1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Lukavsky, P.J.
Daujotyte, D.
Tollervey, J.R.
Ule, J.
Stuani, C.
Buratti, E.
Baralle, F.E.
Damberger, F.F.
Allain, F.H.T.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C10 H14 N5 O7 P
347.221
y
ADENOSINE-5'-MONOPHOSPHATE
RNA linking
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C10 H14 N5 O8 P
363.221
y
GUANOSINE-5'-MONOPHOSPHATE
RNA linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C9 H13 N2 O9 P
324.181
y
URIDINE-5'-MONOPHOSPHATE
RNA linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Nat.Struct.Mol.Biol.
1545-9993
20
1443
10.1038/NSMB.2698
24240615
Molecular Basis of Ug-Rich RNA Recognition by the Human Splicing Factor Tdp-43
2013
10.2210/pdb4bs2/pdb
pdb_00004bs2
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
19995.734
TAR DNA-BINDING PROTEIN 43
RNA BINDING DOMAIN, RESIDUES 102-269
1
man
polymer
3877.352
5'-R(*GP*UP*GP*UP*GP*AP*AP*UP*GP*AP*AP*UP)-3'
1
syn
polymer
TDP-43, TDP-43 TANDEM RRMS
UG-RICH RNA
no
no
GSHMASKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDC
KLPNSKQSQDEPLRSRKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSLCGEDLIIKGISV
HISNAEPKHNSNRQ
GSHMASKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDC
KLPNSKQSQDEPLRSRKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSLCGEDLIIKGISV
HISNAEPKHNSNRQ
A
polypeptide(L)
no
no
GUGUGAAUGAAU
GUGUGAAUGAAU
B
polyribonucleotide
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
HUMAN
sample
9606
HOMO SAPIENS
469008
ESCHERICHIA COLI
BL21(DE3)
RIL
PET-28A
PLASMID
database_2
pdbx_database_status
pdbx_nmr_software
pdbx_nmr_spectrometer
repository
Initial release
Database references
Database references
Database references
Atomic model
Other
Data collection
Database references
Other
1
0
2013-11-13
1
1
2013-11-20
1
2
2013-11-27
1
3
2013-12-18
1
4
2016-05-04
1
5
2023-06-14
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.status_code_cs
_pdbx_database_status.status_code_mr
_pdbx_database_status.status_code_nmr_data
_pdbx_nmr_software.name
_pdbx_nmr_spectrometer.model
PDBE
Y
PDBE
2013-06-06
REL
REL
REL
REL
9606
HUMAN
HOMO SAPIENS
sample
MEASUREMENTS WERE PERFORMED ON THREE DIFFERENT SAMPLES,15N -LABELLED TDP-43 WITH UNLABELLED RNA, 13C,15N- LABELLED TDP-43 WITH UNLABELLED RNA, 15N-LABELLED TDP-43 WITH 13C,15N-LABELLED RNA
LOWEST ENERGY AND RESTRAINT VIOLATION
50
20
3D C13-EDITED NOESY
3D N15- EDITED NOESY
2D NOESY
2D TOCSY
