0.009868 0.005697 0.000000 0.000000 0.011395 0.000000 0.000000 0.000000 0.002217 0.00000 0.00000 0.00000 Xiong, X. Coombs, P. Martin, S.R. Liu, J. Xiao, H. McCauley, J.W. Locher, K. Walker, P.A. Collins, P.J. Kawaoka, Y. Skehel, J.J. Gamblin, S.J. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 18 90.00 90.00 120.00 101.338 101.338 451.102 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C8 H18 N2 O4 S 238.305 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID HEPES non-polymer C6 H12 O6 180.156 beta-D-galactopyranose beta-D-galactose; D-galactose; galactose D-saccharide, beta linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C8 H15 N O6 221.208 2-acetamido-2-deoxy-beta-D-glucopyranose N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE D-saccharide, beta linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C11 H19 N O9 309.270 N-acetyl-alpha-neuraminic acid N-acetylneuraminic acid; sialic acid; alpha-sialic acid; O-SIALIC ACID D-saccharide, alpha linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 N C N 90 N C N 91 N N N 92 N C N 93 N C N 94 N C N 95 N C N 96 N O N 97 N C N 98 N C N 99 N S N 100 N O N 101 N O N 102 N O N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 R C N 122 R C N 123 S C N 124 R C N 125 R C N 126 N C N 127 N O N 128 N O N 129 N O N 130 N O N 131 N O N 132 N O N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N N N 146 S C N 147 N C N 148 N O N 149 N C N 150 N C N 151 N C N 152 N O N 153 N N N 154 N O N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N N N 166 S C N 167 N C N 168 N O N 169 N C N 170 N C N 171 N C N 172 N O N 173 N O N 174 N O N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N N N 185 N C N 186 N C N 187 N O N 188 N O N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N N N 195 S C N 196 N C N 197 N O N 198 N C Y 199 N C Y 200 N N Y 201 N C Y 202 N C Y 203 N N N 204 N O N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N O N 216 N H N 217 N H N 218 N N N 219 S C N 220 N C N 221 N O N 222 S C N 223 N C N 224 N C N 225 N C N 226 N O N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N N N 241 S C N 242 N C N 243 N O N 244 N C N 245 N C N 246 N C N 247 N C N 248 N O N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N N N 263 S C N 264 N C N 265 N O N 266 N C N 267 N C N 268 N C N 269 N C N 270 N N N 271 N O N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N N N 288 S C N 289 N C N 290 N O N 291 N C N 292 N C N 293 N S N 294 N C N 295 N O N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 R C N 308 R C N 309 R C N 310 S C N 311 R C N 312 N C N 313 N C N 314 N C N 315 N N N 316 N O N 317 N O N 318 N O N 319 N O N 320 N O N 321 N O N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N N N 338 S C N 339 N C N 340 N O N 341 N C Y 342 N C Y 343 N C Y 344 N C Y 345 N C Y 346 N C Y 347 N C N 348 N O N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N N N 361 S C N 362 N C N 363 N O N 364 N C N 365 N C N 366 N C N 367 N O N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N N N 378 S C N 379 N C N 380 N O N 381 N C N 382 N O N 383 N O N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N C N 392 R C N 393 N C N 394 S C N 395 R C N 396 R C N 397 R C N 398 R C N 399 N C N 400 N C N 401 N C N 402 N N N 403 N O N 404 N O N 405 N O N 406 N O N 407 N O N 408 N O N 409 N O N 410 N O N 411 N O N 412 N H N 413 N H N 414 N H N 415 N H N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N N N 432 S C N 433 N C N 434 N O N 435 R C N 436 N O N 437 N C N 438 N O N 439 N H N 440 N H N 441 N H N 442 N H N 443 N H N 444 N H N 445 N H N 446 N H N 447 N H N 448 N N N 449 S C N 450 N C N 451 N O N 452 N C Y 453 N C Y 454 N C Y 455 N C Y 456 N N Y 457 N C Y 458 N C Y 459 N C Y 460 N C Y 461 N C N 462 N O N 463 N H N 464 N H N 465 N H N 466 N H N 467 N H N 468 N H N 469 N H N 470 N H N 471 N H N 472 N H N 473 N H N 474 N H N 475 N N N 476 S C N 477 N C N 478 N O N 479 N C Y 480 N C Y 481 N C Y 482 N C Y 483 N C Y 484 N C Y 485 N C N 486 N O N 487 N O N 488 N H N 489 N H N 490 N H N 491 N H N 492 N H N 493 N H N 494 N H N 495 N H N 496 N H N 497 N H N 498 N H N 499 N N N 500 S C N 501 N C N 502 N O N 503 N C N 504 N C N 505 N C N 506 N O N 507 N H N 508 N H N 509 N H N 510 N H N 511 N H N 512 N H N 513 N H N 514 N H N 515 N H N 516 N H N 517 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N doub N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N doub N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N doub N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N