0.007913 0.000000 0.000000 0.000000 0.007913 0.000000 0.000000 0.000000 0.007913 0.00000 0.00000 0.00000 Otero, J.M. Llamas-Saiz, A.L. Lamb, H. Hawkins, A.R. Blanco, B. Sedes, A. Peon, A. Gonzalez-Bello, C. van Raaij, M.J. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 48 90.00 90.00 90.00 126.380 126.380 126.380 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking Na 1 22.990 SODIUM ION non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking O4 S -2 96.063 SULFATE ION non-polymer C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking C9 H14 O6 218.204 (1R,4R,5R)-1,4,5-trihydroxy-3-(2-hydroxy)ethylcyclohex-2-ene-1-carboxylic acid non-polymer N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N NA N 231 N N N 232 S C N 233 N C N 234 N O N 235 N C Y 236 N C Y 237 N C Y 238 N C Y 239 N C Y 240 N C Y 241 N C N 242 N O N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N N N 255 S C N 256 N C N 257 N O N 258 N C N 259 N C N 260 N C N 261 N O N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N N N 272 S C N 273 N C N 274 N O N 275 N C N 276 N O N 277 N O N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N S N 286 N O N 287 N O N 288 N O N 289 N O N 290 N N N 291 S C N 292 N C N 293 N O N 294 R C N 295 N O N 296 N C N 297 N O N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N N N 308 S C N 309 N C N 310 N O N 311 N C Y 312 N C Y 313 N C Y 314 N C Y 315 N N Y 316 N C Y 317 N C Y 318 N C Y 319 N C Y 320 N C N 321 N O N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N N N 335 S C N 336 N C N 337 N O N 338 N C Y 339 N C Y 340 N C Y 341 N C Y 342 N C Y 343 N C Y 344 N C N 345 N O N 346 N O N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N N N 359 S C N 360 N C N 361 N O N 362 N C N 363 N C N 364 N C N 365 N O N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N O N 378 R C N 379 R C N 380 N O N 381 N C N 382 R C N 383 N C N 384 N O N 385 N O N 386 N O N 387 N C N 388 N C N 389 N C N 390 N C N 391 N O N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing Y 229 N doub Y 230 N sing Y 231 N sing N 232 N sing Y 233 N doub N 234 N sing Y 235 N doub N 236 N sing Y 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N doub N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N doub N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N doub N 272 N doub N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N doub N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N doub N 298 N sing N 299 N sing N 300 N sing N 301 N sing Y 302 N doub Y 303 N sing Y 304 N sing N 305 N sing Y 306 N doub Y 307 N sing Y 308 N sing N 309 N sing Y 310 N sing Y 311 N doub N 312 N sing Y 313 N doub N 314 N sing Y 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N doub N 326 N sing N 327 N sing N 328 N sing N 329 N sing Y 330 N doub Y 331 N sing Y 332 N sing N 333 N sing Y 334 N doub N 335 N sing