0.022143
0.012785
0.000000
0.000000
0.025569
0.000000
0.000000
0.000000
0.004902
0.00000
0.00000
0.00000
Bodor, A.
Radnai, L.
Hetenyi, C.
Rapali, P.
Lang, A.
Kover, K.E.
Perczel, A.
Wahlgren, W.Y.
Katona, G.
Nyitray, L.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
120.00
45.160
45.160
204.010
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Co 2
58.933
COBALT (II) ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C4 H12 N O3 1
122.143
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
TRIS BUFFER
non-polymer
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
CO
N
75
N
N
N
76
R
C
N
77
N
C
N
78
N
O
N
79
N
C
N
80
N
S
N
81
N
O
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
N
N
90
S
C
N
91
N
C
N
92
N
O
N
93
N
C
N
94
N
C
N
95
N
C
N
96
N
O
N
97
N
N
N
98
N
O
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
N
N
110
S
C
N
111
N
C
N
112
N
O
N
113
N
C
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
O
N
118
N
O
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
N
N
129
N
C
N
130
N
C
N
131
N
O
N
132
N
O
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
N
N
139
S
C
N
140
N
C
N
141
N
O
N
142
N
C
Y
143
N
C
Y
144
N
N
Y
145
N
C
Y
146
N
C
Y
147
N
N
N
148
N
O
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
O
N
160
N
H
N
161
N
H
N
162
N
N
N
163
S
C
N
164
N
C
N
165
N
O
N
166
S
C
N
167
N
C
N
168
N
C
N
169
N
C
N
170
N
O
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
N
N
185
S
C
N
186
N
C
N
187
N
O
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
C
N
192
N
O
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
N
N
207
S
C
N
208
N
C
N
209
N
O
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
C
N
214
N
N
N
215
N
O
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
N
N
232
S
C
N
233
N
C
N
234
N
O
N
235
N
C
N
236
N
C
N
237
N
S
N
238
N
C
N
239
N
O
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
N
N
252
S
C
N
253
N
C
N
254
N
O
N
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
Y
261
N
C
N
262
N
O
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
N
N
275
S
C
N
276
N
C
N
277
N
O
N
278
N
C
N
279
N
C
N
280
N
C
N
281
N
O
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
N
N
292
S
C
N
293
N
C
N
294
N
O
N
295
N
C
N
296
N
O
N
297
N
O
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
S
N
306
N
O
N
307
N
O
N
308
N
O
N
309
N
O
N
310
N
N
N
311
S
C
N
312
N
C
N
313
N
O
N
314
R
C
N
315
N
O
N
316
N
C
N
317
N
O
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
N
N
328
S
C
N
329
N
C
N
330
N
O
N
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
Y
335
N
N
Y
336
N
C
Y
337
N
C
Y
338
N
C
Y
339
N
C
Y
340
N
C
N
341
N
O
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
C
N
355
N
C
N
356
N
C
N
357
N
C
N
358
N
N
N
359
N
O
N
360
N
O
N
361
N
O
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
N
N
375
S
C
N
376
N
C
N
377
N
O
N
378
N
C
Y
379
N
C
Y
380
N
C
Y
381
N
C
Y
382
N
C
Y
383
N
C
Y
384
N
C
N
385
N
O
N
386
N
O
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
N
N
399
S
C
N
400
N
C
N
401
N
O
N
402
N
C
N
403
N
C
N
404
N
C
N
405
N
O
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
doub
N
291
N
doub
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
doub
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
doub
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
doub
Y
326
N
sing
Y
327
N
sing
N
328
N
sing
Y
329
N
sing
Y
330
N
doub
N
331
N
sing
Y
332
N
doub
N
333
N
sing
Y
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
doub
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
Y
368
N
doub
Y
369
N
sing
Y
370
N
sing
N
371
N
sing
Y
372
N
doub
N
373
N
sing
Y
374
N
doub
N
375
N
sing
Y
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
doub
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
US
Biochemistry
BICHAW
0033
0006-2960
53
7107
10.1021/BI500574Z
25312846
Dynll2 Dynein Light Chain Binds to an Extended Linear Motif of Myosin 5A Tail that Has Structural Plasticity.
