0.013947 0.008052 0.000000 0.000000 0.016105 0.000000 0.000000 0.000000 0.009365 0.00000 0.00000 0.00000 Priet, S. Ferron, F. Alvarez, K. Verron, M. Canard, B. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 12 90.00 90.00 120.00 71.700 71.700 106.780 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C4 H10 O3 106.120 DI(HYDROXYETHYL)ETHER non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C N 79 N C N 80 N C N 81 N O N 82 N N N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N N N 95 S C N 96 N C N 97 N O N 98 N C N 99 N C N 100 N C N 101 N O N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N N N 114 N C N 115 N C N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N N N 124 S C N 125 N C N 126 N O N 127 N C Y 128 N C Y 129 N N Y 130 N C Y 131 N C Y 132 N N N 133 N O N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N O N 145 N H N 146 N H N 147 N N N 148 S C N 149 N C N 150 N O N 151 S C N 152 N C N 153 N C N 154 N C N 155 N O N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N N N 170 S C N 171 N C N 172 N O N 173 N C N 174 N C N 175 N C N 176 N C N 177 N O N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N N N 192 S C N 193 N C N 194 N O N 195 N C N 196 N C N 197 N C N 198 N C N 199 N N N 200 N O N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N N N 217 S C N 218 N C N 219 N O N 220 N C N 221 N C N 222 N S N 223 N C N 224 N O N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N C N 237 N O N 238 N C N 239 N O N 240 N C N 241 N C N 242 N O N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N N N 254 S C N 255 N C N 256 N O N 257 N C Y 258 N C Y 259 N C Y 260 N C Y 261 N C Y 262 N C Y 263 N C N 264 N O N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N N N 277 S C N 278 N C N 279 N O N 280 N C N 281 N C N 282 N C N 283 N O N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N N N 294 S C N 295 N C N 296 N O N 297 N C N 298 N O N 299 N O N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N N N 308 S C N 309 N C N 310 N O N 311 R C N 312 N O N 313 N C N 314 N O N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N N N 325 S C N 326 N C N 327 N O N 328 N C Y 329 N C Y 330 N C Y 331 N C Y 332 N N Y 333 N C Y 334 N C Y 335 N C Y 336 N C Y 337 N C N 338 N O N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N N N 352 S C N 353 N C N 354 N O N 355 N C Y 356 N C Y 357 N C Y 358 N C Y 359 N C Y 360 N C Y 361 N C N 362 N O N 363 N O N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N N N 376 S C N 377 N C N 378 N O N 379 N C N 380 N C N 381 N C N 382 N O N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing