0.020398
0.000000
0.000591
0.000000
0.033275
0.000000
0.000000
0.000000
0.011015
0.00000
0.00000
0.00000
Allerston, C.K.
Watson, A.A.
Edlich, C.
Li, B.
Chen, Y.
Ball, L.
Krojer, T.
Arrowsmith, C.H.
Edwards, A.
Bountra, C.
von Delft, F.
Laue, E.D.
Gileadi, O.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
91.66
90.00
49.024
30.053
90.824
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C2 H6 O2
62.068
1,2-ETHANEDIOL
ETHYLENE GLYCOL
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Zn 2
65.409
ZINC ION
non-polymer
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
C
N
89
N
O
N
90
N
C
N
91
N
O
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
N
N
99
S
C
N
100
N
C
N
101
N
O
N
102
N
C
N
103
N
C
N
104
N
C
N
105
N
O
N
106
N
N
N
107
N
O
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
N
N
119
S
C
N
120
N
C
N
121
N
O
N
122
N
C
N
123
N
C
N
124
N
C
N
125
N
O
N
126
N
O
N
127
N
O
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
N
C
N
139
N
C
N
140
N
O
N
141
N
O
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
N
N
148
S
C
N
149
N
C
N
150
N
O
N
151
N
C
Y
152
N
C
Y
153
N
N
Y
154
N
C
Y
155
N
C
Y
156
N
N
N
157
N
O
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
O
N
169
N
H
N
170
N
H
N
171
N
N
N
172
S
C
N
173
N
C
N
174
N
O
N
175
S
C
N
176
N
C
N
177
N
C
N
178
N
C
N
179
N
O
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
N
N
194
S
C
N
195
N
C
N
196
N
O
N
197
N
C
N
198
N
C
N
199
N
C
N
200
N
C
N
201
N
O
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
N
N
216
S
C
N
217
N
C
N
218
N
O
N
219
N
C
N
220
N
C
N
221
N
C
N
222
N
C
N
223
N
N
N
224
N
O
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
N
N
241
S
C
N
242
N
C
N
243
N
O
N
244
N
C
N
245
N
C
N
246
N
S
N
247
N
C
N
248
N
O
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
N
N
261
S
C
N
262
N
C
N
263
N
O
N
264
N
C
Y
265
N
C
Y
266
N
C
Y
267
N
C
Y
268
N
C
Y
269
N
C
Y
270
N
C
N
271
N
O
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
N
N
284
S
C
N
285
N
C
N
286
N
O
N
287
N
C
N
288
N
C
N
289
N
C
N
290
N
O
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
N
N
301
S
C
N
302
N
C
N
303
N
O
N
304
N
C
N
305
N
O
N
306
N
O
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
N
N
315
S
C
N
316
N
C
N
317
N
O
N
318
R
C
N
319
N
O
N
320
N
C
N
321
N
O
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
N
N
332
S
C
N
333
N
C
N
334
N
O
N
335
N
C
Y
336
N
C
Y
337
N
C
Y
338
N
C
Y
339
N
N
Y
340
N
C
Y
341
N
C
Y
342
N
C
Y
343
N
C
Y
344
N
C
N
345
N
O
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
N
N
359
S
C
N
360
N
C
N
361
N
O
N
362
N
C
Y
363
N
C
Y
364
N
C
Y
365
N
C
Y
366
N
C
Y
367
N
C
Y
368
N
C
N
369
N
O
N
370
N
O
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
N
N
383
S
C
N
384
N
C
N
385
N
O
N
386
N
C
N
387
N
C
N
388
N
C
N
389
N
O
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
ZN
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
doub
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
doub
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
doub
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
doub
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
doub
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
Y
149
N
sing
Y
150
N
doub
Y
151
N
doub
N
152
N
sing
Y
153
N
sing
N
154
N
sing
Y
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
doub
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
doub
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
doub
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
doub
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
doub
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
Y
257
N
doub
Y
258
N
sing
Y
259
N
sing
N
260
N
sing
Y
261
N
doub
N
262
N
sing
Y
263
N
doub
N
264
N
sing
Y
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
doub