3D HCCH-TOCSY
50
mM
6.8
pH
298.0
K
SIMULATED ANNEALING COMBINED WITH MOLECULAR DYNAMICS IN TORSION ANGLE SPACE
1
94%WATER/6%D2O
CASE ET AL
refinement
Amber
structure solution
CYANA
900
Bruker
AVANCE
GLY
96
n
1
GLY
96
A
SER
97
n
2
SER
97
A
HIS
98
n
3
HIS
98
A
MET
99
n
4
MET
99
A
ALA
100
n
5
ALA
100
A
SER
101
n
6
SER
101
A
LYS
102
n
7
LYS
102
A
THR
103
n
8
THR
103
A
SER
104
n
9
SER
104
A
ASP
105
n
10
ASP
105
A
LEU
106
n
11
LEU
106
A
ILE
107
n
12
ILE
107
A
VAL
108
n
13
VAL
108
A
LEU
109
n
14
LEU
109
A
GLY
110
n
15
GLY
110
A
LEU
111
n
16
LEU
111
A
PRO
112
n
17
PRO
112
A
TRP
113
n
18
TRP
113
A
LYS
114
n
19
LYS
114
A
THR
115
n
20
THR
115
A
THR
116
n
21
THR
116
A
GLU
117
n
22
GLU
117
A
GLN
118
n
23
GLN
118
A
ASP
119
n
24
ASP
119
A
LEU
120
n
25
LEU
120
A
LYS
121
n
26
LYS
121
A
GLU
122
n
27
GLU
122
A
TYR
123
n
28
TYR
123
A
PHE
124
n
29
PHE
124
A
SER
125
n
30
SER
125
A
THR
126
n
31
THR
126
A
PHE
127
n
32
PHE
127
A
GLY
128
n
33
GLY
128
A
GLU
129
n
34
GLU
129
A
VAL
130
n
35
VAL
130
A
LEU
131
n
36
LEU
131
A
MET
132
n
37
MET
132
A
VAL
133
n
38
VAL
133
A
GLN
134
n
39
GLN
134
A
VAL
135
n
40
VAL
135
A
LYS
136
n
41
LYS
136
A
LYS
137
n
42
LYS
137
A
ASP
138
n
43
ASP
138
A
LEU
139
n
44
LEU
139
A
LYS
140
n
45
LYS
140
A
THR
141
n
46
THR
141
A
GLY
142
n
47
GLY
142
A
HIS
143
n
48
HIS
143
A
SER
144
n
49
SER
144
A
LYS
145
n
50
LYS
145
A
GLY
146
n
51
GLY
146
A
PHE
147
n
52
PHE
147
A
GLY
148
n
53
GLY
148
A
PHE
149
n
54
PHE
149
A
VAL
150
n
55
VAL
150
A
ARG
151
n
56
ARG
151
A
PHE
152
n
57
PHE
152
A
THR
153
n
58
THR
153
A
GLU
154
n
59
GLU
154
A
TYR
155
n
60
TYR
155
A
GLU
156
n
61
GLU
156
A
THR
157
n
62
THR
157
A
GLN
158
n
63
GLN
158
A
VAL
159
n
64
VAL
159
A
LYS
160
n
65
LYS
160
A
VAL
161
n
66
VAL
161
A
MET
162
n
67
MET
162
A
SER
163
n
68
SER
163
A
GLN
164
n
69
GLN
164
A
ARG
165
n
70
ARG
165
A
HIS
166
n
71
HIS
166
A
MET
167
n
72
MET
167
A
ILE
168
n
73
ILE
168
A
ASP
169
n
74
ASP
169
A
GLY
170
n
75
GLY
170
A
ARG
171
n
76
ARG
171
A
TRP
172
n
77
TRP
172
A
CYS
173
n
78
CYS
173
A
ASP
174
n
79
ASP
174
A
CYS
175
n
80
CYS
175
A
LYS
176
n
81
LYS
176
A
LEU
177
n
82
LEU
177
A
PRO
178
n
83
PRO
178
A
ASN
179
n
84
ASN
179
A
SER
180
n
85
SER
180
A
LYS
181
n
86
LYS
181
A
GLN
182
n
87
GLN
182
A
SER
183
n
88
SER
183
A
GLN
184
n
89
GLN
184
A
ASP
185
n
90
ASP
185
A
GLU
186
n
91
GLU
186
A
PRO
187
n
92
PRO
187
A
LEU
188
n
93
LEU
188
A
ARG
189
n
94
ARG
189
A
SER
190
n
95
SER
190
A
ARG
191
n
96
ARG
191
A
LYS
192
n
97
LYS
192
A
VAL
193
n
98
