0.008988 0.000000 0.000000 0.000000 0.008988 0.000000 0.000000 0.000000 0.008643 0.00000 0.00000 0.00000 Schneider, A.M. Weichenrieder, O. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 24 90.00 90.00 90.00 111.260 111.260 115.700 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK Nucleic Acids Res. NARHAD 0389 0305-1048 41 10563 10.1093/NAR/GKT786 24003030 Structure and Properties of the Esterase from Non-Ltr Retrotransposons Suggest a Role for Lipids in Retrotransposition. 2013 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 DYNAMICALLY BENDABLE MIRRORS PIXEL 2011-09-09 DECTRIS PILATUS 6M SI(111) SINGLE WAVELENGTH M x-ray 1 1.0000 1.0 1.0397 1.0 X10SA SLS 1.0, 1.0397 SYNCHROTRON SLS BEAMLINE X10SA 19141.092 ORF1-ENCODED PROTEIN 3.1.-.- SGNH ESTERASE DOMAIN, RESIDUES 136-302 3 man polymer 18.015 water 74 nat water ZFL2-1 ORF1P no no GPAMDVAIIGDSIVRHVRAASSKGNKVRTFCFPGARVKNISTQIPTILGAAESPGAVVLHVGTNDTGLRQSEILKKDFRS LIETVRRTSPATQIIVSGPLPTYRRGNERFSRLLALNEWLITWCKEQKLLFANNWNLFWERPRLFRPDGLHPSRAGAELL SDNISRLLRTI GPAMDVAIIGDSIVRHVRAASSKGNKVRTFCFPGARVKNISTQIPTILGAAESPGAVVLHVGTNDTGLRQSEILKKDFRS LIETVRRTSPATQIIVSGPLPTYRRGNERFSRLLALNEWLITWCKEQKLLFANNWNLFWERPRLFRPDGLHPSRAGAELL SDNISRLLRTI A,B,C polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n ZEBRAFISH sample SYNTHETIC CODON-OPTIMIZED DNA SEQUENCE 7955 DANIO RERIO 469008 ESCHERICHIA COLI BL21(DE3) STAR PETM41P 1 3.2 62 GOLD SITES WERE IDENTIFIED BY SIRAS, USING THE SECOND DATASET, COLLECTED AT 1.0397 A, PEAK DATA AT THE AU LIII-EDGE. 7.0 100 MM NA-HEPES PH=7.0, 0.5% JEFFAMINE, 1.1M NA-MALONATE. diffrn diffrn_source repository Initial release Database references Data collection 1 0 2013-09-11 1 1 2013-12-25 1 2 2017-10-18 COILED COIL DOMAIN OF THE ZFL2-1 ORF1 PROTEIN FROM THE ZEBRAFISH ZFL2-1 RETROTRANSPOSON PDBE Y PDBE 2013-08-11 REL HOH water THE FOUR N-TERMINAL RESIDUES REMAIN FROM THE EXPRESSION TAG. HOH 2001 2 HOH HOH 2001 A HOH 2002 2 HOH HOH 2002 A HOH 2003 2 HOH HOH 2003 A HOH 2004 2 HOH HOH 2004 A HOH 2005 2 HOH HOH 2005 A HOH 2006 2 HOH HOH 2006 A HOH 2007 2 HOH HOH 2007 A HOH 2008 2 HOH HOH 2008 A HOH 2009 2 HOH HOH 2009 A HOH 2010 2 HOH HOH 2010 A HOH 2011 2 HOH HOH 2011 A HOH 2012 2 HOH HOH 2012 A HOH 2013 2 HOH HOH 2013 A HOH 2014 2 HOH HOH 2014 A HOH 2015 2 HOH HOH 2015 A HOH 2016 2 HOH HOH 2016 A HOH 2017 2 HOH HOH 2017 A HOH 2018 2 HOH HOH 2018 A HOH 2019 2 HOH HOH 2019 A HOH 2020 2 HOH HOH 2020 A HOH 2021 2 HOH HOH 2021 A HOH 2022 2 HOH HOH 2022 A HOH 2023 2 HOH HOH 2023 A HOH 2024 2 HOH HOH 2024 A HOH 2025 2 HOH HOH 2025 A HOH 2026 2 HOH HOH 2026 A HOH 2027 2 HOH HOH 2027 A HOH 2028 2 HOH HOH 2028 A HOH 2029 2 HOH HOH 2029 A HOH 2030 2 HOH HOH 2030 A HOH 2031 2 HOH HOH 2031 A HOH 2032 2 HOH HOH 2032 A HOH 2033 2 HOH HOH 2033 A HOH 2034 2 HOH HOH 2034 