0.008988
0.000000
0.000000
0.000000
0.008988
0.000000
0.000000
0.000000
0.008643
0.00000
0.00000
0.00000
Schneider, A.M.
Weichenrieder, O.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
24
90.00
90.00
90.00
111.260
111.260
115.700
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
Nucleic Acids Res.
NARHAD
0389
0305-1048
41
10563
10.1093/NAR/GKT786
24003030
Structure and Properties of the Esterase from Non-Ltr Retrotransposons Suggest a Role for Lipids in Retrotransposition.
2013
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
DYNAMICALLY BENDABLE MIRRORS
PIXEL
2011-09-09
DECTRIS PILATUS 6M
SI(111)
SINGLE WAVELENGTH
M
x-ray
1
1.0000
1.0
1.0397
1.0
X10SA
SLS
1.0, 1.0397
SYNCHROTRON
SLS BEAMLINE X10SA
19141.092
ORF1-ENCODED PROTEIN
3.1.-.-
SGNH ESTERASE DOMAIN, RESIDUES 136-302
3
man
polymer
18.015
water
74
nat
water
ZFL2-1 ORF1P
no
no
GPAMDVAIIGDSIVRHVRAASSKGNKVRTFCFPGARVKNISTQIPTILGAAESPGAVVLHVGTNDTGLRQSEILKKDFRS
LIETVRRTSPATQIIVSGPLPTYRRGNERFSRLLALNEWLITWCKEQKLLFANNWNLFWERPRLFRPDGLHPSRAGAELL
SDNISRLLRTI
GPAMDVAIIGDSIVRHVRAASSKGNKVRTFCFPGARVKNISTQIPTILGAAESPGAVVLHVGTNDTGLRQSEILKKDFRS
LIETVRRTSPATQIIVSGPLPTYRRGNERFSRLLALNEWLITWCKEQKLLFANNWNLFWERPRLFRPDGLHPSRAGAELL
SDNISRLLRTI
A,B,C
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
ZEBRAFISH
sample
SYNTHETIC CODON-OPTIMIZED DNA SEQUENCE
7955
DANIO RERIO
469008
ESCHERICHIA COLI
BL21(DE3)
STAR
PETM41P
1
3.2
62
GOLD SITES WERE IDENTIFIED BY SIRAS, USING THE SECOND DATASET, COLLECTED AT 1.0397 A, PEAK DATA AT THE AU LIII-EDGE.
7.0
100 MM NA-HEPES PH=7.0, 0.5% JEFFAMINE, 1.1M NA-MALONATE.
diffrn
diffrn_source
repository
Initial release
Database references
Data collection
1
0
2013-09-11
1
1
2013-12-25
1
2
2017-10-18
COILED COIL DOMAIN OF THE ZFL2-1 ORF1 PROTEIN FROM THE ZEBRAFISH ZFL2-1 RETROTRANSPOSON
PDBE
Y
PDBE
2013-08-11
REL
HOH
water
THE FOUR N-TERMINAL RESIDUES REMAIN FROM THE EXPRESSION
TAG.
HOH
2001
2
HOH
HOH
2001
A
HOH
2002
2
HOH
HOH
2002
A
HOH
2003
2
HOH
HOH
2003
A
HOH
2004
2
HOH
HOH
2004
A
HOH
2005
2
HOH
HOH
2005
A
HOH
2006
2
HOH
HOH
2006
A
HOH
2007
2
HOH
HOH
2007
A
HOH
2008
2
HOH
HOH
2008
A
HOH
2009
2
HOH
HOH
2009
A
HOH
2010
2
HOH
HOH
2010
A
HOH
2011
2
HOH
HOH
2011
A
HOH
2012
2
HOH
HOH
2012
A
HOH
2013
2
HOH
HOH
2013
A
HOH
2014
2
HOH
HOH
2014
A
HOH
2015
2
HOH
HOH
2015
A
HOH
2016
2
HOH
HOH
2016
A
HOH
2017
2
HOH
HOH
2017
A
HOH
2018
2
HOH
HOH
2018
A
HOH
2019
2
HOH
HOH
2019
A
HOH
2020
2
HOH
HOH
2020
A
HOH
2021
2
HOH
HOH
2021
A
HOH
2022
2
HOH
HOH
2022
A
HOH
2023
2
HOH
HOH
2023
A
HOH
2024
2
HOH
HOH
2024
A
HOH
2025
2
HOH
HOH
2025
A
HOH
2026
2
HOH
HOH
2026
A
HOH
2027
2
HOH
HOH
2027
A
HOH
2028
2
HOH
HOH
2028
A
HOH
2029
2
HOH
HOH
2029
A
HOH
2030
2
HOH
HOH
2030
A
HOH
2031
2
HOH
HOH
2031
A
HOH
2032
2