VAL
193
A
PHE
194
n
99
PHE
194
A
VAL
195
n
100
VAL
195
A
GLY
196
n
101
GLY
196
A
ARG
197
n
102
ARG
197
A
CYS
198
n
103
CYS
198
A
THR
199
n
104
THR
199
A
GLU
200
n
105
GLU
200
A
ASP
201
n
106
ASP
201
A
MET
202
n
107
MET
202
A
THR
203
n
108
THR
203
A
GLU
204
n
109
GLU
204
A
ASP
205
n
110
ASP
205
A
GLU
206
n
111
GLU
206
A
LEU
207
n
112
LEU
207
A
ARG
208
n
113
ARG
208
A
GLU
209
n
114
GLU
209
A
PHE
210
n
115
PHE
210
A
PHE
211
n
116
PHE
211
A
SER
212
n
117
SER
212
A
GLN
213
n
118
GLN
213
A
TYR
214
n
119
TYR
214
A
GLY
215
n
120
GLY
215
A
ASP
216
n
121
ASP
216
A
VAL
217
n
122
VAL
217
A
MET
218
n
123
MET
218
A
ASP
219
n
124
ASP
219
A
VAL
220
n
125
VAL
220
A
PHE
221
n
126
PHE
221
A
ILE
222
n
127
ILE
222
A
PRO
223
n
128
PRO
223
A
LYS
224
n
129
LYS
224
A
PRO
225
n
130
PRO
225
A
PHE
226
n
131
PHE
226
A
ARG
227
n
132
ARG
227
A
ALA
228
n
133
ALA
228
A
PHE
229
n
134
PHE
229
A
ALA
230
n
135
ALA
230
A
PHE
231
n
136
PHE
231
A
VAL
232
n
137
VAL
232
A
THR
233
n
138
THR
233
A
PHE
234
n
139
PHE
234
A
ALA
235
n
140
ALA
235
A
ASP
236
n
141
ASP
236
A
ASP
237
n
142
ASP
237
A
GLN
238
n
143
GLN
238
A
ILE
239
n
144
ILE
239
A
ALA
240
n
145
ALA
240
A
GLN
241
n
146
GLN
241
A
SER
242
n
147
SER
242
A
LEU
243
n
148
LEU
243
A
CYS
244
n
149
CYS
244
A
GLY
245
n
150
GLY
245
A
GLU
246
n
151
GLU
246
A
ASP
247
n
152
ASP
247
A
LEU
248
n
153
LEU
248
A
ILE
249
n
154
ILE
249
A
ILE
250
n
155
ILE
250
A
LYS
251
n
156
LYS
251
A
GLY
252
n
157
GLY
252
A
ILE
253
n
158
ILE
253
A
SER
254
n
159
SER
254
A
VAL
255
n
160
VAL
255
A
HIS
256
n
161
HIS
256
A
ILE
257
n
162
ILE
257
A
SER
258
n
163
SER
258
A
ASN
259
n
164
ASN
259
A
ALA
260
n
165
ALA
260
A
GLU
261
n
166
GLU
261
A
PRO
262
n
167
PRO
262
A
LYS
263
n
168
LYS
263
A
HIS
264
n
169
HIS
264
A
ASN
265
n
170
ASN
265
A
SER
266
n
171
SER
266
A
ASN
267
n
172
ASN
267
A
ARG
268
n
173
ARG
268
A
GLN
269
n
174
GLN
269
A
G
1
n
1
G
1
B
U
2
n
2
U
2
B
G
3
n
3
G
3
B
U
4
n
4
U
4
B
G
5
n
5
G
5
B
A
6
n
6
A
6
B
A
7
n
7
A
7
B
U
8
n
8
U
8
B
G
9
n
9
G
9
B
A
10
n
10
A
10
B
A
11
n
11
A
11
B
U
12
n
12
U
12
B
author_and_software_defined_assembly
PQS
2
dimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
LYS
136
A
N
LYS
41
A
O
PHE
147
A
O
PHE
52
A
N
VAL
150
A
N
VAL
55
A
O
LEU
106
A
O
LEU
11
A
N
LEU
109
A
N
LEU
14
A
O
ASP
174
A
O
ASP
79
A
N
CYS
173
A
N
CYS
78
A
O
HIS
166
A
O
HIS
71
A
N
PHE
221
A
N
PHE
126
A
O
PHE
231
A
O
PHE
136
A
N
VAL
232
A
N
VAL
137
A
O
VAL
193
A
O
VAL
98
A
N
GLY
196
A
N
GLY
101
A
O
HIS
256
