0.012860
0.000000
0.000000
0.000000
0.012860
0.000000
0.000000
0.000000
0.026388
0.00000
0.00000
0.00000
Talon, R.
Kahn, R.
Gautier, A.
Nauton, L.
Girard, E.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
77.763
77.763
37.896
C2 H3 O2 -1
59.044
ACETATE ION
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Cl -1
35.453
CHLORIDE ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
Eu 3
151.964
EUROPIUM (III) ION
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C11 H12 N4 O5
280.237
4-(4-(2-hydroxyethyl)-1H-1,2,3-triazol-1-yl)pyridine-2,6-dicarboxylic acid
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Na 1
22.990
SODIUM ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
Chem.Commun.(Camb.)
1359-7345
48
11886
10.1039/C2CC36982F
23123834
Clicked Europium Dipicolinate Complexes for Protein X-Ray Structure Determination.
2012
GE
Angew.Chem.Int.Ed.Engl.
9999
1433-7851
47
3388
10.1002/ANIE.200704683
18350532
Protein Crystallography Through Supramolecular Interactions between a Lanthanide Complex and Arginine.
2008
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
66
762
10.1107/S0907444910010954
20606256
A Dipicolinate Lanthanide Complex for Solving Protein Structures Using Anomalous Diffraction.
2010
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
58
1
10.1107/S0907444901016444
11752774
Gd-Hpdo3A, a Complex to Obtain High-Phasing-Power Heavy-Atom Derivatives for Sad and MAD Experiments: Results with Tetragonal Hen Egg-White Lysozyme.
2002
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
MIRRORS
CCD
2009-11-06
ADSC CCD
EITHER SI111 OR SI311 CRYSTALS
MAD
M
x-ray
1
0.979
1.0
BM30A
ESRF
0.979
SYNCHROTRON
ESRF BEAMLINE BM30A
14331.160
LYSOZYME C
3.2.1.17
1
nat
polymer
151.964
EUROPIUM (III) ION
1
syn
non-polymer
280.237
4-(4-(2-hydroxyethyl)-1H-1,2,3-triazol-1-yl)pyridine-2,6-dicarboxylic acid
3
syn
non-polymer
59.044
ACETATE ION
1
syn
non-polymer
35.453
CHLORIDE ION
9
syn
non-polymer
22.990
SODIUM ION
2
syn
non-polymer
18.015
water
148
nat
water
1,4-BETA-N-ACETYLMURAMIDASE C, ALLERGEN GAL D IV, GAL D 4, HEWL, MURAMIDASE, MUCOPEPTIDE N-ACETYLMURAMOYL-HYDROLASE
no
no
KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC
SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL
KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC
SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
CHICKENS, BANTAM
ROCHE APPLIED SCIENCE POWDER, CATALOG NUMBER 10837059001
sample
9031
EGG
GALLUS GALLUS
1
1.68
27
MAD DATA AT TWO WAVELENGTHS WERE COLLECTED. THE FIRST DATA SET AT THE EUROPIUM LIII EDGE AND THE SECOND ONE AT THE SELENIUM K EDGE
4.6
0.1 M SODIUM ACETATE PH 4.6, 0.4-1.5 M SODIUM CHLORIDE, 0.00046 M PROTEIN, 0.001.4 M LANTHANIDE COMPLEX, 293 K, 3-7 DAYS
293
exptl_crystal_grow
pdbx_database_proc
pdbx_database_status
repository
Initial release
Database references
Derived calculations
Database references
Data collection
Experimental preparation
Other
1
0
2012-11-14
1
1
2012-11-28
1
2
2013-05-29
1
3
2015-04-01
1
4
2019-03-06
_exptl_crystal_grow.temp
_pdbx_database_status.recvd_author_approval
CRYSTAL STRUCTURE OF PROTEOLYZED LYSOZYME
X-RAY CRYSTAL STRUCTURE OF HEWL FLASH-COOLED AT HIGH PRESSURE
ASYMMETRIC CRYO-EM RECONSTRUCTION OF E. COLI DEGQ 12- MER IN COMPLEX WITH LYSOZYME
SYMMETRIZED CRYO-EM RECONSTRUCTION OF E. COLI DEGQ 12 -MER IN COMPLEX WITH LYSOZYMES
HOFMEISTER EFFECTS OF IONIC LIQUIDS IN PROTEIN CRYSTALLIZATION: DIRECT AND WATER-MEDIATED INTERACTIONS
CRYSTAL STRUCTURE OF HEN EGG WHITE LYSOZYME FROM AN AUTO HARVESTED CRYSTAL, CONTROL EXPERIMENT
CRYSTAL STRUCTURE OF HEN EGG WHITE LYSOZYME FROM AN AUTO HARVESTED CRYSTAL
CRYSTAL STRUCTURE OF LYSOZYME WITH KEGGIN MOLECULE
1.15 A STRUCTURE OF LYSOZYME CRYSTALLIZED WITHOUT 2- METHYL-2,4-PENTANEDIOL
1.00 A STRUCTURE OF LYSOZYME CRYSTALLIZED WITH (R)-2 -METHYL-2,4-PENTANEDIOL
1.20 A STRUCTURE OF LYSOZYME CRYSTALLIZED WITH (S)-2 -METHYL-2,4-PENTANEDIOL
1.25 A STRUCTURE OF LYSOZYME CRYSTALLIZED WITH (RS)- 2-METHYL-2,4-PENTANEDIOL
HEN EGG-WHITE LYSOZYME STRUCTURE IN COMPLEX WITH THE EUROPIUM TRIS-HYDROXYMETHYLTRIAZOLEDIPICOLINATE COMPLEX AT 1 .35 A RESOLUTION.