HOH
HOH
2032
A
HOH
2033
2
HOH
HOH
2033
A
HOH
2034
2
HOH
HOH
2034
A
HOH
2035
2
HOH
HOH
2035
A
HOH
2036
2
HOH
HOH
2036
A
HOH
2037
2
HOH
HOH
2037
A
HOH
2038
2
HOH
HOH
2038
A
HOH
2001
2
HOH
HOH
2001
B
HOH
2002
2
HOH
HOH
2002
B
HOH
2003
2
HOH
HOH
2003
B
HOH
2004
2
HOH
HOH
2004
B
HOH
2005
2
HOH
HOH
2005
B
HOH
2006
2
HOH
HOH
2006
B
HOH
2007
2
HOH
HOH
2007
B
HOH
2008
2
HOH
HOH
2008
B
HOH
2009
2
HOH
HOH
2009
B
HOH
2010
2
HOH
HOH
2010
B
HOH
2011
2
HOH
HOH
2011
B
HOH
2012
2
HOH
HOH
2012
B
HOH
2013
2
HOH
HOH
2013
B
HOH
2014
2
HOH
HOH
2014
B
HOH
2015
2
HOH
HOH
2015
B
HOH
2016
2
HOH
HOH
2016
B
HOH
2017
2
HOH
HOH
2017
B
HOH
2018
2
HOH
HOH
2018
B
HOH
2019
2
HOH
HOH
2019
B
HOH
2020
2
HOH
HOH
2020
B
HOH
2021
2
HOH
HOH
2021
B
HOH
2022
2
HOH
HOH
2022
B
HOH
2023
2
HOH
HOH
2023
B
HOH
2024
2
HOH
HOH
2024
B
HOH
2025
2
HOH
HOH
2025
B
HOH
2001
2
HOH
HOH
2001
C
HOH
2002
2
HOH
HOH
2002
C
HOH
2003
2
HOH
HOH
2003
C
HOH
2004
2
HOH
HOH
2004
C
HOH
2005
2
HOH
HOH
2005
C
HOH
2006
2
HOH
HOH
2006
C
HOH
2007
2
HOH
HOH
2007
C
HOH
2008
2
HOH
HOH
2008
C
HOH
2009
2
HOH
HOH
2009
C
HOH
2010
2
HOH
HOH
2010
C
HOH
2011
2
HOH
HOH
2011
C
GLY
132
n
1
GLY
132
A
PRO
133
n
2
PRO
133
A
ALA
134
n
3
ALA
134
A
MET
135
n
4
MET
135
A
ASP
136
n
5
ASP
136
A
VAL
137
n
6
VAL
137
A
ALA
138
n
7
ALA
138
A
ILE
139
n
8
ILE
139
A
ILE
140
n
9
ILE
140
A
GLY
141
n
10
GLY
141
A
ASP
142
n
11
ASP
142
A
SER
143
n
12
SER
143
A
ILE
144
n
13
ILE
144
A
VAL
145
n
14
VAL
145
A
ARG
146
n
15
ARG
146
A
HIS
147
n
16
HIS
147
A
VAL
148
n
17
VAL
148
A
ARG
149
n
18
ARG
149
A
ALA
150
n
19
ALA
150
A
ALA
151
n
20
ALA
151
A
SER
152
n
21
SER
152
A
SER
153
n
22
SER
153
A
LYS
154
n
23
LYS
154
A
GLY
155
n
24
GLY
155
A
ASN
156
n
25
ASN
156
A
LYS
157
n
26
LYS
157
A
VAL
158
n
27
VAL
158
A
ARG
159
n
28
ARG
159
A
THR
160
n
29
THR
160
A
PHE
161
n
30
PHE
161
A
CYS
162
n
31
CYS
162
A
PHE
163
n
32
PHE
163
A
PRO
164
n
33
PRO
164
A
GLY
165
n
34
GLY
165
A
ALA
166
n
35
ALA
166
A
ARG
167
n
36
ARG
167
A
VAL
168
n
37
VAL
168
A
LYS
169
n
38
LYS
169
A
ASN
170
n
39
ASN
170
A
ILE
171
n
40
ILE
171
A
SER
172
n
41
SER
172
A
THR
173
n
42
THR
173
A
GLN
174
n
43
GLN
174
A
ILE
175
n
44
ILE
175
A
PRO
176
n
45
PRO
176
A
THR
177
n
46
THR
177
A
ILE
178
n
47
ILE
178
A
LEU
179
n
48
LEU
179
A
GLY
180
n
49
GLY
180
A
ALA
181
n
50
ALA
181
A
ALA
182
n
51
ALA
182
A
GLU
183
n
52
GLU
183
A
SER
184
n
53
SER
184
A
PRO
185
n
54
PRO
185
A
GLY
186
n
55
GLY
186
A
ALA
187
n
56
ALA
187
A
VAL
188
n
57
VAL
188
A
VAL
189
n
58
VAL
189
A
LEU
190
n
59
LEU
190
A
HIS
191
n
60
HIS
191
A
VAL
192
n
61
VAL
192
A
GLY
193
n
62
GLY
193
A
THR
194
n
63
THR
194
A
ASN
195
n
64
ASN
195
A
ASP
196
n
65
ASP
196
A
THR
197
n
66
THR
197
A
GLY
198
n
67
GLY
198
A
LEU
199
n
68
LEU
199
A
ARG
200
n
69
ARG
200
A
GLN
201
n
70
GLN
201
A
SER
