 30 VAL 30 A PRO 31 n 31 PRO 31 A LEU 32 n 32 LEU 32 A HIS 33 n 33 HIS 33 A SER 34 n 34 SER 34 A PRO 35 n 35 PRO 35 A TRP 36 n 36 TRP 36 A THR 37 n 37 THR 37 A PHE 38 n 38 PHE 38 A TRP 39 n 39 TRP 39 A LEU 40 n 40 LEU 40 A ASP 41 n 41 ASP 41 A ARG 42 n 42 ARG 42 A SER 43 n 43 SER 43 A LEU 44 n 44 LEU 44 A PRO 45 n 45 PRO 45 A GLY 46 n 46 GLY 46 A ALA 47 n 47 ALA 47 A THR 48 n 48 THR 48 A ALA 49 n 49 ALA 49 A ALA 50 n 50 ALA 50 A GLU 51 n 51 GLU 51 A CYS 52 n 52 CYS 52 A ALA 53 n 53 ALA 53 A SER 54 n 54 SER 54 A ASN 55 n 55 ASN 55 A LEU 56 n 56 LEU 56 A LYS 57 n 57 LYS 57 A LYS 58 n 58 LYS 58 A ILE 59 n 59 ILE 59 A TYR 60 n 60 TYR 60 A THR 61 n 61 THR 61 A VAL 62 n 62 VAL 62 A GLN 63 n 63 GLN 63 A THR 64 n 64 THR 64 A VAL 65 n 65 VAL 65 A GLN 66 n 66 GLN 66 A ILE 67 n 67 ILE 67 A PHE 68 n 68 PHE 68 A TRP 69 n 69 TRP 69 A SER 70 n 70 SER 70 A VAL 71 n 71 VAL 71 A TYR 72 n 72 TYR 72 A ASN 73 n 73 ASN 73 A ASN 74 n 74 ASN 74 A ILE 75 n 75 ILE 75 A PRO 76 n 76 PRO 76 A PRO 77 n 77 PRO 77 A VAL 78 n 78 VAL 78 A THR 79 n 79 THR 79 A SER 80 n 80 SER 80 A LEU 81 n 81 LEU 81 A PRO 82 n 82 PRO 82 A LEU 83 n 83 LEU 83 A ARG 84 n 84 ARG 84 A CYS 85 n 85 CYS 85 A SER 86 n 86 SER 86 A TYR 87 n 87 TYR 87 A HIS 88 n 88 HIS 88 A LEU 89 n 89 LEU 89 A MET 90 n 90 MET 90 A ARG 91 n 91 ARG 91 A GLY 92 n 92 GLY 92 A GLU 93 n 93 GLU 93 A ARG 94 n 94 ARG 94 A ARG 95 n 95 ARG 95 A PRO 96 n 96 PRO 96 A LEU 97 n 97 LEU 97 A TRP 98 n 98 TRP 98 A GLU 99 n 99 GLU 99 A GLU 100 n 100 GLU 100 A GLU 101 n 101 GLU 101 A SER 102 n 102 SER 102 A ASN 103 n 103 ASN 103 A ALA 104 n 104 ALA 104 A LYS 105 n 105 LYS 105 A GLY 106 n 106 GLY 106 A GLY 107 n 107 GLY 107 A VAL 108 n 108 VAL 108 A TRP 109 n 109 TRP 109 A LYS 110 n 110 LYS 110 A MET 111 n 111 MET 111 A LYS 112 n 112 LYS 112 A VAL 113 n 113 VAL 113 A PRO 114 n 114 PRO 114 A LYS 115 n 115 LYS 115 A ASP 116 n 116 ASP 116 A SER 117 n 117 SER 117 A THR 118 n 118 THR 118 A SER 119 n 119 SER 119 A THR 120 n 120 THR 120 A VAL 121 n 121 VAL 121 A TRP 122 n 122 TRP 122 A LYS 123 n 123 LYS 123 A GLU 124 n 124 GLU 124 A LEU 125 n 125 LEU 125 A LEU 126 n 126 LEU 126 A LEU 127 n 127 LEU 127 A ALA 128 n 128 ALA 128 A THR 129 n 129 THR 129 A ILE 130 n 130 ILE 130 A GLY 131 n 131 GLY 131 A GLU 132 n 132 GLU 132 A GLN 133 n 133 GLN 133 A PHE 134 n 134 PHE 