PDBE
Y
PDBE
2012-09-14
REL
EU3
EUROPIUM (III) ION
IKX
4-(4-(2-hydroxyethyl)-1H-1,2,3-triazol-1-yl)pyridine-2,6-dicarboxylic acid
ACT
ACETATE ION
CL
CHLORIDE ION
NA
SODIUM ION
HOH
water
THE SEQUENCE PROVIDED CORRESPOND TO THE RESIDUES 19 TO 147,
I.E WITHOUT THE SIGNAL PEPTIDE
EU3
1129
2
EU3
EU3
1129
A
IKX
1130
3
IKX
IKX
1130
A
IKX
1131
3
IKX
IKX
1131
A
IKX
1132
3
IKX
IKX
1132
A
ACT
1133
4
ACT
ACT
1133
A
CL
1134
5
CL
CL
1134
A
CL
1135
5
CL
CL
1135
A
CL
1136
5
CL
CL
1136
A
CL
1137
5
CL
CL
1137
A
CL
1138
5
CL
CL
1138
A
CL
1139
5
CL
CL
1139
A
NA
1140
6
NA
NA
1140
A
NA
1141
6
NA
NA
1141
A
CL
1142
5
CL
CL
1142
A
CL
1143
5
CL
CL
1143
A
CL
1144
5
CL
CL
1144
A
HOH
2001
7
HOH
HOH
2001
A
HOH
2002
7
HOH
HOH
2002
A
HOH
2003
7
HOH
HOH
2003
A
HOH
2004
7
HOH
HOH
2004
A
HOH
2005
7
HOH
HOH
2005
A
HOH
2006
7
HOH
HOH
2006
A
HOH
2007
7
HOH
HOH
2007
A
HOH
2008
7
HOH
HOH
2008
A
HOH
2009
7
HOH
HOH
2009
A
HOH
2010
7
HOH
HOH
2010
A
HOH
2011
7
HOH
HOH
2011
A
HOH
2012
7
HOH
HOH
2012
A
HOH
2013
7
HOH
HOH
2013
A
HOH
2014
7
HOH
HOH
2014
A
HOH
2015
7
HOH
HOH
2015
A
HOH
2016
7
HOH
HOH
2016
A
HOH
2017
7
HOH
HOH
2017
A
HOH
2018
7
HOH
HOH
2018
A
HOH
2019
7
HOH
HOH
2019
A
HOH
2020
7
HOH
HOH
2020
A
HOH
2021
7
HOH
HOH
2021
A
HOH
2022
7
HOH
HOH
2022
A
HOH
2023
7
HOH
HOH
2023
A
HOH
2024
7
HOH
HOH
2024
A
HOH
2025
7
HOH
HOH
2025
A
HOH
2026
7
HOH
HOH
2026
A
HOH
2027
7
HOH
HOH
2027
A
HOH
2028
7
HOH
HOH
2028
A
HOH
2029
7
HOH
HOH
2029
A
HOH
2030
7
HOH
HOH
2030
A
HOH
2031
7
HOH
HOH
2031
A
HOH
2032
7
HOH
HOH
2032
A
HOH
2033
7
HOH
HOH
2033
A
HOH
2034
7
HOH
HOH
2034
A
HOH
2035
7
HOH
HOH
2035
A
HOH
2036
7
HOH
HOH
2036
A
HOH
2037
7
HOH
HOH
2037
A
HOH
2038
7
HOH
HOH
2038
A
HOH
2039
7
HOH
HOH
2039
A
HOH
2040
7
HOH
HOH
2040
A
HOH
2041
7
HOH
HOH
2041
A
HOH
2042
7
HOH
HOH
2042
A
HOH
2043
7
HOH
HOH
2043
A
HOH
2044
7
HOH
HOH
2044
A
HOH
2045
7
HOH
HOH
2045
A
HOH
2046
7
HOH
HOH
2046
A
HOH
2047
7
HOH
HOH
2047
A
HOH
2048
7
HOH
HOH
2048
A
HOH
2049
7
HOH
HOH
2049
A
HOH
2050
7
HOH
HOH
2050
A
HOH
2051
7
HOH
HOH
2051
A
HOH
2052
7
HOH
HOH
2052
A
HOH
2053
7
HOH
HOH
2053
A
HOH
2054
7
HOH
HOH
2054
A
HOH
2055
7
HOH
HOH
2055
A
HOH
2056
7
HOH
HOH
2056
A
HOH
2057
7
HOH
HOH
2057
A
HOH
2058
7
HOH
HOH
2058
A
HOH
2059
7
HOH
HOH
2059
A
HOH
2060
7
HOH
HOH
2060
A
HOH
2061
7
HOH
HOH
2061
A
HOH
2062
7
HOH
HOH
2062
A
HOH
2063
7
HOH
HOH
2063
A
HOH
2064
7
HOH
HOH
2064
A
HOH
2065
7
HOH
HOH
2065
A
HOH
2066
7
HOH
HOH
2066
A
HOH
2067
7
HOH
HOH
2067
A
HOH
2068
7
HOH
HOH
2068
A
HOH
2069
7
HOH
HOH
2069
A
HOH
2070
7
HOH
HOH
2070
A
HOH
2071
7
HOH
HOH
2071
A
HOH
2072
7
HOH
HOH
2072
A
HOH
2073
7
HOH
HOH
2073
A
HOH
2074
7
HOH
HOH
2074
A
HOH
2075
7
HOH
HOH
2075
A
HOH
2076
7
HOH
HOH
2076
A
HOH
2077
7
HOH
HOH
2077
A
HOH
2078
7
HOH