Y 336 N doub N 337 N sing Y 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N doub N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N doub N 371 N sing N 372 N doub N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing US J. Med. Chem. JMCMAR 0151 1520-4804 57 3494 3510 10.1021/jm500175z 24689821 Exploring the water-binding pocket of the type II dehydroquinase enzyme in the structure-based design of inhibitors. 2014 10.2210/pdb4ciw/pdb pdb_00004ciw 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 PLANE-ELLIPSOIDAL MIRRORS (SI, RH, IR) PIXEL 2013-02-08 DECTRIS PILATUS 6M CHANNEL-CUT DOUBLE CRYSTAL MONOCHROMATOR SINGLE WAVELENGTH M x-ray 1 1.00614 1.0 XALOC ALBA 1.00614 SYNCHROTRON ALBA BEAMLINE XALOC 15676.737 3-DEHYDROQUINATE DEHYDRATASE 4.2.1.10 1 man polymer 96.063 SULFATE ION 1 syn non-polymer 22.990 SODIUM ION 3 syn non-polymer 218.204 (1R,4R,5R)-1,4,5-trihydroxy-3-(2-hydroxy)ethylcyclohex-2-ene-1-carboxylic acid 1 syn non-polymer 18.015 water 81 nat water 3-DEHYDROQUINASE, TYPE II DHQASE no no SELIVNVINGPNLGRLGRREPAVYGGTTHDELVALIEREAAELGLKAVVRQSDSEAQLLDWIHQAADAAEPVILNAGGLT HTSVALRDACAELSAPLIEVHISNVHAREEFRRHSYLSPIATGVIVGLGIQGYLLALRYLAEHVGT SELIVNVINGPNLGRLGRREPAVYGGTTHDELVALIEREAAELGLKAVVRQSDSEAQLLDWIHQAADAAEPVILNAGGLT HTSVALRDACAELSAPLIEVHISNVHAREEFRRHSYLSPIATGVIVGLGIQGYLLALRYLAEHVGT A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample 27294 1773 MYCOBACTERIUM TUBERCULOSIS 83333 ESCHERICHIA COLI K-12 SK3430 PLASMID PKK233-2 1 2.8 56 NONE 7.5 32% (V/V) 2-METHYL-2, 4-PENTANEDIOL, 0.3 M AMMONIUM SULFATE, 0.1 M 4-(2-HYDROXYETHYL)-PIPERAZINE-1-ETHANESULFONIC ACID SODIUM SALT (HEPES) PH 7.5 citation citation_author chem_comp_atom chem_comp_bond database_2 pdbx_database_status pdbx_initial_refinement_model pdbx_struct_conn_angle struct_conn struct_site repository Initial release Database references Database references Data collection Database references Derived calculations Other Refinement description 1 0 2014-04-16 1 1 2014-05-07 1 2 2018-01-24 1 3 2023-12-20 _citation.journal_abbrev _citation.journal_id_ISSN _citation.page_last _citation.pdbx_database_id_DOI _citation.title _citation_author.name _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.status_code_sf _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS TYPE 2 DEHYDROQUINASE IN COMPLEX WITH (1R,4S,5R)-1,4,5- TRIHYDROXY-3-HYDROXYMETHYLCYCLOHEX-2-ENE-1-CARBOXYLIC ACID CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS TYPE 2 DEHYDROQUINASE IN COMPLEX WITH(1R,4R,5R)-1,4,5- TRIHYDROXY-3-((1S)-1-HYDROXY-2-PHENYL)ETHYLCYCLOHEX-2 -EN-1-CARBOXYLIC ACID CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS TYPE 2 DEHYDROQUINASE IN COMPLEX WITH (1R,4R,5R)-1,4,5- TRIHYDROXY-3-((1R)-1-HYDROXY-2-PHENYL)ETHYLCYCLOHEX-2 -EN-1-CARBOXYLIC ACID PDBE Y PDBE 2013-12-17 REL REL SO4 SULFATE ION NA SODIUM ION XH2 (1R,4R,5R)-1,4,5-trihydroxy-3-(2-hydroxy)ethylcyclohex-2-ene-1-carboxylic acid HOH water 2Y71 PDB ENTRY 2Y71 PDB experimental model SO4 1144 2 SO4 SO4 1144 A NA 1145 3 NA NA 1145 A NA 1146 3 NA NA 1146 A NA 1147 3 NA NA 1147 A XH2 1148 4 XH2 XH2 1148 A HOH 2001 5 HOH HOH 2001 A HOH 2002 5 HOH HOH 2002 A HOH 2003 5 HOH HOH 2003 A HOH 2004 5 HOH HOH 2004 A HOH 2005 5 HOH HOH 2005 A HOH 2006 5 HOH HOH 2006 A HOH 2007 5 HOH HOH 2007 A HOH 2008 5 HOH HOH 2008 A HOH 2009 5 HOH HOH 2009 A HOH 2010 5 HOH HOH 2010 A HOH 2011 5 HOH HOH 2011 A HOH 2012 5 HOH HOH 2012 A HOH 2013 5 HOH HOH 2013 A HOH 2014 5 HOH HOH 2014 A HOH 2015 5 HOH HOH 2015 A HOH 2016 5 HOH HOH 2016 A HOH 2017 5 HOH HOH 2017 A HOH 2018 5 HOH HOH 2018 A HOH 2019 5 HOH HOH 2019 A HOH 2020 5 HOH HOH 2020 A HOH 2021 5 HOH HOH 2021 A HOH 2022 5 HOH HOH 2022 A HOH 2023 5 HOH HOH 2023 A HOH 2024 5 HOH HOH 2024 A HOH 2025 5 HOH HOH 2025 A HOH 2026 5 HOH HOH 2026 A HOH 2027 5 HOH HOH 2027 A HOH 2028 5 HOH HOH 2028 A HOH 2029 5 HOH HOH 2029 A HOH 2030 5 HOH HOH 2030 A HOH 2031 5 HOH HOH 2031 A HOH 2032 5 HOH HOH 2032 A HOH 2033 5 HOH HOH 2033 A HOH 2034 5 HOH HOH 2034 A HOH 2035 5 HOH HOH 2035 A HOH 2036 5 HOH HOH 2036 A HOH 2037 5 HOH HOH 2037 A HOH 2038 5 HOH HOH 2038 A HOH 2039 5 HOH HOH 2039 A HOH 2040 5 HOH HOH 2040 A HOH 2041 5 HOH HOH 2041 A HOH 2042 5 HOH HOH 2042 A HOH 2043 5 HOH HOH 2043 A HOH 2044 5 HOH HOH 2044 A HOH 2045 5 HOH HOH 2045 A HOH 2046 5 HOH HOH 2046 A HOH 2047 5 HOH HOH 2047 A HOH 2048 5 HOH HOH 2048 A HOH 2049 5 HOH HOH 2049 A HOH 2050 5 HOH HOH 2050 A HOH 2051 5 HOH HOH 2051 A HOH 2052 5 HOH HOH 2052 A HOH 2053 5 HOH HOH 2053 A HOH 2054 5 HOH HOH 2054 A HOH 2055 5 HOH HOH 2055 A HOH 2056 5 HOH HOH 2056 A HOH 2057 5 HOH HOH 2057 A HOH 2058 5 HOH HOH 2058 A HOH 2059 5 HOH HOH 2059 A HOH 2060 5 HOH HOH 2060 A HOH 2061 5 HOH HOH 2061 A HOH 2062 5 HOH HOH 2062 A HOH 2063 5 HOH HOH 2063 A HOH 2064 5 HOH HOH 2064 A HOH 2065 5 HOH HOH 2065 A HOH 2066 5 HOH HOH 2066 A HOH 2067 5 HOH HOH 2067 A HOH 2068 5 HOH HOH 2068 A HOH 2069 5 HOH HOH 2069 A HOH 2070 5 HOH HOH 2070 A HOH 2071 5 HOH HOH 2071 A HOH 2072 5 HOH HOH 2072 A HOH 2073 5 HOH HOH 2073 A HOH 2074 5 HOH HOH 2074 A HOH 2075 5 HOH HOH 2075 A HOH 2076 5 HOH HOH 2076 A HOH 2077 5 HOH HOH 2077 A HOH 2078 5 HOH HOH 2078 A HOH 2079 5 HOH HOH 2079 A HOH 2080 5 HOH HOH 2080 A HOH 2081 5 HOH HOH 2081 A n 1 1 A n 2 2 A LEU 3 n 3 LEU 3 A ILE 4 n 4 ILE 4 A VAL 5 n 5 VAL 5 A ASN 6 n 6 ASN 6 A VAL 7 n 7 VAL 7 A ILE 8 n 8 ILE 8 A ASN 9 n 9 ASN 9 A GLY 10 n 10 GLY 10 A PRO 11 n 11 PRO 11 A ASN 12 n 12 ASN 12 A LEU 13 n 13 LEU 13 A GLY 14 n 14 GLY 14 A ARG 15 n 15 ARG 15 A LEU 16 n 16 LEU 16 A GLY 17 n 17 GLY 17 A ARG 18 n 18 ARG 18 A ARG 19 n 19 ARG 19 A GLU 20 n 20 GLU 20 A PRO 21 n 21 PRO 21 A ALA 22 n 22 ALA 22 A VAL 23 n 23 VAL 23 A TYR 24 n 24 TYR 24 A GLY 25 n 25 GLY 25 A GLY 26 n 26 GLY 26 A THR 27 n 27 THR 27 A THR 28 n 28 