A HOH 2035 2 HOH HOH 2035 A HOH 2036 2 HOH HOH 2036 A HOH 2037 2 HOH HOH 2037 A HOH 2038 2 HOH HOH 2038 A HOH 2001 2 HOH HOH 2001 B HOH 2002 2 HOH HOH 2002 B HOH 2003 2 HOH HOH 2003 B HOH 2004 2 HOH HOH 2004 B HOH 2005 2 HOH HOH 2005 B HOH 2006 2 HOH HOH 2006 B HOH 2007 2 HOH HOH 2007 B HOH 2008 2 HOH HOH 2008 B HOH 2009 2 HOH HOH 2009 B HOH 2010 2 HOH HOH 2010 B HOH 2011 2 HOH HOH 2011 B HOH 2012 2 HOH HOH 2012 B HOH 2013 2 HOH HOH 2013 B HOH 2014 2 HOH HOH 2014 B HOH 2015 2 HOH HOH 2015 B HOH 2016 2 HOH HOH 2016 B HOH 2017 2 HOH HOH 2017 B HOH 2018 2 HOH HOH 2018 B HOH 2019 2 HOH HOH 2019 B HOH 2020 2 HOH HOH 2020 B HOH 2021 2 HOH HOH 2021 B HOH 2022 2 HOH HOH 2022 B HOH 2023 2 HOH HOH 2023 B HOH 2024 2 HOH HOH 2024 B HOH 2025 2 HOH HOH 2025 B HOH 2001 2 HOH HOH 2001 C HOH 2002 2 HOH HOH 2002 C HOH 2003 2 HOH HOH 2003 C HOH 2004 2 HOH HOH 2004 C HOH 2005 2 HOH HOH 2005 C HOH 2006 2 HOH HOH 2006 C HOH 2007 2 HOH HOH 2007 C HOH 2008 2 HOH HOH 2008 C HOH 2009 2 HOH HOH 2009 C HOH 2010 2 HOH HOH 2010 C HOH 2011 2 HOH HOH 2011 C GLY 132 n 1 GLY 132 A PRO 133 n 2 PRO 133 A ALA 134 n 3 ALA 134 A MET 135 n 4 MET 135 A ASP 136 n 5 ASP 136 A VAL 137 n 6 VAL 137 A ALA 138 n 7 ALA 138 A ILE 139 n 8 ILE 139 A ILE 140 n 9 ILE 140 A GLY 141 n 10 GLY 141 A ASP 142 n 11 ASP 142 A SER 143 n 12 SER 143 A ILE 144 n 13 ILE 144 A VAL 145 n 14 VAL 145 A ARG 146 n 15 ARG 146 A HIS 147 n 16 HIS 147 A VAL 148 n 17 VAL 148 A ARG 149 n 18 ARG 149 A ALA 150 n 19 ALA 150 A ALA 151 n 20 ALA 151 A SER 152 n 21 SER 152 A SER 153 n 22 SER 153 A LYS 154 n 23 LYS 154 A GLY 155 n 24 GLY 155 A ASN 156 n 25 ASN 156 A LYS 157 n 26 LYS 157 A VAL 158 n 27 VAL 158 A ARG 159 n 28 ARG 159 A THR 160 n 29 THR 160 A PHE 161 n 30 PHE 161 A CYS 162 n 31 CYS 162 A PHE 163 n 32 PHE 163 A PRO 164 n 33 PRO 164 A GLY 165 n 34 GLY 165 A ALA 166 n 35 ALA 166 A ARG 167 n 36 ARG 167 A VAL 168 n 37 VAL 168 A LYS 169 n 38 LYS 169 A ASN 170 n 39 ASN 170 A ILE 171 n 40 ILE 171 A SER 172 n 41 SER 172 A THR 173 n 42 THR 173 A GLN 174 n 43 GLN 174 A ILE 175 n 44 ILE 175 A PRO 176 n 45 PRO 176 A THR 177 n 46 THR 177 A ILE 178 n 47 ILE 178 A LEU 179 n 48 LEU 179 A GLY 180 n 49 GLY 180 A ALA 181 n 50 ALA 181 A ALA 182 n 51 ALA 182 A GLU 183 n 52 GLU 183 A SER 184 n 53 SER 184 A PRO 185 n 54 PRO 185 A GLY 186 n 55 GLY 186 A ALA 187 n 56 ALA 187 A VAL 188 n 57 VAL 188 A VAL 189 n 58 VAL 189 A LEU 190 n 59 LEU 190 A HIS 191 n 60 HIS 191 A VAL 192 n 61 VAL 192 A GLY 193 n 62 GLY 193 A THR 194 n 63 THR 194 A ASN 195 n 64 ASN 195 A ASP 196 n 65 ASP 196 A THR 197 n 66 THR 197 A GLY 198 n 67 GLY 198 A LEU 199 n 68 LEU 199 A ARG 200 n 69 ARG 200 A GLN 201 n 70 GLN 201 A SER 202 n 71 SER 202 A GLU 203 n 72 GLU 203 A ILE 204 n 73 ILE 204 A LEU 205 n 74 LEU 205 A LYS 206 n 75 LYS 206 A LYS 207 n 76 LYS 