HOH
2078
A
HOH
2079
7
HOH
HOH
2079
A
HOH
2080
7
HOH
HOH
2080
A
HOH
2081
7
HOH
HOH
2081
A
HOH
2082
7
HOH
HOH
2082
A
HOH
2083
7
HOH
HOH
2083
A
HOH
2084
7
HOH
HOH
2084
A
HOH
2085
7
HOH
HOH
2085
A
HOH
2086
7
HOH
HOH
2086
A
HOH
2087
7
HOH
HOH
2087
A
HOH
2088
7
HOH
HOH
2088
A
HOH
2089
7
HOH
HOH
2089
A
HOH
2090
7
HOH
HOH
2090
A
HOH
2091
7
HOH
HOH
2091
A
HOH
2092
7
HOH
HOH
2092
A
HOH
2093
7
HOH
HOH
2093
A
HOH
2094
7
HOH
HOH
2094
A
HOH
2095
7
HOH
HOH
2095
A
HOH
2096
7
HOH
HOH
2096
A
HOH
2097
7
HOH
HOH
2097
A
HOH
2098
7
HOH
HOH
2098
A
HOH
2099
7
HOH
HOH
2099
A
HOH
2100
7
HOH
HOH
2100
A
HOH
2101
7
HOH
HOH
2101
A
HOH
2102
7
HOH
HOH
2102
A
HOH
2103
7
HOH
HOH
2103
A
HOH
2104
7
HOH
HOH
2104
A
HOH
2105
7
HOH
HOH
2105
A
HOH
2106
7
HOH
HOH
2106
A
HOH
2107
7
HOH
HOH
2107
A
HOH
2108
7
HOH
HOH
2108
A
HOH
2109
7
HOH
HOH
2109
A
HOH
2110
7
HOH
HOH
2110
A
HOH
2111
7
HOH
HOH
2111
A
HOH
2112
7
HOH
HOH
2112
A
HOH
2113
7
HOH
HOH
2113
A
HOH
2114
7
HOH
HOH
2114
A
HOH
2115
7
HOH
HOH
2115
A
HOH
2116
7
HOH
HOH
2116
A
HOH
2117
7
HOH
HOH
2117
A
HOH
2118
7
HOH
HOH
2118
A
HOH
2119
7
HOH
HOH
2119
A
HOH
2120
7
HOH
HOH
2120
A
HOH
2121
7
HOH
HOH
2121
A
HOH
2122
7
HOH
HOH
2122
A
HOH
2123
7
HOH
HOH
2123
A
HOH
2124
7
HOH
HOH
2124
A
HOH
2125
7
HOH
HOH
2125
A
HOH
2126
7
HOH
HOH
2126
A
HOH
2127
7
HOH
HOH
2127
A
HOH
2128
7
HOH
HOH
2128
A
HOH
2129
7
HOH
HOH
2129
A
HOH
2130
7
HOH
HOH
2130
A
HOH
2131
7
HOH
HOH
2131
A
HOH
2132
7
HOH
HOH
2132
A
HOH
2133
7
HOH
HOH
2133
A
HOH
2134
7
HOH
HOH
2134
A
HOH
2135
7
HOH
HOH
2135
A
HOH
2136
7
HOH
HOH
2136
A
HOH
2137
7
HOH
HOH
2137
A
HOH
2138
7
HOH
HOH
2138
A
HOH
2139
7
HOH
HOH
2139
A
HOH
2140
7
HOH
HOH
2140
A
HOH
2141
7
HOH
HOH
2141
A
HOH
2142
7
HOH
HOH
2142
A
HOH
2143
7
HOH
HOH
2143
A
HOH
2144
7
HOH
HOH
2144
A
HOH
2145
7
HOH
HOH
2145
A
HOH
2146
7
HOH
HOH
2146
A
HOH
2147
7
HOH
HOH
2147
A
HOH
2148
7
HOH
HOH
2148
A
LYS
1
n
1
LYS
1
A
VAL
2
n
2
VAL
2
A
PHE
3
n
3
PHE
3
A
GLY
4
n
4
GLY
4
A
ARG
5
n
5
ARG
5
A
CYS
6
n
6
CYS
6
A
GLU
7
n
7
GLU
7
A
LEU
8
n
8
LEU
8
A
ALA
9
n
9
ALA
9
A
ALA
10
n
10
ALA
10
A
ALA
11
n
11
ALA
11
A
MET
12
n
12
MET
12
A
LYS
13
n
13
LYS
13
A
ARG
14
n
14
ARG
14
A
HIS
15
n
15
HIS
15
A
GLY
16
n
16
GLY
16
A
LEU
17
n
17
LEU
17
A
ASP
18
n
18
ASP
18
A
ASN
19
n
19
ASN
19
A
TYR
20
n
20
TYR
20
A
ARG
21
n
21
ARG
21
A
GLY
22
n
22
GLY
22
A
TYR
23
n
23
TYR
23
A
SER
24
n
24
SER
24
A
LEU
25
n
25
LEU
25
A
GLY
26
n
26
GLY
26
A
ASN
27
n
27
ASN
27
A
TRP
28
n
28
TRP
28
A
VAL
29
n
29
VAL
29
A
CYS
30
n
30
CYS
30
A
ALA
31
n
31
ALA
31
A
ALA
32
n
32
ALA
32
A
LYS
33
n
33
LYS
33
A
PHE
34
n
34
PHE
34
A
GLU
35
n
35
GLU
35
A
SER
36
n
36
SER
36
A
ASN
37
n
37
ASN
37
A
PHE
38
n
38
PHE
38
A
ASN
39
n
39
ASN
39
A
THR
40
n
40
THR
40
A
GLN
41
n
41
GLN
41
A
ALA
42
n
42