doub N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N doub N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N doub N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N doub N 193 N sing N 194 N sing N 195 N sing N 196 N sing Y 197 N sing Y 198 N doub Y 199 N doub N 200 N sing Y 201 N sing N 202 N sing Y 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N doub N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N doub N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N doub N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N doub N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N doub N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N doub N 331 N sing N 332 N sing N 333 N sing N 334 N sing Y 335 N doub Y 336 N sing Y 337 N sing N 338 N sing Y 339 N doub N 340 N sing Y 341 N doub N 342 N sing Y 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N doub N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N doub N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N doub N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N doub N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N doub N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N doub N 440 N sing N 441 N sing N 442 N sing N 443 N sing Y 444 N doub Y 445 N sing Y 446 N sing N 447 N sing Y 448 N doub Y 449 N sing Y 450 N sing N 451 N sing Y 452 N sing Y 453 N doub N 454 N sing Y 455 N doub N 456 N sing Y 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N sing N 462 N sing N 463 N sing N 464 N sing N 465 N sing N 466 N sing N 467 N doub N 468 N sing N 469 N sing N 470 N sing N 471 N sing Y 472 N doub Y 473 N sing Y 474 N sing N 475 N sing Y 476 N doub N 477 N sing Y 478 N doub N 479 N sing Y 480 N sing N 481 N sing N 482 N sing N 483 N sing N 484 N sing N 485 N sing N 486 N sing N 487 N sing N 488 N sing N 489 N sing N 490 N sing N 491 N doub N 492 N sing N 493 N sing N 494 N sing N 495 N sing N 496 N sing N 497 N sing N 498 N sing N 499 N sing N 500 N sing N 501 N sing N 502 N sing UK Nature NATUAS 0006 0028-0836 497 392 10.1038/NATURE12144 23615615 Receptor Binding by a Ferret-Transmissible H5 Avian Influenza Virus. 2013 10.2210/pdb4bgx/pdb pdb_00004bgx NAG B 1154 HAS WRONG CHIRALITY AT ATOM C1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 PIXEL 2012-04-23 DECTRIS PILATUS 2M SINGLE WAVELENGTH M x-ray 1 0.9173 1.0 I04-1 Diamond 0.9173 SYNCHROTRON DIAMOND BEAMLINE I04-1 36950.766 HEMAGGLUTININ HA1 OF TRYPSIN RELEASED ECTODOMAIN, RESIDUES 17-340 1 nat polymer 19097.990 HEMAGGLUTININ HA2 OF TRYPSIN RELEASED ECTODOMAIN, RESIDUES 347-512 1 nat polymer 471.411 N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose 1 man branched 221.208 2-acetamido-2-deoxy-beta-D-glucopyranose 3 man non-polymer 238.305 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID 1 syn non-polymer 18.015 water 211 nat water HAEMAGGLUTININ HA1 HAEMAGGLUTININ HA2 no no DQICIGYHANNSTEQVDTIMEKNVTVTHAQDILEKTHNGKLCDLDGVKPLILRDCSVAGWLLGNPMCDEFINVPEWSYIV EKANPVNDLCYPGDFNDYEELKHLLSRINHFEKIQIIPKSSWSSHEASLGVSSACPYQGKSSFFRNVVWLIKKNSTYPTI KRSYNNTNQEDLLVLWGIHHPNDAAEQTKLYQNPTTYISVGTSTLNQRLVPRIATRSKVNGQSGRMEFFWTILKPNDAIN FESNGNFIAPEYAYKIVKKGDSTIMKSELEYGNCNTKCQTPMGAINSSMPFHNIHPLTIGECPKYVKSNRLVLATGLRNS PQRETR DQICIGYHANNSTEQVDTIMEKNVTVTHAQDILEKTHNGKLCDLDGVKPLILRDCSVAGWLLGNPMCDEFINVPEWSYIV EKANPVNDLCYPGDFNDYEELKHLLSRINHFEKIQIIPKSSWSSHEASLGVSSACPYQGKSSFFRNVVWLIKKNSTYPTI KRSYNNTNQEDLLVLWGIHHPNDAAEQTKLYQNPTTYISVGTSTLNQRLVPRIATRSKVNGQSGRMEFFWTILKPNDAIN FESNGNFIAPEYAYKIVKKGDSTIMKSELEYGNCNTKCQTPMGAINSSMPFHNIHPLTIGECPKYVKSNRLVLATGLRNS PQRETR A polypeptide(L) no no GLFGAIAGFIEGGWQGMVDGWYGYHHSNEQGSGYAADKESTQKAIDGVTNKVNSIIDKMNTQFEAVGREFNNLERRIENL NKKMEDGFLDVWTYNAELLVLMENERTLDFHDSNVKNLYDKVRLQLRDNAKELGNGCFEFYHKCDNECMESVRNGTYDYP QYSEEA GLFGAIAGFIEGGWQGMVDGWYGYHHSNEQGSGYAADKESTQKAIDGVTNKVNSIIDKMNTQFEAVGREFNNLERRIENL NKKMEDGFLDVWTYNAELLVLMENERTLDFHDSNVKNLYDKVRLQLRDNAKELGNGCFEFYHKCDNECMESVRNGTYDYP QYSEEA B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n THE NATIONAL INSTITUTE FOR BIOLOGICAL STANDARDS AND CONTROL (NIBSC) sample 644788 INFLUENZA VIRUS A/VN/1194/04/NIBRG14 VACCINE STRAIN A/VIETNAM/1194/2004(H5N1) THE NATIONAL INSTITUTE FOR BIOLOGICAL STANDARDS AND CONTROL (NIBSC) sample 644788 INFLUENZA VIRUS A/VN/1194/04/NIBRG14 VACCINE STRAIN A/VIETNAM/1194/2004(H5N1) 1 3.98 69.07 NONE 0.1 M HEPES PH 7.0, 0.05 M MGCL2, 28-30% PEG 550 atom_site chem_comp database_PDB_caveat entity pdbx_branch_scheme pdbx_chem_comp_identifier pdbx_database_status pdbx_entity_branch pdbx_entity_branch_descriptor