207 A ASP 208 n 77 ASP 208 A PHE 209 n 78 PHE 209 A ARG 210 n 79 ARG 210 A SER 211 n 80 SER 211 A LEU 212 n 81 LEU 212 A ILE 213 n 82 ILE 213 A GLU 214 n 83 GLU 214 A THR 215 n 84 THR 215 A VAL 216 n 85 VAL 216 A ARG 217 n 86 ARG 217 A ARG 218 n 87 ARG 218 A THR 219 n 88 THR 219 A SER 220 n 89 SER 220 A PRO 221 n 90 PRO 221 A ALA 222 n 91 ALA 222 A THR 223 n 92 THR 223 A GLN 224 n 93 GLN 224 A ILE 225 n 94 ILE 225 A ILE 226 n 95 ILE 226 A VAL 227 n 96 VAL 227 A SER 228 n 97 SER 228 A GLY 229 n 98 GLY 229 A PRO 230 n 99 PRO 230 A LEU 231 n 100 LEU 231 A PRO 232 n 101 PRO 232 A THR 233 n 102 THR 233 A TYR 234 n 103 TYR 234 A ARG 235 n 104 ARG 235 A ARG 236 n 105 ARG 236 A GLY 237 n 106 GLY 237 A ASN 238 n 107 ASN 238 A GLU 239 n 108 GLU 239 A ARG 240 n 109 ARG 240 A PHE 241 n 110 PHE 241 A SER 242 n 111 SER 242 A ARG 243 n 112 ARG 243 A LEU 244 n 113 LEU 244 A LEU 245 n 114 LEU 245 A ALA 246 n 115 ALA 246 A LEU 247 n 116 LEU 247 A ASN 248 n 117 ASN 248 A GLU 249 n 118 GLU 249 A TRP 250 n 119 TRP 250 A LEU 251 n 120 LEU 251 A ILE 252 n 121 ILE 252 A THR 253 n 122 THR 253 A TRP 254 n 123 TRP 254 A CYS 255 n 124 CYS 255 A LYS 256 n 125 LYS 256 A GLU 257 n 126 GLU 257 A GLN 258 n 127 GLN 258 A LYS 259 n 128 LYS 259 A LEU 260 n 129 LEU 260 A LEU 261 n 130 LEU 261 A PHE 262 n 131 PHE 262 A ALA 263 n 132 ALA 263 A ASN 264 n 133 ASN 264 A ASN 265 n 134 ASN 265 A TRP 266 n 135 TRP 266 A ASN 267 n 136 ASN 267 A LEU 268 n 137 LEU 268 A PHE 269 n 138 PHE 269 A TRP 270 n 139 TRP 270 A GLU 271 n 140 GLU 271 A ARG 272 n 141 ARG 272 A PRO 273 n 142 PRO 273 A ARG 274 n 143 ARG 274 A LEU 275 n 144 LEU 275 A PHE 276 n 145 PHE 276 A ARG 277 n 146 ARG 277 A PRO 278 n 147 PRO 278 A ASP 279 n 148 ASP 279 A GLY 280 n 149 GLY 280 A LEU 281 n 150 LEU 281 A HIS 282 n 151 HIS 282 A PRO 283 n 152 PRO 283 A SER 284 n 153 SER 284 A ARG 285 n 154 ARG 285 A ALA 286 n 155 ALA 286 A GLY 287 n 156 GLY 287 A ALA 288 n 157 ALA 288 A GLU 289 n 158 GLU 289 A LEU 290 n 159 LEU 290 A LEU 291 n 160 LEU 291 A SER 292 n 161 SER 292 A ASP 293 n 162 ASP 293 A ASN 294 n 163 ASN 294 A ILE 295 n 164 ILE 295 A SER 296 n 165 SER 296 A ARG 297 n 166 ARG 297 A LEU 298 n 167 LEU 298 A LEU 299 n 168 LEU 299 A ARG 300 n 169 ARG 300 A THR 301 n 170 THR 301 A ILE 302 n 171 ILE 302 A n 1 132 B n 2 133 B n 3 134 B MET 135 n 4 MET 135 B ASP 136 n 5 ASP 136 B VAL 137 n 6 VAL 137 B ALA 138 n 7 ALA 138 B ILE 139 n 8 ILE 139 B ILE 140 n 9 ILE 140 B GLY 141 n 10 GLY 141 B ASP 142 n 11 ASP 142 B SER 143 n 12 SER 143 B ILE 144 n 13 ILE 144 B VAL 145 n 14 VAL 145 B ARG 146 n 15 ARG 146 B HIS 147 n 16 HIS 147 B VAL 148 n 17 VAL 148 B ARG 149 n 18 ARG 149 B ALA 150 n 19 ALA 150 B ALA 151 n 20 ALA 151 B SER 152 n 21 SER 152 B SER 153 n 22 SER 153 B LYS 154 n 23 LYS 154 B GLY 155 n 24 GLY 155 B ASN 156 