ALA
42
A
THR
43
n
43
THR
43
A
ASN
44
n
44
ASN
44
A
ARG
45
n
45
ARG
45
A
ASN
46
n
46
ASN
46
A
THR
47
n
47
THR
47
A
ASP
48
n
48
ASP
48
A
GLY
49
n
49
GLY
49
A
SER
50
n
50
SER
50
A
THR
51
n
51
THR
51
A
ASP
52
n
52
ASP
52
A
TYR
53
n
53
TYR
53
A
GLY
54
n
54
GLY
54
A
ILE
55
n
55
ILE
55
A
LEU
56
n
56
LEU
56
A
GLN
57
n
57
GLN
57
A
ILE
58
n
58
ILE
58
A
ASN
59
n
59
ASN
59
A
SER
60
n
60
SER
60
A
ARG
61
n
61
ARG
61
A
TRP
62
n
62
TRP
62
A
TRP
63
n
63
TRP
63
A
CYS
64
n
64
CYS
64
A
ASN
65
n
65
ASN
65
A
ASP
66
n
66
ASP
66
A
GLY
67
n
67
GLY
67
A
ARG
68
n
68
ARG
68
A
THR
69
n
69
THR
69
A
PRO
70
n
70
PRO
70
A
GLY
71
n
71
GLY
71
A
SER
72
n
72
SER
72
A
ARG
73
n
73
ARG
73
A
ASN
74
n
74
ASN
74
A
LEU
75
n
75
LEU
75
A
CYS
76
n
76
CYS
76
A
ASN
77
n
77
ASN
77
A
ILE
78
n
78
ILE
78
A
PRO
79
n
79
PRO
79
A
CYS
80
n
80
CYS
80
A
SER
81
n
81
SER
81
A
ALA
82
n
82
ALA
82
A
LEU
83
n
83
LEU
83
A
LEU
84
n
84
LEU
84
A
SER
85
n
85
SER
85
A
SER
86
n
86
SER
86
A
ASP
87
n
87
ASP
87
A
ILE
88
n
88
ILE
88
A
THR
89
n
89
THR
89
A
ALA
90
n
90
ALA
90
A
SER
91
n
91
SER
91
A
VAL
92
n
92
VAL
92
A
ASN
93
n
93
ASN
93
A
CYS
94
n
94
CYS
94
A
ALA
95
n
95
ALA
95
A
LYS
96
n
96
LYS
96
A
LYS
97
n
97
LYS
97
A
ILE
98
n
98
ILE
98
A
VAL
99
n
99
VAL
99
A
SER
100
n
100
SER
100
A
ASP
101
n
101
ASP
101
A
GLY
102
n
102
GLY
102
A
ASN
103
n
103
ASN
103
A
GLY
104
n
104
GLY
104
A
MET
105
n
105
MET
105
A
ASN
106
n
106
ASN
106
A
ALA
107
n
107
ALA
107
A
TRP
108
n
108
TRP
108
A
VAL
109
n
109
VAL
109
A
ALA
110
n
110
ALA
110
A
TRP
111
n
111
TRP
111
A
ARG
112
n
112
ARG
112
A
ASN
113
n
113
ASN
113
A
ARG
114
n
114
ARG
114
A
CYS
115
n
115
CYS
115
A
LYS
116
n
116
LYS
116
A
GLY
117
n
117
GLY
117
A
THR
118
n
118
THR
118
A
ASP
119
n
119
ASP
119
A
VAL
120
n
120
VAL
120
A
GLN
121
n
121
GLN
121
A
ALA
122
n
122
ALA
122
A
TRP
123
n
123
TRP
123
A
ILE
124
n
124
ILE
124
A
ARG
125
n
125
ARG
125
A
GLY
126
n
126
GLY
126
A
CYS
127
n
127
CYS
127
A
ARG
128
n
128
ARG
128
A
LEU
129
n
129
LEU
129
A
1.4570
0.3109
0.3334
0.9933
0.2701
0.7808
-0.0960
0.0192
0.1398
-0.1084
0.0505
0.0634
-0.1073
-0.0353
0.0380
0.1120
-0.0090
-0.0241
0.0861
0.0211
0.1101
refined
20.1386
5.3972
4.6033
X-RAY DIFFRACTION
1.7656
-0.0522
-0.0542
1.6608
0.2903
1.1295
-0.0371
-0.2777
-0.1520
0.2102
-0.0147
0.0315
0.0525
0.1567
0.0202
0.1344
-0.0194
-0.0088
0.1306
0.0334
0.1166
refined
15.3194
-7.0669
17.7943
X-RAY DIFFRACTION
1.9150
0.1300
0.0548
0.8553
0.4592
0.8702
0.0004
-0.0619
0.0877
-0.0006
0.0079
0.0318
0.0335
-0.0042
-0.0122
0.1121
-0.0009
-0.0024
0.0858
0.0179
0.0963
refined
23.8271
2.7874
11.1114
X-RAY DIFFRACTION
2.6884
-1.5417
0.9694
4.5335
-1.5962
2.7783
-0.0155
0.2683
0.3721
-0.2825
0.0185
0.0326
-0.2958
-0.0978
0.0101
0.2798
-0.0155
-0.0092
0.1800