2014
10.2210/pdb4d07/pdb
pdb_00004d07
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2003-11-09
ADSC QUANTUM 315r
SINGLE WAVELENGTH
M
x-ray
1
0.93
1.0
ID29
ESRF
0.93
SYNCHROTRON
ESRF BEAMLINE ID29
10647.124
DYNEIN LIGHT CHAIN 2, CYTOPLASMIC
1
man
polymer
3022.365
MYOSIN VA VARIANT
RESIDUES 856-878
1
syn
polymer
58.933
COBALT (II) ION
1
syn
non-polymer
122.143
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
1
syn
non-polymer
96.063
SULFATE ION
1
syn
non-polymer
18.015
water
99
nat
water
8 KDA DYNEIN LIGHT CHAIN B, DLC8B, DYNEIN LIGHT CHAIN LC8-TYPE 2, DYNLL2
MYO5A
no
no
GSHMSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFY
LGQVAILLFKSG
GSHMSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFY
LGQVAILLFKSG
A
polypeptide(L)
no
no
GSHMSQKEAIQPKDDKNTMTDSTILLE
GSHMSQKEAIQPKDDKNTMTDSTILLE
B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
HUMAN
sample
9606
HOMO SAPIENS
469008
ESCHERICHIA COLI
BL21(DE3)
ROSETTA
PET15B
PLASMID
1
2.51
51.03
NONE
2.5UL PROTEIN PLUS 1UL RESERVOIR SOLUTION OF 1.8 M (NH4)2SO4, 0.02 M COCL2, 0.1 M MES PH 6.5
chem_comp_atom
chem_comp_bond
database_2
pdbx_database_status
pdbx_initial_refinement_model
pdbx_struct_conn_angle
struct_conn
struct_site
repository
Initial release
Database references
Database references
Data collection
Database references
Derived calculations
Other
Refinement description
1
0
2014-10-22
1
1
2014-10-29
1
2
2014-12-03
1
3
2023-12-20
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.status_code_sf
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
PDBE
Y
PDBE
2014-04-24
REL
REL
CO
COBALT (II) ION
TRS
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
SO4
SULFATE ION
HOH
water
9606
HUMAN
HOMO SAPIENS
sample
1CMI
PDB ENTRY 1CMI
PDB
experimental model
CO
1090
3
CO
CO
1090
A
TRS
1091
4
TRS
TRS
1091
A
SO4
1092
5
SO4
SO4
1092
A
HOH
2001
6
HOH
HOH
2001
A
HOH
2002
6
HOH
HOH
2002
A
HOH
2003
6
HOH
HOH
2003
A
HOH
2004
6
HOH
HOH
2004
A
HOH
2005
6
HOH
HOH
2005
A
HOH
2006
6
HOH
HOH
2006
A
HOH
2007
6
HOH
HOH
2007
A
HOH
2008
6
HOH
HOH
2008
A
HOH
2009
6
HOH
HOH
2009
A
HOH
2010
6
HOH
HOH
2010
A
HOH
2011
6
HOH
HOH
2011
A
HOH
2012
6
HOH
HOH
2012
A
HOH
2013
6
HOH
HOH
2013
A
HOH
2014
6
HOH
HOH
2014
A
HOH
2015
6
HOH
HOH
2015
A
HOH
2016
6
HOH
HOH