n 25 ASN 156 B LYS 157 n 26 LYS 157 B VAL 158 n 27 VAL 158 B ARG 159 n 28 ARG 159 B THR 160 n 29 THR 160 B PHE 161 n 30 PHE 161 B CYS 162 n 31 CYS 162 B PHE 163 n 32 PHE 163 B PRO 164 n 33 PRO 164 B GLY 165 n 34 GLY 165 B ALA 166 n 35 ALA 166 B ARG 167 n 36 ARG 167 B VAL 168 n 37 VAL 168 B LYS 169 n 38 LYS 169 B ASN 170 n 39 ASN 170 B ILE 171 n 40 ILE 171 B SER 172 n 41 SER 172 B THR 173 n 42 THR 173 B GLN 174 n 43 GLN 174 B ILE 175 n 44 ILE 175 B PRO 176 n 45 PRO 176 B THR 177 n 46 THR 177 B ILE 178 n 47 ILE 178 B LEU 179 n 48 LEU 179 B GLY 180 n 49 GLY 180 B ALA 181 n 50 ALA 181 B ALA 182 n 51 ALA 182 B GLU 183 n 52 GLU 183 B SER 184 n 53 SER 184 B PRO 185 n 54 PRO 185 B GLY 186 n 55 GLY 186 B ALA 187 n 56 ALA 187 B VAL 188 n 57 VAL 188 B VAL 189 n 58 VAL 189 B LEU 190 n 59 LEU 190 B HIS 191 n 60 HIS 191 B VAL 192 n 61 VAL 192 B GLY 193 n 62 GLY 193 B THR 194 n 63 THR 194 B ASN 195 n 64 ASN 195 B ASP 196 n 65 ASP 196 B THR 197 n 66 THR 197 B GLY 198 n 67 GLY 198 B LEU 199 n 68 LEU 199 B ARG 200 n 69 ARG 200 B GLN 201 n 70 GLN 201 B SER 202 n 71 SER 202 B GLU 203 n 72 GLU 203 B ILE 204 n 73 ILE 204 B LEU 205 n 74 LEU 205 B LYS 206 n 75 LYS 206 B LYS 207 n 76 LYS 207 B ASP 208 n 77 ASP 208 B PHE 209 n 78 PHE 209 B ARG 210 n 79 ARG 210 B SER 211 n 80 SER 211 B LEU 212 n 81 LEU 212 B ILE 213 n 82 ILE 213 B GLU 214 n 83 GLU 214 B THR 215 n 84 THR 215 B VAL 216 n 85 VAL 216 B ARG 217 n 86 ARG 217 B ARG 218 n 87 ARG 218 B THR 219 n 88 THR 219 B SER 220 n 89 SER 220 B PRO 221 n 90 PRO 221 B ALA 222 n 91 ALA 222 B THR 223 n 92 THR 223 B GLN 224 n 93 GLN 224 B ILE 225 n 94 ILE 225 B ILE 226 n 95 ILE 226 B VAL 227 n 96 VAL 227 B SER 228 n 97 SER 228 B GLY 229 n 98 GLY 229 B PRO 230 n 99 PRO 230 B LEU 231 n 100 LEU 231 B PRO 232 n 101 PRO 232 B THR 233 n 102 THR 233 B TYR 234 n 103 TYR 234 B ARG 235 n 104 ARG 235 B ARG 236 n 105 ARG 236 B GLY 237 n 106 GLY 237 B ASN 238 n 107 ASN 238 B GLU 239 n 108 GLU 239 B ARG 240 n 109 ARG 240 B PHE 241 n 110 PHE 241 B SER 242 n 111 SER 242 B ARG 243 n 112 ARG 243 B LEU 244 n 113 LEU 244 B LEU 245 n 114 LEU 245 B ALA 246 n 115 ALA 246 B LEU 247 n 116 LEU 247 B ASN 248 n 117 ASN 248 B GLU 249 n 118 GLU 249 B TRP 250 n 119 TRP 250 B LEU 251 n 120 LEU 251 B ILE 252 n 121 ILE 252 B THR 253 n 122 THR 253 B TRP 254 n 123 TRP 254 B CYS 255 n 124 CYS 255 B LYS 256 n 125 LYS 256 B GLU 257 n 126 GLU 257 B GLN 258 n 127 GLN 258 B LYS 259 n 128 LYS 259 B LEU 260 n 129 LEU 260 B LEU 261 n 130 LEU 261 B PHE 262 n 131 PHE 262 B ALA 263 n 132 ALA 263 B ASN 264 n 133 ASN 264 B ASN 265 n 134 ASN 265 B TRP 266 n 135 TRP 266 B ASN 267 n 136 ASN 267 B LEU 268 n 137 LEU 268 B PHE 269 n 138 PHE 269 B TRP 270 n 139 TRP 270 B GLU 271 n 140 GLU 271 B ARG 272 n 141 ARG 272 B PRO 273 n 142 PRO 273 B ARG 274 n 143 ARG 274 B LEU 