THR 28 A HIS 29 n 29 HIS 29 A ASP 30 n 30 ASP 30 A GLU 31 n 31 GLU 31 A LEU 32 n 32 LEU 32 A VAL 33 n 33 VAL 33 A ALA 34 n 34 ALA 34 A LEU 35 n 35 LEU 35 A ILE 36 n 36 ILE 36 A GLU 37 n 37 GLU 37 A ARG 38 n 38 ARG 38 A GLU 39 n 39 GLU 39 A ALA 40 n 40 ALA 40 A ALA 41 n 41 ALA 41 A GLU 42 n 42 GLU 42 A LEU 43 n 43 LEU 43 A GLY 44 n 44 GLY 44 A LEU 45 n 45 LEU 45 A LYS 46 n 46 LYS 46 A ALA 47 n 47 ALA 47 A VAL 48 n 48 VAL 48 A VAL 49 n 49 VAL 49 A ARG 50 n 50 ARG 50 A GLN 51 n 51 GLN 51 A SER 52 n 52 SER 52 A ASP 53 n 53 ASP 53 A SER 54 n 54 SER 54 A GLU 55 n 55 GLU 55 A ALA 56 n 56 ALA 56 A GLN 57 n 57 GLN 57 A LEU 58 n 58 LEU 58 A LEU 59 n 59 LEU 59 A ASP 60 n 60 ASP 60 A TRP 61 n 61 TRP 61 A ILE 62 n 62 ILE 62 A HIS 63 n 63 HIS 63 A GLN 64 n 64 GLN 64 A ALA 65 n 65 ALA 65 A ALA 66 n 66 ALA 66 A ASP 67 n 67 ASP 67 A ALA 68 n 68 ALA 68 A ALA 69 n 69 ALA 69 A GLU 70 n 70 GLU 70 A PRO 71 n 71 PRO 71 A VAL 72 n 72 VAL 72 A ILE 73 n 73 ILE 73 A LEU 74 n 74 LEU 74 A ASN 75 n 75 ASN 75 A ALA 76 n 76 ALA 76 A GLY 77 n 77 GLY 77 A GLY 78 n 78 GLY 78 A LEU 79 n 79 LEU 79 A THR 80 n 80 THR 80 A HIS 81 n 81 HIS 81 A THR 82 n 82 THR 82 A SER 83 n 83 SER 83 A VAL 84 n 84 VAL 84 A ALA 85 n 85 ALA 85 A LEU 86 n 86 LEU 86 A ARG 87 n 87 ARG 87 A ASP 88 n 88 ASP 88 A ALA 89 n 89 ALA 89 A CYS 90 n 90 CYS 90 A ALA 91 n 91 ALA 91 A GLU 92 n 92 GLU 92 A LEU 93 n 93 LEU 93 A SER 94 n 94 SER 94 A ALA 95 n 95 ALA 95 A PRO 96 n 96 PRO 96 A LEU 97 n 97 LEU 97 A ILE 98 n 98 ILE 98 A GLU 99 n 99 GLU 99 A VAL 100 n 100 VAL 100 A HIS 101 n 101 HIS 101 A ILE 102 n 102 ILE 102 A SER 103 n 103 SER 103 A ASN 104 n 104 ASN 104 A VAL 105 n 105 VAL 105 A HIS 106 n 106 HIS 106 A ALA 107 n 107 ALA 107 A ARG 108 n 108 ARG 108 A GLU 109 n 109 GLU 109 A GLU 110 n 110 GLU 110 A PHE 111 n 111 PHE 111 A ARG 112 n 112 ARG 112 A ARG 113 n 113 ARG 113 A HIS 114 n 114 HIS 114 A SER 115 n 115 SER 115 A TYR 116 n 116 TYR 116 A LEU 117 n 117 LEU 117 A SER 118 n 118 SER 118 A PRO 119 n 119 PRO 119 A ILE 120 n 120 ILE 120 A ALA 121 n 121 ALA 121 A THR 122 n 122 THR 122 A GLY 123 n 123 GLY 123 A VAL 124 n 124 VAL 124 A ILE 125 n 125 ILE 125 A VAL 126 n 126 VAL 126 A GLY 127 n 127 GLY 127 A LEU 128 n 128 LEU 128 A GLY 129 n 129 GLY 129 A ILE 130 n 130 ILE 130 A GLN 131 n 131 GLN 131 A GLY 132 n 132 GLY 132 A TYR 133 n 133 TYR 133 A LEU 134 n 134 LEU 134 A LEU 135 n 135 LEU 135 A ALA 136 n 136 ALA 136 A LEU 137 n 137 LEU 137 A ARG 138 n 138 ARG 138 A TYR 139 n 139 TYR 139 A LEU 140 n 140 LEU 140 A ALA 141 n 141 ALA 141 A GLU 142 n 142 GLU 142 A HIS 143 n 143 HIS 143 A n 144 144 A n 145 145 A n 146 146 A author_and_software_defined_assembly PQS 12 dodecameric 30740 -89.1 68480 A ASN 6 A OD1 ASN 6 1_555 A NA 1145 C NA NA 1_555 A GLU 70 A OE1 GLU 70 1_555 81.1 A ASN 6 A OD1 ASN 6 1_555 A NA 1145 C NA NA 1_555 A HOH 2024 G O HOH 1_555 95.8 A GLU 70 A OE1 GLU 70 1_555 A NA 1145 