2016
A
HOH
2017
6
HOH
HOH
2017
A
HOH
2018
6
HOH
HOH
2018
A
HOH
2019
6
HOH
HOH
2019
A
HOH
2020
6
HOH
HOH
2020
A
HOH
2021
6
HOH
HOH
2021
A
HOH
2022
6
HOH
HOH
2022
A
HOH
2023
6
HOH
HOH
2023
A
HOH
2024
6
HOH
HOH
2024
A
HOH
2025
6
HOH
HOH
2025
A
HOH
2026
6
HOH
HOH
2026
A
HOH
2027
6
HOH
HOH
2027
A
HOH
2028
6
HOH
HOH
2028
A
HOH
2029
6
HOH
HOH
2029
A
HOH
2030
6
HOH
HOH
2030
A
HOH
2031
6
HOH
HOH
2031
A
HOH
2032
6
HOH
HOH
2032
A
HOH
2033
6
HOH
HOH
2033
A
HOH
2034
6
HOH
HOH
2034
A
HOH
2035
6
HOH
HOH
2035
A
HOH
2036
6
HOH
HOH
2036
A
HOH
2037
6
HOH
HOH
2037
A
HOH
2038
6
HOH
HOH
2038
A
HOH
2039
6
HOH
HOH
2039
A
HOH
2040
6
HOH
HOH
2040
A
HOH
2041
6
HOH
HOH
2041
A
HOH
2042
6
HOH
HOH
2042
A
HOH
2043
6
HOH
HOH
2043
A
HOH
2044
6
HOH
HOH
2044
A
HOH
2045
6
HOH
HOH
2045
A
HOH
2046
6
HOH
HOH
2046
A
HOH
2047
6
HOH
HOH
2047
A
HOH
2048
6
HOH
HOH
2048
A
HOH
2049
6
HOH
HOH
2049
A
HOH
2050
6
HOH
HOH
2050
A
HOH
2051
6
HOH
HOH
2051
A
HOH
2052
6
HOH
HOH
2052
A
HOH
2053
6
HOH
HOH
2053
A
HOH
2054
6
HOH
HOH
2054
A
HOH
2055
6
HOH
HOH
2055
A
HOH
2056
6
HOH
HOH
2056
A
HOH
2057
6
HOH
HOH
2057
A
HOH
2058
6
HOH
HOH
2058
A
HOH
2059
6
HOH
HOH
2059
A
HOH
2060
6
HOH
HOH
2060
A
HOH
2061
6
HOH
HOH
2061
A
HOH
2062
6
HOH
HOH
2062
A
HOH
2063
6
HOH
HOH
2063
A
HOH
2064
6
HOH
HOH
2064
A
HOH
2065
6
HOH
HOH
2065
A
HOH
2066
6
HOH
HOH
2066
A
HOH
2067
6
HOH
HOH
2067
A
HOH
2068
6
HOH
HOH
2068
A
HOH
2069
6
HOH
HOH
2069
A
HOH
2070
6
HOH
HOH
2070
A
HOH
2071
6
HOH
HOH
2071
A
HOH
2072
6
HOH
HOH
2072
A
HOH
2073
6
HOH
HOH
2073
A
HOH
2074
6
HOH
HOH
2074
A
HOH
2075
6
HOH
HOH
2075
A
HOH
2076
6
HOH
HOH
2076
A
HOH
2077
6
HOH
HOH
2077
A
HOH
2078
6
HOH
HOH
2078
A
HOH
2079
6
HOH
HOH
2079
A
HOH
2080
6
HOH
HOH
2080
A
HOH
2081
6
HOH
HOH
2081
A
HOH
2082
6
HOH
HOH
2082
A
HOH
2083
6
HOH
HOH
2083
A
HOH
2084
6
HOH
HOH
2084
A
HOH
2085
6
HOH
HOH
2085
A
HOH
2086
6
HOH
HOH
2086
A
HOH
2087
6
HOH
HOH
2087
A
HOH
2088
6
HOH
HOH
2088
A
HOH
2089
6
HOH
HOH
2089
A
HOH
2090
6
HOH
HOH
2090
A
HOH
2091
6
HOH
HOH
2091
A
HOH
2001
6
HOH
HOH
2001
B
HOH
2002
6
HOH
HOH
2002
B
HOH
2003
6
HOH
HOH
2003
B
HOH
2004
6
HOH
HOH
2004
B
HOH
2005
6
HOH
HOH
2005
B
HOH
2006
6
HOH
HOH
2006
B
HOH
2007
6
HOH
HOH
2007
B
HOH
2008
6
HOH
HOH
2008
B
GLY
-2
n
1
GLY
-2
A
SER
-1
n
2
SER
-1
A
HIS
0
n
3
HIS
0
A
MET
1
n
4