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
doub
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
doub
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
doub
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
Y
326
N
doub
Y
327
N
sing
Y
328
N
sing
N
329
N
sing
Y
330
N
doub
Y
331
N
sing
Y
332
N
sing
N
333
N
sing
Y
334
N
sing
Y
335
N
doub
N
336
N
sing
Y
337
N
doub
N
338
N
sing
Y
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
doub
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
Y
354
N
doub
Y
355
N
sing
Y
356
N
sing
N
357
N
sing
Y
358
N
doub
N
359
N
sing
Y
360
N
doub
N
361
N
sing
Y
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
doub
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
To be Published
0353
Crystal Structure of the Cxxc and Phd Domain of Human Lysine-Specific Demethylase 2A (Kdm2A)(Fbxl11)
10.2210/pdb4bbq/pdb
pdb_00004bbq
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
MIRRORS
CCD
2012-08-04
ADSC CCD
DOUBLE CRYSTAL
SINGLE WAVELENGTH
M
x-ray
1
0.92
1.0
I04-1
Diamond
0.92
SYNCHROTRON
DIAMOND BEAMLINE I04-1
13319.508
LYSINE-SPECIFIC DEMETHYLASE 2A
1.14.11.27
CXXC AND PHD DOMAIN, RESIDUES 567-681
2
man
polymer
62.068
1,2-ETHANEDIOL
1
syn
non-polymer
65.409
ZINC ION
8
syn
non-polymer
18.015
water
106
nat
water
CXXC-TYPE ZINC FINGER PROTEIN 8, F-BOX AND LEUCINE-RICH REPEAT PROTEIN 11, F-BOX PROTEIN FBL7, F-BOX PROTEIN LILINA, F-BOX/LRR-REPEAT PROTEIN 11, JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 1A, [HISTONE-H3]-LYSINE-36 DEMETHYLASE 1A
no
no
SMRRVRCRKCKACVQGECGVCHYCRDMKKFGGPGRMKQSCVLRQCLAPRLPHSVTCSLCGEVDQNEETQDFEKKLMECCI
CNEIVHPGCLQMDGEGLLNEELPNCWECPKCYQEDSS
SMRRVRCRKCKACVQGECGVCHYCRDMKKFGGPGRMKQSCVLRQCLAPRLPHSVTCSLCGEVDQNEETQDFEKKLMECCI
CNEIVHPGCLQMDGEGLLNEELPNCWECPKCYQEDSS
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
HUMAN
sample
9606
HOMO SAPIENS
469008
ESCHERICHIA COLI
BL21(DE3)
R3-PRARE2
PLASMID
PNIC28-BSA4
1
2.51
51
ANOMALOUS SCATTERING FROM ENDOGENOUS ZINC USED FOR PHASING
7.5
0.1M BIS-TRIS, PH 6.5, 20%(W/V) PEG METHYL ETHER 5000
audit_author
citation_author
chem_comp_atom
chem_comp_bond
database_2
pdbx_database_status
pdbx_struct_conn_angle
software
struct_conn
struct_site
repository
Initial release
Database references
Structure summary
Data collection
Database references
Derived calculations
Other
Refinement description
1
0
2012-10-10
1
1
2018-01-24
1
2
2024-05-08
_audit_author.name
_citation_author.name
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.status_code_sf
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_software.name
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
PDBE
Y
PDBE
2012-09-27
REL
REL
EDO
1,2-ETHANEDIOL
ZN
ZINC ION
HOH
water
EDO
1677
2
EDO
EDO
1677
A
ZN
1678
3
ZN
ZN
1678
A
ZN
1679
3
ZN
ZN
1679
A
ZN
1680
3
ZN
ZN
1680
A
ZN
1681
3
ZN
ZN
1681
A
ZN
1677
3
ZN
ZN
1677
B
ZN
1678
3
ZN
ZN
1678
B
ZN
1679
3
ZN
ZN
1679
B
ZN
1680
3
ZN
ZN
1680
B
HOH
2001
4
HOH
HOH
2001
A
HOH
2002
4
HOH
HOH
2002
A
HOH
2003
4
HOH
HOH
2003
A
HOH
2004
4
HOH
HOH
2004
A
HOH
2005
4
HOH
HOH
2005
A
HOH
2006
4
HOH
HOH
2006
A
HOH
2007
4
HOH
HOH
2007
A
HOH
2008
4
HOH
HOH
2008
A
HOH
2009
4
HOH
HOH
2009
A
HOH
2010
4
HOH
HOH
2010
A
HOH
2011
4
HOH
HOH
2011
A
HOH
2012
4
HOH
HOH
2012
A
HOH
2013
4
HOH
HOH
2013
A
HOH
2014
4
HOH
HOH
2014
A
HOH
2015
4
HOH
HOH
2015
A
HOH
2016
4
HOH
HOH
2016
A
HOH
2017
4
HOH
HOH
2017
A
HOH
2018
4
HOH
HOH
2018
A
HOH
2019
4
HOH
HOH
2019
A
HOH
2020
4
HOH
HOH
2020
A
HOH
2021
4
HOH
HOH
2021
A
HOH
2022
4
HOH
HOH
2022
A
HOH
2023
4
HOH
HOH
2023
A
HOH
2024
4
HOH
HOH
2024
A
HOH
2025
4
HOH
HOH
2025
A
HOH
2026
4
HOH
HOH
2026
A
HOH
2027
4
HOH
HOH
2027
A
HOH
2028
4
HOH
HOH
2028
A
HOH
2029
4
HOH
HOH
2029
A
HOH
2030
4
HOH
HOH
2030
A
HOH
2031
4
HOH
HOH
2031
A
HOH
2032
4
HOH
HOH
2032
A
HOH
2033
4
HOH
HOH
2033
A
HOH
2034
4
HOH
HOH
2034
A