Y 127 N sing Y 128 N doub Y 129 N doub N 130 N sing Y 131 N sing N 132 N sing Y 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N doub N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N doub N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N doub N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N doub N 247 N sing N 248 N sing N 249 N sing N 250 N sing Y 251 N doub Y 252 N sing Y 253 N sing N 254 N sing Y 255 N doub N 256 N sing Y 257 N doub N 258 N sing Y 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N doub N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N doub N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N doub N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N doub N 316 N sing N 317 N sing N 318 N sing N 319 N sing Y 320 N doub Y 321 N sing Y 322 N sing N 323 N sing Y 324 N doub Y 325 N sing Y 326 N sing N 327 N sing Y 328 N sing Y 329 N doub N 330 N sing Y 331 N doub N 332 N sing Y 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N doub N 344 N sing N 345 N sing N 346 N sing N 347 N sing Y 348 N doub Y 349 N sing Y 350 N sing N 351 N sing Y 352 N doub N 353 N sing Y 354 N doub N 355 N sing Y 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N doub N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing NE Antiviral Res. ARSRDR 1136 0166-3542 117 122 10.1016/J.ANTIVIRAL.2015.03.003 25766862 Enzymatic Synthesis of Acyclic Nucleoside Thiophosphonate Diphosphates: Effect of the Alpha-Phosphorus Configuration on HIV-1 RT Activity. 2015 10.2210/pdb4c6a/pdb pdb_00004c6a 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 MIRRORS CCD 2011-11-16 ADSC QUANTUM 315r SI SINGLE WAVELENGTH M x-ray 1 0.95373 1.0 PROXIMA 1 SOLEIL 0.95373 SYNCHROTRON SOLEIL BEAMLINE PROXIMA 1 16604.043 NUCLEOSIDE DIPHOSPHATE KINASE, CYTOSOLIC 2.7.4.6 YES 1 man polymer 106.120 DI(HYDROXYETHYL)ETHER 1 syn non-polymer 18.015 water 345 nat water NDK, NDP KINASE, NUCLEOSIDE DIPHOSPHATE KINASE no no STNKVNKERTFLAVKPDGVARGLVGEIIARYEKKGFVLVGLKQLVPTKDLAESHYAEHKERPFFGGLVSFITSGPVVAMV FEGKGVVASARLMIGVTNPLASAPGSIRGDFGVDVGRNIIGGSDSVESANREIALWFKPEELLTEVKPNPNLYE STNKVNKERTFLAVKPDGVARGLVGEIIARYEKKGFVLVGLKQLVPTKDLAESHYAEHKERPFFGGLVSFITSGPVVAMV FEGKGVVASARLMIGVTNPLASAPGSIRGDFGVDVGRNIIGGSDSVESANREIALWFKPEELLTEVKPNPNLYE A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample 44689 DICTYOSTELIUM DISCOIDEUM 511693 ESCHERICHIA COLI BL21 PETG20A PLASMID 1 1 49.9 NONE 7.5 26% PEG 1000, 100MM TRIS PH7.5 chem_comp_atom chem_comp_bond database_2 pdbx_database_status pdbx_initial_refinement_model pdbx_struct_special_symmetry