MET
1
A
SER
2
n
5
SER
2
A
ASP
3
n
6
ASP
3
A
ARG
4
n
7
ARG
4
A
LYS
5
n
8
LYS
5
A
ALA
6
n
9
ALA
6
A
VAL
7
n
10
VAL
7
A
ILE
8
n
11
ILE
8
A
LYS
9
n
12
LYS
9
A
ASN
10
n
13
ASN
10
A
ALA
11
n
14
ALA
11
A
ASP
12
n
15
ASP
12
A
MET
13
n
16
MET
13
A
SER
14
n
17
SER
14
A
GLU
15
n
18
GLU
15
A
ASP
16
n
19
ASP
16
A
MET
17
n
20
MET
17
A
GLN
18
n
21
GLN
18
A
GLN
19
n
22
GLN
19
A
ASP
20
n
23
ASP
20
A
ALA
21
n
24
ALA
21
A
VAL
22
n
25
VAL
22
A
ASP
23
n
26
ASP
23
A
CYS
24
n
27
CYS
24
A
ALA
25
n
28
ALA
25
A
THR
26
n
29
THR
26
A
GLN
27
n
30
GLN
27
A
ALA
28
n
31
ALA
28
A
MET
29
n
32
MET
29
A
GLU
30
n
33
GLU
30
A
LYS
31
n
34
LYS
31
A
TYR
32
n
35
TYR
32
A
ASN
33
n
36
ASN
33
A
ILE
34
n
37
ILE
34
A
GLU
35
n
38
GLU
35
A
LYS
36
n
39
LYS
36
A
ASP
37
n
40
ASP
37
A
ILE
38
n
41
ILE
38
A
ALA
39
n
42
ALA
39
A
ALA
40
n
43
ALA
40
A
TYR
41
n
44
TYR
41
A
ILE
42
n
45
ILE
42
A
LYS
43
n
46
LYS
43
A
LYS
44
n
47
LYS
44
A
GLU
45
n
48
GLU
45
A
PHE
46
n
49
PHE
46
A
ASP
47
n
50
ASP
47
A
LYS
48
n
51
LYS
48
A
LYS
49
n
52
LYS
49
A
TYR
50
n
53
TYR
50
A
ASN
51
n
54
ASN
51
A
PRO
52
n
55
PRO
52
A
THR
53
n
56
THR
53
A
TRP
54
n
57
TRP
54
A
HIS
55
n
58
HIS
55
A
CYS
56
n
59
CYS
56
A
ILE
57
n
60
ILE
57
A
VAL
58
n
61
VAL
58
A
GLY
59
n
62
GLY
59
A
ARG
60
n
63
ARG
60
A
ASN
61
n
64
ASN
61
A
PHE
62
n
65
PHE
62
A
GLY
63
n
66
GLY
63
A
SER
64
n
67
SER
64
A
TYR
65
n
68
TYR
65
A
VAL
66
n
69
VAL
66
A
THR
67
n
70
THR
67
A
HIS
68
n
71
HIS
68
A
GLU
69
n
72
GLU
69
A
THR
70
n
73
THR
70
A
LYS
71
n
74
LYS
71
A
HIS
72
n
75
HIS
72
A
PHE
73
n
76
PHE
73
A
ILE
74
n
77
ILE
74
A
TYR
75
n
78
TYR
75
A
PHE
76
n
79
PHE
76
A
TYR
77
n
80
TYR
77
A
LEU
78
n
81
LEU
78
A
GLY
79
n
82
GLY
79
A
GLN
80
n
83
GLN
80
A
VAL
81
n
84
VAL
81
A
ALA
82
n
85
ALA
82
A
ILE
83
n
86
ILE
83
A
LEU
84
n
87
LEU
84
A
LEU
85
n
88
LEU
85
A
PHE
86
n
89
PHE
86
A
LYS
87
n
90
LYS
87
A
SER
88
n
91
SER
88
A
GLY
89
n
92
GLY
89
A
n
1
-8
B
n
2
-7
B
n
3
-6
B
n
4
-5
B
n
5
-4
B
n
6
-3
B
n
7
-2
B
n
8
-1
B
n
9
0
B
n
10
1
B
GLN
2
n
11
GLN
2
B
PRO
3
n
12
PRO
3
B
LYS
4
n
13
LYS
4
B
ASP
5
n
14
ASP
5
B
ASP
6
n
15
ASP
6
B
LYS
7
n
16
LYS
7
B
ASN
8
n
17
ASN
8
B
THR
9
n
18
THR
9
B
MET
10
n
19
MET
10
B
THR
11
n
20
THR
11
B
ASP
12
n
21
ASP
12
B
SER
13
n
22
SER
13
B
n
23
14
B
n
24
15
B
n
25
16
B
n
26
17
B
n
27
18
B
author_and_software_defined_assembly