pdbx_entity_branch_link pdbx_entity_branch_list pdbx_entity_nonpoly pdbx_nonpoly_scheme pdbx_struct_assembly_gen pdbx_struct_special_symmetry struct_asym struct_conn struct_site struct_site_gen chem_comp chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model repository Initial release Carbohydrate remediation repository Remediation Database references Database references Database references Advisory Atomic model Data collection Derived calculations Other Structure summary Data collection Database references Refinement description Structure summary 1 0 2013-04-24 1 1 2013-05-08 1 2 2013-05-15 1 3 2013-05-22 2 0 2020-07-29 2 1 2023-12-20 _atom_site.B_iso_or_equiv _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.label_asym_id _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_entity_id _atom_site.type_symbol _chem_comp.name _chem_comp.type _database_PDB_caveat.text _pdbx_database_status.status_code_sf _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_special_symmetry.label_asym_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_role _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _chem_comp.pdbx_synonyms _database_2.pdbx_DOI _database_2.pdbx_database_accession A GAL 1323 n C GAL 1 A SIA 1322 n C SIA 2 DGalpb b-D-galactopyranose b-D-Galp Gal DGlcpNAcb N-acetyl-b-D-glucopyranosamine b-D-GlcpNAc GlcNAc DNeup5Aca N-acetyl-a-D-neuraminic acid a-D-Neup5Ac Neu5Ac STRUCTURE OF H5 (VN1194) INFLUENZA HAEMAGGLUTININ H5 (VN1194) INFLUENZA VIRUS HAEMAGGLUTININ IN COMPLEX WITH AVIAN RECEPTOR ANALOGUE 3'-SLN CRYSTAL STRUCTURE OF H5 (TYTY) INFLUENZA VIRUS HAEMAGGLUTININ H5 (TYTY) INFLUENZA VIRUS HAEMAGGLUTININ IN COMPLEX WITH HUMAN RECEPTOR ANALOGUE 6'-SLN H5 (TYTY) INFLUENZA VIRUS HAEMAGGLUTININ IN COMPLEX WITH AVIAN RECEPTOR ANALOGUE 3'-SLN CRYSTAL STRUCTURE OF THE HAEMAGGLUTININ FROM A TRANSMISSIBLE MUTANT H5 INFLUENZA VIRUS HAEMAGGLUTININ FROM A TRANSMISSIBLE MUTANT H5 INFLUENZA VIRUS IN COMPLEX WITH HUMAN RECEPTOR ANALOGUE 6'-SLN HAEMAGGLUTININ FROM A TRANSMISSIBLE MUTANT H5 INFLUENZA VIRUS IN COMPLEX WITH AVIAN RECEPTOR ANALOGUE 3'-SLN PDBE Y PDBE 2013-03-29 REL REL 1 B O HOH 2089 7.30 oligosaccharide DNeup5Aca2-6DGalpb1-ROH 3 GMML 1.0 Glycam Condensed Sequence WURCS=2.0/2,2,1/[a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O]/1-2/a6-b2 3 PDB2Glycan 1.1.0 WURCS [][b-D-Galp]{[(6+2)][a-D-Neup5Ac]{}} 3 PDB-CARE LINUCS C2 O6 SIA GAL 2 1 3 O2 HO6 sing n n NAG 2-acetamido-2-deoxy-beta-D-glucopyranose EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID HOH water MULTIBASIC SITE REMOVED 2IBX PDB ENTRY 2IBX PDB experimental model NAG 1023 4 NAG NAG 1023 A NAG 1165 4 NAG NAG 1165 A NAG 1154 4 NAG NAG 1154 B EPE 1163 5 EPE EPE 1163 B HOH 2001 6 HOH HOH 2001 A HOH 2002 6 HOH HOH 2002 A HOH 2003 6 HOH HOH 2003 A HOH 2004 6 HOH HOH 2004 A HOH 2005 6 HOH HOH 2005 A HOH 2006 6 HOH HOH 2006 A HOH 2007 6 HOH HOH 2007 A HOH 2008 6 HOH HOH 2008 A HOH 2009 6 HOH HOH 2009 A HOH 2010 6 HOH HOH 2010 A HOH 2011 6 HOH HOH 2011 A HOH 2012 6 HOH HOH 2012 A HOH 2013 6 HOH HOH 2013 A HOH 2014 6 HOH HOH 2014 A HOH 2015 6 HOH HOH 2015 A HOH 2016 6 HOH HOH 2016 A HOH 2017 6 HOH HOH 2017 A HOH 2018 6 HOH HOH 2018 A HOH 2019 6 HOH HOH 2019 A HOH 2020 6 HOH HOH 2020 A HOH 2021 6 HOH HOH 2021 A HOH 2022 6 HOH HOH 2022 A HOH 2023 6 HOH HOH 2023 A HOH 2024 6 HOH HOH 2024 A HOH 2025 6 HOH HOH 2025 A HOH 2026 6 HOH HOH 2026 A HOH 2027 6 HOH HOH 2027 A HOH 2028 6 HOH HOH 2028 A HOH 2029 6 HOH HOH 2029 A HOH 2030 6 HOH HOH 2030 A HOH 2031 6 HOH HOH 2031 A HOH 2032 6 HOH HOH 2032 A HOH 2033 6 HOH HOH 2033 A HOH 2034 6 HOH HOH 2034 A HOH 2035 6 HOH HOH 2035 A HOH 2036 6 HOH HOH 2036 A HOH 2037 6 HOH HOH 2037 A HOH 2038 6 HOH HOH 2038 A HOH 2039 6 HOH HOH 2039 A HOH 2040 6 HOH HOH 2040 A HOH 2041 6 HOH HOH 2041 A HOH 2042 6 HOH HOH 2042 A HOH 2043 6 HOH HOH 2043 A HOH 2044 6 HOH HOH 2044 A HOH 2045 6 HOH HOH 2045 A HOH 2046 6 HOH HOH 2046 A HOH 2047 6 HOH HOH 2047 A HOH 2048 6 HOH HOH 2048 A HOH 2049 6 HOH HOH 2049 A HOH 2050 6 HOH HOH 2050 A HOH 2051 6 HOH HOH 2051 A HOH 2052 6 HOH HOH 2052 A HOH 2053 6 HOH HOH 2053 A HOH 2054 6 HOH HOH 2054 A HOH 2055 6 HOH HOH 2055 A HOH 2056 6 HOH HOH 2056 A HOH 2057 6 HOH HOH 2057 A HOH 2058 6 HOH HOH 2058 A HOH 2059 6 HOH HOH 2059 A HOH 2060 6 HOH HOH 2060 A HOH 2061 6 HOH HOH 2061 A HOH 2062 6 HOH HOH 2062 A HOH 2063 6 HOH HOH 2063 A HOH 2064 6 HOH HOH 2064 A HOH 2065 6 HOH HOH 2065 A HOH 2066 6 HOH HOH 2066 A HOH 2067 6 HOH HOH 2067 A HOH 2068 6 HOH HOH 2068 A HOH 2069 6 HOH HOH 2069 A HOH 2070 6 HOH HOH 2070 A HOH 2071 6 HOH HOH 2071 A