A
O
HIS
161
A
N
VAL
255
A
N
VAL
160
A
O
LEU
248
A
O
LEU
153
3
A
A
OD1
HG
ASP
SER
105
254
1.52
13
B
B
HO2'
OP2
U
G
2
3
1.58
16
B
B
HO2'
OP1
G
U
3
4
1.55
6
B
A
6
0.069
SIDE CHAIN
7
B
A
6
0.065
SIDE CHAIN
13
B
A
6
0.063
SIDE CHAIN
17
B
G
9
0.062
SIDE CHAIN
20
B
G
9
0.061
SIDE CHAIN
1
-4.40
0.70
109.70
105.30
B
B
B
C1'
O4'
C4'
G
G
G
5
5
5
N
1
-5.43
0.70
101.30
95.87
B
B
B
C3'
C2'
C1'
G
G
G
5
5
5
N
2
-4.24
0.70
109.70
105.46
B
B
B
C1'
O4'
C4'
G
G
G
5
5
5
N
2
-5.10
0.70
101.30
96.20
B
B
B
C3'
C2'
C1'
G
G
G
5
5
5
N
2
4.46
0.70
108.50
112.96
B
B
B
O4'
C1'
N9
A
A
A
7
7
7
N
3
-5.36
0.70
109.70
104.34
B
B
B
C1'
O4'
C4'
G
G
G
3
3
3
N
3
4.72
0.70
108.50
113.22
B
B
B
O4'
C1'
N9
G
G
G
3
3
3
N
3
6.21
0.90
109.80
116.01
B
B
B
C5'
C4'
O4'
G
G
G
5
5
5
N
3
-4.56
0.70
109.70
105.14
B
B
B
C1'
O4'
C4'
G
G
G
5
5
5
N
4
-4.92
0.70
109.70
104.78
B
B
B
C1'
O4'
C4'
G
G
G
5
5
5
N
5
-4.81
0.70
109.70
104.89
B
B
B
C1'
O4'
C4'
G
G
G
5
5
5
N
6
-4.97
0.70
109.70
104.73
B
B
B
C1'
O4'
C4'
G
G
G
3
3
3
N
6
4.50
0.70
108.50
113.00
B
B
B
O4'
C1'
N9
G
G
G
5
5
5
N
6
4.72
0.70
108.50
113.22
B
B
B
O4'
C1'
N9
G
G
G
9
9
9
N
8
4.94
0.70
108.50
113.44
B
B
B
O4'
C1'
N9
G
G
G
5
5
5
N
8
4.91
0.70
108.50
113.41
B
B
B
O4'
C1'
N9
A
A
A
10
10
10
N
9
-5.12
0.70
109.70
104.58
B
B
B
C1'
O4'
C4'
G
G
G
3
3
3
N
9
4.51
0.70
108.50
113.01
B
B
B
O4'
C1'
N9
A
A
A
7
7
7
N
9
4.53
0.70
108.50
113.03
B
B
B
O4'
C1'
N9
G
G
G
9
9
9
N
10
-4.75
0.70
109.70
104.95
B
B
B
C1'
O4'
C4'
G
G
G
5
5
5
N
10
-5.33
0.70
101.30
95.97
B
B
B
C3'
C2'
C1'
G
G
G
5
5
5
N
10
5.35
0.70
108.50
113.85
B
B
B
O4'
C1'
N9
G
G
G
5
5
5
N
11
-4.58
0.70
109.70
105.12
B
B
B
C1'
O4'
C4'
G
G
G
3
3
3
N
11
-4.98
0.70
109.70
104.72
B
B
B
C1'
O4'
C4'
G
G
G
5
5
5
N
11
-5.06
0.70
101.30
96.24
B
B
B
C3'
C2'
C1'
G
G
G
5
5
5
N
11
5.72
0.70
108.50
114.22
B
B
B
O4'
C1'
N9
G
G
G
5
5
5
N
11
4.41
0.70
108.50
112.91
B
B
B
O4'
C1'
N9
A
A
A
7
7
7
N
11
4.39
0.70
108.50
112.89
B
B
B
O4'
C1'
N9
G
G
G
9
9
9
N
12
4.26
0.70
108.50
112.76
B
B
B
O4'
C1'
N9
G
G
G
1
1
1
N
12
-4.30
0.70
109.70
105.40
B
B
B
C1'
O4'
C4'
G
G
G
3
3
3
N
12
4.79
0.70
108.50
113.29
B
B
B
O4'
C1'
N9
A
A
A
6
6
6
N
13
4.98
0.70
108.50
113.48
B
B
B
O4'
C1'
N9
G
G
G
5
5
5
N
14
5.12
0.70
108.50
113.62
B
B
B
O4'
C1'
N9
G
G
G
5
5
5
N
15
-4.54
0.70
109.70
105.16
B
B
B
C1'
O4'
C4'
G
G
G
5
5
5
N
15
4.88
0.70
108.50
113.38
B
B
B
O4'
C1'
N9
A
A
A
6
6
6
N
16
-5.28
0.70
109.70
104.42
B
B
B
C1'
O4'
C4'
G
G
G
3
3
3
N
16
-4.91
0.70
109.70
104.79
B
B
B
C1'