C NA NA 1_555 A HOH 2024 G O HOH 1_555 121.4 A ASN 6 A OD1 ASN 6 1_555 A NA 1145 C NA NA 1_555 A HOH 2038 G O HOH 1_555 84.2 A GLU 70 A OE1 GLU 70 1_555 A NA 1145 C NA NA 1_555 A HOH 2038 G O HOH 1_555 54.1 A HOH 2024 G O HOH 1_555 A NA 1145 C NA NA 1_555 A HOH 2038 G O HOH 1_555 67.3 A ASN 6 A OD1 ASN 6 1_555 A NA 1145 C NA NA 1_555 A HOH 2080 G O HOH 1_555 151.4 A GLU 70 A OE1 GLU 70 1_555 A NA 1145 C NA NA 1_555 A HOH 2080 G O HOH 1_555 112.1 A HOH 2024 G O HOH 1_555 A NA 1145 C NA NA 1_555 A HOH 2080 G O HOH 1_555 98.0 A HOH 2038 G O HOH 1_555 A NA 1145 C NA NA 1_555 A HOH 2080 G O HOH 1_555 124.4 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 -1.0000000000 0.0000000000 0.0000000000 10_555 -y,z,-x crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 6_555 z,-x,-y crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 2_555 -x,-y,z crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 5_555 z,x,y crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 3_555 -x,y,-z crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 1.0000000000 0.0000000000 0.0000000000 12_555 -y,-z,x crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 4_555 x,-y,-z crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1.0000000000 0.0000000000 0.0000000000 9_555 y,z,x crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 7_555 -z,-x,y crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 -1.0000000000 0.0000000000 0.0000000000 11_555 y,-z,-x crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 8_555 -z,x,-y crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 A N VAL 48 A N VAL 48 A O VAL 5 A O VAL 5 A N ILE 8 A N ILE 8 A O ILE 73 A O ILE 73 A N LEU 74 A N LEU 74 A O ILE 98 A O ILE 98 A N GLU 99 A N GLU 99 A O GLY 123 A O GLY 123 1 A SO4 1144 B SO4 1 A HOH 2011 G HOH 1 A HOH 2050 G HOH 1 A HOH 2061 G HOH 1 A HOH 2074 G HOH 1 A SER 1 A SER 1 1 Y 1 A GLU 2 A GLU 2 1 Y 1 A VAL 144 A VAL 144 1 Y 1 A GLY 145 A GLY 145 1 Y 1 A THR 146 A THR 146 1 Y 1 A ASN 12 77.41 -4.33 1 A ARG 108 -120.03 -149.68 23.361 0.00 0.00 0.00 0.00 0.00 0.00 0.963 0.924 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. U VALUES ARE REFINED INDIVIDUALLY. INHIBITOR INCLUDED IN ENZYME ACTIVE SITE BY SOAKING OF APO- CRYSTALS IN INHIBITOR SOLUTION 0.19227 0.14177 0.14416 2.20 38.13 409 8152 4.8 99.11 4.383 0.112 RANDOM 1 THROUGHOUT MOLECULAR REPLACEMENT 0.189 0.165 0.80 0.80 1.20 PDB ENTRY 2Y71 MAXIMUM LIKELIHOOD MASK 2.20 38.13 81 1175 23 0 1071 0.013 0.019 1127 0.003 0.020 1108 1.517 1.979 1540 0.896 3.003 2533 6.222 5.000 142 32.459 23.529 51 12.727 15.000 181 13.328 15.000 10 0.087 0.200 186 0.006 0.021 1274 0.001 0.020 252 0.263 0.200 284 0.178 0.200 1047 0.170 0.200 547 0.083 0.200 668 0.200 0.200 25 0.070 0.200 1 0.342 0.200 25 0.210 0.200 46 0.171 0.200 9 1.955 2.322 1127 0.362 2.319 1108 3.193 3.436 1539 4.770 23.345 1965 1.514 3.461 