HOH 2072 6 HOH HOH 2072 A HOH 2073 6 HOH HOH 2073 A HOH 2074 6 HOH HOH 2074 A HOH 2075 6 HOH HOH 2075 A HOH 2076 6 HOH HOH 2076 A HOH 2077 6 HOH HOH 2077 A HOH 2078 6 HOH HOH 2078 A HOH 2079 6 HOH HOH 2079 A HOH 2080 6 HOH HOH 2080 A HOH 2081 6 HOH HOH 2081 A HOH 2082 6 HOH HOH 2082 A HOH 2083 6 HOH HOH 2083 A HOH 2084 6 HOH HOH 2084 A HOH 2085 6 HOH HOH 2085 A HOH 2086 6 HOH HOH 2086 A HOH 2087 6 HOH HOH 2087 A HOH 2088 6 HOH HOH 2088 A HOH 2089 6 HOH HOH 2089 A HOH 2090 6 HOH HOH 2090 A HOH 2091 6 HOH HOH 2091 A HOH 2092 6 HOH HOH 2092 A HOH 2093 6 HOH HOH 2093 A HOH 2094 6 HOH HOH 2094 A HOH 2095 6 HOH HOH 2095 A HOH 2096 6 HOH HOH 2096 A HOH 2097 6 HOH HOH 2097 A HOH 2098 6 HOH HOH 2098 A HOH 2099 6 HOH HOH 2099 A HOH 2100 6 HOH HOH 2100 A HOH 2101 6 HOH HOH 2101 A HOH 2102 6 HOH HOH 2102 A HOH 2103 6 HOH HOH 2103 A HOH 2104 6 HOH HOH 2104 A HOH 2105 6 HOH HOH 2105 A HOH 2106 6 HOH HOH 2106 A HOH 2107 6 HOH HOH 2107 A HOH 2108 6 HOH HOH 2108 A HOH 2109 6 HOH HOH 2109 A HOH 2110 6 HOH HOH 2110 A HOH 2111 6 HOH HOH 2111 A HOH 2112 6 HOH HOH 2112 A HOH 2113 6 HOH HOH 2113 A HOH 2114 6 HOH HOH 2114 A HOH 2115 6 HOH HOH 2115 A HOH 2116 6 HOH HOH 2116 A HOH 2117 6 HOH HOH 2117 A HOH 2118 6 HOH HOH 2118 A HOH 2119 6 HOH HOH 2119 A HOH 2120 6 HOH HOH 2120 A HOH 2121 6 HOH HOH 2121 A HOH 2122 6 HOH HOH 2122 A HOH 2001 6 HOH HOH 2001 B HOH 2002 6 HOH HOH 2002 B HOH 2003 6 HOH HOH 2003 B HOH 2004 6 HOH HOH 2004 B HOH 2005 6 HOH HOH 2005 B HOH 2006 6 HOH HOH 2006 B HOH 2007 6 HOH HOH 2007 B HOH 2008 6 HOH HOH 2008 B HOH 2009 6 HOH HOH 2009 B HOH 2010 6 HOH HOH 2010 B HOH 2011 6 HOH HOH 2011 B HOH 2012 6 HOH HOH 2012 B HOH 2013 6 HOH HOH 2013 B HOH 2014 6 HOH HOH 2014 B HOH 2015 6 HOH HOH 2015 B HOH 2016 6 HOH HOH 2016 B HOH 2017 6 HOH HOH 2017 B HOH 2018 6 HOH HOH 2018 B HOH 2019 6 HOH HOH 2019 B HOH 2020 6 HOH HOH 2020 B HOH 2021 6 HOH HOH 2021 B HOH 2022 6 HOH HOH 2022 B HOH 2023 6 HOH HOH 2023 B HOH 2024 6 HOH HOH 2024 B HOH 2025 6 HOH HOH 2025 B HOH 2026 6 HOH HOH 2026 B HOH 2027 6 HOH HOH 2027 B HOH 2028 6 HOH HOH 2028 B HOH 2029 6 HOH HOH 2029 B HOH 2030 6 HOH HOH 2030 B HOH 2031 6 HOH HOH 2031 B HOH 2032 6 HOH HOH 2032 B HOH 2033 6 HOH HOH 2033 B HOH 2034 6 HOH HOH 2034 B HOH 2035 6 HOH HOH 2035 B HOH 2036 6 HOH HOH 2036 B HOH 2037 6 HOH HOH 2037 B HOH 2038 6 HOH HOH 2038 B HOH 2039 6 HOH HOH 2039 B HOH 2040 6 HOH HOH 2040 B HOH 2041 6 HOH HOH 2041 B HOH 2042 6 HOH HOH 2042 B HOH 2043 6 HOH HOH 2043 B HOH 2044 6 HOH HOH 2044 B HOH 2045 6 HOH HOH 2045 B HOH 2046 6 HOH HOH 2046 B HOH 2047 6 HOH HOH 2047 B HOH 2048 6 HOH HOH 2048 B HOH 2049 6 HOH HOH 2049 B HOH 2050 6 HOH HOH 2050 B HOH 2051 6 HOH HOH 2051 B HOH 2052 6 HOH HOH 2052 B HOH 2053 6 HOH HOH 2053 B HOH 2054 6 HOH HOH 2054 B HOH 2055 6 HOH HOH 2055 B HOH 2056 6 HOH HOH 2056 B HOH 2057 6 HOH HOH 2057 B HOH 2058 6 HOH HOH 2058 B HOH 2059 6 HOH HOH 2059 B HOH 2060 6 HOH HOH 2060 B HOH 2061 6 HOH HOH 2061 B HOH 2062 6 HOH HOH 2062 B HOH 2063 6 HOH HOH 2063 B HOH 2064 6 HOH HOH 2064 B HOH 2065 6 HOH HOH 2065 B HOH 2066 6 HOH HOH 2066 B HOH 2067 6 HOH HOH 2067 B HOH 2068 6 HOH HOH 2068 B HOH 2069 6 HOH HOH 2069 B HOH 2070 6 HOH HOH 2070 B HOH 2071 6 HOH HOH 2071 B HOH 2072 6 HOH HOH 2072 B HOH 2073 6 HOH HOH 2073 B HOH 2074 6 HOH HOH 2074 B HOH 2075 6 HOH HOH 2075 B HOH 2076 6 HOH HOH 2076 B HOH 2077 6 HOH HOH 2077 B HOH 2078 6 HOH HOH 2078 B HOH 2079 6 HOH HOH 2079 B HOH 2080 6 HOH HOH 2080 B HOH 2081 6 HOH HOH 2081 B HOH 2082 6 HOH HOH 2082 B HOH 2083 6 HOH HOH 2083 B HOH 2084 6 HOH HOH 2084 B HOH 2085 6 HOH HOH 2085 B HOH 2086 6 HOH HOH 2086 B HOH 2087 6 HOH HOH 2087 B HOH 2088 6 HOH HOH 2088 B HOH 2089 6 HOH HOH 2089 B ASP 1 n 1 ASP 1 A GLN 2 n 2 GLN 2 A ILE 3 n 3 ILE 3 A CYS 4 n 4 CYS 4 A ILE 5 n 5 ILE 5 A GLY 6 n 6 GLY 6 A TYR 7 n 7 TYR 7 A HIS 8 n 8 HIS 8 A ALA 9 n 9 ALA 9 A ASN 10 n 10 ASN 10 A ASN 11 n 11 ASN 11 A SER 12 n 12 SER 12 A THR 13 n 13 THR 13 A GLU 14 n 14 GLU 14 A GLN 15 n 15 GLN 15 A VAL 16 n 16 VAL 16 A ASP 17 n 17 ASP 17 A THR 18 n 18 THR 18 A ILE 19 n 19 ILE 19 A MET 20 n 20 MET 20 A GLU 21 n 21 GLU 21 A LYS 22 n 22 LYS 22 A ASN 23 n 23 ASN 23 A VAL 24 n 24 VAL 24 A THR 25 n 25 THR 25 A VAL 26 n 26 VAL 26 A THR 27 n 27 THR 27 A HIS 28 n 28 HIS 28 A ALA 29 n 29 ALA 29 A GLN 30 n 30 GLN 30 A ASP 31 n 31 ASP 31 A ILE 32 n 32 ILE 32 A LEU 33 n 33 LEU 33 A GLU 34 n 34 GLU 34 A LYS 35 n 35 LYS 35 A THR 36 n 36 THR 36 A HIS 37 n 37 HIS 37 A ASN 38 n 38 ASN 38 A GLY 39 n 39 GLY 39 A LYS 40 n 40 LYS 40 A LEU 41 n 41 LEU 41 A CYS 42 n 42 CYS 42 A ASP 43 n 43 ASP 43 A LEU 44 n 44 LEU 44 A ASP 45 