HOH
2035
4
HOH
HOH
2035
A
HOH
2036
4
HOH
HOH
2036
A
HOH
2037
4
HOH
HOH
2037
A
HOH
2038
4
HOH
HOH
2038
A
HOH
2039
4
HOH
HOH
2039
A
HOH
2040
4
HOH
HOH
2040
A
HOH
2041
4
HOH
HOH
2041
A
HOH
2042
4
HOH
HOH
2042
A
HOH
2043
4
HOH
HOH
2043
A
HOH
2044
4
HOH
HOH
2044
A
HOH
2045
4
HOH
HOH
2045
A
HOH
2046
4
HOH
HOH
2046
A
HOH
2047
4
HOH
HOH
2047
A
HOH
2048
4
HOH
HOH
2048
A
HOH
2049
4
HOH
HOH
2049
A
HOH
2050
4
HOH
HOH
2050
A
HOH
2051
4
HOH
HOH
2051
A
HOH
2052
4
HOH
HOH
2052
A
HOH
2053
4
HOH
HOH
2053
A
HOH
2054
4
HOH
HOH
2054
A
HOH
2055
4
HOH
HOH
2055
A
HOH
2056
4
HOH
HOH
2056
A
HOH
2057
4
HOH
HOH
2057
A
HOH
2058
4
HOH
HOH
2058
A
HOH
2059
4
HOH
HOH
2059
A
HOH
2001
4
HOH
HOH
2001
B
HOH
2002
4
HOH
HOH
2002
B
HOH
2003
4
HOH
HOH
2003
B
HOH
2004
4
HOH
HOH
2004
B
HOH
2005
4
HOH
HOH
2005
B
HOH
2006
4
HOH
HOH
2006
B
HOH
2007
4
HOH
HOH
2007
B
HOH
2008
4
HOH
HOH
2008
B
HOH
2009
4
HOH
HOH
2009
B
HOH
2010
4
HOH
HOH
2010
B
HOH
2011
4
HOH
HOH
2011
B
HOH
2012
4
HOH
HOH
2012
B
HOH
2013
4
HOH
HOH
2013
B
HOH
2014
4
HOH
HOH
2014
B
HOH
2015
4
HOH
HOH
2015
B
HOH
2016
4
HOH
HOH
2016
B
HOH
2017
4
HOH
HOH
2017
B
HOH
2018
4
HOH
HOH
2018
B
HOH
2019
4
HOH
HOH
2019
B
HOH
2020
4
HOH
HOH
2020
B
HOH
2021
4
HOH
HOH
2021
B
HOH
2022
4
HOH
HOH
2022
B
HOH
2023
4
HOH
HOH
2023
B
HOH
2024
4
HOH
HOH
2024
B
HOH
2025
4
HOH
HOH
2025
B
HOH
2026
4
HOH
HOH
2026
B
HOH
2027
4
HOH
HOH
2027
B
HOH
2028
4
HOH
HOH
2028
B
HOH
2029
4
HOH
HOH
2029
B
HOH
2030
4
HOH
HOH
2030
B
HOH
2031
4
HOH
HOH
2031
B
HOH
2032
4
HOH
HOH
2032
B
HOH
2033
4
HOH
HOH
2033
B
HOH
2034
4
HOH
HOH
2034
B
HOH
2035
4
HOH
HOH
2035
B
HOH
2036
4
HOH
HOH
2036
B
HOH
2037
4
HOH
HOH
2037
B
HOH
2038
4
HOH
HOH
2038
B
HOH
2039
4
HOH
HOH
2039
B
HOH
2040
4
HOH
HOH
2040
B
HOH
2041
4
HOH
HOH
2041
B
HOH
2042
4
HOH
HOH
2042
B
HOH
2043
4
HOH
HOH
2043
B
HOH
2044
4
HOH
HOH
2044
B
HOH
2045
4
HOH
HOH
2045
B
HOH
2046
4
HOH
HOH
2046
B
HOH
2047
4
HOH
HOH
2047
B
n
1
-1
A
MET
0
n
2
MET
0
A
ARG
567
n
3
ARG
567
A
ARG
568
n
4
ARG
568
A
VAL
569
n
5
VAL
569
A
ARG
570
n
6
ARG
570
A
CYS
571
n
7
CYS
571
A
ARG
572
n
8
ARG
572
A
LYS
573
n
9
LYS
573
A
CYS
574
n
10
CYS
574
A
LYS
575
n
11
LYS
575
A
ALA
576
n
12
ALA
576
A
CYS
577
n
13
CYS
577
A
VAL
578
n
14
VAL
578
A
GLN
579
n
15
GLN
579
A
GLY
580
n
16
GLY
580
A
GLU
581
n
17
GLU
581
A
CYS
582
n
18
CYS
582
A
GLY
583
n
19
GLY
583
A
VAL
584
n
20
VAL
584
A
CYS
585
n
21
CYS
585
A
HIS
586
n
22
HIS
586
A
TYR
587
n
23
TYR
587
A
CYS
588
n
24
CYS
588
A
ARG
589
n
25
ARG
589
A
ASP
590
n
26
ASP
590
A
MET
591
n
27
MET
591
A
LYS
592
n
28
LYS
592
A
LYS
593
n
29
LYS
593
A
PHE
594
n
30
PHE
594
A
GLY
595
n
31
GLY
595
A
GLY
596
n
32
GLY
596
A
PRO
597
n
33
PRO
597
A
GLY
598
n
34
GLY
598
A
ARG
599
n
35
ARG
599
A
MET
600
n
36
MET
600
A
LYS
601
n
37
LYS
601
A
GLN
602
n
38
GLN
602
A
SER
603
n
39
SER
603
A
CYS
604
n
40
CYS
604
A
VAL
605
n
41
VAL
605
A
LEU
606
n
42
LEU
606
A
ARG
607
n
43
ARG
607
A
GLN
608
n
44
GLN
608
A
CYS
609
n
45
CYS
609
A
LEU
610
n
46
LEU
610
A
ALA
611
n
47
ALA
611
A
PRO
612
n
48
PRO
612
A
ARG
613
n
49
ARG
613
A
LEU
614
n
50
LEU
614
A
PRO
615
n
51
PRO
615
A
HIS
616
n
52
HIS
616
A
SER
617
n
53
SER
617
A
VAL
618
n
54
VAL
618
A
THR
619
n
55
THR
619
A
CYS
620
n
56
CYS
620
A
SER
621
n
57
SER
621
A
LEU
622
n
58
LEU
622
A
CYS
623
n
59
CYS
623
A
GLY
624
n
60
GLY
624
A
GLU
625
n
61
GLU
625
A
VAL
626
n
62
VAL
626
A
ASP
627
n
63
ASP
627
A
GLN
628
n
64
GLN
628
A
ASN
629
n
65
ASN
629
A
GLU
630
n
66
GLU
630
A
GLU
631
n
67
GLU
631
A
THR
632
n
68
THR
632
A
GLN
633
n
69
GLN
633
A
ASP
634
n
70
ASP
634
A
PHE
635
n
71
PHE
635
A
GLU
636
n
72
GLU
636
A
LYS
637
n
73
LYS
637
A
LYS
638
n
74
LYS
638
A
LEU
639
n
75
LEU
639
A
MET
640
n
76
MET
640
A
GLU
641
n
77
GLU
641
A
CYS
642
n
78
CYS
642
A
CYS
643
n
79
CYS
643
A
ILE
644
n
80
ILE
644
A
CYS
645
n
81
CYS
645
A
ASN
646
n
82
ASN
646
A
GLU
647
n
83
GLU
647
A
ILE
648
n
84
ILE
648
A
