0.017698
0.000000
0.000000
0.000000
0.017698
0.000000
0.000000
0.000000
0.004298
0.00000
0.00000
0.00000
Kvansakul, M.
Colman, P.M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
16
90.00
90.00
90.00
56.503
56.503
232.685
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Cl -1
35.453
CHLORIDE ION
non-polymer
C5 H11 N O3 S2
197.276
n
S,S-(2-HYDROXYETHYL)THIOCYSTEINE
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C6 H14 O2
118.174
(4R)-2-METHYLPENTANE-2,4-DIOL
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
CL
N
75
N
N
N
76
R
C
N
77
N
C
N
78
N
S
N
79
N
S
N
80
N
C
N
81
N
C
N
82
N
O
N
83
N
C
N
84
N
O
N
85
N
O
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
N
N
98
R
C
N
99
N
C
N
100
N
O
N
101
N
C
N
102
N
S
N
103
N
O
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
N
N
112
S
C
N
113
N
C
N
114
N
O
N
115
N
C
N
116
N
C
N
117
N
C
N
118
N
O
N
119
N
N
N
120
N
O
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
N
N
132
S
C
N
133
N
C
N
134
N
O
N
135
N
C
N
136
N
C
N
137
N
C
N
138
N
O
N
139
N
O
N
140
N
O
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
N
N
151
N
C
N
152
N
C
N
153
N
O
N
154
N
O
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
N
N
161
S
C
N
162
N
C
N
163
N
O
N
164
N
C
Y
165
N
C
Y
166
N
N
Y
167
N
C
Y
168
N
C
Y
169
N
N
N
170
N
O
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
O
N
182
N
H
N
183
N
H
N
184
N
N
N
185
S
C
N
186
N
C
N
187
N
O
N
188
S
C
N
189
N
C
N
190
N
C
N
191
N
C
N
192
N
O
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
N
N
207
S
C
N
208
N
C
N
209
N
O
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
C
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
N
N
229
S
C
N
230
N
C
N
231
N
O
N
232
N
C
N
233
N
C
N
234
N
C
N
235
N
C
N
236
N
N
N
237
N
O
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
N
N
254
S
C
N
255
N
C
N
256
N
O
N
257
N
C
N
258
N
C
N
259
N
S
N
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
C
N
274
N
C
N
275
N
O
N
276
N
C
N
277
N
C
N
278
R
C
N
279
N
O
N
280
N
C
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
N
N
296
S
C
N
297
N
C
N
298
N
O
N
299
N
C
Y
300
N
C
Y
301
N
C
Y
302
N
C
Y
303
N
C
Y
304
N
C
Y
305
N
C
N
306
N
O
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
N
N
319
S
C
N
320
N
C
N
321
N
O
N
322
N
C
N
323
N
C
N
324
N
C
N
325
N
O
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
N
N
336
S
C
N
337
N
C
N
338
N
O
N
339
N
C
N
340
N
O
N
341
N
O
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
N
N
350
S
C
N
351
N
C
N
352
N
O
N
353
R
C
N
354
N
O
N
355
N
C
N
356
N
O
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
N
N
367
S
C
N
368
N
C
N
369
N
O
N
370
N
C
Y
371
N
C
Y
372
N
C
Y
373
N
C
Y
374
N
N
Y
375
N
C
Y
376
N
C
Y
377
N
C
Y
378
N
C
Y
379
N
C
N
380
N
O
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
N
N
394
S
C
N
395
N
C
N
396
N
O
N
397
N
C
Y
398
N
C
Y
399
N
C
Y
400
N
C
Y
401
N
C
Y
402
N
C
Y
403
N
C
N
404
N
O
N
405
N
O
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
N
N
418
S
C
N
419
N
C
N
420
N
O
N
421
N
C
N
422
N
C
N
423
N
C
N
424
N
O
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
doub
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
doub
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
doub
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
doub
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
doub
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
doub
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
doub
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
Y
161
N
sing
Y
162
N
doub
Y
163
N
doub
N
164
N
sing
Y
165
N
sing
N
166
N
sing
Y
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
doub
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
doub
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
doub
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
Y
290
N
doub
Y
291
N
sing
Y
292
N
sing
N
293
N
sing
Y
294
N
doub
N
295
N
sing
Y
296
N
doub
N
297
N
sing
Y
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
doub
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
doub
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
doub
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
doub
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
Y
359
N
doub
Y
360
N
sing
Y
361
N
sing
N
362
N
sing
Y
363
N
doub
Y
364
N
sing
Y
365
N
sing
N
366
N
sing
Y
367
N
sing
Y
368
N
doub
N
369
N
sing
Y
370
N
doub
N
371
N
sing
Y
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
doub
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
Y
387
N
doub
Y
388
N
sing
Y
389
N
sing
N
390
N
sing
Y
391
N
doub
N
392
N
sing
Y
393
N
doub
N
394
N
sing
Y
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
doub
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
US
J.Virol.