275 n 144 LEU 275 B PHE 276 n 145 PHE 276 B ARG 277 n 146 ARG 277 B PRO 278 n 147 PRO 278 B ASP 279 n 148 ASP 279 B GLY 280 n 149 GLY 280 B LEU 281 n 150 LEU 281 B HIS 282 n 151 HIS 282 B PRO 283 n 152 PRO 283 B SER 284 n 153 SER 284 B ARG 285 n 154 ARG 285 B ALA 286 n 155 ALA 286 B GLY 287 n 156 GLY 287 B ALA 288 n 157 ALA 288 B GLU 289 n 158 GLU 289 B LEU 290 n 159 LEU 290 B LEU 291 n 160 LEU 291 B SER 292 n 161 SER 292 B ASP 293 n 162 ASP 293 B ASN 294 n 163 ASN 294 B ILE 295 n 164 ILE 295 B SER 296 n 165 SER 296 B ARG 297 n 166 ARG 297 B LEU 298 n 167 LEU 298 B LEU 299 n 168 LEU 299 B ARG 300 n 169 ARG 300 B THR 301 n 170 THR 301 B ILE 302 n 171 ILE 302 B n 1 132 C n 2 133 C n 3 134 C MET 135 n 4 MET 135 C ASP 136 n 5 ASP 136 C VAL 137 n 6 VAL 137 C ALA 138 n 7 ALA 138 C ILE 139 n 8 ILE 139 C ILE 140 n 9 ILE 140 C GLY 141 n 10 GLY 141 C ASP 142 n 11 ASP 142 C SER 143 n 12 SER 143 C ILE 144 n 13 ILE 144 C VAL 145 n 14 VAL 145 C ARG 146 n 15 ARG 146 C HIS 147 n 16 HIS 147 C VAL 148 n 17 VAL 148 C ARG 149 n 18 ARG 149 C ALA 150 n 19 ALA 150 C n 20 151 C n 21 152 C n 22 153 C n 23 154 C n 24 155 C ASN 156 n 25 ASN 156 C LYS 157 n 26 LYS 157 C VAL 158 n 27 VAL 158 C ARG 159 n 28 ARG 159 C THR 160 n 29 THR 160 C PHE 161 n 30 PHE 161 C CYS 162 n 31 CYS 162 C PHE 163 n 32 PHE 163 C PRO 164 n 33 PRO 164 C GLY 165 n 34 GLY 165 C ALA 166 n 35 ALA 166 C ARG 167 n 36 ARG 167 C VAL 168 n 37 VAL 168 C LYS 169 n 38 LYS 169 C ASN 170 n 39 ASN 170 C ILE 171 n 40 ILE 171 C SER 172 n 41 SER 172 C THR 173 n 42 THR 173 C GLN 174 n 43 GLN 174 C ILE 175 n 44 ILE 175 C PRO 176 n 45 PRO 176 C THR 177 n 46 THR 177 C ILE 178 n 47 ILE 178 C LEU 179 n 48 LEU 179 C n 49 180 C n 50 181 C n 51 182 C n 52 183 C SER 184 n 53 SER 184 C PRO 185 n 54 PRO 185 C GLY 186 n 55 GLY 186 C ALA 187 n 56 ALA 187 C VAL 188 n 57 VAL 188 C VAL 189 n 58 VAL 189 C LEU 190 n 59 LEU 190 C HIS 191 n 60 HIS 191 C VAL 192 n 61 VAL 192 C GLY 193 n 62 GLY 193 C THR 194 n 63 THR 194 C ASN 195 n 64 ASN 195 C ASP 196 n 65 ASP 196 C THR 197 n 66 THR 197 C GLY 198 n 67 GLY 198 C LEU 199 n 68 LEU 199 C ARG 200 n 69 ARG 200 C GLN 201 n 70 GLN 201 C SER 202 n 71 SER 202 C GLU 203 n 72 GLU 203 C ILE 204 n 73 ILE 204 C LEU 205 n 74 LEU 205 C LYS 206 n 75 LYS 206 C LYS 207 n 76 LYS 207 C ASP 208 n 77 ASP 208 C PHE 209 n 78 PHE 209 C ARG 210 n 79 ARG 210 C SER 211 n 80 SER 211 C LEU 212 n 81 LEU 212 C ILE 213 n 82 ILE 213 C GLU 214 n 83 GLU 214 C THR 215 n 84 THR 215 C VAL 216 n 85 VAL 216 C ARG 217 n 86 ARG 217 C ARG 218 n 87 ARG 218 C THR 219 n 88 THR 219 C SER 220 n 89 SER 220 C PRO 221 n 90 PRO 221 C ALA 222 n 91 ALA 222 C THR 223 n 92 THR 223 C GLN 224 n 93 GLN 224 C ILE 225 n 94 ILE 225 C ILE 226 n 95 ILE 226 C VAL 227 n 96 VAL 227 C SER 228 n 97 SER 228 C GLY 229 n 98 GLY 229 C PRO 230 n 