VAL
649
n
85
VAL
649
A
HIS
650
n
86
HIS
650
A
PRO
651
n
87
PRO
651
A
GLY
652
n
88
GLY
652
A
CYS
653
n
89
CYS
653
A
LEU
654
n
90
LEU
654
A
GLN
655
n
91
GLN
655
A
MET
656
n
92
MET
656
A
ASP
657
n
93
ASP
657
A
GLY
658
n
94
GLY
658
A
GLU
659
n
95
GLU
659
A
GLY
660
n
96
GLY
660
A
LEU
661
n
97
LEU
661
A
LEU
662
n
98
LEU
662
A
ASN
663
n
99
ASN
663
A
GLU
664
n
100
GLU
664
A
GLU
665
n
101
GLU
665
A
LEU
666
n
102
LEU
666
A
PRO
667
n
103
PRO
667
A
ASN
668
n
104
ASN
668
A
CYS
669
n
105
CYS
669
A
TRP
670
n
106
TRP
670
A
GLU
671
n
107
GLU
671
A
CYS
672
n
108
CYS
672
A
PRO
673
n
109
PRO
673
A
LYS
674
n
110
LYS
674
A
CYS
675
n
111
CYS
675
A
TYR
676
n
112
TYR
676
A
n
113
677
A
n
114
678
A
n
115
679
A
n
116
680
A
n
117
681
A
n
1
-1
B
MET
0
n
2
MET
0
B
ARG
567
n
3
ARG
567
B
ARG
568
n
4
ARG
568
B
VAL
569
n
5
VAL
569
B
ARG
570
n
6
ARG
570
B
CYS
571
n
7
CYS
571
B
ARG
572
n
8
ARG
572
B
LYS
573
n
9
LYS
573
B
CYS
574
n
10
CYS
574
B
LYS
575
n
11
LYS
575
B
ALA
576
n
12
ALA
576
B
CYS
577
n
13
CYS
577
B
VAL
578
n
14
VAL
578
B
GLN
579
n
15
GLN
579
B
GLY
580
n
16
GLY
580
B
GLU
581
n
17
GLU
581
B
CYS
582
n
18
CYS
582
B
GLY
583
n
19
GLY
583
B
VAL
584
n
20
VAL
584
B
CYS
585
n
21
CYS
585
B
HIS
586
n
22
HIS
586
B
TYR
587
n
23
TYR
587
B
CYS
588
n
24
CYS
588
B
ARG
589
n
25
ARG
589
B
ASP
590
n
26
ASP
590
B
MET
591
n
27
MET
591
B
LYS
592
n
28
LYS
592
B
LYS
593
n
29
LYS
593
B
PHE
594
n
30
PHE
594
B
GLY
595
n
31
GLY
595
B
GLY
596
n
32
GLY
596
B
PRO
597
n
33
PRO
597
B
GLY
598
n
34
GLY
598
B
ARG
599
n
35
ARG
599
B
MET
600
n
36
MET
600
B
LYS
601
n
37
LYS
601
B
GLN
602
n
38
GLN
602
B
SER
603
n
39
SER
603
B
CYS
604
n
40
CYS
604
B
VAL
605
n
41
VAL
605
B
LEU
606
n
42
LEU
606
B
ARG
607
n
43
ARG
607
B
GLN
608
n
44
GLN
608
B
CYS
609
n
45
CYS
609
B
LEU
610
n
46
LEU
610
B
ALA
611
n
47
ALA
611
B
PRO
612
n
48
PRO
612
B
ARG
613
n
49
ARG
613
B
LEU
614
n
50
LEU
614
B
PRO
615
n
51
PRO
615
B
HIS
616
n
52
HIS
616
B
SER
617
n
53
SER
617
B
VAL
618
n
54
VAL
618
B
THR
619
n
55
THR
619
B
CYS
620
n
56
CYS
620
B
SER
621
n
57
SER
621
B
LEU
622
n
58
LEU
622
B
CYS
623
n
59
CYS
623
B
GLY
624
n
60
GLY
624
B
GLU
625
n
61
GLU
625
B
VAL
626
n
62
VAL
626
B
ASP
627
n
63
ASP
627
B
GLN
628
n
64
GLN
628
B
ASN
629
n
65
ASN
629
B
n
66
630
B
n
67
631
B
n
68
632
B
n
69
633
B
n
70
634
B
PHE
635
n
71
PHE
635
B
GLU
636
n
72
GLU
636
B
LYS
637
n
73
LYS
637
B
LYS
638
n
74
LYS
638
B
LEU
639
n
75
LEU
639
B
MET
640
n
76
MET
640
B
GLU
641
n
77
GLU
641
B
CYS
642
n
78
CYS
642
B
CYS
643
n
79
CYS
643
B
ILE
644
n
80
ILE
644
B
CYS
645
n
81
CYS
645
B
ASN
646
n
82
ASN
646
B
GLU
647
n
83
GLU
647
B
ILE
648
n
84
ILE
648
B
VAL
649
n
85
VAL
649
B
HIS
650
n
86
HIS
650
B
PRO
651
n
87
PRO
651
B
GLY
652
n
88
GLY
652
B
CYS
653
n
89
CYS
653
B
LEU
654
n
90
LEU
654
B
GLN
655
n
91
GLN
655
B
MET
656
n
92
MET
656
B
ASP
657
n
93
ASP
657
B
GLY
658
n
94
GLY
658
B
GLU
659
n
95
GLU
659
B
GLY
660
n
96
GLY
660
B
LEU
661
n
97
LEU
661
B
LEU
662
n
98
LEU
662
B
ASN
663
n
99
ASN
663
B
GLU
664
n
100
GLU
664
B
GLU
665
n
101
GLU
665
B
LEU
666
n
102
LEU
666
B
PRO
667
n
103
PRO
667
B
ASN
668
n
104
ASN
668
B
CYS
669
n
105
CYS
669
B
TRP
670
n
106
TRP
670
B
GLU
671
n
107
GLU
671
B
CYS
672
n
108
CYS
672
B
PRO
673
n
109
PRO
673
B
LYS
674
n
110
LYS
674
B
CYS
675
n
111
CYS
675
B
TYR
676
n
112
TYR
676
B
n
113
677
B
n
114
678
B
n
115
679
B
n
116
680
B
n
117
681
B
0.3334
-0.6868
1.1002
2.0309
-2.9205
3.6596
0.0444
-0.0131
0.0308
0.2050
-0.0626
-0.0736
-0.3318
0.2827
0.0181
0.0153
0.0121
-0.0536
-0.0778
-0.0313
-0.0405
refined
4.1910
17.1060
65.8942
X-RAY DIFFRACTION
1.4599
1.5757
-2.1276
2.5425
-2.8803
4.3012
0.0013
0.3406
0.0871
-0.1763
0.1028
-0.1209
0.1941
-0.0664
-0.1041
-0.0532
0.0064
0.0381
-0.0139
0.0218
-0.0864
refined
-21.5774
-15.4700
71.4614
X-RAY DIFFRACTION
X-RAY DIFFRACTION
1
CHAIN A
X-RAY DIFFRACTION
2
CHAIN B
author_and_software_defined_assembly