struct_site repository Initial release Database references Database references Data collection Database references Derived calculations Other Refinement description 1 0 2013-11-20 1 1 2015-03-25 1 2 2015-04-22 1 3 2023-12-20 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.status_code_sf _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id PDBE Y PDBE 2013-09-18 REL REL 1 A O HOH 2027 6.80 1 A O HOH 2087 6.78 1 A O HOH 2136 7.18 1 A O HOH 2146 7.30 1 A O HOH 2179 6.01 1 A O HOH 2180 6.07 1 A O HOH 2345 6.42 PEG DI(HYDROXYETHYL)ETHER HOH water 3FKB PDB ENTRY 3FKB PDB experimental model PEG 1156 2 PEG PEG 1156 A HOH 2001 3 HOH HOH 2001 A HOH 2002 3 HOH HOH 2002 A HOH 2003 3 HOH HOH 2003 A HOH 2004 3 HOH HOH 2004 A HOH 2005 3 HOH HOH 2005 A HOH 2006 3 HOH HOH 2006 A HOH 2007 3 HOH HOH 2007 A HOH 2008 3 HOH HOH 2008 A HOH 2009 3 HOH HOH 2009 A HOH 2010 3 HOH HOH 2010 A HOH 2011 3 HOH HOH 2011 A HOH 2012 3 HOH HOH 2012 A HOH 2013 3 HOH HOH 2013 A HOH 2014 3 HOH HOH 2014 A HOH 2015 3 HOH HOH 2015 A HOH 2016 3 HOH HOH 2016 A HOH 2017 3 HOH HOH 2017 A HOH 2018 3 HOH HOH 2018 A HOH 2019 3 HOH HOH 2019 A HOH 2020 3 HOH HOH 2020 A HOH 2021 3 HOH HOH 2021 A HOH 2022 3 HOH HOH 2022 A HOH 2023 3 HOH HOH 2023 A HOH 2024 3 HOH HOH 2024 A HOH 2025 3 HOH HOH 2025 A HOH 2026 3 HOH HOH 2026 A HOH 2027 3 HOH HOH 2027 A HOH 2028 3 HOH HOH 2028 A HOH 2029 3 HOH HOH 2029 A HOH 2030 3 HOH HOH 2030 A HOH 2031 3 HOH HOH 2031 A HOH 2032 3 HOH HOH 2032 A HOH 2033 3 HOH HOH 2033 A HOH 2034 3 HOH HOH 2034 A HOH 2035 3 HOH HOH 2035 A HOH 2036 3 HOH HOH 2036 A HOH 2037 3 HOH HOH 2037 A HOH 2038 3 HOH HOH 2038 A HOH 2039 3 HOH HOH 2039 A HOH 2040 3 HOH HOH 2040 A HOH 2041 3 HOH HOH 2041 A HOH 2042 3 HOH HOH 2042 A HOH 2043 3 HOH HOH 2043 A HOH 2044 3 HOH HOH 2044 A HOH 2045 3 HOH HOH 2045 A HOH 2046 3 HOH HOH 2046 A HOH 2047 3 HOH HOH 2047 A HOH 2048 3 HOH HOH 2048 A HOH 2049 3 HOH HOH 2049 A HOH 2050 3 HOH HOH 2050 A HOH 2051 3 HOH HOH 2051 A HOH 2052 3 HOH HOH 2052 A HOH 2053 3 HOH HOH 2053 A HOH 2054 3 HOH HOH 2054 A HOH 2055 3 HOH HOH 2055 A HOH 2056 3 HOH HOH 2056 A HOH 2057 3 HOH HOH 2057 A HOH 2058 3 HOH HOH 2058 A HOH 2059 3 HOH HOH 2059 A HOH 2060 3 HOH HOH 2060 A HOH 2061 3 HOH HOH 2061 A HOH 2062 3 HOH HOH 2062 A HOH 2063 3 HOH HOH 2063 A HOH 2064 3 HOH HOH 2064 A HOH 2065 3 HOH HOH 2065 A HOH 2066 3 HOH HOH 2066 A HOH 2067 3 HOH HOH 2067 A HOH 2068 3 HOH HOH 2068 A HOH 2069 3 HOH HOH 2069 A HOH 2070 3 HOH HOH 2070 A HOH 2071 3 HOH HOH 2071 A HOH 2072 3 HOH HOH 2072 A HOH 2073 3 HOH HOH 2073 A HOH 2074 3 HOH HOH 2074 A HOH 2075 3 HOH HOH 2075 A HOH 2076 3 HOH HOH 2076 A