O4'
C4'
G
G
G
5
5
5
N
16
4.59
0.70
108.50
113.09
B
B
B
O4'
C1'
N9
G
G
G
5
5
5
N
17
-5.13
0.70
109.70
104.57
B
B
B
C1'
O4'
C4'
G
G
G
3
3
3
N
17
4.36
0.70
108.50
112.86
B
B
B
O4'
C1'
N9
G
G
G
3
3
3
N
17
-4.95
0.70
109.70
104.75
B
B
B
C1'
O4'
C4'
G
G
G
5
5
5
N
17
4.20
0.70
108.50
112.70
B
B
B
O4'
C1'
N9
A
A
A
10
10
10
N
18
-5.22
0.70
109.70
104.48
B
B
B
C1'
O4'
C4'
G
G
G
3
3
3
N
18
5.04
0.70
108.50
113.54
B
B
B
O4'
C1'
N9
G
G
G
3
3
3
N
18
4.90
0.70
108.50
113.40
B
B
B
O4'
C1'
N9
G
G
G
9
9
9
N
19
-4.54
0.70
109.70
105.16
B
B
B
C1'
O4'
C4'
G
G
G
5
5
5
N
19
4.47
0.70
108.50
112.97
B
B
B
O4'
C1'
N9
G
G
G
9
9
9
N
19
-9.02
1.40
115.20
106.18
B
B
B
C5'
C4'
C3'
A
A
A
10
10
10
N
1
A
TRP
113
59.04
14.14
1
A
VAL
130
43.22
91.10
1
A
ASP
138
-67.20
-179.67
1
A
HIS
143
-144.89
28.15
1
A
ASP
169
55.87
13.14
1
A
SER
183
-142.65
49.74
1
A
ASP
185
-149.38
-47.82
1
A
ALA
228
-69.64
17.50
1
A
LEU
248
-69.57
-179.59
1
A
LYS
251
56.49
7.57
1
A
ASN
265
53.77
-169.03
1
A
ASN
267
-67.16
-179.81
2
A
PRO
112
-67.51
13.80
2
A
TRP
113
58.00
14.25
2
A
VAL
130
44.39
91.14
2
A
HIS
143
-148.62
31.31
2
A
ASP
169
56.20
13.16
2
A
PRO
178
-65.24
-177.65
2
A
SER
183
-147.58
53.41
2
A
ASP
185
-150.79
-48.13
2
A
SER
190
177.36
-178.08
2
A
ALA
228
-69.90
16.51
2
A
ALA
230
-177.06
-178.00
2
A
ASP
247
49.73
95.47
2
A
LYS
251
55.13
6.17
2
A
SER
254
-69.41
81.14
2
A
ASN
265
57.90
174.30
3
A
TRP
113
59.81
14.31
3
A
VAL
130
44.30
92.18
3
A
HIS
143
-149.15
23.53
3
A
THR
157
-68.45
0.17
3
A
ASP
169
55.05
14.30
3
A
ASP
185
-146.82
-49.87
3
A
GLU
186
-174.82
145.30
3
A
ALA
228
-67.63
12.30
3
A
ALA
230
-171.94
-176.05
3
A
ASP
247
62.77
129.29
3
A
LYS
251
55.07
6.48
3
A
LYS
263
-52.86
-9.97
3
A
ARG
268
-146.66
30.00
4
A
TRP
113
57.46
15.29
4
A
VAL
130
45.31
92.25
4
A
HIS
143
-148.29
26.29
4
A
ASP
169
55.79
14.06
4
A
SER
183
-148.78
52.48
4
A
ASP
185
-146.78
-51.63
4
A
SER
190
175.52
176.57
4
A
ALA
228
-74.00
25.14
4
A
ALA
230
-176.94
-179.08
4
A
LEU
248
-67.63
-176.04
4
A
LYS
251
55.14
9.93
4
A
LYS
263
-49.99
-18.16
4
A
ASN
265
53.68
-162.49
4
A
ASN
267
46.84
-158.87
4
A
ARG
268
-141.20
20.16
5
A
VAL
130
45.08
90.89
5
A
HIS
143
-144.54
-2.27
5
A
THR
157
-69.25
0.39
5
A
ASP
169
56.88
15.93
5
A
SER
183
-144.66
35.40
5
A
ASP
185
-146.65
-49.80
5
A
GLU
186
-174.48
144.78
5
A
ARG
197
58.84
17.00
5
A
ALA
230
-178.24
-177.34
5
A
ASP
247
46.66
75.76
5
A
LYS
251
54.96
8.47
5
A
LYS
263
-53.26
-9.29
5
A
HIS
264
-148.93
10.27
5
A
ASN
267
-157.00