PISA
4
tetrameric
6140
-62.8
9160
A
HIS
0
A
ND1
HIS
3
1_555
A
CO
1090
C
CO
CO
1_555
A
GLU
30
A
OE1
GLU
33
1_555
88.0
A
HIS
0
A
ND1
HIS
3
1_555
A
CO
1090
C
CO
CO
1_555
A
HOH
2002
F
O
HOH
1_555
89.5
A
GLU
30
A
OE1
GLU
33
1_555
A
CO
1090
C
CO
CO
1_555
A
HOH
2002
F
O
HOH
1_555
173.8
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
0.5000000000
-0.8660254038
0.0000000000
-0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
10_774
-y+2,-x+2,-z-1/6
crystal symmetry operation
45.1600000000
78.2194144698
-34.0016666667
A
N
ASP
12
A
N
ASP
15
A
O
PHE
73
A
O
PHE
76
A
N
LEU
78
A
N
LEU
81
A
O
VAL
81
A
O
VAL
84
A
N
PHE
86
A
N
PHE
89
A
O
HIS
55
A
O
HIS
58
A
N
VAL
66
A
N
VAL
69
B
O
LYS
7
B
O
LYS
16
1
A
HOH
2051
F
HOH
1
A
CG
ARG
4
A
CG
ARG
7
0
Y
1
A
CD
ARG
4
A
CD
ARG
7
0
Y
1
A
NE
ARG
4
A
NE
ARG
7
0
Y
1
A
CZ
ARG
4
A
CZ
ARG
7
0
Y
1
A
NH1
ARG
4
A
NH1
ARG
7
0
Y
1
A
NH2
ARG
4
A
NH2
ARG
7
0
Y
1
A
CD
GLU
15
A
CD
GLU
18
0
Y
1
A
OE1
GLU
15
A
OE1
GLU
18
0
Y
1
A
OE2
GLU
15
A
OE2
GLU
18
0
Y
1
A
CE
LYS
48
A
CE
LYS
51
0
Y
1
A
NZ
LYS
48
A
NZ
LYS
51
0
Y
1
A
OE1
GLN
80
A
OE1
GLN
83
0
Y
1
A
NE2
GLN
80
A
NE2
GLN
83
0
Y
1
B
CG
LYS
4
B
CG
LYS
13
0
Y
1
B
CD
LYS
4
B
CD
LYS
13
0
Y
1
B
CE
LYS
4
B
CE
LYS
13
0
Y
1
B
NZ
LYS
4
B
NZ
LYS
13
0
Y
1
B
GLY
-8
B
GLY
1
1
Y
1
B
SER
-7
B
SER
2
1
Y
1
B
HIS
-6
B
HIS
3
1
Y
1
B
MET
-5
B
MET
4
1
Y
1
B
SER
-4
B
SER
5
1
Y
1
B
GLN
-3
B
GLN
6
1
Y
1
B
LYS
-2
B
LYS
7
1
Y
1
B
GLU
-1
B
GLU
8
1
Y
1
B
ALA
0
B
ALA
9
1
Y
1
B
ILE
1
B
ILE
10
1
Y
1
B
THR
14
B
THR
23
1
Y
1
B
ILE
15
B
ILE
24
1
Y
1
B
LEU
16
B
LEU
25
1
Y
1
B
LEU
17
B
LEU
26
1
Y
1
B
GLU
18
B
GLU
27
1
Y
1
A
A
NH2
O4
ARG
SO4
4
1092
1.89
1
A
A
OE1
O1
GLN
TRS
80
1091
1.94
1
A
GLN
80
0.139
SIDE CHAIN
1
22.06
2.00
118.30
140.36
A
A
A
CG
CD
OE1
GLU
GLU
GLU
15
15
15
N
1
-21.52
2.00
118.30
96.78
A
A
A
CG
CD
OE2
GLU
GLU
GLU
15
15
15
N
1
-15.35
2.30
121.90
106.55
A
A
A
OE1
CD
NE2
GLN
GLN
GLN
80
80
80
N
1
A
A
CG
CD
GLU
GLU
15
15
-0.175
0.015
1.515
1.340
N
1
A
A
CD
OE1
GLN
GLN
80
80
0.369
0.022
1.235
1.604
N
1
B
B
CB
CG
LYS
LYS
4
4
-0.230
0.027
1.521
1.291
N
1
A
A
O
O
HOH
HOH
2007
2033
1.71
1_555
8_565
1
A
SER
-1
-160.78
-10.10
1
A
ASN
51
73.02
149.86
21.851
0.75
0.37
0.00
0.75
0.00
-2.42
0.954
0.930
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.