PISA
1
monomeric
author_and_software_defined_assembly
PISA
1
monomeric
A
CYS
571
A
SG
CYS
7
1_555
A
ZN
1679
E
ZN
ZN
1_555
A
CYS
574
A
SG
CYS
10
1_555
107.8
A
CYS
571
A
SG
CYS
7
1_555
A
ZN
1679
E
ZN
ZN
1_555
A
CYS
577
A
SG
CYS
13
1_555
114.0
A
CYS
574
A
SG
CYS
10
1_555
A
ZN
1679
E
ZN
ZN
1_555
A
CYS
577
A
SG
CYS
13
1_555
102.9
A
CYS
571
A
SG
CYS
7
1_555
A
ZN
1679
E
ZN
ZN
1_555
A
CYS
609
A
SG
CYS
45
1_555
101.5
A
CYS
574
A
SG
CYS
10
1_555
A
ZN
1679
E
ZN
ZN
1_555
A
CYS
609
A
SG
CYS
45
1_555
121.9
A
CYS
577
A
SG
CYS
13
1_555
A
ZN
1679
E
ZN
ZN
1_555
A
CYS
609
A
SG
CYS
45
1_555
109.2
A
CYS
582
A
SG
CYS
18
1_555
A
ZN
1678
D
ZN
ZN
1_555
A
CYS
585
A
SG
CYS
21
1_555
104.5
A
CYS
582
A
SG
CYS
18
1_555
A
ZN
1678
D
ZN
ZN
1_555
A
CYS
588
A
SG
CYS
24
1_555
117.7
A
CYS
585
A
SG
CYS
21
1_555
A
ZN
1678
D
ZN
ZN
1_555
A
CYS
588
A
SG
CYS
24
1_555
107.2
A
CYS
582
A
SG
CYS
18
1_555
A
ZN
1678
D
ZN
ZN
1_555
A
CYS
604
A
SG
CYS
40
1_555
105.2
A
CYS
585
A
SG
CYS
21
1_555
A
ZN
1678
D
ZN
ZN
1_555
A
CYS
604
A
SG
CYS
40
1_555
115.6
A
CYS
588
A
SG
CYS
24
1_555
A
ZN
1678
D
ZN
ZN
1_555
A
CYS
604
A
SG
CYS
40
1_555
107.1
A
CYS
620
A
SG
CYS
56
1_555
A
ZN
1681
G
ZN
ZN
1_555
A
CYS
623
A
SG
CYS
59
1_555
106.8
A
CYS
620
A
SG
CYS
56
1_555
A
ZN
1681
G
ZN
ZN
1_555
A
HIS
650
A
ND1
HIS
86
1_555
107.1
A
CYS
623
A
SG
CYS
59
1_555
A
ZN
1681
G
ZN
ZN
1_555
A
HIS
650
A
ND1
HIS
86
1_555
96.1
A
CYS
620
A
SG
CYS
56
1_555
A
ZN
1681
G
ZN
ZN
1_555
A
CYS
653
A
SG
CYS
89
1_555
121.7
A
CYS
623
A
SG
CYS
59
1_555
A
ZN
1681
G
ZN
ZN
1_555
A
CYS
653
A
SG
CYS
89
1_555
110.9
A
HIS
650
A
ND1
HIS
86
1_555
A
ZN
1681
G
ZN
ZN
1_555
A
CYS
653
A
SG
CYS
89
1_555
111.1
A
CYS
642
A
SG
CYS
78
1_555
A
ZN
1680
F
ZN
ZN
1_555
A
CYS
645
A
SG
CYS
81
1_555
101.7
A
CYS
642
A
SG
CYS
78
1_555
A
ZN
1680
F
ZN
ZN
1_555
A
CYS
672
A
SG
CYS
108
1_555
112.5
A
CYS
645
A
SG
CYS
81
1_555
A
ZN
1680
F
ZN
ZN
1_555
A
CYS
672
A
SG
CYS
108
1_555
116.0
A
CYS
642
A
SG
CYS
78
1_555
A
ZN
1680
F
ZN
ZN
1_555
A
CYS
675
A
SG
CYS
111
1_555
109.2
A
CYS
645
A
SG
CYS
81
1_555
A
ZN
1680
F
ZN
ZN
1_555
A
CYS
675
A
SG
CYS
111
1_555
103.9
A
CYS
672
A
SG
CYS
108
1_555
A
ZN
1680
F
ZN
ZN
1_555
A
CYS
675
A
SG
CYS
111
1_555
112.7
B
CYS
571
B
SG
CYS
7
1_555
B
ZN
1678
I
ZN
ZN
1_555
B
CYS
574
B
SG
CYS
10
1_555
104.9
B
CYS
571
B
SG
CYS
7
1_555
B
ZN
1678
I
ZN
ZN
1_555
B
CYS
577
B
SG
CYS
13
1_555
116.5
B
CYS
574
B
SG
CYS
10
1_555
B
ZN
1678
I
ZN
ZN
1_555
B
CYS
577
B
SG
CYS
13
1_555
102.7
B
CYS
571
B
SG
CYS
7
1_555
B
ZN
1678
I
ZN
ZN
1_555
B
CYS
609
B
SG
CYS
45
1_555
103.4
B
CYS
574
B
SG
CYS
10
1_555
B
ZN
1678
I
ZN
ZN
1_555
B
CYS
609
B
SG
CYS
45
1_555
117.3
B
CYS
577
B
SG
CYS
13
1_555
B
ZN
1678
I
ZN
ZN
1_555
B
CYS
609
B
SG
CYS
45
1_555
112.3
B
CYS
582
B
SG
CYS
18
1_555
B
ZN
1677
H
ZN
ZN
1_555
B
CYS
585
B
SG
CYS
21
1_555
107.7
B
CYS
582
B
SG
CYS
18
1_555
B
ZN
1677
H
ZN
ZN
1_555
B
CYS
588
B
SG
CYS
24
1_555
117.9
B
CYS
585
B
SG
CYS
21
1_555
B
ZN
1677
H
ZN
ZN
1_555
B
CYS
588
B
SG
CYS
24
1_555
106.5
B
CYS
582
B
SG
CYS
18
1_555
B
ZN
1677
H
ZN
ZN
1_555
B
CYS
604
B
SG
CYS
40
1_555
105.3
B
CYS
585
B
SG
CYS
21
1_555
B
ZN
1677
H
ZN
ZN
1_555
B
CYS
604
B
SG
CYS
40
1_555
115.2
B
CYS
588
B
SG
CYS
24
1_555
B
ZN
1677
H
ZN
ZN
1_555
B
CYS
604
B
SG
CYS
40
1_555
104.7
B
CYS
620
B
SG
CYS
56
1_555
B
ZN
1680
K
ZN
ZN
1_555
B
CYS
623
B
SG
CYS
59
1_555
111.5
B
CYS
620
B
SG
CYS
56
1_555
B
ZN
1680
K
ZN
ZN
1_555
B
HIS
650
B
ND1
HIS
86
1_555
107.2
B
CYS
623
B
SG
CYS
59
1_555
B
ZN
1680
K
ZN
ZN
1_555
B
HIS
650
B
ND1
HIS
86
1_555
94.3
B
CYS
620
B
SG
CYS
56
1_555
B
ZN
1680
K
ZN
ZN
1_555
B
CYS
653
B
SG
CYS
89
1_555
126.3
B
CYS
623
B
SG
CYS
59
1_555
B
ZN
1680
K
ZN
ZN
1_555
B
CYS
653
B
SG
CYS
89
1_555
109.6
B
HIS
650
B
ND1
HIS
86
1_555
B
ZN
1680
K
ZN
ZN
1_555
B
CYS
653
B
SG
CYS
89
1_555
102.6
B
CYS
642
B
SG
CYS
78
1_555
B
ZN
1679
J
ZN
ZN
1_555
B
CYS
645
B
SG
CYS
81
1_555
105.4