99 PRO 230 C LEU 231 n 100 LEU 231 C PRO 232 n 101 PRO 232 C THR 233 n 102 THR 233 C TYR 234 n 103 TYR 234 C ARG 235 n 104 ARG 235 C ARG 236 n 105 ARG 236 C GLY 237 n 106 GLY 237 C ASN 238 n 107 ASN 238 C GLU 239 n 108 GLU 239 C ARG 240 n 109 ARG 240 C PHE 241 n 110 PHE 241 C SER 242 n 111 SER 242 C ARG 243 n 112 ARG 243 C LEU 244 n 113 LEU 244 C LEU 245 n 114 LEU 245 C ALA 246 n 115 ALA 246 C LEU 247 n 116 LEU 247 C ASN 248 n 117 ASN 248 C GLU 249 n 118 GLU 249 C TRP 250 n 119 TRP 250 C LEU 251 n 120 LEU 251 C ILE 252 n 121 ILE 252 C THR 253 n 122 THR 253 C TRP 254 n 123 TRP 254 C CYS 255 n 124 CYS 255 C LYS 256 n 125 LYS 256 C GLU 257 n 126 GLU 257 C GLN 258 n 127 GLN 258 C LYS 259 n 128 LYS 259 C LEU 260 n 129 LEU 260 C LEU 261 n 130 LEU 261 C PHE 262 n 131 PHE 262 C ALA 263 n 132 ALA 263 C ASN 264 n 133 ASN 264 C ASN 265 n 134 ASN 265 C TRP 266 n 135 TRP 266 C ASN 267 n 136 ASN 267 C LEU 268 n 137 LEU 268 C PHE 269 n 138 PHE 269 C TRP 270 n 139 TRP 270 C GLU 271 n 140 GLU 271 C ARG 272 n 141 ARG 272 C PRO 273 n 142 PRO 273 C ARG 274 n 143 ARG 274 C LEU 275 n 144 LEU 275 C PHE 276 n 145 PHE 276 C ARG 277 n 146 ARG 277 C PRO 278 n 147 PRO 278 C ASP 279 n 148 ASP 279 C GLY 280 n 149 GLY 280 C LEU 281 n 150 LEU 281 C HIS 282 n 151 HIS 282 C PRO 283 n 152 PRO 283 C SER 284 n 153 SER 284 C ARG 285 n 154 ARG 285 C ALA 286 n 155 ALA 286 C GLY 287 n 156 GLY 287 C ALA 288 n 157 ALA 288 C GLU 289 n 158 GLU 289 C LEU 290 n 159 LEU 290 C LEU 291 n 160 LEU 291 C SER 292 n 161 SER 292 C ASP 293 n 162 ASP 293 C ASN 294 n 163 ASN 294 C ILE 295 n 164 ILE 295 C SER 296 n 165 SER 296 C ARG 297 n 166 ARG 297 C LEU 298 n 167 LEU 298 C LEU 299 n 168 LEU 299 C ARG 300 n 169 ARG 300 C THR 301 n 170 THR 301 C n 171 302 C 2.8746 0.3272 -0.7561 1.5303 0.2228 0.9753 -0.1378 -0.3414 0.4466 0.2146 0.0956 0.2639 -0.2912 -0.3924 -0.0001 0.3934 0.0590 -0.0032 0.3982 -0.0359 0.3610 refined 18.4884 72.1829 -7.9610 X-RAY DIFFRACTION 3.9279 0.3218 -0.6802 3.7739 1.2377 2.1259 -0.2513 -0.1746 -0.3952 0.3022 0.0845 0.1596 0.1400 0.0519 -0.0061 0.3692 0.0257 0.0598 0.2601 0.0597 0.3388 refined 45.2545 44.3219 9.4634 X-RAY DIFFRACTION 3.9202 0.2448 0.4609 2.8752 2.5218 2.3146 -0.1593 -0.3464 -0.7030 0.3748 0.0551 0.6364 0.6415 -0.6022 -0.0079 0.4295 -0.0279 0.1227 0.4207 0.0433 0.6522 refined 34.8001 38.0323 9.9574 X-RAY DIFFRACTION 3.4460 0.7309 1.7284 1.0545 -0.5704 2.9909 -0.2276 0.0171 0.4924 -0.0593 0.0870 0.0976 -0.4785 0.0008 -0.0071 0.3658 0.0391 -0.0889 0.2897 -0.0320 0.3061 refined 31.6908 77.3539 -12.7442 X-RAY DIFFRACTION 1.6841 -0.6504 0.9965 1.2880 0.5964 1.5468 0.0218 0.9174 0.5047 -0.7263 -0.1309 0.2876 0.0961 0.1345 -0.0047 0.6967 0.0508 0.0303 0.9445 0.2371 0.4902 refined 57.3093 74.8599 -32.7893 X-RAY DIFFRACTION 2.4839 -0.3256 0.0263 2.2522 0.3522 