HOH 2077 3 HOH HOH 2077 A HOH 2078 3 HOH HOH 2078 A HOH 2079 3 HOH HOH 2079 A HOH 2080 3 HOH HOH 2080 A HOH 2081 3 HOH HOH 2081 A HOH 2082 3 HOH HOH 2082 A HOH 2083 3 HOH HOH 2083 A HOH 2084 3 HOH HOH 2084 A HOH 2085 3 HOH HOH 2085 A HOH 2086 3 HOH HOH 2086 A HOH 2087 3 HOH HOH 2087 A HOH 2088 3 HOH HOH 2088 A HOH 2089 3 HOH HOH 2089 A HOH 2090 3 HOH HOH 2090 A HOH 2091 3 HOH HOH 2091 A HOH 2092 3 HOH HOH 2092 A HOH 2093 3 HOH HOH 2093 A HOH 2094 3 HOH HOH 2094 A HOH 2095 3 HOH HOH 2095 A HOH 2096 3 HOH HOH 2096 A HOH 2097 3 HOH HOH 2097 A HOH 2098 3 HOH HOH 2098 A HOH 2099 3 HOH HOH 2099 A HOH 2100 3 HOH HOH 2100 A HOH 2101 3 HOH HOH 2101 A HOH 2102 3 HOH HOH 2102 A HOH 2103 3 HOH HOH 2103 A HOH 2104 3 HOH HOH 2104 A HOH 2105 3 HOH HOH 2105 A HOH 2106 3 HOH HOH 2106 A HOH 2107 3 HOH HOH 2107 A HOH 2108 3 HOH HOH 2108 A HOH 2109 3 HOH HOH 2109 A HOH 2110 3 HOH HOH 2110 A HOH 2111 3 HOH HOH 2111 A HOH 2112 3 HOH HOH 2112 A HOH 2113 3 HOH HOH 2113 A HOH 2114 3 HOH HOH 2114 A HOH 2115 3 HOH HOH 2115 A HOH 2116 3 HOH HOH 2116 A HOH 2117 3 HOH HOH 2117 A HOH 2118 3 HOH HOH 2118 A HOH 2119 3 HOH HOH 2119 A HOH 2120 3 HOH HOH 2120 A HOH 2121 3 HOH HOH 2121 A HOH 2122 3 HOH HOH 2122 A HOH 2123 3 HOH HOH 2123 A HOH 2124 3 HOH HOH 2124 A HOH 2125 3 HOH HOH 2125 A HOH 2126 3 HOH HOH 2126 A HOH 2127 3 HOH HOH 2127 A HOH 2128 3 HOH HOH 2128 A HOH 2129 3 HOH HOH 2129 A HOH 2130 3 HOH HOH 2130 A HOH 2131 3 HOH HOH 2131 A HOH 2132 3 HOH HOH 2132 A HOH 2133 3 HOH HOH 2133 A HOH 2134 3 HOH HOH 2134 A HOH 2135 3 HOH HOH 2135 A HOH 2136 3 HOH HOH 2136 A HOH 2137 3 HOH HOH 2137 A HOH 2138 3 HOH HOH 2138 A HOH 2139 3 HOH HOH 2139 A HOH 2140 3 HOH HOH 2140 A HOH 2141 3 HOH HOH 2141 A HOH 2142 3 HOH HOH 2142 A HOH 2143 3 HOH HOH 2143 A HOH 2144 3 HOH HOH 2144 A HOH 2145 3 HOH HOH 2145 A HOH 2146 3 HOH HOH 2146 A HOH 2147 3 HOH HOH 2147 A HOH 2148 3 HOH HOH 2148 A HOH 2149 3 HOH HOH 2149 A HOH 2150 3 HOH HOH 2150 A HOH 2151 3 HOH HOH 2151 A HOH 2152 3 HOH HOH 2152 A HOH 2153 3 HOH HOH 2153 A HOH 2154 3 HOH HOH 2154 A HOH 2155 3 HOH HOH 2155 A HOH 2156 3 HOH HOH 2156 A HOH 2157 3 HOH HOH 2157 A HOH 2158 3 HOH HOH 2158 A HOH 2159 3 HOH HOH 2159 A HOH 2160 3 HOH HOH 2160 A HOH 2161 3 HOH HOH 2161 A HOH 2162 3 HOH HOH 2162 A HOH 2163 3 HOH HOH 2163 A HOH 2164 3 HOH HOH 2164 A HOH 2165 3 HOH HOH 2165 A HOH 2166 3 HOH HOH 2166 A HOH 2167 3 HOH HOH 2167 A HOH 2168 3 HOH HOH 2168 A HOH 2169 3 HOH HOH 2169 A HOH 2170 3 HOH HOH 2170 A HOH 2171 3 HOH HOH 2171 A HOH 2172 3 HOH HOH 2172 A HOH 2173 3 HOH HOH 2173 A HOH 2174 3 HOH HOH 2174 A HOH 2175 3 HOH HOH 2175 A HOH 2176 3 HOH HOH 2176 