B
CYS
642
B
SG
CYS
78
1_555
B
ZN
1679
J
ZN
ZN
1_555
B
CYS
672
B
SG
CYS
108
1_555
111.8
B
CYS
645
B
SG
CYS
81
1_555
B
ZN
1679
J
ZN
ZN
1_555
B
CYS
672
B
SG
CYS
108
1_555
112.5
B
CYS
642
B
SG
CYS
78
1_555
B
ZN
1679
J
ZN
ZN
1_555
B
CYS
675
B
SG
CYS
111
1_555
114.0
B
CYS
645
B
SG
CYS
81
1_555
B
ZN
1679
J
ZN
ZN
1_555
B
CYS
675
B
SG
CYS
111
1_555
104.5
B
CYS
672
B
SG
CYS
108
1_555
B
ZN
1679
J
ZN
ZN
1_555
B
CYS
675
B
SG
CYS
111
1_555
108.6
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
VAL
649
A
N
VAL
85
A
O
MET
640
A
O
MET
76
A
O
GLU
641
A
O
GLU
77
A
N
TRP
670
A
N
TRP
106
A
N
GLU
671
A
N
GLU
107
A
O
LEU
661
A
O
LEU
97
B
N
VAL
649
B
N
VAL
85
B
O
MET
640
B
O
MET
76
B
O
GLU
641
B
O
GLU
77
B
N
TRP
670
B
N
TRP
106
B
N
GLU
671
B
N
GLU
107
B
O
LEU
661
B
O
LEU
97
1
A
CD
ARG
567
A
CD
ARG
3
1
Y
1
A
NE
ARG
567
A
NE
ARG
3
1
Y
1
A
CZ
ARG
567
A
CZ
ARG
3
1
Y
1
A
NH1
ARG
567
A
NH1
ARG
3
1
Y
1
A
NH2
ARG
567
A
NH2
ARG
3
1
Y
1
A
NZ
LYS
573
A
NZ
LYS
9
1
Y
1
A
CD
LYS
575
A
CD
LYS
11
1
Y
1
A
CE
LYS
575
A
CE
LYS
11
1
Y
1
A
NZ
LYS
575
A
NZ
LYS
11
1
Y
1
A
CE
LYS
592
A
CE
LYS
28
1
Y
1
A
NZ
LYS
592
A
NZ
LYS
28
1
Y
1
A
CG
ARG
613
A
CG
ARG
49
1
Y
1
A
CD
ARG
613
A
CD
ARG
49
1
Y
1
A
NE
ARG
613
A
NE
ARG
49
1
Y
1
A
CZ
ARG
613
A
CZ
ARG
49
1
Y
1
A
NH1
ARG
613
A
NH1
ARG
49
1
Y
1
A
NH2
ARG
613
A
NH2
ARG
49
1
Y
1
A
CG
HIS
616
A
CG
HIS
52
1
Y
1
A
ND1
HIS
616
A
ND1
HIS
52
1
Y
1
A
CD2
HIS
616
A
CD2
HIS
52
1
Y
1
A
CE1
HIS
616
A
CE1
HIS
52
1
Y
1
A
NE2
HIS
616
A
NE2
HIS
52
1
Y
1
A
CD
GLU
625
A
CD
GLU
61
1
Y
1
A
OE1
GLU
625
A
OE1
GLU
61
1
Y
1
A
OE2
GLU
625
A
OE2
GLU
61
1
Y
1
A
CG
GLU
630
A
CG
GLU
66
1
Y
1
A
CD
GLU
630
A
CD
GLU
66
1
Y
1
A
OE1
GLU
630
A
OE1
GLU
66
1
Y
1
A
OE2
GLU
630
A
OE2
GLU
66
1
Y
1
A
CG
GLU
631
A
CG
GLU
67
1
Y
1
A
CD
GLU
631
A
CD
GLU
67
1
Y
1
A
OE1
GLU
631
A
OE1
GLU
67
1
Y
1
A
OE2
GLU
631
A
OE2
GLU
67
1
Y
1
A
OG1
THR
632
A
OG1
THR
68
1
Y
1
A
CG2
THR
632
A
CG2
THR
68
1
Y
1
A
CG
GLN
633
A
CG
GLN
69
1
Y
1
A
CD
GLN
633
A
CD
GLN
69
1
Y
1
A
OE1
GLN
633
A
OE1
GLN
69
1
Y
1
A
NE2
GLN
633
A
NE2
GLN
69
1
Y
1
A
CG
LYS
637
A
CG
LYS
73
1
Y
1
A
CD
LYS
637
A
CD
LYS
73
1
Y
1
A
CE
LYS
637
A
CE
LYS
73
1
Y
1
A
NZ
LYS
637
A
NZ
LYS
73
1
Y
1
A
CD1
LEU
662
A
CD1
LEU
98
1
Y
1
A
CD2
LEU
662
A
CD2
LEU
98
1
Y
1
A
CG
GLU
664
A
CG
GLU
100
1
Y
1
A
CD
GLU
664
A
CD
GLU
100
1
Y
1
A
OE1
GLU
664
A
OE1
GLU
100
1
Y
1
A
OE2
GLU
664
A
OE2
GLU
100
1
Y
1
A
OE1
GLU
665
A
OE1
GLU
101
1
Y
1
A
OE2
GLU
665
A
OE2
GLU
101
1
Y
1
B
CG
ARG
567
B
CG
ARG
3
1
Y
1
B
CD
ARG
567
B
CD
ARG
3
1
Y
1
B
NE
ARG
567
B
NE
ARG
3
1
Y
1
B
CZ
ARG
567
B
CZ
ARG
3
1
Y
1
B
NH1
ARG
567
B
NH1
ARG
3
1
Y
1
B
NH2
ARG
567
B
NH2
ARG
3
1
Y
1
B
NE
ARG
572
B
NE
ARG
8
1
Y
1
B
CZ
ARG
572
B
CZ
ARG
8
1
Y
1
B
NH1
ARG
572
B
NH1
ARG
8
1
Y
1
B
NH2
ARG
572
B
NH2
ARG
8
1
Y
1
B
CG
LYS
573
B
CG
LYS
9
1
Y
1
B
CD
LYS
573
B
CD
LYS
9
1
Y
1
B
CE
LYS
573
B
CE
LYS
9
1
Y
1
B
NZ
LYS
573
B
NZ
LYS
9
1
Y
1
B
CG
LYS
575
B
CG
LYS
11
1
Y
1
B
CD
LYS
575
B
CD
LYS
11
1
Y
1
B
CE
LYS
575
B
CE
LYS
11
1
Y
1
B
NZ
LYS
575
B
NZ
LYS
11
1
Y
1
B
NE
ARG
589
B
NE
ARG
25
1
Y
1
B
CZ
ARG
589
B
CZ
ARG
25
1
Y
1
B
NH1
ARG
589
B
NH1
ARG
25
1
Y
1
B
NH2
ARG
589
B
NH2
ARG
25
1
Y
1
B
NE
ARG
599
B
NE
ARG
35
1
Y
1
B
CZ
ARG
599
B
CZ
ARG
35
1
Y
1
B
NH1
ARG
599
B
NH1
ARG
35
1
Y
1
B
NH2
ARG
599
B
NH2
ARG
35
1
Y
1
B
CG
GLU
625
B
CG
GLU
61
1
Y
1
B
CD
GLU
625
B
CD
GLU
61
1
Y
1
B
OE1
GLU
625
B
OE1
GLU
61
1
Y
1
B
OE2
GLU
625
B
OE2
GLU
61
1
Y
1
B
CG
GLN
628
B
CG
GLN
64
1
Y
1
B
CD
GLN
628
B
CD
GLN
64
1
Y
1
B
OE1
GLN
628
B
OE1
GLN
64
1
Y
1
B
NE2
GLN
628
B
NE2
GLN
64
1
Y
1
B
CG
ASN
629
B
CG
ASN
65
1
Y
1
B
OD1
ASN
629
B
OD1
ASN
65
1
Y
1
B
ND2
ASN
629
B
ND2
ASN
65
1
Y
1
B
CG
GLU
636
B
CG
GLU
72
1
Y
1
B
CD
GLU
636
B
CD
GLU
72
1
Y
1
B
OE1
GLU
636
B
OE1
GLU
72
1
Y
1
B
OE2
GLU
636
B
OE2
GLU
72
1
Y
1
B
CG
LYS
637
B
CG
LYS
73
1
Y
1
B
CD
LYS
637
B
CD
LYS
73
1
Y
1
B
CE
LYS
637
B
CE
LYS
73
1
Y