2.8234 0.0626 0.4880 -0.5976 -0.5274 -0.1222 0.6241 -0.1767 -0.3872 -0.0139 0.4300 -0.0035 -0.0696 0.5898 -0.1886 0.5501 refined 50.4201 36.8792 -21.6479 X-RAY DIFFRACTION X-RAY DIFFRACTION 1 CHAIN A AND (RESID 132 THROUGH 200 ) X-RAY DIFFRACTION 2 CHAIN A AND (RESID 201 THROUGH 302 ) X-RAY DIFFRACTION 3 CHAIN B AND (RESID 135 THROUGH 200 ) X-RAY DIFFRACTION 4 CHAIN B AND (RESID 238 THROUGH 302 ) X-RAY DIFFRACTION 5 CHAIN C AND (RESID 135 THROUGH 200 ) X-RAY DIFFRACTION 6 CHAIN C AND (RESID 201 THROUGH 301 ) author_and_software_defined_assembly PISA 2 dimeric author_and_software_defined_assembly PISA 2 dimeric 6110 -39.3 17190 5530 -39.3 16580 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 6_665 -x+1,-y+1,z crystal symmetry operation 111.2600000000 111.2600000000 0.0000000000 A N ARG 159 A N ARG 28 A O VAL 137 A O VAL 6 A N ALA 138 A N ALA 7 A O ALA 187 A O ALA 56 A N VAL 188 A N VAL 57 B O GLN 224 B O GLN 93 B N VAL 227 B N VAL 96 B O LEU 261 B O LEU 130 A N LEU 261 A N LEU 130 A O ILE 225 A O ILE 94 A N ILE 226 A N ILE 95 B O VAL 188 B O VAL 57 B N VAL 189 B N VAL 58 B O ALA 138 B O ALA 7 B N ILE 139 B N ILE 8 B O ARG 159 B O ARG 28 C N ARG 159 C N ARG 28 C O VAL 137 C O VAL 6 C N ALA 138 C N ALA 7 C O ALA 187 C O ALA 56 C N VAL 227 C N VAL 96 C O LEU 261 C O LEU 130 1 B GLY 132 B GLY 1 1 Y 1 B PRO 133 B PRO 2 1 Y 1 B ALA 134 B ALA 3 1 Y 1 C GLY 132 C GLY 1 1 Y 1 C PRO 133 C PRO 2 1 Y 1 C ALA 134 C ALA 3 1 Y 1 C ALA 151 C ALA 20 1 Y 1 C SER 152 C SER 21 1 Y 1 C SER 153 C SER 22 1 Y 1 C LYS 154 C LYS 23 1 Y 1 C GLY 155 C GLY 24 1 Y 1 C GLY 180 C GLY 49 1 Y 1 C ALA 181 C ALA 50 1 Y 1 C ALA 182 C ALA 51 1 Y 1 C GLU 183 C GLU 52 1 Y 1 C ILE 302 C ILE 171 1 Y 1 -3.31 0.50 120.30 116.99 C C C NE CZ NH2 ARG ARG ARG 236 236 236 N 1 B C NH2 O ARG GLU 149 257 2.08 1_555 8_555 1 A ASP 142 -75.47 -168.01 1 A GLU 183 -94.42 40.53 1 A SER 220 -151.46 81.05 1 A ARG 236 -112.37 -156.10 1 A LEU 281 -136.20 -60.09 1 B LYS 154 71.10 38.46 1 B SER 220 -170.97 81.40 1 B LEU 281 -130.63 -47.18 1 C ARG 149 -162.59 110.08 1 C SER 220 -155.24 67.58 1 C ARG 236 -102.48 -161.46 1 C LEU 281 -137.47 -58.67 51.6 HYDROGENS WERE REFINED IN THE RIDING POSITIONS. THE FOLLOWING RESIDUES ARE DISORDERED. CHAIN B, RESIDUES 132 TO 134. CHAIN C, RESIDUES 132 TO 134, 151 TO 155, 180 TO 183 AND 302. 0.2099 0.1672 0.1694 2.501 45.709 1244 24346 5.1 99.98 0.30 1 2.04 SIRAS 21.04 0.90 1.11 NONE ML FLAT BULK SOLVENT MODEL 2.501 45.709 74 4025 0 0 3951 0.011 4031 1.182 5460 14.140 1519 0.060 623 0.006 699 0.2807 0.2190 2.6008 137 2533 100.00 0.2225 0.1967 2.7191 137 2583 100.00 0.2324 0.1803 2.8625 155 2536 100.00 0.2163 0.1869 3.0418 119 2558 100.00 0.2412 0.1908 3.2766 129 2578 100.00 0.2277 0.1777 3.6062 157 2552 100.00 0.2325 0.1588 4.1277 132 2574 100.00 0.1686 0.1441 5.1993 141 2570 100.00 0.1920 0.1570 45.7170 137 2618 100.00 51.51 2.50 46.00 4C1B 24355 -3.0 0.07 1 19.10 6.9 100.0 2.50 2.56 3.00 0.66 1 7.1 100.0 refinement PHENIX (PHENIX.REFINE) data reduction XDS data scaling XSCALE phasing SHELX ORF1-ENCODED PROTEIN (E.C.3.1.