134 A THR 135 n 135 THR 135 A ASP 136 n 136 ASP 136 A CYS 137 n 137 CYS 137 A ALA 138 n 138 ALA 138 A ALA 139 n 139 ALA 139 A ALA 140 n 140 ALA 140 A ASP 141 n 141 ASP 141 A ASP 142 n 142 ASP 142 A GLU 143 n 143 GLU 143 A ILE 144 n 144 ILE 144 A ILE 145 n 145 ILE 145 A GLY 146 n 146 GLY 146 A VAL 147 n 147 VAL 147 A SER 148 n 148 SER 148 A VAL 149 n 149 VAL 149 A SER 150 n 150 SER 150 A VAL 151 n 151 VAL 151 A ARG 152 n 152 ARG 152 A ASP 153 n 153 ASP 153 A ARG 154 n 154 ARG 154 A GLU 155 n 155 GLU 155 A ASP 156 n 156 ASP 156 A VAL 157 n 157 VAL 157 A VAL 158 n 158 VAL 158 A GLN 159 n 159 GLN 159 A VAL 160 n 160 VAL 160 A TRP 161 n 161 TRP 161 A ASN 162 n 162 ASN 162 A VAL 163 n 163 VAL 163 A ASN 164 n 164 ASN 164 A ALA 165 n 165 ALA 165 A SER 166 n 166 SER 166 A LEU 167 n 167 LEU 167 A VAL 168 n 168 VAL 168 A GLY 169 n 169 GLY 169 A GLU 170 n 170 GLU 170 A ALA 171 n 171 ALA 171 A THR 172 n 172 THR 172 A VAL 173 n 173 VAL 173 A LEU 174 n 174 LEU 174 A GLU 175 n 175 GLU 175 A LYS 176 n 176 LYS 176 A ILE 177 n 177 ILE 177 A HIS 178 n 178 HIS 178 A GLN 179 n 179 GLN 179 A LEU 180 n 180 LEU 180 A LEU 181 n 181 LEU 181 A PRO 182 n 182 PRO 182 A HIS 183 n 183 HIS 183 A ILE 184 n 184 ILE 184 A ALA 185 n 185 ALA 185 A PHE 186 n 186 PHE 186 A LYS 187 n 187 LYS 187 A ALA 188 n 188 ALA 188 A VAL 189 n 189 VAL 189 A PHE 190 n 190 PHE 190 A TYR 191 n 191 TYR 191 A LYS 192 n 192 LYS 192 A PRO 193 n 193 PRO 193 A HIS 194 n 194 HIS 194 A GLU 195 n 195 GLU 195 A GLU 196 n 196 GLU 196 A HIS 197 n 197 HIS 197 A HIS 198 n 198 HIS 198 A ALA 199 n 199 ALA 199 A PHE 200 n 200 PHE 200 A GLU 201 n 201 GLU 201 A GLY 202 n 202 GLY 202 A GLY 203 n 203 GLY 203 A ARG 204 n 204 ARG 204 A GLY 205 n 205 GLY 205 A LYS 206 n 206 LYS 206 A HIS 207 n 207 HIS 207 A software_defined_assembly PISA 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O GLN 63 A O GLN 63 A N LEU 32 A N LEU 32 A N ASP 41 A N ASP 41 A O SER 86 A O SER 86 A N LEU 89 A N LEU 89 A O VAL 147 A O VAL 147 A N SER 150 A N SER 150 A O VAL 157 A O VAL 157 A N ASN 162 A N ASN 162 A O GLY 107 A O GLY 107 A N LYS 110 A N LYS 110 A O PHE 190 A O PHE 190 6 A A O H LYS ALA 105 165 1.59 10 A A O H LYS ALA 105 165 1.58 1 A LEU 3 54.38 83.38 1 A ALA 6 61.83 112.20 1 A GLU 14 56.33 167.99 1 A PRO 25 -82.40 32.60 1 A GLU 26 -47.74 159.96 