A HOH 2177 3 HOH HOH 2177 A HOH 2178 3 HOH HOH 2178 A HOH 2179 3 HOH HOH 2179 A HOH 2180 3 HOH HOH 2180 A HOH 2181 3 HOH HOH 2181 A HOH 2182 3 HOH HOH 2182 A HOH 2183 3 HOH HOH 2183 A HOH 2184 3 HOH HOH 2184 A HOH 2185 3 HOH HOH 2185 A HOH 2186 3 HOH HOH 2186 A HOH 2187 3 HOH HOH 2187 A HOH 2188 3 HOH HOH 2188 A HOH 2189 3 HOH HOH 2189 A HOH 2190 3 HOH HOH 2190 A HOH 2191 3 HOH HOH 2191 A HOH 2192 3 HOH HOH 2192 A HOH 2193 3 HOH HOH 2193 A HOH 2194 3 HOH HOH 2194 A HOH 2195 3 HOH HOH 2195 A HOH 2196 3 HOH HOH 2196 A HOH 2197 3 HOH HOH 2197 A HOH 2198 3 HOH HOH 2198 A HOH 2199 3 HOH HOH 2199 A HOH 2200 3 HOH HOH 2200 A HOH 2201 3 HOH HOH 2201 A HOH 2202 3 HOH HOH 2202 A HOH 2203 3 HOH HOH 2203 A HOH 2204 3 HOH HOH 2204 A HOH 2205 3 HOH HOH 2205 A HOH 2206 3 HOH HOH 2206 A HOH 2207 3 HOH HOH 2207 A HOH 2208 3 HOH HOH 2208 A HOH 2209 3 HOH HOH 2209 A HOH 2210 3 HOH HOH 2210 A HOH 2211 3 HOH HOH 2211 A HOH 2212 3 HOH HOH 2212 A HOH 2213 3 HOH HOH 2213 A HOH 2214 3 HOH HOH 2214 A HOH 2215 3 HOH HOH 2215 A HOH 2216 3 HOH HOH 2216 A HOH 2217 3 HOH HOH 2217 A HOH 2218 3 HOH HOH 2218 A HOH 2219 3 HOH HOH 2219 A HOH 2220 3 HOH HOH 2220 A HOH 2221 3 HOH HOH 2221 A HOH 2222 3 HOH HOH 2222 A HOH 2223 3 HOH HOH 2223 A HOH 2224 3 HOH HOH 2224 A HOH 2225 3 HOH HOH 2225 A HOH 2226 3 HOH HOH 2226 A HOH 2227 3 HOH HOH 2227 A HOH 2228 3 HOH HOH 2228 A HOH 2229 3 HOH HOH 2229 A HOH 2230 3 HOH HOH 2230 A HOH 2231 3 HOH HOH 2231 A HOH 2232 3 HOH HOH 2232 A HOH 2233 3 HOH HOH 2233 A HOH 2234 3 HOH HOH 2234 A HOH 2235 3 HOH HOH 2235 A HOH 2236 3 HOH HOH 2236 A HOH 2237 3 HOH HOH 2237 A HOH 2238 3 HOH HOH 2238 A HOH 2239 3 HOH HOH 2239 A HOH 2240 3 HOH HOH 2240 A HOH 2241 3 HOH HOH 2241 A HOH 2242 3 HOH HOH 2242 A HOH 2243 3 HOH HOH 2243 A HOH 2244 3 HOH HOH 2244 A HOH 2245 3 HOH HOH 2245 A HOH 2246 3 HOH HOH 2246 A HOH 2247 3 HOH HOH 2247 A HOH 2248 3 HOH HOH 2248 A HOH 2249 3 HOH HOH 2249 A HOH 2250 3 HOH HOH 2250 A HOH 2251 3 HOH HOH 2251 A HOH 2252 3 HOH HOH 2252 A HOH 2253 3 HOH HOH 2253 A HOH 2254 3 HOH HOH 2254 A HOH 2255 3 HOH HOH 2255 A HOH 2256 3 HOH HOH 2256 A HOH 2257 3 HOH HOH 2257 A HOH 2258 3 HOH HOH 2258 A HOH 2259 3 HOH HOH 2259 A HOH 2260 3 HOH HOH 2260 A HOH 2261 3 HOH HOH 2261 A HOH 2262 3 HOH HOH 2262 A HOH 2263 3 HOH HOH 2263 A HOH 2264 3 HOH HOH 2264 A HOH 2265 3 HOH HOH 2265 A HOH 2266 3 HOH HOH 2266 A HOH 2267 3 HOH HOH 2267 A HOH 2268 3 HOH HOH 2268 A HOH 2269 3 HOH HOH 2269 A HOH 2270 3 HOH HOH 2270 A HOH 2271 3 HOH HOH 2271 A HOH 2272 3 HOH HOH 2272 A HOH 2273 3 HOH HOH 2273 A HOH 2274 3 HOH HOH 2274 A HOH 2275 3 HOH HOH 2275 A HOH 2276 3 HOH HOH 