n 45 ASP 45 A GLY 46 n 46 GLY 46 A VAL 47 n 47 VAL 47 A LYS 48 n 48 LYS 48 A PRO 49 n 49 PRO 49 A LEU 50 n 50 LEU 50 A ILE 51 n 51 ILE 51 A LEU 52 n 52 LEU 52 A ARG 53 n 53 ARG 53 A ASP 54 n 54 ASP 54 A CYS 55 n 55 CYS 55 A SER 56 n 56 SER 56 A VAL 57 n 57 VAL 57 A ALA 58 n 58 ALA 58 A GLY 59 n 59 GLY 59 A TRP 60 n 60 TRP 60 A LEU 61 n 61 LEU 61 A LEU 62 n 62 LEU 62 A GLY 63 n 63 GLY 63 A ASN 64 n 64 ASN 64 A PRO 65 n 65 PRO 65 A MET 66 n 66 MET 66 A CYS 67 n 67 CYS 67 A ASP 68 n 68 ASP 68 A GLU 69 n 69 GLU 69 A PHE 70 n 70 PHE 70 A ILE 71 n 71 ILE 71 A ASN 72 n 72 ASN 72 A VAL 73 n 73 VAL 73 A PRO 74 n 74 PRO 74 A GLU 75 n 75 GLU 75 A TRP 76 n 76 TRP 76 A SER 77 n 77 SER 77 A TYR 78 n 78 TYR 78 A ILE 79 n 79 ILE 79 A VAL 80 n 80 VAL 80 A GLU 81 n 81 GLU 81 A LYS 82 n 82 LYS 82 A ALA 83 n 83 ALA 83 A ASN 84 n 84 ASN 84 A PRO 85 n 85 PRO 85 A VAL 86 n 86 VAL 86 A ASN 87 n 87 ASN 87 A ASP 88 n 88 ASP 88 A LEU 89 n 89 LEU 89 A CYS 90 n 90 CYS 90 A TYR 91 n 91 TYR 91 A PRO 92 n 92 PRO 92 A GLY 93 n 93 GLY 93 A ASP 94 n 94 ASP 94 A PHE 95 n 95 PHE 95 A ASN 96 n 96 ASN 96 A ASP 97 n 97 ASP 97 A TYR 98 n 98 TYR 98 A GLU 99 n 99 GLU 99 A GLU 100 n 100 GLU 100 A LEU 101 n 101 LEU 101 A LYS 102 n 102 LYS 102 A HIS 103 n 103 HIS 103 A LEU 104 n 104 LEU 104 A LEU 105 n 105 LEU 105 A SER 106 n 106 SER 106 A ARG 107 n 107 ARG 107 A ILE 108 n 108 ILE 108 A ASN 109 n 109 ASN 109 A HIS 110 n 110 HIS 110 A PHE 111 n 111 PHE 111 A GLU 112 n 112 GLU 112 A LYS 113 n 113 LYS 113 A ILE 114 n 114 ILE 114 A GLN 115 n 115 GLN 115 A ILE 116 n 116 ILE 116 A ILE 117 n 117 ILE 117 A PRO 118 n 118 PRO 118 A LYS 119 n 119 LYS 119 A SER 120 n 120 SER 120 A SER 121 n 121 SER 121 A TRP 122 n 122 TRP 122 A SER 123 n 123 SER 123 A SER 124 n 124 SER 124 A HIS 125 n 125 HIS 125 A GLU 126 n 126 GLU 126 A ALA 127 n 127 ALA 127 A SER 128 n 128 SER 128 A LEU 129 n 129 LEU 129 A GLY 130 n 130 GLY 130 A VAL 131 n 131 VAL 131 A SER 132 n 132 SER 132 A SER 133 n 133 SER 133 A ALA 134 n 134 ALA 134 A CYS 135 n 135 CYS 135 A PRO 136 n 136 PRO 136 A TYR 137 n 137 TYR 137 A GLN 138 n 138 GLN 138 A GLY 139 n 139 GLY 139 A LYS 140 n 140 LYS 140 A SER 141 n 141 SER 141 A SER 142 n 142 SER 142 A PHE 143 n 143 PHE 143 A PHE 144 n 144 PHE 144 A ARG 145 n 145 ARG 145 A ASN 146 n 146 ASN 146 A VAL 147 n 147 VAL 147 A VAL 148 n 148 VAL 148 A TRP 149 n 149 TRP 149 A LEU 150 n 150 LEU 150 A ILE 151 n 151 ILE 151 A LYS 152 n 152 LYS 152 A LYS 153 n 153 LYS 153 A ASN 154 n 154 ASN 154 A SER 155 n 155 SER 155 A THR 156 n 156 THR 156 A TYR 157 n 157 TYR 157 A PRO 158 n 158 PRO 158 A THR 159 n 159 THR 159 A ILE 160 n 160 ILE 160 A LYS 161 n 161 LYS 161 A ARG 162 n 162 ARG 162 A SER 163 n 163 SER 163 A TYR 164 n 164 TYR 164 A ASN 165 n 165 ASN 165 A ASN 166 n 166 ASN 166 A THR 167 n 167 THR 167 A ASN 168 n 168 ASN 168 A GLN 169 n 169 GLN 169 A GLU 170 n 170 GLU 170 A ASP 171 n 171 ASP 171 A LEU 172 n 172 LEU 172 A LEU 173 n 173 LEU 173 A VAL 174 n 174 VAL 174 A LEU 175 n 175 LEU 175 A TRP 176 n 176 TRP 176 A GLY 177 n 177 GLY 177 A ILE 178 n 178 ILE 178 A HIS 179 n 179 HIS 179 A HIS 180 n 180 HIS 180 A PRO 181 n 181 PRO 181 A ASN 182 n 182 ASN 182 A ASP 183 n 183 ASP 183 A ALA 184 n 184 ALA 184 A ALA 185 n 185 ALA 185 A GLU 186 n 186 GLU 186 A GLN 187 n 187 GLN 187 A THR 188 n 188 THR 188 A LYS 189 n 189 LYS 189 A LEU 190 n 190 LEU 190 A TYR 191 n 191 TYR 191 A GLN 192 n 192 GLN 192 A ASN 193 n 193 ASN 193 A PRO 194 n 194 PRO 194 A THR 195 n 195 THR 195 A THR 196 n 196 THR 196 A TYR 197 n 197 TYR 197 A ILE 198 n 198 ILE 198 A SER 199 n 199 SER 199 A VAL 200 n 200 VAL 200 A GLY 201 n 201 GLY 201 A THR 202 n 202 THR 202 A SER 203 n 203 SER 203 A THR 204 n 204 THR 204 A LEU 205 n 205 LEU 205 A ASN 206 n 206 ASN 206 A GLN 207 n 207 GLN 207 A ARG 208 n 208 ARG 208 A LEU 209 n 209 LEU 209 A VAL 210 n 210 VAL 210 A PRO 211 n 211 PRO 211 A ARG 212 n 212 ARG 212 A ILE 213 n 213 ILE 213 A ALA 214 n 214 ALA 214 A THR 215 n 215 THR 215 A ARG 216 n 216 ARG 216 A SER 217 n 217 SER 217 A LYS 218 n 218 LYS 218 A VAL 219 n 219 VAL 219 A ASN 220 n 220 ASN 220 A GLY 221 n 221 GLY 221 A GLN 222 n 222 GLN 222 A SER 223 n 223 SER 223 A GLY 224 n 224 GLY 224 A ARG 225 n 225 ARG 225 A MET 226 n 226 MET 226 A GLU 227 n 227 GLU 227 A PHE 228 n 228 PHE 228 A PHE 229 n 229 PHE 229 A TRP 230 n 230 TRP 230 A THR 231 n 231 THR 231 A ILE 232 n 232 ILE 232 A LEU 233 n 233 LEU 233 A LYS 234 n 234 LYS 234 A PRO 235 n 235 PRO 235 A ASN 236 n 236 ASN 236 A ASP 237 n 237 ASP 237 A ALA 238 n 238 ALA 238 A ILE 239 n 239 ILE 239 A ASN 240 n 240 ASN 240 A PHE 241 n 241 