-.-) Esterase domain of the ZfL2-1 ORF1 protein from the zebrafish ZfL2-1 retrotransposon 1 N N 1 N N 1 N N 2 N N 2 N N 2 N N A VAL 168 A VAL 37 HELX_P A LEU 179 A LEU 48 1 1 12 A GLN 201 A GLN 70 HELX_P A THR 219 A THR 88 1 2 19 A ASN 238 A ASN 107 HELX_P A GLU 257 A GLU 126 1 3 20 A TRP 266 A TRP 135 HELX_P A PHE 269 A PHE 138 1 4 4 A ARG 285 A ARG 154 HELX_P A LEU 299 A LEU 168 1 5 15 B VAL 168 B VAL 37 HELX_P B ILE 178 B ILE 47 1 6 11 B THR 194 B THR 63 HELX_P B THR 197 B THR 66 1 7 4 B GLN 201 B GLN 70 HELX_P B THR 219 B THR 88 1 8 19 B ASN 238 B ASN 107 HELX_P B GLU 257 B GLU 126 1 9 20 B ASN 265 B ASN 134 HELX_P B PHE 269 B PHE 138 1 10 5 B ARG 285 B ARG 154 HELX_P B LEU 299 B LEU 168 1 11 15 C VAL 168 C VAL 37 HELX_P C THR 173 C THR 42 1 12 6 C ILE 175 C ILE 44 HELX_P C ILE 178 C ILE 47 1 13 4 C GLN 201 C GLN 70 HELX_P C THR 219 C THR 88 1 14 19 C ASN 238 C ASN 107 HELX_P C GLU 257 C GLU 126 1 15 20 C TRP 266 C TRP 135 HELX_P C PHE 269 C PHE 138 1 16 4 C ARG 285 C ARG 154 HELX_P C ARG 300 C ARG 169 1 17 16 HYDROLASE HYDROLASE, RETROTRANSPOSITION, RNA-BINDING, MEMBRANE-BINDING, LIPID-BINDING, SELF-ASSOCIATION Q3LG57_DANRE UNP 1 Q3LG57 136 302 4C1B 136 302 Q3LG57 A 1 5 171 136 302 4C1B 136 302 Q3LG57 B 1 5 171 136 302 4C1B 136 302 Q3LG57 C 1 5 171 1 expression tag GLY 132 4C1B A Q3LG57 UNP 1 1 expression tag PRO 133 4C1B A Q3LG57 UNP 2 1 expression tag ALA 134 4C1B A Q3LG57 UNP 3 1 expression tag MET 135 4C1B A Q3LG57 UNP 4 2 expression tag GLY 132 4C1B B Q3LG57 UNP 1 2 expression tag PRO 133 4C1B B Q3LG57 UNP 2 2 expression tag ALA 134 4C1B B Q3LG57 UNP 3 2 expression tag MET 135 4C1B B Q3LG57 UNP 4 3 expression tag GLY 132 4C1B C Q3LG57 UNP 1 3 expression tag PRO 133 4C1B C Q3LG57 UNP 2 3 expression tag ALA 134 4C1B C Q3LG57 UNP 3 3 expression tag MET 135 4C1B C Q3LG57 UNP 4 5 5 3 2 parallel parallel parallel parallel parallel parallel parallel parallel parallel parallel parallel A VAL 158 A VAL 27 A CYS 162 A CYS 31 A VAL 137 A VAL 6 A GLY 141 A GLY 10 A ALA 187 A ALA 56 A HIS 191 A HIS 60 B GLN 224 B GLN 93 B SER 228 B SER 97 B LEU 261 B LEU 130 B ALA 263 B ALA 132 A LEU 261 A LEU 130 A ALA 263 A ALA 132 A GLN 224 A GLN 93 A SER 228 A SER 97 B ALA 187 B ALA 56 B HIS 191 B HIS 60 B VAL 137 B VAL 6 B GLY 141 B GLY 10 B VAL 158 B VAL 27 B CYS 162 B CYS 31 C LYS 157 C LYS 26 C CYS 162 C CYS 31 C ASP 136 C ASP 5 C GLY 141 C GLY 10 C ALA 187 C ALA 56 C HIS 191 C HIS 60 C ILE 226 C ILE 95 C SER 228 C SER 97 C LEU 261 C LEU 130 C ALA 263 C ALA 132 80 I 41