2276 A HOH 2277 3 HOH HOH 2277 A HOH 2278 3 HOH HOH 2278 A HOH 2279 3 HOH HOH 2279 A HOH 2280 3 HOH HOH 2280 A HOH 2281 3 HOH HOH 2281 A HOH 2282 3 HOH HOH 2282 A HOH 2283 3 HOH HOH 2283 A HOH 2284 3 HOH HOH 2284 A HOH 2285 3 HOH HOH 2285 A HOH 2286 3 HOH HOH 2286 A HOH 2287 3 HOH HOH 2287 A HOH 2288 3 HOH HOH 2288 A HOH 2289 3 HOH HOH 2289 A HOH 2290 3 HOH HOH 2290 A HOH 2291 3 HOH HOH 2291 A HOH 2292 3 HOH HOH 2292 A HOH 2293 3 HOH HOH 2293 A HOH 2294 3 HOH HOH 2294 A HOH 2295 3 HOH HOH 2295 A HOH 2296 3 HOH HOH 2296 A HOH 2297 3 HOH HOH 2297 A HOH 2298 3 HOH HOH 2298 A HOH 2299 3 HOH HOH 2299 A HOH 2300 3 HOH HOH 2300 A HOH 2301 3 HOH HOH 2301 A HOH 2302 3 HOH HOH 2302 A HOH 2303 3 HOH HOH 2303 A HOH 2304 3 HOH HOH 2304 A HOH 2305 3 HOH HOH 2305 A HOH 2306 3 HOH HOH 2306 A HOH 2307 3 HOH HOH 2307 A HOH 2308 3 HOH HOH 2308 A HOH 2309 3 HOH HOH 2309 A HOH 2310 3 HOH HOH 2310 A HOH 2311 3 HOH HOH 2311 A HOH 2312 3 HOH HOH 2312 A HOH 2313 3 HOH HOH 2313 A HOH 2314 3 HOH HOH 2314 A HOH 2315 3 HOH HOH 2315 A HOH 2316 3 HOH HOH 2316 A HOH 2317 3 HOH HOH 2317 A HOH 2318 3 HOH HOH 2318 A HOH 2319 3 HOH HOH 2319 A HOH 2320 3 HOH HOH 2320 A HOH 2321 3 HOH HOH 2321 A HOH 2322 3 HOH HOH 2322 A HOH 2323 3 HOH HOH 2323 A HOH 2324 3 HOH HOH 2324 A HOH 2325 3 HOH HOH 2325 A HOH 2326 3 HOH HOH 2326 A HOH 2327 3 HOH HOH 2327 A HOH 2328 3 HOH HOH 2328 A HOH 2329 3 HOH HOH 2329 A HOH 2330 3 HOH HOH 2330 A HOH 2331 3 HOH HOH 2331 A HOH 2332 3 HOH HOH 2332 A HOH 2333 3 HOH HOH 2333 A HOH 2334 3 HOH HOH 2334 A HOH 2335 3 HOH HOH 2335 A HOH 2336 3 HOH HOH 2336 A HOH 2337 3 HOH HOH 2337 A HOH 2338 3 HOH HOH 2338 A HOH 2339 3 HOH HOH 2339 A HOH 2340 3 HOH HOH 2340 A HOH 2341 3 HOH HOH 2341 A HOH 2342 3 HOH HOH 2342 A HOH 2343 3 HOH HOH 2343 A HOH 2344 3 HOH HOH 2344 A HOH 2345 3 HOH HOH 2345 A n 1 2 A n 2 3 A n 3 4 A LYS 5 n 4 LYS 5 A VAL 6 n 5 VAL 6 A ASN 7 n 6 ASN 7 A LYS 8 n 7 LYS 8 A GLU 9 n 8 GLU 9 A ARG 10 n 9 ARG 10 A THR 11 n 10 THR 11 A PHE 12 n 11 PHE 12 A LEU 13 n 12 LEU 13 A ALA 14 n 13 ALA 14 A VAL 15 n 14 VAL 15 A LYS 16 n 15 LYS 16 A PRO 17 n 16 PRO 17 A ASP 18 n 17 ASP 18 A GLY 19 n 18 GLY 19 A VAL 20 n 19 VAL 20 A ALA 21 n 20 ALA 21 A ARG 22 n 21 ARG 22 A GLY 23 n 22 GLY 23 A LEU 24 n 23 LEU 24 A VAL 25 n 24 VAL 25 A GLY 26 n 25 GLY 26 A GLU 27 n 26 GLU 27 A ILE 28 n 27 ILE 28 A ILE 29 n 28 ILE 29 A ALA 30 n 29 ALA 30 A ARG 31 n 30 ARG 31 A TYR 32 n 31 TYR 32 A GLU 33 n 32 GLU 33 A LYS 34 n 33 LYS 34 A LYS 35 n 34 LYS 35 A GLY 36 n 35 GLY 36 A PHE 37 n 36 PHE 37 A VAL 38 n 37 VAL 38 A LEU 39 n 38 LEU 39 A VAL 40 n 39 VAL 40 A GLY 41 n 40 GLY 41 A LEU 42 n 41 