2533 0.296 0.181 2.319 72 1122 10 95.06 17.7 2.20 38.11 4CIW 8562 -3.0 0.09 1 11.00 4.3 99.2 0.25 2.20 2.32 3.80 1 2.6 95.4 refinement REFMAC 5.7.0029 data reduction XDS data scaling SCALE phasing MOLREP Crystal structure of Mycobacterium tuberculosis type 2 dehydroquinase in complex with (1R,4R,5R)-1,4,5-trihydroxy-3-(2-hydroxy)ethylcyclohex-2-ene-1-carboxylic acid 1 N N 2 N N 3 N N 3 N N 3 N N 4 N N 5 N N A ASN 12 A ASN 12 HELX_P A LEU 16 A LEU 16 5 1 5 A GLU 20 A GLU 20 HELX_P A GLY 25 A GLY 25 1 2 6 A THR 28 A THR 28 HELX_P A LEU 43 A LEU 43 1 3 16 A SER 54 A SER 54 HELX_P A ALA 69 A ALA 69 1 4 16 A ALA 76 A ALA 76 HELX_P A THR 82 A THR 82 5 5 7 A SER 83 A SER 83 HELX_P A ALA 91 A ALA 91 1 6 9 A ASN 104 A ASN 104 HELX_P A ARG 108 A ARG 108 5 7 5 A GLU 109 A GLU 109 HELX_P A HIS 114 A HIS 114 5 8 6 A LEU 117 A LEU 117 HELX_P A ALA 121 A ALA 121 5 9 5 A ILE 130 A ILE 130 HELX_P A HIS 143 A HIS 143 1 10 14 metalc 2.751 A ASN 6 A OD1 ASN 6 1_555 A NA 1145 C NA NA 1_555 metalc 2.814 A GLU 70 A OE1 GLU 70 1_555 A NA 1145 C NA NA 1_555 metalc 3.037 A LEU 128 A O LEU 128 1_555 A NA 1146 D NA NA 1_555 metalc 2.541 A NA 1145 C NA NA 1_555 A HOH 2024 G O HOH 1_555 metalc 3.022 A NA 1145 C NA NA 1_555 A HOH 2038 G O HOH 1_555 metalc 2.742 A NA 1145 C NA NA 1_555 A HOH 2080 G O HOH 1_555 metalc 3.080 A NA 1147 E NA NA 1_555 A HOH 2051 G O HOH 1_555 LYASE BACTERIAL PROTEINS, LYASE, INHIBITOR, PROTEIN BINDING, SHIKIMIS ACID PATHWAY, SUBSTRATE SPECIFICITY AROQ_MYCTU UNP 1 P0A4Z6 2 147 4CIW 1 146 P0A4Z6 A 1 1 146 5 parallel parallel parallel parallel A LYS 46 A LYS 46 A GLN 51 A GLN 51 A ILE 4 A ILE 4 A ASN 9 A ASN 9 A VAL 72 A VAL 72 A ASN 75 A ASN 75 A LEU 97 A LEU 97 A HIS 101 A HIS 101 A GLY 123 A GLY 123 A VAL 126 A VAL 126 BINDING SITE FOR RESIDUE SO4 A 1144 A SO4 1144 Software 8 BINDING SITE FOR RESIDUE NA A 1145 A NA 1145 Software 5 BINDING SITE FOR RESIDUE NA A 1146 A NA 1146 Software 3 BINDING SITE FOR RESIDUE NA A 1147 A NA 1147 Software 4 BINDING SITE FOR RESIDUE XH2 A 1148 A XH2 1148 Software 11 A SER 54 A SER 54 8 9_555 A SER 54 A SER 54 8 1_555 A SER 54 A SER 54 8 5_555 A HOH 2032 G HOH 8 5_555 A HOH 2032 G HOH 8 9_555 A HOH 2078 G HOH 8 9_555 A HOH 2078 G HOH 8 5_555 A HOH 2078 G HOH 8 1_555 A ASN 6 A ASN 6 5 1_555 A GLU 70 A GLU 70 5 1_555 A HOH 2024 G HOH 5 1_555 A HOH 2038 G HOH 5 1_555 A HOH 2080 G HOH 5 1_555 A LEU 128 A LEU 128 3 1_555 A ILE 130 A ILE 130 3 1_555 A GLN 131 A GLN 131 3 1_555 A ARG 87 A ARG 87 4 1_555 A ARG 113 A ARG 113 4 2_555 A HIS 114 A HIS 114 4 1_555 A HOH 2051 G HOH 4 1_555 A ASN 12 A ASN 12 11 1_555 A TYR 24 A TYR 24 11 1_555 A ASN 75 A ASN 75 11 1_555 A GLY 77 A GLY 77 11 1_555 A GLY 78 A GLY 78 11 1_555 A HIS 81 A HIS 81 11 1_555 A ASP 88 A ASP 88 11 9_555 A HIS 101 A HIS 101 11 1_555 A ILE 102 A ILE 102 11 1_555 A SER 103 A SER 103 11 1_555 A ARG 112 A ARG 112 11 1_555 196 F 2 3