202
n
71
SER
202
A
GLU
203
n
72
GLU
203
A
ILE
204
n
73
ILE
204
A
LEU
205
n
74
LEU
205
A
LYS
206
n
75
LYS
206
A
LYS
207
n
76
LYS
207
A
ASP
208
n
77
ASP
208
A
PHE
209
n
78
PHE
209
A
ARG
210
n
79
ARG
210
A
SER
211
n
80
SER
211
A
LEU
212
n
81
LEU
212
A
ILE
213
n
82
ILE
213
A
GLU
214
n
83
GLU
214
A
THR
215
n
84
THR
215
A
VAL
216
n
85
VAL
216
A
ARG
217
n
86
ARG
217
A
ARG
218
n
87
ARG
218
A
THR
219
n
88
THR
219
A
SER
220
n
89
SER
220
A
PRO
221
n
90
PRO
221
A
ALA
222
n
91
ALA
222
A
THR
223
n
92
THR
223
A
GLN
224
n
93
GLN
224
A
ILE
225
n
94
ILE
225
A
ILE
226
n
95
ILE
226
A
VAL
227
n
96
VAL
227
A
SER
228
n
97
SER
228
A
GLY
229
n
98
GLY
229
A
PRO
230
n
99
PRO
230
A
LEU
231
n
100
LEU
231
A
PRO
232
n
101
PRO
232
A
THR
233
n
102
THR
233
A
TYR
234
n
103
TYR
234
A
ARG
235
n
104
ARG
235
A
ARG
236
n
105
ARG
236
A
GLY
237
n
106
GLY
237
A
ASN
238
n
107
ASN
238
A
GLU
239
n
108
GLU
239
A
ARG
240
n
109
ARG
240
A
PHE
241
n
110
PHE
241
A
SER
242
n
111
SER
242
A
ARG
243
n
112
ARG
243
A
LEU
244
n
113
LEU
244
A
LEU
245
n
114
LEU
245
A
ALA
246
n
115
ALA
246
A
LEU
247
n
116
LEU
247
A
ASN
248
n
117
ASN
248
A
GLU
249
n
118
GLU
249
A
TRP
250
n
119
TRP
250
A
LEU
251
n
120
LEU
251
A
ILE
252
n
121
ILE
252
A
THR
253
n
122
THR
253
A
TRP
254
n
123
TRP
254
A
CYS
255
n
124
CYS
255
A
LYS
256
n
125
LYS
256
A
GLU
257
n
126
GLU
257
A
GLN
258
n
127
GLN
258
A
LYS
259
n
128
LYS
259
A
LEU
260
n
129
LEU
260
A
LEU
261
n
130
LEU
261
A
PHE
262
n
131
PHE
262
A
ALA
263
n
132
ALA
263
A
ASN
264
n
133
ASN
264
A
ASN
265
n
134
ASN
265
A
TRP
266
n
135
TRP
266
A
ASN
267
n
136
ASN
267
A
LEU
268
n
137
LEU
268
A
PHE
269
n
138
PHE
269
A
TRP
270
n
139
TRP
270
A
GLU
271
n
140
GLU
271
A
ARG
272
n
141
ARG
272
A
PRO
273
n
142
PRO
273
A
ARG
274
n
143
ARG
274
A
LEU
275
n
144
LEU
275
A
PHE
276
n
145
PHE
276
A
ARG
277
n
146
ARG
277
A
PRO
278
n
147
PRO
278
A
ASP
279
n
148
ASP
279
A
GLY
280
n
149
GLY
280
A
LEU
281
n
150
LEU
281
A
HIS
282
n
151
HIS
282
A
PRO
283
n
152
PRO
283
A
SER
284
n
153
SER
284
A
ARG
285
n
154
ARG
285
A
ALA
286
n
155
ALA
286
A
GLY
287
n
156
GLY
287
A
ALA
288
n
157
ALA
288
A
GLU
289
n
158
GLU
289
A
LEU
290
n
159
LEU
290
A
LEU
291
n
160
LEU
291
A
SER
292
n
161
SER
292
A
ASP
293
n
162
ASP
293
A
ASN
294
n
163
ASN
294
A
ILE
295
n
164
ILE
295
A
SER
296
n
165
SER
296
A
ARG
297
n
166
ARG
297
A
LEU
298
n
167
LEU
298
A
LEU
299
n
168
LEU
299
A
ARG
300
n
169
ARG
300
A
THR
301
n
170
THR
301
A
ILE
302
n
171
ILE
302
A
n
1
132
B
n
2
133
B
n
3
134
B
MET
135
n
4
MET
135
B
ASP
136
n
5
ASP
136
B
VAL
137
n
6
VAL
137
B
ALA
138
n
7
ALA
138
B
ILE
139
n
8
ILE
139
B
ILE
140
n
9
ILE
140
B
GLY
141
n
10
GLY
141
B
ASP
142
n
11
ASP
142
B
SER
143
n
12
SER
143
B
ILE
144
n
13
ILE
144
B
VAL
145
n
14
VAL
145
B
ARG
146
n
15
ARG
146
B
HIS
147
n
16
HIS