LEU 42 A LYS 43 n 42 LYS 43 A GLN 44 n 43 GLN 44 A LEU 45 n 44 LEU 45 A VAL 46 n 45 VAL 46 A PRO 47 n 46 PRO 47 A THR 48 n 47 THR 48 A LYS 49 n 48 LYS 49 A ASP 50 n 49 ASP 50 A LEU 51 n 50 LEU 51 A ALA 52 n 51 ALA 52 A GLU 53 n 52 GLU 53 A SER 54 n 53 SER 54 A HIS 55 n 54 HIS 55 A TYR 56 n 55 TYR 56 A ALA 57 n 56 ALA 57 A GLU 58 n 57 GLU 58 A HIS 59 n 58 HIS 59 A LYS 60 n 59 LYS 60 A GLU 61 n 60 GLU 61 A ARG 62 n 61 ARG 62 A PRO 63 n 62 PRO 63 A PHE 64 n 63 PHE 64 A PHE 65 n 64 PHE 65 A GLY 66 n 65 GLY 66 A GLY 67 n 66 GLY 67 A LEU 68 n 67 LEU 68 A VAL 69 n 68 VAL 69 A SER 70 n 69 SER 70 A PHE 71 n 70 PHE 71 A ILE 72 n 71 ILE 72 A THR 73 n 72 THR 73 A SER 74 n 73 SER 74 A GLY 75 n 74 GLY 75 A PRO 76 n 75 PRO 76 A VAL 77 n 76 VAL 77 A VAL 78 n 77 VAL 78 A ALA 79 n 78 ALA 79 A MET 80 n 79 MET 80 A VAL 81 n 80 VAL 81 A PHE 82 n 81 PHE 82 A GLU 83 n 82 GLU 83 A GLY 84 n 83 GLY 84 A LYS 85 n 84 LYS 85 A GLY 86 n 85 GLY 86 A VAL 87 n 86 VAL 87 A VAL 88 n 87 VAL 88 A ALA 89 n 88 ALA 89 A SER 90 n 89 SER 90 A ALA 91 n 90 ALA 91 A ARG 92 n 91 ARG 92 A LEU 93 n 92 LEU 93 A MET 94 n 93 MET 94 A ILE 95 n 94 ILE 95 A GLY 96 n 95 GLY 96 A VAL 97 n 96 VAL 97 A THR 98 n 97 THR 98 A ASN 99 n 98 ASN 99 A PRO 100 n 99 PRO 100 A LEU 101 n 100 LEU 101 A ALA 102 n 101 ALA 102 A SER 103 n 102 SER 103 A ALA 104 n 103 ALA 104 A PRO 105 n 104 PRO 105 A GLY 106 n 105 GLY 106 A SER 107 n 106 SER 107 A ILE 108 n 107 ILE 108 A ARG 109 n 108 ARG 109 A GLY 110 n 109 GLY 110 A ASP 111 n 110 ASP 111 A PHE 112 n 111 PHE 112 A GLY 113 n 112 GLY 113 A VAL 114 n 113 VAL 114 A ASP 115 n 114 ASP 115 A VAL 116 n 115 VAL 116 A GLY 117 n 116 GLY 117 A ARG 118 n 117 ARG 118 A ASN 119 n 118 ASN 119 A ILE 120 n 119 ILE 120 A ILE 121 n 120 ILE 121 A GLY 122 n 121 GLY 122 A GLY 123 n 122 GLY 123 A SER 124 n 123 SER 124 A ASP 125 n 124 ASP 125 A SER 126 n 125 SER 126 A VAL 127 n 126 VAL 127 A GLU 128 n 127 GLU 128 A SER 129 n 128 SER 129 A ALA 130 n 129 ALA 130 A ASN 131 n 130 ASN 131 A ARG 132 n 131 ARG 132 A GLU 133 n 132 GLU 133 A ILE 134 n 133 ILE 134 A ALA 135 n 134 ALA 135 A LEU 136 n 135 LEU 136 A TRP 137 n 136 TRP 137 A PHE 138 n 137 PHE 138 A LYS 139 n 138 LYS 139 A PRO 140 n 139 PRO 140 A GLU 141 n 140 GLU 141 A GLU 142 n 141 GLU 142 A LEU 143 n 142 LEU 143 A LEU 144 n 143 LEU 144 A THR 145 n 144 THR 145 A GLU 146 n 145 GLU 146 A VAL 147 n 146 VAL 147 A LYS 148 n 147 LYS 148 A PRO 149 n 148 PRO 149 A ASN 150 n 149 ASN 150 A PRO 151 n 150 PRO 151 A ASN 152 n 151 ASN 152 A LEU 153 n 152 LEU 153 A TYR 154 n 153 TYR 154 A GLU 155 n 154 GLU 155 A 0.2653 0.0579 0.0168 0.1692 -0.0366 0.1043 0.0084 