-31.24
6
A
HIS
98
-151.31
-10.53
6
A
VAL
130
42.88
89.35
6
A
SER
144
121.23
138.88
6
A
ASP
169
55.64
12.19
6
A
SER
183
-146.62
48.66
6
A
ASP
185
-144.81
-53.27
6
A
PRO
225
-66.79
-179.22
6
A
ASP
247
40.40
71.50
6
A
LEU
248
-65.61
-176.60
6
A
LYS
251
54.45
8.72
6
A
HIS
264
-162.71
-27.14
6
A
SER
266
-167.86
-165.62
6
A
ASN
267
47.60
174.93
6
A
ARG
268
-145.67
16.10
7
A
TRP
113
59.62
15.91
7
A
VAL
130
45.65
90.10
7
A
LYS
137
-167.03
-168.89
7
A
HIS
143
-148.44
26.17
7
A
ASP
169
55.99
12.15
7
A
SER
183
-147.47
48.99
7
A
ASP
185
-136.50
-45.70
7
A
ARG
197
56.10
19.75
7
A
ALA
228
-69.79
10.40
7
A
ASP
247
38.13
74.34
7
A
LYS
251
55.76
7.46
7
A
HIS
264
49.08
15.67
8
A
VAL
130
44.31
91.46
8
A
SER
144
122.42
126.97
8
A
ASP
169
56.57
10.04
8
A
SER
183
-149.91
49.42
8
A
ASP
185
-146.13
-50.84
8
A
SER
190
133.27
165.20
8
A
ALA
230
-170.87
-176.82
8
A
ASP
247
41.98
70.12
8
A
LYS
251
54.29
10.15
8
A
HIS
264
-160.81
16.02
8
A
ASN
265
-143.23
-2.07
8
A
SER
266
54.39
169.30
8
A
ARG
268
-147.25
10.47
9
A
HIS
98
53.59
-171.71
9
A
TRP
113
59.71
13.97
9
A
VAL
130
45.11
90.99
9
A
HIS
143
-146.34
-6.79
9
A
ASP
169
55.19
13.45
9
A
SER
183
-144.62
45.12
9
A
ASP
185
-144.54
-52.76
9
A
ARG
197
58.83
18.53
9
A
ALA
228
-68.89
14.76
9
A
ASP
247
49.75
106.29
9
A
LYS
251
56.59
6.22
10
A
VAL
108
-119.87
79.08
10
A
VAL
130
43.99
91.94
10
A
HIS
143
-149.74
17.46
10
A
ASP
169
56.06
13.58
10
A
SER
183
-145.10
49.96
10
A
ASP
185
-145.62
-54.22
10
A
ALA
228
-69.17
17.37
10
A
ASP
247
37.92
79.40
10
A
LEU
248
-68.58
-175.03
10
A
LYS
251
54.65
10.96
11
A
PRO
112
-75.84
-167.77
11
A
VAL
130
44.51
90.14
11
A
SER
144
125.98
124.25
11
A
ASP
169
56.27
10.79
11
A
SER
183
-146.82
51.56
11
A
ASP
185
-146.04
-51.65
11
A
ARG
197
57.45
19.64
11
A
ALA
228
-68.30
18.37
11
A
ALA
230
-175.72
-177.04
11
A
ASP
247
59.16
155.71
11
A
LYS
251
55.63
9.85
11
A
HIS
264
-165.61
22.93
12
A
VAL
130
43.76
91.07
12
A
SER
144
122.94
139.30
12
A
ASP
169
55.56
13.89
12
A
SER
183
-140.42
44.53
12
A
ASP
185
-147.59
-47.49
12
A
ALA
228
-66.07
5.66
12
A
ASP
247
45.16
71.30
12
A
LEU
248
-66.41
-177.36
12
A
LYS
251
55.18
8.29
12
A
HIS
264
-155.68
11.08
13
A
SER
97
-143.47
13.30
13
A
VAL
130
44.11
92.01
13
A
HIS
143
-144.93
20.80
13
A
ASP
169
56.88
14.44
13
A
SER
183
-146.98
50.57
13
A
ASP
185
-146.57
-54.10
13
A
SER
190
179.77
-179.20
13
A
ASP
247
39.99
69.67
13
A
LEU
248
-69.03
-174.80
13
A
LYS
251
54.88
11.93
13
A
HIS
264
-157.89
-17.42
13
A
ASN
265