147
B
VAL
148
n
17
VAL
148
B
ARG
149
n
18
ARG
149
B
ALA
150
n
19
ALA
150
B
ALA
151
n
20
ALA
151
B
SER
152
n
21
SER
152
B
SER
153
n
22
SER
153
B
LYS
154
n
23
LYS
154
B
GLY
155
n
24
GLY
155
B
ASN
156
n
25
ASN
156
B
LYS
157
n
26
LYS
157
B
VAL
158
n
27
VAL
158
B
ARG
159
n
28
ARG
159
B
THR
160
n
29
THR
160
B
PHE
161
n
30
PHE
161
B
CYS
162
n
31
CYS
162
B
PHE
163
n
32
PHE
163
B
PRO
164
n
33
PRO
164
B
GLY
165
n
34
GLY
165
B
ALA
166
n
35
ALA
166
B
ARG
167
n
36
ARG
167
B
VAL
168
n
37
VAL
168
B
LYS
169
n
38
LYS
169
B
ASN
170
n
39
ASN
170
B
ILE
171
n
40
ILE
171
B
SER
172
n
41
SER
172
B
THR
173
n
42
THR
173
B
GLN
174
n
43
GLN
174
B
ILE
175
n
44
ILE
175
B
PRO
176
n
45
PRO
176
B
THR
177
n
46
THR
177
B
ILE
178
n
47
ILE
178
B
LEU
179
n
48
LEU
179
B
GLY
180
n
49
GLY
180
B
ALA
181
n
50
ALA
181
B
ALA
182
n
51
ALA
182
B
GLU
183
n
52
GLU
183
B
SER
184
n
53
SER
184
B
PRO
185
n
54
PRO
185
B
GLY
186
n
55
GLY
186
B
ALA
187
n
56
ALA
187
B
VAL
188
n
57
VAL
188
B
VAL
189
n
58
VAL
189
B
LEU
190
n
59
LEU
190
B
HIS
191
n
60
HIS
191
B
VAL
192
n
61
VAL
192
B
GLY
193
n
62
GLY
193
B
THR
194
n
63
THR
194
B
ASN
195
n
64
ASN
195
B
ASP
196
n
65
ASP
196
B
THR
197
n
66
THR
197
B
GLY
198
n
67
GLY
198
B
LEU
199
n
68
LEU
199
B
ARG
200
n
69
ARG
200
B
GLN
201
n
70
GLN
201
B
SER
202
n
71
SER
202
B
GLU
203
n
72
GLU
203
B
ILE
204
n
73
ILE
204
B
LEU
205
n
74
LEU
205
B
LYS
206
n
75
LYS
206
B
LYS
207
n
76
LYS
207
B
ASP
208
n
77
ASP
208
B
PHE
209
n
78
PHE
209
B
ARG
210
n
79
ARG
210
B
SER
211
n
80
SER
211
B
LEU
212
n
81
LEU
212
B
ILE
213
n
82
ILE
213
B
GLU
214
n
83
GLU
214
B
THR
215
n
84
THR
215
B
VAL
216
n
85
VAL
216
B
ARG
217
n
86
ARG
217
B
ARG
218
n
87
ARG
218
B
THR
219
n
88
THR
219
B
SER
220
n
89
SER
220
B
PRO
221
n
90
PRO
221
B
ALA
222
n
91
ALA
222
B
THR
223
n
92
THR
223
B
GLN
224
n
93
GLN
224
B
ILE
225
n
94
ILE
225
B
ILE
226
n
95
ILE
226
B
VAL
227
n
96
VAL
227
B
SER
228
n
97
SER
228
B
GLY
229
n
98
GLY
229
B
PRO
230
n
99
PRO
230
B
LEU
231
n
100
LEU
231
B
PRO
232
n
101
PRO
232
B
THR
233
n
102
THR
233
B
TYR
234
n
103
TYR
234
B
ARG
235
n
104
ARG
235
B
ARG
236
n
105
ARG
236
B
GLY
237
n
106
GLY
237
B
ASN
238
n
107
ASN
238
B
GLU
239
n
108
GLU
239
B
ARG
240
n
109
ARG
240
B
PHE
241
n
110
PHE
241
B
SER
242
n
111
SER
242
B
ARG
243
n
112
ARG
243
B
LEU
244
n
113
LEU
244
B
LEU
245
n
114
LEU
245
B
ALA
246
n
115
ALA
246
B
LEU
247
n
116
LEU
247
B
ASN
248
n
117
ASN
248
B
GLU
249
n
118
GLU
249
B
TRP
250
n
119
TRP
250
B
LEU
251
n
120
LEU
251
B
ILE
252
n
121
ILE
252
B
THR
253
n
122
THR
253
B
TRP
254
n
123
TRP
254
B
CYS
255
n
124
CYS
255
B
LYS
256
n
125
LYS
256
B
GLU
257
n
126
GLU
257
B
GLN
258
n
127
GLN
258
B
LYS
259
n
128
LYS
259
B
LEU
260
n
129
LEU
260
B
LEU
261
n
130
LEU
261
B
PHE
262
n
131
PHE
262
B
ALA
263
n
132
ALA
263
B
ASN