1
B
NZ
LYS
637
B
NZ
LYS
73
1
Y
1
B
CG1
ILE
644
B
CG1
ILE
80
1
Y
1
B
CG2
ILE
644
B
CG2
ILE
80
1
Y
1
B
CD1
ILE
644
B
CD1
ILE
80
1
Y
1
B
CG
GLN
655
B
CG
GLN
91
1
Y
1
B
CD
GLN
655
B
CD
GLN
91
1
Y
1
B
OE1
GLN
655
B
OE1
GLN
91
1
Y
1
B
NE2
GLN
655
B
NE2
GLN
91
1
Y
1
B
CG
GLU
659
B
CG
GLU
95
1
Y
1
B
CD
GLU
659
B
CD
GLU
95
1
Y
1
B
OE1
GLU
659
B
OE1
GLU
95
1
Y
1
B
OE2
GLU
659
B
OE2
GLU
95
1
Y
1
B
CD1
LEU
662
B
CD1
LEU
98
1
Y
1
B
CD2
LEU
662
B
CD2
LEU
98
1
Y
1
B
CG
GLU
664
B
CG
GLU
100
1
Y
1
B
CD
GLU
664
B
CD
GLU
100
1
Y
1
B
OE1
GLU
664
B
OE1
GLU
100
1
Y
1
B
OE2
GLU
664
B
OE2
GLU
100
1
Y
1
B
CG
GLU
665
B
CG
GLU
101
1
Y
1
B
CD
GLU
665
B
CD
GLU
101
1
Y
1
B
OE1
GLU
665
B
OE1
GLU
101
1
Y
1
B
OE2
GLU
665
B
OE2
GLU
101
1
Y
1
B
CE
LYS
674
B
CE
LYS
110
1
Y
1
B
NZ
LYS
674
B
NZ
LYS
110
1
Y
1
B
CG
TYR
676
B
CG
TYR
112
1
Y
1
B
CD1
TYR
676
B
CD1
TYR
112
1
Y
1
B
CD2
TYR
676
B
CD2
TYR
112
1
Y
1
B
CE1
TYR
676
B
CE1
TYR
112
1
Y
1
B
CE2
TYR
676
B
CE2
TYR
112
1
Y
1
B
CZ
TYR
676
B
CZ
TYR
112
1
Y
1
B
OH
TYR
676
B
OH
TYR
112
1
Y
1
A
SER
-1
A
SER
1
1
Y
1
A
GLN
677
A
GLN
113
1
Y
1
A
GLU
678
A
GLU
114
1
Y
1
A
ASP
679
A
ASP
115
1
Y
1
A
SER
680
A
SER
116
1
Y
1
A
SER
681
A
SER
117
1
Y
1
B
SER
-1
B
SER
1
1
Y
1
B
GLU
630
B
GLU
66
1
Y
1
B
GLU
631
B
GLU
67
1
Y
1
B
THR
632
B
THR
68
1
Y
1
B
GLN
633
B
GLN
69
1
Y
1
B
ASP
634
B
ASP
70
1
Y
1
B
GLN
677
B
GLN
113
1
Y
1
B
GLU
678
B
GLU
114
1
Y
1
B
ASP
679
B
ASP
115
1
Y
1
B
SER
680
B
SER
116
1
Y
1
B
SER
681
B
SER
117
1
Y
1
A
ILE
644
-102.50
-60.16
1
B
ILE
644
-101.96
-60.39
48.63
-11.9938
0.0000
6.3255
8.5589
0.0000
3.4349
0.9194
0.8894
IDEAL-DIST CONTACT TERM CONTACT SETUP. RESIDUE TYPES WITHOUT CCP4 ATOM TYPE IN LIBRARY=ZN. NUMBER WITH APPROX DEFAULT CCP4 ATOM TYPE=0. NUMBER TREATED BY BAD NON-BONDED CONTACTS=8.
0.2209
0.1969
0.1981
2.24
90.79
643
13045
4.93
98.98
0.225
RANDOM
1
THROUGHOUT
0.0
SAD
0.246
0.182
0.176
NONE
0.311
2.24
90.79
106
1682
12
0
1564
0.010
1592
HARMONIC
2.00
1.09
2139
HARMONIC
2.00
750
SINUSOIDAL
2.00
32
HARMONIC
2.00
238
HARMONIC
5.00
1592
HARMONIC
20.00
2
SEMIHARMONIC
5.00
3.41
2.95
204
SEMIHARMONIC
5.00
1756
SEMIHARMONIC
4.00
0.2343
0.1996
0.2015
2.42
136
2530
2666
7
5.10
98.98
39.61
2.24
90.79
4BBQ
13091
0.08
1
16.00
7.5
98.7
0.49
2.24
2.36
3.80
1
7.5
98.2
refinement
BUSTER
2.11.2
data reduction
autoPROC
data scaling
AP_SCALE
phasing
SHARP
Crystal structure of the CXXC and PHD domain of Human Lysine-specific Demethylase 2A (KDM2A)(FBXL11)
1
N
N
1
N
N
2
N
N
3
N
N
3
N
N
3
N
N
3
N
N
3
N
N
3
N
N
3
N
N
3
N
N
4
N
N
4
N
N
A
CYS
574
A
CYS
10
HELX_P
A
GLN
579
A
GLN
15
1
1
6
A
CYS
585
A
CYS
21
HELX_P
A
MET
591
A
MET
27
1
2
7
A
LYS
592
A
LYS
28
HELX_P
A
GLY
595
A
GLY
31
5
3
4
A
CYS
604
A
CYS
40
HELX_P
A
GLN
608
A
GLN
44
5
4
5
A
GLN
628
A
GLN
64
HELX_P
A
GLN
633
A
GLN
69
1
5
6
A
ASP
634
A
ASP
70
HELX_P
A
LYS
638
A
LYS
74
5
6
5
A
HIS
650
A
HIS
86
HELX_P
A
LEU
654
A
LEU
90
5
7
5
B
CYS
574
B
CYS
10
HELX_P
B
GLN
579
B
GLN
15
1
8
6
B
CYS
585
B
CYS
21
HELX_P
B
MET
591
B
MET
27
1
9
7
B
LYS
592
B
LYS
28
HELX_P
B
GLY
595
B
GLY
31
5
10
4
B
CYS
604
B
CYS
40
HELX_P
B
GLN
608
B
GLN
44
5
11
5
B
HIS
650
B
HIS
86
HELX_P
B
LEU
654
B
LEU
90
5
12
5
metalc
2.517
A
CYS
571
A
SG
CYS
7
1_555
A
ZN
1679
E
ZN
ZN
1_555
metalc
2.232
A
CYS
574
A
SG
CYS
10
1_555
A
ZN
1679
E
ZN
ZN
1_555
metalc
2.348
A
CYS
577
A
SG
CYS
13
1_555
A
ZN
1679
E
ZN
ZN
1_555
metalc
2.390
A
CYS
582
A
SG
CYS
18
1_555
A
ZN
1678
D
ZN
ZN
1_555
metalc
2.505
A
CYS
585
A
SG
CYS
21
1_555
A
ZN
1678
D
ZN
ZN
1_555
metalc
2.285
A
CYS
588
A
SG
CYS
24
1_555
A
ZN
1678
D
ZN
ZN
1_555
metalc
2.277
A
CYS
604
A
SG
CYS
40
1_555
A
ZN
1678
D
ZN
ZN
1_555
metalc
2.216
A
CYS
609
A
SG
CYS
45
1_555
A
ZN
1679
E
ZN
ZN
1_555
metalc
2.314
A
CYS
620
A
SG
CYS
56
1_555
A
ZN
1681
G
ZN
ZN
1_555
metalc
2.434
A
CYS
623
A
SG
CYS
59
1_555
A
ZN
1681
G
ZN
ZN
1_555
metalc
2.260
A
CYS
642
A
SG