0.0769
0.1794
refined
23.6749
11.9627
-3.9767
X-RAY DIFFRACTION
0.3757
0.6324
0.4654
1.1653
0.4604
1.5878
0.0532
0.1733
0.0232
-0.1549
-0.0637
0.0279
0.1148
0.0397
-0.0034
0.1426
-0.0039
-0.0096
0.1711
0.0077
0.0567
refined
22.7704
1.3460
-9.2033
X-RAY DIFFRACTION
2.2015
1.7153
-1.6320
3.5974
-3.2675
3.3405
-0.1059
0.8159
-1.2030
-0.1134
-0.2568
1.7101
0.8869
-1.3833
0.3666
0.3550
-0.0987
0.0124
0.4006
-0.0087
0.2817
refined
21.9927
-2.9581
15.4704
X-RAY DIFFRACTION
X-RAY DIFFRACTION
1
(CHAIN A AND RESID 1:43)
X-RAY DIFFRACTION
2
(CHAIN A AND RESID 44:82)
X-RAY DIFFRACTION
3
(CHAIN A AND RESID 83:122)
X-RAY DIFFRACTION
4
(CHAIN A AND RESID 123:129)
X-RAY DIFFRACTION
5
(CHAIN A AND RESID 1130:1132)
X-RAY DIFFRACTION
6
(CHAIN A AND RESID 1133)
author_and_software_defined_assembly
PISA
1
monomeric
A
IKX
1130
C
O1
IKX
1_555
A
EU3
1129
B
EU
EU3
1_555
A
IKX
1130
C
N1
IKX
1_555
63.1
A
IKX
1130
C
O1
IKX
1_555
A
EU3
1129
B
EU
EU3
1_555
A
IKX
1130
C
O4
IKX
1_555
127.1
A
IKX
1130
C
N1
IKX
1_555
A
EU3
1129
B
EU
EU3
1_555
A
IKX
1130
C
O4
IKX
1_555
64.1
A
IKX
1130
C
O1
IKX
1_555
A
EU3
1129
B
EU
EU3
1_555
A
IKX
1131
D
O1
IKX
1_555
88.1
A
IKX
1130
C
N1
IKX
1_555
A
EU3
1129
B
EU
EU3
1_555
A
IKX
1131
D
O1
IKX
1_555
71.2
A
IKX
1130
C
O4
IKX
1_555
A
EU3
1129
B
EU
EU3
1_555
A
IKX
1131
D
O1
IKX
1_555
78.4
A
IKX
1130
C
O1
IKX
1_555
A
EU3
1129
B
EU
EU3
1_555
A
IKX
1131
D
O4
IKX
1_555
75.4
A
IKX
1130
C
N1
IKX
1_555
A
EU3
1129
B
EU
EU3
1_555
A
IKX
1131
D
O4
IKX
1_555
134.2
A
IKX
1130
C
O4
IKX
1_555
A
EU3
1129
B
EU
EU3
1_555
A
IKX
1131
D
O4
IKX
1_555
149.0
A
IKX
1131
D
O1
IKX
1_555
A
EU3
1129
B
EU
EU3
1_555
A
IKX
1131
D
O4
IKX
1_555
127.9
A
IKX
1130
C
O1
IKX
1_555
A
EU3
1129
B
EU
EU3
1_555
A
IKX
1131
D
N1
IKX
1_555
71.8
A
IKX
1130
C
N1
IKX
1_555
A
EU3
1129
B
EU
EU3
1_555
A
IKX
1131
D
N1
IKX
1_555
115.4
A
IKX
1130
C
O4
IKX
1_555
A
EU3
1129
B
EU
EU3
1_555
A
IKX
1131
D
N1
IKX
1_555
137.5
A
IKX
1131
D
O1
IKX
1_555
A
EU3
1129
B
EU
EU3
1_555
A
IKX
1131
D
N1
IKX
1_555
63.4
A
IKX
1131
D
O4
IKX
1_555
A
EU3
1129
B
EU
EU3
1_555
A
IKX
1131
D
N1
IKX
1_555
64.6
A
IKX
1130
C
O1
IKX
1_555
A
EU3
1129
B
EU
EU3
1_555
A
IKX
1132
E
O1
IKX
1_555
146.7
A
IKX
1130
C
N1
IKX
1_555
A
EU3
1129
B
EU
EU3
1_555
A
IKX
1132
E
O1
IKX
1_555
136.0
A
IKX
1130
C
O4
IKX
1_555
A
EU3
1129
B
EU
EU3
1_555
A
IKX
1132
E
O1
IKX
1_555
79.7
A
IKX
1131
D
O1
IKX
1_555
A
EU3
1129
B
EU
EU3
1_555
A
IKX
1132
E
O1
IKX
1_555
77.9
A
IKX
1131
D
O4
IKX
1_555
A
EU3
1129
B
EU
EU3
1_555
A
IKX
1132
E
O1
IKX
1_555
89.6
A
IKX
1131
D
N1
IKX
1_555
A
EU3
1129
B
EU
EU3
1_555
A
IKX
1132
E
O1
IKX
1_555
74.9
A
IKX
1130
C
O1
IKX
1_555
A
EU3
1129
B
EU
EU3
1_555
A
IKX
1132
E
N1
IKX
1_555
135.4
A
IKX
1130
C
N1
IKX
1_555
A
EU3
1129
B