264
n
133
ASN
264
B
ASN
265
n
134
ASN
265
B
TRP
266
n
135
TRP
266
B
ASN
267
n
136
ASN
267
B
LEU
268
n
137
LEU
268
B
PHE
269
n
138
PHE
269
B
TRP
270
n
139
TRP
270
B
GLU
271
n
140
GLU
271
B
ARG
272
n
141
ARG
272
B
PRO
273
n
142
PRO
273
B
ARG
274
n
143
ARG
274
B
LEU
275
n
144
LEU
275
B
PHE
276
n
145
PHE
276
B
ARG
277
n
146
ARG
277
B
PRO
278
n
147
PRO
278
B
ASP
279
n
148
ASP
279
B
GLY
280
n
149
GLY
280
B
LEU
281
n
150
LEU
281
B
HIS
282
n
151
HIS
282
B
PRO
283
n
152
PRO
283
B
SER
284
n
153
SER
284
B
ARG
285
n
154
ARG
285
B
ALA
286
n
155
ALA
286
B
GLY
287
n
156
GLY
287
B
ALA
288
n
157
ALA
288
B
GLU
289
n
158
GLU
289
B
LEU
290
n
159
LEU
290
B
LEU
291
n
160
LEU
291
B
SER
292
n
161
SER
292
B
ASP
293
n
162
ASP
293
B
ASN
294
n
163
ASN
294
B
ILE
295
n
164
ILE
295
B
SER
296
n
165
SER
296
B
ARG
297
n
166
ARG
297
B
LEU
298
n
167
LEU
298
B
LEU
299
n
168
LEU
299
B
ARG
300
n
169
ARG
300
B
THR
301
n
170
THR
301
B
ILE
302
n
171
ILE
302
B
n
1
132
C
n
2
133
C
n
3
134
C
MET
135
n
4
MET
135
C
ASP
136
n
5
ASP
136
C
VAL
137
n
6
VAL
137
C
ALA
138
n
7
ALA
138
C
ILE
139
n
8
ILE
139
C
ILE
140
n
9
ILE
140
C
GLY
141
n
10
GLY
141
C
ASP
142
n
11
ASP
142
C
SER
143
n
12
SER
143
C
ILE
144
n
13
ILE
144
C
VAL
145
n
14
VAL
145
C
ARG
146
n
15
ARG
146
C
HIS
147
n
16
HIS
147
C
VAL
148
n
17
VAL
148
C
ARG
149
n
18
ARG
149
C
ALA
150
n
19
ALA
150
C
n
20
151
C
n
21
152
C
n
22
153
C
n
23
154
C
n
24
155
C
ASN
156
n
25
ASN
156
C
LYS
157
n
26
LYS
157
C
VAL
158
n
27
VAL
158
C
ARG
159
n
28
ARG
159
C
THR
160
n
29
THR
160
C
PHE
161
n
30
PHE
161
C
CYS
162
n
31
CYS
162
C
PHE
163
n
32
PHE
163
C
PRO
164
n
33
PRO
164
C
GLY
165
n
34
GLY
165
C
ALA
166
n
35
ALA
166
C
ARG
167
n
36
ARG
167
C
VAL
168
n
37
VAL
168
C
LYS
169
n
38
LYS
169
C
ASN
170
n
39
ASN
170
C
ILE
171
n
40
ILE
171
C
SER
172
n
41
SER
172
C
THR
173
n
42
THR
173
C
GLN
174
n
43
GLN
174
C
ILE
175
n
44
ILE
175
C
PRO
176
n
45
PRO
176
C
THR
177
n
46
THR
177
C
ILE
178
n
47
ILE
178
C
LEU
179
n
48
LEU
179
C
n
49
180
C
n
50
181
C
n
51
182
C
n
52
183
C
SER
184
n
53
SER
184
C
PRO
185
n
54
PRO
185
C
GLY
186
n
55
GLY
186
C
ALA
187
n
56
ALA
187
C
VAL
188
n
57
VAL
188
C
VAL
189
n
58
VAL
189
C
LEU
190
n
59
LEU
190
C
HIS
191
n
60
HIS
191
C
VAL
192
n
61
VAL
192
C
GLY
193
n
62
GLY
193
C
THR
194
n
63
THR
194
C
ASN
195
n
64
ASN
195
C
ASP
196
n
65
ASP
196
C
THR
197
n
66
THR
197
C
GLY
198
n
67
GLY
198
C
LEU
199
n
68
LEU
199
C
ARG
200
n
69
ARG
200
C
GLN
201
n
70
GLN
201
C
SER
202
n
71
SER
202
C
GLU
203
n
72
GLU
203
C
ILE
204
n
73
ILE
204
C
LEU
205
n
74
LEU
205
C
LYS
206
n
75
LYS
206
C
LYS
207
n
76
LYS
207
C
ASP
208
n
77
ASP
208
C
PHE
209
n
78
PHE
209
C
ARG
210
n
79
ARG
210
C
SER
211
n
80
SER
211
C
LEU
212
n
81
LEU
212
C
ILE
213
n
82
ILE
213
C
GLU
214
n
83
GLU
214
C
THR
215
n
84
THR
215
C