-69.27
-179.60
14
A
TRP
113
59.04
14.18
14
A
VAL
130
44.44
89.97
14
A
LYS
137
-160.39
-166.26
14
A
HIS
143
-145.55
22.59
14
A
ASP
169
56.31
12.84
14
A
SER
183
-142.96
46.94
14
A
ASP
185
-146.77
-50.65
14
A
ALA
230
-170.66
-177.53
14
A
ASP
247
38.41
70.34
14
A
LYS
251
55.20
7.60
14
A
HIS
264
-152.99
17.46
14
A
ASN
267
51.14
-165.63
14
A
ARG
268
-144.53
25.70
15
A
SER
97
-149.32
10.52
15
A
TRP
113
58.03
15.38
15
A
VAL
130
46.06
91.92
15
A
HIS
143
-145.18
27.65
15
A
ASP
169
54.74
15.59
15
A
SER
180
-141.19
27.29
15
A
ASP
185
-144.17
-52.82
15
A
SER
190
-175.57
-179.79
15
A
ALA
228
-68.83
10.90
15
A
LYS
251
55.01
6.90
16
A
SER
97
-143.65
15.31
16
A
TRP
113
59.98
14.32
16
A
VAL
130
46.01
94.01
16
A
SER
144
125.05
146.55
16
A
THR
157
-69.05
0.24
16
A
ASP
169
55.90
14.14
16
A
SER
183
-146.94
52.37
16
A
ASP
185
-145.35
-55.68
16
A
SER
190
156.65
167.54
16
A
ALA
228
-71.66
21.83
16
A
LEU
248
-69.65
-177.18
16
A
LYS
251
55.89
11.06
17
A
HIS
98
52.90
-170.98
17
A
VAL
130
46.05
93.93
17
A
SER
144
122.06
142.76
17
A
THR
157
-69.82
0.86
17
A
ASP
169
55.93
13.29
17
A
SER
180
-140.89
20.55
17
A
SER
183
-145.49
54.52
17
A
ASP
185
-149.37
-47.95
17
A
SER
190
176.76
168.14
17
A
ALA
228
-70.74
21.74
17
A
LYS
251
55.91
8.51
17
A
ASN
265
58.42
6.26
17
A
SER
266
38.91
32.32
17
A
ASN
267
57.94
6.67
17
A
ARG
268
39.18
40.21
18
A
TRP
113
57.90
15.23
18
A
THR
116
-76.72
-169.60
18
A
VAL
130
45.57
90.19
18
A
HIS
143
-147.41
26.22
18
A
ASP
169
58.04
15.99
18
A
SER
180
-140.38
16.01
18
A
SER
183
-144.25
46.42
18
A
ASP
185
-139.12
-41.62
18
A
SER
190
178.65
176.05
18
A
ARG
197
58.40
18.49
18
A
ALA
228
-68.60
14.32
18
A
ALA
230
178.64
-179.13
18
A
LEU
248
-66.88
-177.87
18
A
LYS
251
55.03
11.14
18
A
PRO
262
-48.20
150.43
18
A
HIS
264
-153.34
17.66
18
A
ASN
267
52.36
-177.13
18
A
ARG
268
-145.93
10.15
19
A
TRP
113
59.97
13.99
19
A
VAL
130
44.21
92.63
19
A
HIS
143
-145.20
22.88
19
A
ASP
169
56.21
12.79
19
A
SER
183
-145.08
51.80
19
A
ASP
185
-145.73
-56.11
19
A
SER
190
140.28
175.91
19
A
ALA
228
-70.78
20.18
19
A
ALA
230
-171.71
-178.14
19
A
LEU
248
-67.23
-179.05
19
A
LYS
251
54.85
10.06
19
A
ASN
265
55.20
-166.04
19
A
ARG
268
-140.02
17.31
20
A
HIS
98
58.30
11.78
20
A
TRP
113
58.38
14.73
20
A
VAL
130
44.98
91.90
20
A
HIS
143
-147.72
30.23
20
A
THR
157
-68.82
0.44
20
A
ASP
169
56.09
13.32
20
A
SER
183
-144.04
47.83
20
A
ASP
185
-142.71
-61.13
20
A
ALA
228
-68.78
13.55
20
A
ALA
230
-171.66
-177.46
20
A
LEU
248