0.0073 0.0208 -0.0323 0.0067 0.0093 0.0114 -0.0273 -0.0152 -0.0041 -0.0002 -0.0039 -0.0049 0.0020 -0.0109 refined -53.3199 29.2379 121.2900 X-RAY DIFFRACTION X-RAY DIFFRACTION 1 CHAIN A software_defined_assembly PQS 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N LEU 45 A N LEU 44 A O VAL 77 A O VAL 76 A N PHE 82 A N PHE 81 A O THR 11 A O THR 10 A N ALA 14 A N ALA 13 A O GLY 122 A O GLY 121 1 A HOH 2092 C HOH 1 A HOH 2152 C HOH 1 A HOH 2156 C HOH 1 A HOH 2312 C HOH 1 A SER 2 A SER 1 1 Y 1 A THR 3 A THR 2 1 Y 1 A ASN 4 A ASN 3 1 Y 1 A A OD2 O ASP HOH 50 2173 1.94 B 1 A A CG O LYS HOH 5 2012 2.17 B 1 A A CA C LYS LYS 5 5 0.165 0.026 1.525 1.690 B N 1 A A CD OE1 GLU GLU 142 142 -0.112 0.011 1.252 1.140 B B N 1 A A CA C LYS LYS 148 148 0.174 0.026 1.525 1.699 B N 1 A ILE 120 74.02 -51.43 14.69 -0.9188 0.0000 0.0000 -0.9188 0.0000 1.8377 0.9522 0.9555 0.1721 0.1633 0.1638 1.25 26.84 2286 45316 5.04 99.64 0.040 RANDOM 1 THROUGHOUT 0.0 MOLECULAR REPLACEMENT 0.045 0.043 0.039 PDB ENTRY 3FKB 0.115 1.25 26.84 345 1502 7 0 1150 0.010 1179 HARMONIC 2.00 1.05 1591 HARMONIC 2.00 410 SINUSOIDAL 2.00 26 HARMONIC 2.00 172 HARMONIC 5.00 1179 HARMONIC 20.00 4.70 13.92 147 SEMIHARMONIC 5.00 1753 SEMIHARMONIC 4.00 0.1712 0.1565 0.1572 1.28 171 3073 3244 20 5.27 99.64 9.73 1.25 26.84 4C6A 45344 -3.0 0.07 1 46.10 21 99.7 0.75 1.25 1.28 10.60 1 20 98.9 refinement BUSTER 2.11.4 data reduction XDS data scaling SCALA phasing PHASER High Resolution Structure of the Nucleoside diphosphate kinase 1 N N 2 N N 3 N N A LYS 5 A LYS 4 HELX_P A LYS 8 A LYS 7 5 1 4 A LYS 16 A LYS 15 HELX_P A ARG 22 A ARG 21 1 2 7 A LEU 24 A LEU 23 HELX_P A GLY 36 A GLY 35 1 3 13 A THR 48 A THR 47 HELX_P A TYR 56 A TYR 55 1 4 9 A ALA 57 A ALA 56 HELX_P A LYS 60 A LYS 59 5 5 4 A PHE 64 A PHE 63 HELX_P A THR 73 A THR 72 1 6 10 A GLY 86 A GLY 85 HELX_P A GLY 96 A GLY 95 1 7 11 A ASN 99 A ASN 98 HELX_P A SER 103 A SER 102 5 8 5 A SER 107 A SER 106 HELX_P A GLY 113 A GLY 112 1 9 7 A SER 126 A SER 125 HELX_P A PHE 138 A PHE 137 1 10 13 A LYS 139 A LYS 138 HELX_P A LEU 143 A LEU 142 5 11 5 TRANSFERASE TRANSFERASE, PHOSPHOTRANSFERASE NDKC_DICDI UNP 1 P22887 2 155 4C6A 2 155 P22887 A 1 1 154 1 HIS engineered mutation GLY 122 4C6A A P22887 UNP 122 121 4 anti-parallel anti-parallel anti-parallel A VAL 38 A VAL 37 A LEU 45 A LEU 44 A VAL 77 A VAL 76 A GLU 83 A GLU 82 A ARG 10 A ARG 9 A VAL 15 A VAL 14 A ILE 121 A ILE 120 A GLY 123 A GLY 122 BINDING SITE FOR RESIDUE PEG A 1156 A PEG 1156 Software 4 A ASN 99 A ASN 98 4 1_555 A HOH 2340 C HOH 4 1_555 A HOH 2341 C HOH 4 1_555 A HOH 2343 C HOH 4 1_555 182 P 63 2 2