0.23300
0.19303
0.19492
1.85
204.01
544
10853
4.8
99.82
2.970
0.091
RANDOM
1
THROUGHOUT
MOLECULAR REPLACEMENT
0.138
0.133
0.80
0.80
1.20
PDB ENTRY 1CMI
MAXIMUM LIKELIHOOD
MASK
1.85
204.01
99
954
14
0
841
0.007
0.019
918
1.113
1.941
1250
5.548
5.000
121
31.126
25.682
44
13.289
15.000
169
0.183
15.000
1
0.086
0.200
134
0.004
0.020
696
1.046
1.898
438
1.805
2.807
549
1.277
2.116
479
0.313
0.251
1.898
34
788
20
99.64
1.85
19.76
4D07
11478
2.0
0.10
1
30.18
22
99.8
0.70
1.85
1.90
6.09
1
20
100.0
refinement
REFMAC
5.8.0069
data reduction
XDS
data scaling
XSCALE
phasing
PHASER
DYNLL2 dynein light chain binds to an extended, unstructured linear motif of myosin 5a tail
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
6
N
N
6
N
N
A
SER
14
A
SER
17
HELX_P
A
TYR
32
A
TYR
35
1
1
19
A
ILE
34
A
ILE
37
HELX_P
A
ASN
51
A
ASN
54
1
2
18
metalc
2.036
A
HIS
0
A
ND1
HIS
3
1_555
A
CO
1090
C
CO
CO
1_555
metalc
2.222
A
GLU
30
A
OE1
GLU
33
1_555
A
CO
1090
C
CO
CO
1_555
metalc
2.427
A
CO
1090
C
CO
CO
1_555
A
HOH
2002
F
O
HOH
1_555
MOTOR PROTEIN
MOTOR PROTEIN, INSTRINSICALLY DISORDERED DOMAIN, HUB PROTEIN
A
PRO
52
A
PRO
55
1
A
THR
53
A
THR
56
9.20
DYL2_HUMAN
UNP
1
Q96FJ2
Q59FF5_HUMAN
UNP
2
Q59FF5
1
89
4D07
1
89
Q96FJ2
A
1
4
92
856
878
4D07
-4
18
Q59FF5
B
2
5
27
1
expression tag
GLY
-2
4D07
A
Q96FJ2
UNP
1
1
expression tag
SER
-1
4D07
A
Q96FJ2
UNP
2
1
expression tag
HIS
0
4D07
A
Q96FJ2
UNP
3
2
expression tag
GLY
-8
4D07
B
Q59FF5
UNP
1
2
expression tag
SER
-7
4D07
B
Q59FF5
UNP
2
2
expression tag
HIS
-6
4D07
B
Q59FF5
UNP
3
2
expression tag
MET
-5
4D07
B
Q59FF5
UNP
4
4
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ALA
6
A
ALA
9
A
MET
13
A
MET
16
A
HIS
72
A
HIS
75
A
LEU
78
A
LEU
81
A
VAL
81
A
VAL
84
A
LYS
87
A
LYS
90
A
TRP
54
A
TRP
57
A
GLY
59
A
GLY
62
A
GLY
63
A
GLY
66
A
THR
67
A
THR
70
B
ASP
6
B
ASP
15
B
MET
10
B
MET
19
BINDING SITE FOR RESIDUE CO A 1090
A
CO
1090
Software
5
BINDING SITE FOR RESIDUE TRS A 1091
A
TRS
1091
Software
5
BINDING SITE FOR RESIDUE SO4 A 1092
A
SO4
1092
Software
3
A
GLY
-2
A
GLY
1
5
1_555
A
SER
-1
A
SER
2
5
1_555
A
HIS
0
A
HIS
3
5
1_555
A
GLU
30
A
GLU
33
5
1_555
A
HOH
2002
F
HOH
5
1_555
A
LYS
9
A
LYS
12
5
1_555
A
TYR
77
A
TYR
80
5
1_555
A
GLY
79
A
GLY
82
5
1_555
A
GLN
80
A
GLN
83
5
1_555
B
ASP
12
B
ASP
21
5
1_555
A
ARG
60
A
ARG
63
3
1_555
A
GLY
79
A
GLY
82
3
1_555
A
GLN
80
A
GLN
83
3
1_555
178
P 61 2 2