-65.67
-179.28
20
A
LYS
251
55.40
10.32
20
A
LYS
263
-33.92
101.89
20
A
HIS
264
45.98
28.35
20
A
ASN
265
-153.10
30.30
20
A
ASN
267
46.57
-175.63
20
A
ARG
268
-149.56
16.82
NMR structure of human TDP-43 tandem RRMs in complex with UG-rich RNA
1
N
N
2
N
N
A
GLU
117
A
GLU
22
HELX_P
A
SER
125
A
SER
30
1
1
9
A
TYR
155
A
TYR
60
HELX_P
A
VAL
159
A
VAL
64
5
2
5
A
LYS
160
A
LYS
65
HELX_P
A
GLN
164
A
GLN
69
5
3
5
A
THR
203
A
THR
108
HELX_P
A
SER
212
A
SER
117
1
4
10
A
GLN
238
A
GLN
143
HELX_P
A
SER
242
A
SER
147
5
5
5
TRANSCRIPTION
TRANSCRIPTION, HNRNP, CYSTIC FIBROSIS, NEURODEGENERATION, ISOTOPE-LABELLED RNA, HAMMERHEAD RIBOZYME
A
LYS
224
A
LYS
129
1
A
PRO
225
A
PRO
130
-3.70
A
LYS
224
A
LYS
129
2
A
PRO
225
A
PRO
130
-3.76
A
LYS
224
A
LYS
129
3
A
PRO
225
A
PRO
130
-4.73
A
LYS
224
A
LYS
129
4
A
PRO
225
A
PRO
130
-5.83
A
LYS
224
A
LYS
129
5
A
PRO
225
A
PRO
130
-4.24
A
LYS
224
A
LYS
129
6
A
PRO
225
A
PRO
130
-5.02
A
LYS
224
A
LYS
129
7
A
PRO
225
A
PRO
130
-5.23
A
LYS
224
A
LYS
129
8
A
PRO
225
A
PRO
130
-2.57
A
LYS
224
A
LYS
129
9
A
PRO
225
A
PRO
130
-4.40
A
LYS
224
A
LYS
129
10
A
PRO
225
A
PRO
130
-3.42
A
LYS
224
A
LYS
129
11
A
PRO
225
A
PRO
130
-5.01
A
LYS
224
A
LYS
129
12
A
PRO
225
A
PRO
130
-5.79
A
LYS
224
A
LYS
129
13
A
PRO
225
A
PRO
130
-4.64
A
LYS
224
A
LYS
129
14
A
PRO
225
A
PRO
130
-4.48
A
LYS
224
A
LYS
129
15
A
PRO
225
A
PRO
130
-4.24
A
LYS
224
A
LYS
129
16
A
PRO
225
A
PRO
130
-2.93
A
LYS
224
A
LYS
129
17
A
PRO
225
A
PRO
130
-4.10
A
LYS
224
A
LYS
129
18
A
PRO
225
A
PRO
130
-3.77
A
LYS
224
A
LYS
129
19
A
PRO
225
A
PRO
130
-6.51
A
LYS
224
A
LYS
129
20
A
PRO
225
A
PRO
130
-4.57
TADBP_HUMAN
UNP
1
Q13148
4BS2
PDB
2
4BS2
102
269
4BS2
102
269
Q13148
A
1
7
174
1
12
4BS2
1
12
4BS2
B
2
1
12
1
expression tag
GLY
96
4BS2
A
Q13148
UNP
1
1
expression tag
SER
97
4BS2
A
Q13148
UNP
2
1
expression tag
HIS
98
4BS2
A
Q13148
UNP
3
1
expression tag
MET
99
4BS2
A
Q13148
UNP
4
1
expression tag
ALA
100
4BS2
A
Q13148
UNP
5
1
expression tag
SER
101
4BS2
A
Q13148
UNP
6
5
5
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
MET
132
A
MET
37
A
LYS
136
A
LYS
41
A
PHE
147
A
PHE
52
A
ARG
151
A
ARG
56
A
LEU
106
A
LEU
11
A
LEU
109
A
LEU
14
A
ARG
171
A
ARG
76
A
LYS
176
A
LYS
81
A
HIS
166
A
HIS
71
A
ILE
168
A
ILE
73
A
VAL
217
A
VAL
122
A
PHE
221
A
PHE
126
A
PHE
229
A
PHE
134
A
PHE
234
A
PHE
139
A
LYS
192
A
LYS
97
A
GLY
196
A
GLY
101
A
ILE
253
A
ILE
158
A
SER
258
A
SER
163
A
LEU
248
A
LEU
153
A
ILE
250
A
ILE
155
1
P 1