EU
EU3
1_555
A
IKX
1132
E
N1
IKX
1_555
124.9
A
IKX
1130
C
O4
IKX
1_555
A
EU3
1129
B
EU
EU3
1_555
A
IKX
1132
E
N1
IKX
1_555
75.9
A
IKX
1131
D
O1
IKX
1_555
A
EU3
1129
B
EU
EU3
1_555
A
IKX
1132
E
N1
IKX
1_555
136.3
A
IKX
1131
D
O4
IKX
1_555
A
EU3
1129
B
EU
EU3
1_555
A
IKX
1132
E
N1
IKX
1_555
73.3
A
IKX
1131
D
N1
IKX
1_555
A
EU3
1129
B
EU
EU3
1_555
A
IKX
1132
E
N1
IKX
1_555
119.6
A
IKX
1132
E
O1
IKX
1_555
A
EU3
1129
B
EU
EU3
1_555
A
IKX
1132
E
N1
IKX
1_555
63.3
A
IKX
1130
C
O1
IKX
1_555
A
EU3
1129
B
EU
EU3
1_555
A
IKX
1132
E
O4
IKX
1_555
80.2
A
IKX
1130
C
N1
IKX
1_555
A
EU3
1129
B
EU
EU3
1_555
A
IKX
1132
E
O4
IKX
1_555
75.6
A
IKX
1130
C
O4
IKX
1_555
A
EU3
1129
B
EU
EU3
1_555
A
IKX
1132
E
O4
IKX
1_555
83.9
A
IKX
1131
D
O1
IKX
1_555
A
EU3
1129
B
EU
EU3
1_555
A
IKX
1132
E
O4
IKX
1_555
146.6
A
IKX
1131
D
O4
IKX
1_555
A
EU3
1129
B
EU
EU3
1_555
A
IKX
1132
E
O4
IKX
1_555
79.3
A
IKX
1131
D
N1
IKX
1_555
A
EU3
1129
B
EU
EU3
1_555
A
IKX
1132
E
O4
IKX
1_555
138.5
A
IKX
1132
E
O1
IKX
1_555
A
EU3
1129
B
EU
EU3
1_555
A
IKX
1132
E
O4
IKX
1_555
126.6
A
IKX
1132
E
N1
IKX
1_555
A
EU3
1129
B
EU
EU3
1_555
A
IKX
1132
E
O4
IKX
1_555
63.5
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ASN
44
A
N
ASN
44
A
O
ASP
52
A
O
ASP
52
A
N
TYR
53
A
N
TYR
53
A
O
ILE
58
A
O
ILE
58
1
A
HOH
2065
R
HOH
1
A
HOH
2092
R
HOH
1
A
HOH
2139
R
HOH
1
A
A
O
O
HOH
HOH
2144
2145
1.98
1
A
A
NH1
O
ARG
HOH
68
2076
1.98
A
1
A
A
O3
O
IKX
HOH
1132
2012
2.12
1
A
A
O
O
HOH
HOH
2067
2068
2.13
1
A
A
O
O
HOH
HOH
2011
2147
2.13
1
A
A
O
O
LEU
HOH
129
2138
2.16
A
1
6.92
0.90
118.30
125.22
A
A
A
CB
CG
OD1
ASP
ASP
ASP
18
18
18
N
1
A
A
O
O
HOH
HOH
2068
2068
1.76
1_555
8_555
1
A
A
O
O
HOH
HOH
2018
2018
2.09
1_555
7_555
1
A
A
O
O
HOH
HOH
2016
2056
2.10
1_555
4_555
1
A
ARG
68
-140.67
28.38
15.87
-0.3980
0.0000
0.0000
-0.3980
0.0000
0.7960
LIGAND OCCUPANCIES WERE FIXED ACCORDING TO THE ANTHANIDE ION OCCUPANCY
0.1792
0.1564
0.1576
1.507
31.203
963
18848
5.1
99.66
0.29
1
1.38
MAD
13.38
0.83
1.10
NONE
ML
FLAT BULK SOLVENT MODEL
52.575
0.449
1.507
31.203
148
1224
76
0
1000
0.011
1144
1.384
1553
26.479
445
0.090
154
0.006
206
0.2182
0.1806
1.5860
136
2447
98.00
0.1753
0.1456
1.6853
137
2505
100.00
0.1525
0.1506
1.8154
138
2527
100.00
0.1791
0.1442
1.9981
142
2530
100.00
0.1880
0.1437
2.2872
148
2546
100.00
0.1838
0.1524
2.8813
137
2592
100.00
0.1744
0.1671
31.2100
125
2738
100.00
13.89
1.51
38.88
4BAF
18899
3.0
0.05
1
10.30
13.6
99.7
0.32
1.51
1.59
2.40
1
12.7
98.0
refinement
PHENIX
(PHENIX.REFINE)
data reduction
XDS
data scaling
SCALA
phasing
SHARP
LYSOZYME C (E.C.3.2.1.17)
Hen egg-white lysozyme structure in complex with the europium tris- hydroxyethyltriazoledipicolinate complex at 1.51 A resolution.