VAL
216
n
85
VAL
216
C
ARG
217
n
86
ARG
217
C
ARG
218
n
87
ARG
218
C
THR
219
n
88
THR
219
C
SER
220
n
89
SER
220
C
PRO
221
n
90
PRO
221
C
ALA
222
n
91
ALA
222
C
THR
223
n
92
THR
223
C
GLN
224
n
93
GLN
224
C
ILE
225
n
94
ILE
225
C
ILE
226
n
95
ILE
226
C
VAL
227
n
96
VAL
227
C
SER
228
n
97
SER
228
C
GLY
229
n
98
GLY
229
C
PRO
230
n
99
PRO
230
C
LEU
231
n
100
LEU
231
C
PRO
232
n
101
PRO
232
C
THR
233
n
102
THR
233
C
TYR
234
n
103
TYR
234
C
ARG
235
n
104
ARG
235
C
ARG
236
n
105
ARG
236
C
GLY
237
n
106
GLY
237
C
ASN
238
n
107
ASN
238
C
GLU
239
n
108
GLU
239
C
ARG
240
n
109
ARG
240
C
PHE
241
n
110
PHE
241
C
SER
242
n
111
SER
242
C
ARG
243
n
112
ARG
243
C
LEU
244
n
113
LEU
244
C
LEU
245
n
114
LEU
245
C
ALA
246
n
115
ALA
246
C
LEU
247
n
116
LEU
247
C
ASN
248
n
117
ASN
248
C
GLU
249
n
118
GLU
249
C
TRP
250
n
119
TRP
250
C
LEU
251
n
120
LEU
251
C
ILE
252
n
121
ILE
252
C
THR
253
n
122
THR
253
C
TRP
254
n
123
TRP
254
C
CYS
255
n
124
CYS
255
C
LYS
256
n
125
LYS
256
C
GLU
257
n
126
GLU
257
C
GLN
258
n
127
GLN
258
C
LYS
259
n
128
LYS
259
C
LEU
260
n
129
LEU
260
C
LEU
261
n
130
LEU
261
C
PHE
262
n
131
PHE
262
C
ALA
263
n
132
ALA
263
C
ASN
264
n
133
ASN
264
C
ASN
265
n
134
ASN
265
C
TRP
266
n
135
TRP
266
C
ASN
267
n
136
ASN
267
C
LEU
268
n
137
LEU
268
C
PHE
269
n
138
PHE
269
C
TRP
270
n
139
TRP
270
C
GLU
271
n
140
GLU
271
C
ARG
272
n
141
ARG
272
C
PRO
273
n
142
PRO
273
C
ARG
274
n
143
ARG
274
C
LEU
275
n
144
LEU
275
C
PHE
276
n
145
PHE
276
C
ARG
277
n
146
ARG
277
C
PRO
278
n
147
PRO
278
C
ASP
279
n
148
ASP
279
C
GLY
280
n
149
GLY
280
C
LEU
281
n
150
LEU
281
C
HIS
282
n
151
HIS
282
C
PRO
283
n
152
PRO
283
C
SER
284
n
153
SER
284
C
ARG
285
n
154
ARG
285
C
ALA
286
n
155
ALA
286
C
GLY
287
n
156
GLY
287
C
ALA
288
n
157
ALA
288
C
GLU
289
n
158
GLU
289
C
LEU
290
n
159
LEU
290
C
LEU
291
n
160
LEU
291
C
SER
292
n
161
SER
292
C
ASP
293
n
162
ASP
293
C
ASN
294
n
163
ASN
294
C
ILE
295
n
164
ILE
295
C
SER
296
n
165
SER
296
C
ARG
297
n
166
ARG
297
C
LEU
298
n
167
LEU
298
C
LEU
299
n
168
LEU
299
C
ARG
300
n
169
ARG
300
C
THR
301
n
170
THR
301
C
n
171
302
C
2.8746
0.3272
-0.7561
1.5303
0.2228
0.9753
-0.1378
-0.3414
0.4466
0.2146
0.0956
0.2639
-0.2912
-0.3924
-0.0001
0.3934
0.0590
-0.0032
0.3982
-0.0359
0.3610
refined
18.4884
72.1829
-7.9610
X-RAY DIFFRACTION
3.9279
0.3218
-0.6802
3.7739
1.2377
2.1259
-0.2513
-0.1746
-0.3952
0.3022
0.0845
0.1596
0.1400
0.0519
-0.0061
0.3692
0.0257
0.0598
0.2601
0.0597
0.3388
refined
45.2545
44.3219
9.4634
X-RAY DIFFRACTION
3.9202
0.2448
0.4609
2.8752
2.5218
2.3146
-0.1593
-0.3464
-0.7030
0.3748
0.0551
0.6364
0.6415
-0.6022
-0.0079
0.4295
-0.0279
0.1227
0.4207
0.0433
0.6522
refined
34.8001
38.0323
9.9574
X-RAY DIFFRACTION
3.4460
0.7309
1.7284
1.0545
-0.5704
2.9909