PHE 241 A GLU 242 n 242 GLU 242 A SER 243 n 243 SER 243 A ASN 244 n 244 ASN 244 A GLY 245 n 245 GLY 245 A ASN 246 n 246 ASN 246 A PHE 247 n 247 PHE 247 A ILE 248 n 248 ILE 248 A ALA 249 n 249 ALA 249 A PRO 250 n 250 PRO 250 A GLU 251 n 251 GLU 251 A TYR 252 n 252 TYR 252 A ALA 253 n 253 ALA 253 A TYR 254 n 254 TYR 254 A LYS 255 n 255 LYS 255 A ILE 256 n 256 ILE 256 A VAL 257 n 257 VAL 257 A LYS 258 n 258 LYS 258 A LYS 259 n 259 LYS 259 A GLY 260 n 260 GLY 260 A ASP 261 n 261 ASP 261 A SER 262 n 262 SER 262 A THR 263 n 263 THR 263 A ILE 264 n 264 ILE 264 A MET 265 n 265 MET 265 A LYS 266 n 266 LYS 266 A SER 267 n 267 SER 267 A GLU 268 n 268 GLU 268 A LEU 269 n 269 LEU 269 A GLU 270 n 270 GLU 270 A TYR 271 n 271 TYR 271 A GLY 272 n 272 GLY 272 A ASN 273 n 273 ASN 273 A CYS 274 n 274 CYS 274 A ASN 275 n 275 ASN 275 A THR 276 n 276 THR 276 A LYS 277 n 277 LYS 277 A CYS 278 n 278 CYS 278 A GLN 279 n 279 GLN 279 A THR 280 n 280 THR 280 A PRO 281 n 281 PRO 281 A MET 282 n 282 MET 282 A GLY 283 n 283 GLY 283 A ALA 284 n 284 ALA 284 A ILE 285 n 285 ILE 285 A ASN 286 n 286 ASN 286 A SER 287 n 287 SER 287 A SER 288 n 288 SER 288 A MET 289 n 289 MET 289 A PRO 290 n 290 PRO 290 A PHE 291 n 291 PHE 291 A HIS 292 n 292 HIS 292 A ASN 293 n 293 ASN 293 A ILE 294 n 294 ILE 294 A HIS 295 n 295 HIS 295 A PRO 296 n 296 PRO 296 A LEU 297 n 297 LEU 297 A THR 298 n 298 THR 298 A ILE 299 n 299 ILE 299 A GLY 300 n 300 GLY 300 A GLU 301 n 301 GLU 301 A CYS 302 n 302 CYS 302 A PRO 303 n 303 PRO 303 A LYS 304 n 304 LYS 304 A TYR 305 n 305 TYR 305 A VAL 306 n 306 VAL 306 A LYS 307 n 307 LYS 307 A SER 308 n 308 SER 308 A ASN 309 n 309 ASN 309 A ARG 310 n 310 ARG 310 A LEU 311 n 311 LEU 311 A VAL 312 n 312 VAL 312 A LEU 313 n 313 LEU 313 A ALA 314 n 314 ALA 314 A THR 315 n 315 THR 315 A GLY 316 n 316 GLY 316 A LEU 317 n 317 LEU 317 A ARG 318 n 318 ARG 318 A ASN 319 n 319 ASN 319 A SER 320 n 320 SER 320 A PRO 321 n 321 PRO 321 A n 322 322 A n 323 323 A n 324 324 A n 325 325 A n 326 326 A GLY 1 n 1 GLY 1 B LEU 2 n 2 LEU 2 B PHE 3 n 3 PHE 3 B GLY 4 n 4 GLY 4 B ALA 5 n 5 ALA 5 B ILE 6 n 6 ILE 6 B ALA 7 n 7 ALA 7 B GLY 8 n 8 GLY 8 B PHE 9 n 9 PHE 9 B ILE 10 n 10 ILE 10 B GLU 11 n 11 GLU 11 B GLY 12 n 12 GLY 12 B GLY 13 n 13 GLY 13 B TRP 14 n 14 TRP 14 B GLN 15 n 15 GLN 15 B GLY 16 n 16 GLY 16 B MET 17 n 17 MET 17 B VAL 18 n 18 VAL 18 B ASP 19 n 19 ASP 19 B GLY 20 n 20 GLY 20 B TRP 21 n 21 TRP 21 B TYR 22 n 22 TYR 22 B GLY 23 n 23 GLY 23 B TYR 24 n 24 TYR 24 B HIS 25 n 25 HIS 25 B HIS 26 n 26 HIS 26 B SER 27 n 27 SER 27 B ASN 28 n 28 ASN 28 B GLU 29 n 29 GLU 29 B GLN 30 n 30 GLN 30 B GLY 31 n 31 GLY 31 B SER 32 n 32 SER 32 B GLY 33 n 33 GLY 33 B TYR 34 n 34 TYR 34 B ALA 35 n 35 ALA 35 B ALA 36 n 36 ALA 36 B ASP 37 n 37 ASP 37 B LYS 38 n 38 LYS 38 B GLU 39 n 39 GLU 39 B SER 40 n 40 SER 40 B THR 41 n 41 THR 41 B GLN 42 n 42 GLN 42 B LYS 43 n 43 LYS 43 B ALA 44 n 44 ALA 44 B ILE 45 n 45 ILE 45 B ASP 46 n 46 ASP 46 B GLY 47 n 47 GLY 47 B VAL 48 n 48 VAL 48 B THR 49 n 49 THR 49 B ASN 50 n 50 ASN 50 B LYS 51 n 51 LYS 51 B VAL 52 n 52 VAL 52 B ASN 53 n 53 ASN 53 B SER 54 n 54 SER 54 B ILE 55 n 55 ILE 55 B ILE 56 n 56 ILE 56 B ASP 57 n 57 ASP 57 B LYS 58 n 58 LYS 58 B MET 59 n 59 MET 59 B ASN 60 n 60 ASN 60 B THR 61 n 61 THR 61 B GLN 62 n 62 GLN 62 B PHE 63 n 63 PHE 63 B GLU 64 n 64 GLU 64 B ALA 65 n 65 ALA 65 B VAL 66 n 66 VAL 66 B GLY 67 n 67 GLY 67 B ARG 68 n 68 ARG 68 B GLU 69 n 69 GLU 69 B PHE 70 n 70 PHE 70 B ASN 71 n 71 ASN 71 B ASN 72 n 72 ASN 72 B LEU 73 n 73 LEU 73 B GLU 74 n 74 GLU 74 B ARG 75 n 75 ARG 75 B ARG 76 n 76 ARG 76 B ILE 77 n 77 ILE 77 B GLU 78 n 78 GLU 78 B ASN 79 n 79 ASN 79 B LEU 80 n 80 LEU 80 B ASN 81 n 81 ASN 81 B LYS 82 n 82 LYS 82 B LYS 83 n 83 LYS 83 B MET 84 n 84 MET 84 B GLU 85 n 85 GLU 85 B ASP 86 n 86 ASP 86 B GLY 87 n 87 GLY 87 B PHE 88 n 88 PHE 88 B LEU 89 n 89 LEU 89 B ASP 90 n 90 ASP 90 B VAL 91 n 91 VAL 91 B TRP 92 n 92 TRP 92 B THR 93 n 93 THR 93 B TYR 94 n 94 TYR 94 B ASN 95 n 95 ASN 95 B ALA 96 n 96 ALA 96 B GLU 97 n 97 GLU 97 B LEU 98 n 98 LEU 98 B LEU 99 n 99 LEU 99 B VAL 100 n 100 VAL 100 B LEU 101 n 101 LEU 101 B MET 102 n 102 MET 102 B GLU 103 n 103 GLU 103 B ASN 104 n 104 ASN 104 B GLU 105 n 105 GLU 105 B ARG 106 n 106 ARG 106 B THR 107 n 107 THR 107 B LEU 108 n 108 LEU 108 B ASP 109 n 109 ASP 109 B PHE 110 n 110 PHE 110 B HIS 111 n 111 HIS 111 B ASP 112 n 112 ASP 112 B SER 113 n 113 SER 113 B ASN 114 n 114 ASN 114 B VAL 115 n 115 VAL 115 B LYS 116 n 116 LYS 116 B ASN 117 n 117 ASN 117 B LEU 118 n 118 LEU 118 B TYR 119 n 119 TYR 119 B ASP 120 n 120 ASP 