1 A LEU 44 -100.12 -61.69 1 A ASN 55 -87.48 44.80 1 A TYR 60 179.29 162.89 1 A LEU 83 -177.10 -35.58 1 A ARG 84 -81.88 48.57 1 A CYS 85 -172.35 105.84 1 A GLU 93 -56.71 102.88 1 A TRP 98 38.66 31.12 1 A GLU 170 -101.37 45.45 1 A ARG 204 42.31 91.96 2 A LEU 3 62.88 81.74 2 A ALA 7 56.85 -77.77 2 A ALA 8 -114.09 72.72 2 A ASN 13 56.08 96.04 2 A LYS 18 67.66 -62.86 2 A ALA 22 -151.31 86.46 2 A PRO 25 -84.54 32.39 2 A GLU 26 -47.08 155.10 2 A ASN 55 -92.40 34.93 2 A LEU 83 179.11 142.04 2 A GLU 93 -53.63 107.37 2 A PRO 96 -79.99 -161.53 2 A GLU 155 -161.76 -156.44 2 A GLU 170 -105.25 44.42 2 A HIS 198 -168.53 -65.47 2 A LYS 206 49.52 -176.97 3 A LEU 3 53.23 82.59 3 A ASN 13 59.18 -84.00 3 A GLU 14 -171.66 142.38 3 A ALA 22 -153.21 82.96 3 A PRO 25 -78.97 33.73 3 A GLU 26 -47.67 158.11 3 A ALA 47 75.79 46.47 3 A ASN 55 -91.84 43.81 3 A TYR 60 176.15 167.67 3 A LEU 83 176.30 136.13 3 A ARG 84 71.77 32.56 3 A GLU 93 -53.77 94.71 3 A LEU 97 -114.06 73.55 3 A ASN 103 -130.25 -37.44 3 A GLU 170 -101.58 44.67 3 A LEU 181 -140.30 56.92 3 A GLU 195 -142.64 16.66 3 A HIS 198 59.44 82.96 4 A ALA 8 178.45 77.06 4 A GLU 14 -175.19 -58.89 4 A SER 43 56.68 -167.17 4 A LEU 44 146.67 -61.04 4 A LEU 83 178.96 -30.16 4 A ARG 84 -84.40 40.98 4 A CYS 85 -167.62 115.41 4 A GLU 93 -55.90 93.34 4 A ALA 199 -167.61 45.74 5 A ALA 2 -108.34 79.95 5 A LEU 16 -155.98 -68.16 5 A ALA 22 -154.92 86.78 5 A GLU 26 -46.51 162.03 5 A TYR 60 177.87 165.30 5 A LEU 83 -177.27 142.34 5 A GLU 93 -52.19 109.43 5 A PRO 96 -70.63 -163.77 5 A TRP 98 36.66 32.72 5 A ASN 103 -133.80 -37.49 5 A ALA 139 -49.55 153.19 5 A GLU 155 -162.97 -158.54 5 A GLU 170 -102.67 51.51 5 A LEU 181 -147.71 57.93 5 A HIS 198 -173.50 38.73 5 A GLU 201 57.99 95.60 6 A ALA 6 67.08 -61.35 6 A ALA 8 -171.67 80.03 6 A ALA 12 -171.79 -46.53 6 A ASN 13 61.46 135.46 6 A LYS 18 60.99 -71.56 6 A ALA 22 -151.29 83.64 6 A PRO 25 -82.88 32.45 6 A GLU 26 -47.66 156.69 6 A SER 43 -100.02 79.65 6 A ALA 47 74.65 44.78 6 A ASN 55 -94.39 43.73 6 A TYR 60 169.97 167.70 6 A PRO 82 -80.79 47.74 6 A LEU 83 58.08 146.12 6 A GLU 93 -53.15 94.35 6 A LEU 97 -103.45 79.86 6 A GLU 170 -106.60 47.06 6 A HIS 198 -157.37 -58.48 6 A ALA 199 -134.53 -61.17 6 A GLU 201 58.31 -77.33 6 A LYS 206 51.42 75.06 7 A LEU 3 -179.30 -59.12 7 A ALA 6 66.56 -63.25 7 A ALA 