-0.2276
0.0171
0.4924
-0.0593
0.0870
0.0976
-0.4785
0.0008
-0.0071
0.3658
0.0391
-0.0889
0.2897
-0.0320
0.3061
refined
31.6908
77.3539
-12.7442
X-RAY DIFFRACTION
1.6841
-0.6504
0.9965
1.2880
0.5964
1.5468
0.0218
0.9174
0.5047
-0.7263
-0.1309
0.2876
0.0961
0.1345
-0.0047
0.6967
0.0508
0.0303
0.9445
0.2371
0.4902
refined
57.3093
74.8599
-32.7893
X-RAY DIFFRACTION
2.4839
-0.3256
0.0263
2.2522
0.3522
2.8234
0.0626
0.4880
-0.5976
-0.5274
-0.1222
0.6241
-0.1767
-0.3872
-0.0139
0.4300
-0.0035
-0.0696
0.5898
-0.1886
0.5501
refined
50.4201
36.8792
-21.6479
X-RAY DIFFRACTION
X-RAY DIFFRACTION
1
CHAIN A AND (RESID 132 THROUGH 200 )
X-RAY DIFFRACTION
2
CHAIN A AND (RESID 201 THROUGH 302 )
X-RAY DIFFRACTION
3
CHAIN B AND (RESID 135 THROUGH 200 )
X-RAY DIFFRACTION
4
CHAIN B AND (RESID 238 THROUGH 302 )
X-RAY DIFFRACTION
5
CHAIN C AND (RESID 135 THROUGH 200 )
X-RAY DIFFRACTION
6
CHAIN C AND (RESID 201 THROUGH 301 )
author_and_software_defined_assembly
PISA
2
dimeric
author_and_software_defined_assembly
PISA
2
dimeric
6110
-39.3
17190
5530
-39.3
16580
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
6_665
-x+1,-y+1,z
crystal symmetry operation
111.2600000000
111.2600000000
0.0000000000
A
N
ARG
159
A
N
ARG
28
A
O
VAL
137
A
O
VAL
6
A
N
ALA
138
A
N
ALA
7
A
O
ALA
187
A
O
ALA
56
A
N
VAL
188
A
N
VAL
57
B
O
GLN
224
B
O
GLN
93
B
N
VAL
227
B
N
VAL
96
B
O
LEU
261
B
O
LEU
130
A
N
LEU
261
A
N
LEU
130
A
O
ILE
225
A
O
ILE
94
A
N
ILE
226
A
N
ILE
95
B
O
VAL
188
B
O
VAL
57
B
N
VAL
189
B
N
VAL
58
B
O
ALA
138
B
O
ALA
7
B
N
ILE
139
B
N
ILE
8
B
O
ARG
159
B
O
ARG
28
C
N
ARG
159
C
N
ARG
28
C
O
VAL
137
C
O
VAL
6
C
N
ALA
138
C
N
ALA
7
C
O
ALA
187
C
O
ALA
56
C
N
VAL
227
C
N
VAL
96
C
O
LEU
261
C
O
LEU
130
1
B
GLY
132
B
GLY
1
1
Y
1
B
PRO
133
B
PRO
2
1
Y
1
B
ALA
134
B
ALA
3
1
Y
1
C
GLY
132
C
GLY
1
1
Y
1
C
PRO
133
C
PRO
2
1
Y
1
C
ALA
134
C
ALA
3
1
Y
1
C
ALA
151
C
ALA
20
1
Y
1
C
SER
152
C
SER
21
1
Y
1
C
SER
153
C
SER
22
1
Y
1
C
LYS
154
C
LYS
23
1
Y
1
C
GLY
155
C
GLY
24
1
Y
1
C
GLY
180
C
GLY
49
1
Y
1
C
ALA
181
C
ALA
50
1
Y
1
C
ALA
182
C
ALA
51
1
Y
1
C
GLU
183
C
GLU
52
1
Y
1
C
ILE
302
C
ILE
171
1
Y
1
-3.31
0.50
120.30
116.99
C
C
C
NE
CZ
NH2
ARG
ARG
ARG
236
236
236
N
1
B
C
NH2
O
ARG
GLU
149
257
2.08
1_555
8_555
1
A
ASP
142
-75.47
-168.01
1
A
GLU
183
-94.42
40.53
1
A
SER
220
-151.46
81.05
1
A
ARG
236
-112.37
-156.10
1
A
LEU
281
-136.20
-60.09
1
B
LYS
154
71.10
38.46
1
B
SER
220
-170.97
81.40
1
B
LEU
281
-130.63
-47.18
1
C
ARG
149
-162.59
110.08
1
C
SER
220
-155.24
67.58
1
C
ARG
236
-102.48
-161.46
1
C
LEU
281
-137.47
-58.67
51.6
HYDROGENS WERE REFINED IN THE RIDING POSITIONS. THE FOLLOWING RESIDUES ARE DISORDERED. CHAIN B, RESIDUES 132 TO 134. CHAIN C, RESIDUES 132 TO 134, 151 TO 155, 180 TO 183 AND 302.