120 B LYS 121 n 121 LYS 121 B VAL 122 n 122 VAL 122 B ARG 123 n 123 ARG 123 B LEU 124 n 124 LEU 124 B GLN 125 n 125 GLN 125 B LEU 126 n 126 LEU 126 B ARG 127 n 127 ARG 127 B ASP 128 n 128 ASP 128 B ASN 129 n 129 ASN 129 B ALA 130 n 130 ALA 130 B LYS 131 n 131 LYS 131 B GLU 132 n 132 GLU 132 B LEU 133 n 133 LEU 133 B GLY 134 n 134 GLY 134 B ASN 135 n 135 ASN 135 B GLY 136 n 136 GLY 136 B CYS 137 n 137 CYS 137 B PHE 138 n 138 PHE 138 B GLU 139 n 139 GLU 139 B PHE 140 n 140 PHE 140 B TYR 141 n 141 TYR 141 B HIS 142 n 142 HIS 142 B LYS 143 n 143 LYS 143 B CYS 144 n 144 CYS 144 B ASP 145 n 145 ASP 145 B ASN 146 n 146 ASN 146 B GLU 147 n 147 GLU 147 B CYS 148 n 148 CYS 148 B MET 149 n 149 MET 149 B GLU 150 n 150 GLU 150 B SER 151 n 151 SER 151 B VAL 152 n 152 VAL 152 B ARG 153 n 153 ARG 153 B ASN 154 n 154 ASN 154 B GLY 155 n 155 GLY 155 B THR 156 n 156 THR 156 B TYR 157 n 157 TYR 157 B ASP 158 n 158 ASP 158 B TYR 159 n 159 TYR 159 B PRO 160 n 160 PRO 160 B GLN 161 n 161 GLN 161 B TYR 162 n 162 TYR 162 B n 163 163 B n 164 164 B n 165 165 B n 166 166 B 0.4270 -0.0457 -0.3819 0.2167 0.1270 4.7855 0.0415 -0.2430 0.1068 0.1644 -0.0769 0.1442 -0.5871 -0.8134 0.0354 0.4095 0.1056 0.0305 0.4680 -0.1242 0.3302 refined 34.3807 -14.0801 -18.8127 X-RAY DIFFRACTION 2.3353 0.1802 -0.0773 3.2549 -0.9585 1.8207 -0.0307 -0.4148 0.0690 0.8272 -0.1521 0.1352 -0.0569 -0.5459 0.1827 0.7568 0.0261 0.1209 0.9080 -0.1321 0.2363 refined 32.2627 -21.5677 16.4463 X-RAY DIFFRACTION 1.2749 -0.1683 -1.5059 0.5821 2.5396 12.5829 0.1380 -0.3911 0.2266 0.0479 -0.1247 0.1445 -0.2014 -0.4945 -0.0132 0.3651 0.1280 0.0746 0.3160 -0.0753 0.3722 refined 35.5691 -14.7490 -26.9442 X-RAY DIFFRACTION 3.1492 -1.6816 1.8064 3.5950 -2.3312 9.6241 -0.0347 0.0732 -0.0840 0.1610 -0.0937 0.2815 -0.1650 -1.0637 0.1283 0.0596 0.0201 -0.0274 0.1732 -0.0906 0.2880 refined 36.1940 -21.0566 -58.6731 X-RAY DIFFRACTION 8.2666 0.7345 5.1243 4.4148 0.6979 16.9038 -0.1000 -0.1482 0.2744 -0.1467 -0.2171 0.4856 -0.5952 -0.9255 0.3171 0.3178 0.0163 0.0106 0.2620 -0.0371 0.2238 refined 48.1596 -22.7221 -10.4025 X-RAY DIFFRACTION 2.1630 -0.2045 2.3047 1.2053 -0.9123 18.2112 0.0160 0.2402 -0.0161 -0.0856 -0.1222 -0.0199 0.1323 0.4247 0.1061 0.0118 0.0149 0.0027 0.0416 -0.0009 0.2172 refined 44.5280 -23.9884 -56.7188 X-RAY DIFFRACTION 8.2369 -5.5888 -1.1529 16.1201 1.2281 11.9895 0.2445 1.4227 -1.4591 -0.6736 -0.4286 0.8139 1.0068 -0.9082 0.1841 0.3515 0.0608 -0.1784 0.7010 -0.2448 0.5519 refined 31.5088 -26.1711 -80.5988 X-RAY DIFFRACTION A 1 A 105 X-RAY DIFFRACTION 1 A 106 A 262 X-RAY DIFFRACTION 2 A 263 A 321 X-RAY DIFFRACTION 3 B 1 B 60 X-RAY DIFFRACTION 4 B 61 B 84 X-RAY DIFFRACTION 5 B 85 B 141 X-RAY DIFFRACTION 6 B 142 B 163 X-RAY DIFFRACTION 7 author_and_software_defined_assembly PISA 6 hexameric 33330 -90.1 59180 A ASN 23 GLYCOSYLATION SITE A ASN 23 ASN A ASN 165 GLYCOSYLATION SITE A ASN 165 ASN B ASN 154 GLYCOSYLATION SITE B ASN 154 ASN 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -0.5000000000 -0.8660254038 0.0000000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 2_545 -y,x-y-1,z crystal symmetry operation 50.6690000000 -87.7612823687 0.0000000000 -0.5000000000 0.8660254038 0.0000000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 3_655 -x+y+1,-x,z crystal symmetry operation 101.3380000000 0.0000000000 0.0000000000 B N ALA 35 B N ALA 35 B O TYR 24 B O TYR 24 B N SER 27 B N SER 27 A O GLN 2 A O GLN 2 A N ILE 3 A N ILE 3 B O PHE 138 B O PHE 138 B N GLU 139 B N GLU 139 B O LYS 131 B O LYS 131 A N VAL 16 A N VAL 16 A O VAL 24 A O VAL 24 A N GLN 30 A N GLN 30 A O LEU 313 A O LEU 313 A N GLU 34 A N GLU 34 A O PHE 291 A O PHE 291 A N HIS 292 A N HIS 292 A O LYS 304 A O LYS 304 A O LEU 41 A O LEU 41 A N GLY 272 A N GLY 272 A O LEU 50 A O LEU 50 A N VAL 80 A N VAL 80 A N GLU 81 A N GLU 81 A O MET 265 A O MET 265 A N ASP 94 A N ASP 94 A O MET 226 A O MET 226 A N LEU 233 A N LEU 233 A O LEU 172 A O LEU 172 A N GLY 177 A N GLY 177 A O ILE 248 A O ILE 248 A N ALA 249 A N ALA 249 A O VAL 148 A O VAL 148 A N ASP 94 A N ASP 94 A O MET 226 A O MET 226 A N LEU 233 A N LEU 233 A O LEU 172 A O LEU 172 A N LEU 173 A N LEU 173 A O TYR 254 A O TYR 254 A O LYS 258 A O LYS 258 A N ASN 109 A N ASN 109 A N TYR 137 A N TYR 137 A O LYS 140 A O LYS 140 A N TYR 164 A N TYR 164 A O ILE 239 A O ILE 239 A N GLU 242 A N GLU 242 A O SER 199 A O SER 199 A N VAL 200 A N VAL 200 A O GLN 207 A O GLN 207 A N GLY 283 A N GLY 283 A O THR 280 A O THR 280 A N GLN 279 A N GLN 279 A O ILE 299 A O ILE 299 1 B HOH 2023 I HOH 1 B HOH 2025 I HOH 1 B HOH 