CYS
78
1_555
A
ZN
1680
F
ZN
ZN
1_555
metalc
2.417
A
CYS
645
A
SG
CYS
81
1_555
A
ZN
1680
F
ZN
ZN
1_555
metalc
2.169
A
HIS
650
A
ND1
HIS
86
1_555
A
ZN
1681
G
ZN
ZN
1_555
metalc
2.299
A
CYS
653
A
SG
CYS
89
1_555
A
ZN
1681
G
ZN
ZN
1_555
metalc
2.373
A
CYS
672
A
SG
CYS
108
1_555
A
ZN
1680
F
ZN
ZN
1_555
metalc
2.297
A
CYS
675
A
SG
CYS
111
1_555
A
ZN
1680
F
ZN
ZN
1_555
metalc
2.469
B
CYS
571
B
SG
CYS
7
1_555
B
ZN
1678
I
ZN
ZN
1_555
metalc
2.327
B
CYS
574
B
SG
CYS
10
1_555
B
ZN
1678
I
ZN
ZN
1_555
metalc
2.297
B
CYS
577
B
SG
CYS
13
1_555
B
ZN
1678
I
ZN
ZN
1_555
metalc
2.309
B
CYS
582
B
SG
CYS
18
1_555
B
ZN
1677
H
ZN
ZN
1_555
metalc
2.464
B
CYS
585
B
SG
CYS
21
1_555
B
ZN
1677
H
ZN
ZN
1_555
metalc
2.333
B
CYS
588
B
SG
CYS
24
1_555
B
ZN
1677
H
ZN
ZN
1_555
metalc
2.298
B
CYS
604
B
SG
CYS
40
1_555
B
ZN
1677
H
ZN
ZN
1_555
metalc
2.161
B
CYS
609
B
SG
CYS
45
1_555
B
ZN
1678
I
ZN
ZN
1_555
metalc
2.244
B
CYS
620
B
SG
CYS
56
1_555
B
ZN
1680
K
ZN
ZN
1_555
metalc
2.419
B
CYS
623
B
SG
CYS
59
1_555
B
ZN
1680
K
ZN
ZN
1_555
metalc
2.170
B
CYS
642
B
SG
CYS
78
1_555
B
ZN
1679
J
ZN
ZN
1_555
metalc
2.405
B
CYS
645
B
SG
CYS
81
1_555
B
ZN
1679
J
ZN
ZN
1_555
metalc
2.274
B
HIS
650
B
ND1
HIS
86
1_555
B
ZN
1680
K
ZN
ZN
1_555
metalc
2.264
B
CYS
653
B
SG
CYS
89
1_555
B
ZN
1680
K
ZN
ZN
1_555
metalc
2.526
B
CYS
672
B
SG
CYS
108
1_555
B
ZN
1679
J
ZN
ZN
1_555
metalc
2.225
B
CYS
675
B
SG
CYS
111
1_555
B
ZN
1679
J
ZN
ZN
1_555
OXIDOREDUCTASE
OXIDOREDUCTASE, UBIQUITIN, LIGASE, UBIQUITINATION, DEMETHYLATION, ZF-CXXC DNA BINDING DOMAIN, CPG ISLAND, CHROMATIN, KDM2A, FBXL11
KDM2A_HUMAN
UNP
1
Q9Y2K7
567
681
4BBQ
567
681
Q9Y2K7
A
1
3
117
567
681
4BBQ
567
681
Q9Y2K7
B
1
3
117
1
expression tag
SER
-1
4BBQ
A
Q9Y2K7
UNP
1
1
expression tag
MET
0
4BBQ
A
Q9Y2K7
UNP
2
2
expression tag
SER
-1
4BBQ
B
Q9Y2K7
UNP
1
2
expression tag
MET
0
4BBQ
B
Q9Y2K7
UNP
2
4
4
anti-parallel
parallel
anti-parallel
anti-parallel
parallel
anti-parallel
A
ILE
648
A
ILE
84
A
VAL
649
A
VAL
85
A
MET
640
A
MET
76
A
CYS
642
A
CYS
78
A
CYS
669
A
CYS
105
A
GLU
671
A
GLU
107
A
LEU
661
A
LEU
97
A
LEU
662
A
LEU
98
B
ILE
648
B
ILE
84
B
VAL
649
B
VAL
85
B
MET
640
B
MET
76
B
CYS
642
B
CYS
78
B
CYS
669
B
CYS
105
B
GLU
671
B
GLU
107
B
LEU
661
B
LEU
97
B
LEU
662
B
LEU
98
BINDING SITE FOR RESIDUE EDO A 1677
A
EDO
1677
Software
7
BINDING SITE FOR RESIDUE ZN B 1677
B
ZN
1677
Software
4
BINDING SITE FOR RESIDUE ZN A 1678
A
ZN
1678
Software
4
BINDING SITE FOR RESIDUE ZN A 1679
A
ZN
1679
Software
4
BINDING SITE FOR RESIDUE ZN B 1678
B
ZN
1678
Software
4
BINDING SITE FOR RESIDUE ZN A 1680
A
ZN
1680
Software
4
BINDING SITE FOR RESIDUE ZN A 1681
A
ZN
1681
Software
4
BINDING SITE FOR RESIDUE ZN B 1679
B
ZN
1679
Software
4
BINDING SITE FOR RESIDUE ZN B 1680
B
ZN
1680
Software
4
A
ASP
657
A
ASP
93
7
1_555
A
GLY
658
A
GLY
94
7
1_555
A
HOH
2049
L
HOH
7
1_555
B
LYS
601
B
LYS
37
7
1_665
B
GLN
602
B
GLN
38
7
1_665
B
HOH
2006
M
HOH
7
1_665
B
HOH
2029
M
HOH
7
1_665
B
CYS
582
B
CYS
18
4
1_555
B
CYS
585
B
CYS
21
4
1_555
B
CYS
588
B
CYS
24
4
1_555
B
CYS
604
B
CYS
40
4
1_555
A
CYS
582
A
CYS
18
4
1_555
A
CYS
585
A
CYS
21
4
1_555
A
CYS
588
A
CYS
24
4
1_555
A
CYS
604
A
CYS
40
4
1_555
A
CYS
571
A
CYS
7
4
1_555
A
CYS
574
A
CYS
10
4
1_555
A
CYS
577
A
CYS
13
4
1_555
A
CYS
609
A
CYS
45
4
1_555
B
CYS
571
B
CYS
7
4
1_555
B
CYS
574
B
CYS
10
4
1_555
B
CYS
577
B
CYS
13
4
1_555
B
CYS
609
B
CYS
45
4
1_555
A
CYS
642
A
CYS
78
4
1_555
A
CYS
645
A
CYS
81
4
1_555
A
CYS
672
A
CYS
108
4
1_555
A
CYS
675
A
CYS
111
4
1_555
A
CYS
620
A
CYS
56
4
1_555
A
CYS
623
A
CYS
59
4
1_555
A
HIS
650
A
HIS
86
4
1_555
A
CYS
653
A
CYS
89
4
1_555
B
CYS
642
B
CYS
78
4
1_555
B
CYS
645
B
CYS
81
4
1_555
B
CYS
672
B
CYS
108
4
1_555
B
CYS
675
B
CYS
111
4
1_555
B
CYS
620
B
CYS
56
4
1_555
B
CYS
623
B
CYS
59
4
1_555
B
HIS
650
B
HIS
86
4
1_555
B
CYS
653
B
CYS
89
4
1_555
4
P 1 21 1