0.2099
0.1672
0.1694
2.501
45.709
1244
24346
5.1
99.98
0.30
1
2.04
SIRAS
21.04
0.90
1.11
NONE
ML
FLAT BULK SOLVENT MODEL
2.501
45.709
74
4025
0
0
3951
0.011
4031
1.182
5460
14.140
1519
0.060
623
0.006
699
0.2807
0.2190
2.6008
137
2533
100.00
0.2225
0.1967
2.7191
137
2583
100.00
0.2324
0.1803
2.8625
155
2536
100.00
0.2163
0.1869
3.0418
119
2558
100.00
0.2412
0.1908
3.2766
129
2578
100.00
0.2277
0.1777
3.6062
157
2552
100.00
0.2325
0.1588
4.1277
132
2574
100.00
0.1686
0.1441
5.1993
141
2570
100.00
0.1920
0.1570
45.7170
137
2618
100.00
51.51
2.50
46.00
4C1B
24355
-3.0
0.07
1
19.10
6.9
100.0
2.50
2.56
3.00
0.66
1
7.1
100.0
refinement
PHENIX
(PHENIX.REFINE)
data reduction
XDS
data scaling
XSCALE
phasing
SHELX
ORF1-ENCODED PROTEIN (E.C.3.1.-.-)
Esterase domain of the ZfL2-1 ORF1 protein from the zebrafish ZfL2-1 retrotransposon
1
N
N
1
N
N
1
N
N
2
N
N
2
N
N
2
N
N
A
VAL
168
A
VAL
37
HELX_P
A
LEU
179
A
LEU
48
1
1
12
A
GLN
201
A
GLN
70
HELX_P
A
THR
219
A
THR
88
1
2
19
A
ASN
238
A
ASN
107
HELX_P
A
GLU
257
A
GLU
126
1
3
20
A
TRP
266
A
TRP
135
HELX_P
A
PHE
269
A
PHE
138
1
4
4
A
ARG
285
A
ARG
154
HELX_P
A
LEU
299
A
LEU
168
1
5
15
B
VAL
168
B
VAL
37
HELX_P
B
ILE
178
B
ILE
47
1
6
11
B
THR
194
B
THR
63
HELX_P
B
THR
197
B
THR
66
1
7
4
B
GLN
201
B
GLN
70
HELX_P
B
THR
219
B
THR
88
1
8
19
B
ASN
238
B
ASN
107
HELX_P
B
GLU
257
B
GLU
126
1
9
20
B
ASN
265
B
ASN
134
HELX_P
B
PHE
269
B
PHE
138
1
10
5
B
ARG
285
B
ARG
154
HELX_P
B
LEU
299
B
LEU
168
1
11
15
C
VAL
168
C
VAL
37
HELX_P
C
THR
173
C
THR
42
1
12
6
C
ILE
175
C
ILE
44
HELX_P
C
ILE
178
C
ILE
47
1
13
4
C
GLN
201
C
GLN
70
HELX_P
C
THR
219
C
THR
88
1
14
19
C
ASN
238
C
ASN
107
HELX_P
C
GLU
257
C
GLU
126
1
15
20
C
TRP
266
C
TRP
135
HELX_P
C
PHE
269
C
PHE
138
1
16
4
C
ARG
285
C
ARG
154
HELX_P
C
ARG
300
C
ARG
169
1
17
16
HYDROLASE
HYDROLASE, RETROTRANSPOSITION, RNA-BINDING, MEMBRANE-BINDING, LIPID-BINDING, SELF-ASSOCIATION
Q3LG57_DANRE
UNP
1
Q3LG57
136
302
4C1B
136
302
Q3LG57
A
1
5
171
136
302
4C1B
136
302
Q3LG57
B
1
5
171
136
302
4C1B
136
302
Q3LG57
C
1
5
171
1
expression tag
GLY
132
4C1B
A
Q3LG57
UNP
1
1
expression tag
PRO
133
4C1B
A
Q3LG57
UNP
2
1
expression tag
ALA
134
4C1B
A
Q3LG57
UNP
3
1
expression tag
MET
135
4C1B
A
Q3LG57
UNP
4
2
expression tag
GLY
132
4C1B
B
Q3LG57
UNP
1
2
expression tag
PRO
133
4C1B
B
Q3LG57
UNP
2
2
expression tag
ALA
134
4C1B
B
Q3LG57
UNP
3
2
expression tag
MET
135
4C1B
B
Q3LG57
UNP
4
3
expression tag
GLY
132
4C1B
C
Q3LG57
UNP
1
3
expression tag
PRO
133
4C1B
C
Q3LG57
UNP
2
3
expression tag
ALA
134
4C1B
C
Q3LG57
UNP
3
3
expression tag
MET
135
4C1B
C
Q3LG57
UNP
4
5
5
3
2
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
A
VAL
158
A
VAL
27
A
CYS
162
A
CYS
31
A
VAL
137
A
VAL
6
A
GLY
141
A
GLY
10
A
ALA
187
A
ALA
56
A
HIS
191
A
HIS
60
B
GLN
224
B
GLN
93
B
SER
228
B
SER
97
B
LEU
261
B
LEU
130
B
ALA
263
B
ALA
132
A
LEU
261
A
LEU
130
A
ALA
263
A
ALA
132
A
GLN
224
A
GLN
93
A
SER
228
A
SER
97
B
ALA
187
B
ALA
56
B
HIS
191
B
HIS
60
B
VAL
137
B
VAL
6
B
GLY
141
B
GLY
10
B
VAL
158
B
VAL
27
B
CYS
162
B
CYS
31
C
LYS
157
C
LYS
26
C
CYS
162
C
CYS
31
C
ASP
136
C
ASP
5
C
GLY
141
C
GLY
10
C
ALA
187
C
ALA
56
C
HIS
191
C
HIS
60
C
ILE
226
C
ILE
95
C
SER
228
C
SER
97
C
LEU
261
C
LEU
130
C
ALA
263
C
ALA
132
80
I 41