12 58.11 174.76 7 A ASP 17 49.91 90.37 7 A ALA 22 -153.71 85.62 7 A PRO 25 -80.62 33.04 7 A GLU 26 -48.86 156.55 7 A ASN 55 -96.87 42.07 7 A LEU 83 -173.30 -32.72 7 A CYS 85 -172.47 102.70 7 A LEU 97 -108.47 77.50 7 A GLU 170 -101.93 45.06 7 A HIS 198 63.20 -69.56 7 A ALA 199 55.71 177.20 8 A LEU 3 54.88 83.34 8 A ALA 6 52.55 174.68 8 A ASP 17 -118.23 -81.31 8 A PRO 25 -83.43 33.07 8 A GLU 26 -46.70 156.94 8 A LEU 44 -59.39 174.22 8 A ALA 47 54.33 -171.77 8 A TYR 60 175.38 175.81 8 A PRO 82 -78.59 49.18 8 A LEU 83 58.04 148.09 8 A GLU 93 -53.65 95.30 8 A PRO 96 -75.51 -166.62 8 A GLU 155 -153.78 -159.75 9 A ALA 8 62.82 70.51 9 A ASP 17 -130.49 -70.24 9 A PRO 25 -84.47 31.78 9 A ASN 55 -96.61 35.46 9 A LEU 81 -52.74 108.24 9 A ARG 84 170.89 47.46 9 A CYS 85 -171.42 113.13 9 A GLU 155 -155.52 -158.03 9 A PHE 200 57.94 132.62 9 A LYS 206 57.24 -84.34 10 A LEU 3 -107.27 79.29 10 A ALA 7 56.05 116.80 10 A ALA 8 -109.30 78.29 10 A GLU 14 173.50 -55.98 10 A ASP 17 -165.23 -80.59 10 A PRO 25 -83.88 31.90 10 A GLU 26 -48.89 165.29 10 A LEU 44 -125.43 -66.02 10 A ALA 47 158.70 -47.49 10 A ASN 55 -92.01 50.25 10 A LEU 83 -174.24 -29.03 10 A ARG 84 -84.39 36.34 10 A CYS 85 -160.81 113.52 10 A GLU 93 -55.59 88.66 10 A LEU 97 -103.43 77.73 10 A GLU 170 -101.07 41.20 The third member of the eIF4E family represses gene expression via a novel mode of recognition of the methyl-7 guanosine cap moiety 1 N N A ASP 17 A ASP 17 HELX_P A ALA 22 A ALA 22 1 1 6 A THR 48 A THR 48 HELX_P A ASN 55 A ASN 55 1 2 8 A VAL 65 A VAL 65 HELX_P A ILE 75 A ILE 75 1 3 11 A PRO 77 A PRO 77 HELX_P A LEU 81 A LEU 81 5 4 5 A GLU 100 A GLU 100 HELX_P A GLY 106 A GLY 106 1 5 7 A PRO 114 A PRO 114 HELX_P A ASP 116 A ASP 116 5 6 3 A SER 117 A SER 117 HELX_P A GLY 131 A GLY 131 1 7 15 A GLU 132 A GLU 132 HELX_P A ALA 138 A ALA 138 1 8 7 A THR 172 A THR 172 HELX_P A LEU 181 A LEU 181 1 9 10 TRANSLATION TRANSLATION, M7G CAP IF4E3_MOUSE UNP 1 Q9DBB5 1 207 4B6V 1 207 Q9DBB5 A 1 1 207 7 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A LEU 56 A LEU 56 A THR 64 A THR 64 A PRO 31 A PRO 31 A ASP 41 A ASP 41 A SER 86 A SER 86 A MET 90 A MET 90 A ILE 144 A ILE 144 A VAL 151 A VAL 151 A ASP 156 A ASP 156 A ASN 162 A ASN 162 A GLY 107 A GLY 107 A VAL 113 A VAL 113 A VAL 189 A VAL 189 A PRO 193 A PRO 193 1 P 1