1
N
N
2
N
N
3
N
N
3
N
N
3
N
N
4
N
N
5
N
N
5
N
N
5
N
N
5
N
N
5
N
N
5
N
N
6
N
N
6
N
N
5
N
N
5
N
N
5
N
N
7
N
N
A
GLY
4
A
GLY
4
HELX_P
A
HIS
15
A
HIS
15
1
1
12
A
SER
24
A
SER
24
HELX_P
A
ASN
37
A
ASN
37
1
2
14
A
CYS
80
A
CYS
80
HELX_P
A
SER
85
A
SER
85
5
3
6
A
ILE
88
A
ILE
88
HELX_P
A
SER
100
A
SER
100
1
4
13
A
ASN
103
A
ASN
103
HELX_P
A
ALA
107
A
ALA
107
5
5
5
A
TRP
108
A
TRP
108
HELX_P
A
CYS
115
A
CYS
115
1
6
8
A
ASP
119
A
ASP
119
HELX_P
A
ARG
125
A
ARG
125
5
7
7
disulf
2.039
A
CYS
6
A
SG
CYS
6
1_555
A
CYS
127
A
SG
CYS
127
1_555
disulf
2.043
A
CYS
30
A
SG
CYS
30
1_555
A
CYS
115
A
SG
CYS
115
1_555
disulf
2.032
A
CYS
64
A
SG
CYS
64
1_555
A
CYS
80
A
SG
CYS
80
1_555
disulf
2.045
A
CYS
76
A
SG
CYS
76
1_555
A
CYS
94
A
SG
CYS
94
1_555
metalc
2.518
A
IKX
1130
C
O1
IKX
1_555
A
EU3
1129
B
EU
EU3
1_555
metalc
2.573
A
IKX
1130
C
N1
IKX
1_555
A
EU3
1129
B
EU
EU3
1_555
metalc
2.451
A
IKX
1130
C
O4
IKX
1_555
A
EU3
1129
B
EU
EU3
1_555
metalc
2.567
A
IKX
1131
D
O1
IKX
1_555
A
EU3
1129
B
EU
EU3
1_555
metalc
2.505
A
IKX
1131
D
O4
IKX
1_555
A
EU3
1129
B
EU
EU3
1_555
metalc
2.549
A
IKX
1131
D
N1
IKX
1_555
A
EU3
1129
B
EU
EU3
1_555
metalc
2.523
A
IKX
1132
E
O1
IKX
1_555
A
EU3
1129
B
EU
EU3
1_555
metalc
2.560
A
IKX
1132
E
N1
IKX
1_555
A
EU3
1129
B
EU
EU3
1_555
metalc
2.527
A
IKX
1132
E
O4
IKX
1_555
A
EU3
1129
B
EU
EU3
1_555
HYDROLASE
HYDROLASE, CLICK-CHEMISTRY, ANOMALOUS SCATTERING, DE NOVO PHASING, LANTHANIDE COMPLEX, DIPICOLINATE
LYSC_CHICK
UNP
1
P00698
19
147
4BAF
1
129
P00698
A
1
1
129
3
anti-parallel
anti-parallel
A
THR
43
A
THR
43
A
ARG
45
A
ARG
45
A
THR
51
A
THR
51
A
TYR
53
A
TYR
53
A
ILE
58
A
ILE
58
A
ASN
59
A
ASN
59
BINDING SITE FOR RESIDUE EU3 A 1129
Software
3
BINDING SITE FOR RESIDUE IKX A 1130
Software
12
BINDING SITE FOR RESIDUE IKX A 1131
Software
12
BINDING SITE FOR RESIDUE IKX A 1132
Software
14
BINDING SITE FOR RESIDUE ACT A 1133
Software
8
BINDING SITE FOR RESIDUE CL A 1134
Software
2
BINDING SITE FOR RESIDUE CL A 1135
Software
4
BINDING SITE FOR RESIDUE CL A 1136
Software
3
BINDING SITE FOR RESIDUE CL A 1137
Software
5
BINDING SITE FOR RESIDUE CL A 1138
Software
6
BINDING SITE FOR RESIDUE CL A 1139
Software
5
BINDING SITE FOR RESIDUE NA A 1140
Software
4
BINDING SITE FOR RESIDUE NA A 1141
Software
1
BINDING SITE FOR RESIDUE CL A 1142
Software
1
BINDING SITE FOR RESIDUE CL A 1143