2058 I HOH 1 A GLN 322 A GLN 322 1 Y 1 A ARG 323 A ARG 323 1 Y 1 A GLU 324 A GLU 324 1 Y 1 A THR 325 A THR 325 1 Y 1 A ARG 326 A ARG 326 1 Y 1 B SER 163 B SER 163 1 Y 1 B GLU 164 B GLU 164 1 Y 1 B GLU 165 B GLU 165 1 Y 1 B ALA 166 B ALA 166 1 Y 1 B C1 NAG 1154 WRONG HAND 1 A A O O HOH HOH 2033 2061 1.96 1 B B O O HOH HOH 2027 2028 2.03 1 B B O O HOH HOH 2004 2005 2.05 1 A A OD1 ND2 ASN ASN 166 168 2.11 1 A A ASN CYS 273 274 -139.21 1 A ARG 53 59.69 -111.16 1 A ASP 88 -104.80 -123.88 1 A CYS 135 -115.83 71.21 1 A PHE 144 -38.50 116.06 1 A ASP 171 -38.75 142.53 1 A GLN 192 66.63 -67.54 1 A ASN 273 57.58 82.11 1 A CYS 274 -170.97 148.69 1 B ARG 127 47.30 -121.83 1 B ASP 145 -68.75 -177.88 76.792 2.17 2.17 0.00 2.17 0.00 -7.05 0.956 0.948 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.U VALUES WITH TLS ADDED 0.21776 0.19361 0.19480 2.48 37.18 1634 30613 5.1 99.82 13.959 0.159 RANDOM 1 THROUGHOUT MOLECULAR REPLACEMENT 0.267 0.203 0.80 0.80 1.20 PDB ENTRY 2IBX MAXIMUM LIKELIHOOD MASK 2.48 37.18 211 4159 89 0 3859 0.008 0.019 4051 0.001 0.020 3725 1.245 1.962 5498 0.711 3.003 8569 6.190 5.000 483 37.265 25.174 201 15.720 15.000 678 15.902 15.000 17 0.065 0.200 593 0.004 0.020 4603 0.001 0.020 943 1.388 3.375 1932 1.386 3.374 1931 2.250 5.060 2412 2.257 3.795 2119 0.331 0.306 2.544 108 2229 20 99.91 2.48 37.15 4BGX 32249 3.0 0.07 1 17.20 9.2 99.9 0.63 2.48 2.61 3.00 1 7.9 99.8 refinement REFMAC 5.7.0032 data reduction MOSFLM data scaling SCALA phasing PHASER H5 (VN1194) Influenza Virus Haemagglutinin in Complex with Human Receptor Analogue 6'-SLN 1 N N 2 N N 3 N N 4 N N 4 N N 4 N N 5 N N 6 N N 6 N N A SER 56 A SER 56 HELX_P A GLY 63 A GLY 63 1 1 8 A ASN 64 A ASN 64 HELX_P A ILE 71 A ILE 71 5 2 8 A ASP 97 A ASP 97 HELX_P A SER 106 A SER 106 1 3 10 A ASP 183 A ASP 183 HELX_P A GLN 192 A GLN 192 1 4 10 B ASP 37 B ASP 37 HELX_P B MET 59 B MET 59 1 5 23 B GLU 74 B GLU 74 HELX_P B ARG 127 B ARG 127 1 6 54 B ASP 145 B ASP 145 HELX_P B ASN 154 B ASN 154 1 7 10 disulf 2.132 A CYS 4 A SG CYS 4 1_555 B CYS 137 B SG CYS 137 1_555 disulf 2.050 A CYS 42 A SG CYS 42 1_555 A CYS 274 A SG CYS 274 1_555 disulf 2.046 A CYS 55 A SG CYS 55 1_555 A CYS 67 A SG CYS 67 1_555 disulf 2.073 A CYS 90 A SG CYS 90 1_555 A CYS 135 A SG CYS 135 1_555 disulf 2.077 A CYS 278 A SG CYS 278 1_555 A CYS 302 A SG CYS 302 1_555 disulf 2.049 B CYS 144 B SG CYS 144 1_555 B CYS 148 B SG CYS 148 1_555 covale 1.449 one N-Glycosylation A ASN 23 A ND2 ASN 23 1_555 A NAG 1023 D C1 NAG 1_555 covale 1.437 one N-Glycosylation A ASN 165 A ND2 ASN 165 1_555 A NAG 1165 E C1 NAG 1_555 covale 1.436 one N-Glycosylation B ASN 154 B ND2 ASN 154 1_555 B NAG 1154 F C1 NAG 1_555 covale 1.424 both C GAL 1 C O6 GAL 1_555 C SIA 2 C C2 SIA 1_555 VIRAL PROTEIN VIRAL PROTEIN, N-GLYCOSYLATION, VIRUS RECEPTOR, BIRD FLU Q6DQ34_9INFA UNP 1 Q6DQ34 Q6DQ34_9INFA UNP 2 Q6DQ34 17 342 4BGX 1 326 Q6DQ34 A 1 1 326 347 512 4BGX 1 166 Q6DQ34 B 2 1 166 1 ARG conflict THR 325 4BGX A Q6DQ34 UNP 341 325 5 2 2 3 2 3 5 5 2 4 3 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel parallel parallel parallel parallel parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel B GLY 31 B GLY 31 B ALA 36 B ALA 36 B TYR 22 B TYR 22 B ASN 28 B ASN 28 A GLN 2 A GLN 2 A TYR 7 A TYR 7 B CYS 137 B CYS 137 B PHE 140 B PHE 140 B ALA 130 B ALA 130 B GLU 132 B GLU 132 A GLN 15 A GLN 15 A VAL 16 A VAL 16 A VAL 24 A VAL 24 A THR 25 A THR 25 A ALA 29 A ALA 29 A ASP 31 A ASP 31 A VAL 312 A VAL 312 A ALA 314 A ALA 314 A LEU 33 A LEU 33 A GLU 34 A GLU 34 A PHE 291 A PHE 291 A HIS 292 A HIS 292 A LYS 304 A LYS 304 A TYR 305 A TYR 305 A LEU 41 A LEU 41 A LEU 44 A LEU 44 A TYR 271 A TYR 271 A THR 276 A THR 276 A LEU 50 A LEU 50 A ILE 51 A ILE 51 A ILE 79 A ILE 79 A GLU 81 A GLU 81 A ILE 264 A ILE 264 A LYS 266 A LYS 266 A GLY 93 A GLY 93 A PHE 95 A PHE 95 A ARG 225 A ARG 225 A LEU 233 A LEU 233 A LEU 172 A LEU 172 A HIS 180 A HIS 180 A PHE 247 A PHE 247 A PRO 250 A PRO 250 A VAL 147 A VAL 147 A TRP 149 A TRP 149 A GLY 93 A GLY 93 A PHE 95 A PHE 95 A ARG 225 A ARG 225 A LEU 233 A LEU 233 A LEU 172 A LEU 172 A HIS 180 A HIS 180 A TYR 252 A TYR 252 A LYS 259 A LYS 259 A ILE 108 A ILE 108 A GLN 115 A GLN 115 A SER 132 A SER 132 A TYR 137 A TYR 137 A LYS 140 A LYS 140 A SER 142 A SER 142 A ILE 160 A ILE 160 A ASN 165 A ASN 165 A ALA 238 A ALA 238 A SER 243 A SER 243 A ILE 198 A ILE 198 A GLY 201 A GLY 201 A ASN 206 A ASN 206 A LEU 209 A LEU 209 A GLY 283 A GLY 283 A ALA 284 A ALA 284 A CYS 278 A CYS 278 A THR 280 A THR 280 A ILE 299 A ILE 299 A GLY 300 A GLY 300 155 H 3 2