Software
4
BINDING SITE FOR RESIDUE CL A 1144
Software
2
A
IKX
1130
C
IKX
3
1_555
A
IKX
1131
D
IKX
3
1_555
A
IKX
1132
E
IKX
3
1_555
A
LYS
33
A
LYS
33
12
1_555
A
PHE
38
A
PHE
38
12
1_555
A
ASP
101
A
ASP
101
12
1_554
A
GLY
117
A
GLY
117
12
3_544
A
TRP
123
A
TRP
123
12
1_555
A
EU3
1129
B
EU3
12
1_555
A
IKX
1131
D
IKX
12
1_555
A
IKX
1132
E
IKX
12
1_555
A
HOH
2010
R
HOH
12
1_555
A
HOH
2011
R
HOH
12
1_555
A
HOH
2141
R
HOH
12
1_555
A
HOH
2142
R
HOH
12
1_555
A
TRP
62
A
TRP
62
12
1_554
A
TRP
63
A
TRP
63
12
1_554
A
LEU
75
A
LEU
75
12
1_554
A
ASP
101
A
ASP
101
12
1_554
A
ARG
125
A
ARG
125
12
3_544
A
EU3
1129
B
EU3
12
1_555
A
IKX
1130
C
IKX
12
1_555
A
IKX
1132
E
IKX
12
1_555
A
CL
1143
P
CL
12
1_554
A
HOH
2120
R
HOH
12
1_554
A
HOH
2143
R
HOH
12
1_555
A
HOH
2144
R
HOH
12
1_555
A
GLY
4
A
GLY
4
14
1_555
A
ARG
5
A
ARG
5
14
1_555
A
GLU
7
A
GLU
7
14
1_555
A
ARG
14
A
ARG
14
14
7_555
A
LEU
75
A
LEU
75
14
1_554
A
EU3
1129
B
EU3
14
1_555
A
IKX
1130
C
IKX
14
1_555
A
IKX
1131
D
IKX
14
1_555
A
CL
1138
K
CL
14
1_555
A
HOH
2010
R
HOH
14
1_555
A
HOH
2011
R
HOH
14
1_555
A
HOH
2012
R
HOH
14
1_555
A
HOH
2051
R
HOH
14
1_555
A
HOH
2146
R
HOH
14
1_555
A
GLN
57
A
GLN
57
8
1_555
A
ILE
58
A
ILE
58
8
1_555
A
ASN
59
A
ASN
59
8
1_555
A
TRP
63
A
TRP
63
8
1_555
A
ALA
107
A
ALA
107
8
1_555
A
TRP
108
A
TRP
108
8
1_555
A
CL
1143
P
CL
8
1_555
A
HOH
2080
R
HOH
8
1_555
A
TYR
23
A
TYR
23
2
1_555
A
ASN
113
A
ASN
113
2
4_555
A
SER
24
A
SER
24
4
1_555
A
GLY
26
A
GLY
26
4
1_555
A
GLN
121
A
GLN
121
4
1_555
A
NA
1141
N
NA
4
1_555
A
ASN
65
A
ASN
65
3
1_555
A
PRO
79
A
PRO
79
3
1_555
A
NA
1140
M
NA
3
1_555
A
ASN
65
A
ASN
65
5
1_555
A
GLY
67
A
GLY
67
5
1_555
A
ARG
68
A
ARG
68
5
1_555
A
THR
69
A
THR
69
5
1_555
A
HOH
2085
R
HOH
5
1_555
A
GLY
4
A
GLY
4
6
1_555
A
CYS
6
A
CYS
6
6
1_555
A
GLU
7
A
GLU
7
6
1_555
A
IKX
1132
E
IKX
6
1_555
A
HOH
2012
R
HOH
6
1_555
A
HOH
2022
R
HOH
6
7_555
A
ALA
42
A
ALA
42
5
8_555
A
ASN
44
A
ASN
44
5
8_555
A
ARG
68
A
ARG
68
5
1_555
A
HOH
2059
R
HOH
5
8_555
A
HOH
2060
R
HOH
5
8_555
A
ASN
74
A
ASN
74
4
1_555
A
ILE
78
A
ILE
78
4
1_555
A
PRO
79
A
PRO
79
4
1_555
A
CL
1136
I
CL
4
1_555
A
CL
1135
H
CL
1
1_555
A
ILE
88
A
ILE
88
1
1_555
A
ASN
59
A
ASN
59
4
1_555
A
TRP
63
A
TRP
63
4
1_555
A
IKX
1131
D
IKX
4
1_556
A
ACT
1133
F
ACT
4
1_555
A
ARG
73
A
ARG
73
2
1_555
A
ASN
74
A
ASN
74
2
1_555
96
P 43 21 2