JOVIAM
0825
0022-538X
88
8667
10.1128/JVI.01092-14
24850748
Structural Insight Into Bh3-Domain Binding of Vaccinia Virus Anti-Apoptotic F1L.
2014
10.2210/pdb4d2m/pdb
pdb_00004d2m
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
ADSC QUANTUM 315r
SINGLE WAVELENGTH
M
x-ray
1
0.95
1.0
MX2
Australian Synchrotron
0.95
SYNCHROTRON
AUSTRALIAN SYNCHROTRON BEAMLINE MX2
21566.379
PROTEIN F1
RESIDUES 18-186
YES
2
man
polymer
3274.691
BCL-2-LIKE PROTEIN 11
RESIDUES 141-166
2
man
polymer
118.174
(4R)-2-METHYLPENTANE-2,4-DIOL
1
syn
non-polymer
35.453
CHLORIDE ION
4
syn
non-polymer
18.015
water
123
nat
water
BCL2-L-11, BCL2-INTERACTING MEDIATOR OF CELL DEATH
no
yes
MGSHHHHHHSQDPVQDIEDEASNNVDHDYVYPLPENMVYRFDKSTNILDYLSTERDHVMMAVRYYMSKQRLDDLYRQLPT
KTRSYIDIINIYCDKVSNDYNRDMNIMYDMASTKSFTVYDFNNEVNTIMLDNKGLGVRLATISFITELGRR(CME)MNPV
KTIKMFTLLSHTICDDCFVDYITDIS
MGSHHHHHHSQDPVQDIEDEASNNVDHDYVYPLPENMVYRFDKSTNILDYLSTERDHVMMAVRYYMSKQRLDDLYRQLPT
KTRSYIDIINIYCDKVSNDYNRDMNIMYDMASTKSFTVYDFNNEVNTIMLDNKGLGVRLATISFITELGRRCMNPVKTIK
MFTLLSHTICDDCFVDYITDIS
A,C
polypeptide(L)
no
no
DMRPEIWIAQELRRIGDEFNAYYARR
DMRPEIWIAQELRRIGDEFNAYYARR
B,D
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
126794
VACCINIA VIRUS ANKARA
469008
ESCHERICHIA COLI
BL21(DE3)
PLYZS
PLASMID
PET DUET
HUMAN
sample
9606
HOMO SAPIENS
469008
ESCHERICHIA COLI
BL21(DE3)
PLYZS
PLASMID
PET DUET
1
1.9
35
NONE
6.2
0.2M KCL, 15 % PEG400, 1.44 % MPD AND 0.1M AMMONIUM CITRATE PH 6.2.
chem_comp_atom
chem_comp_bond
database_2
pdbx_database_status
pdbx_initial_refinement_model
struct_conn
struct_site
repository
Initial release
Atomic model
Database references
Data collection
Database references
Derived calculations
Other
Refinement description
1
0
2014-06-04
1
1
2014-06-18
1
2
2014-08-13
1
3
2023-12-20
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.status_code_sf
_struct_conn.pdbx_leaving_atom_flag
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
VACCINIA VIRUS F1L BOUND TO BIM BH3
PDBE
Y
PDBE
2014-05-12
REL
REL
1
A
O
HOH
2063
7.94
1
B
O
HOH
2003
8.73
1
C
O
HOH
2006
6.98
1
C
O
HOH
2048
6.80
1
C
O
HOH
2050
9.43
1
C
O
HOH
2051
6.77
1
C
O
HOH
2052
6.54
1
C
O
HOH
2053
6.29
1
D
O
HOH
2009
9.56
MRD
(4R)-2-METHYLPENTANE-2,4-DIOL
CL
CHLORIDE ION
HOH
water
2VTY
PDB ENTRY 2VTY
PDB
experimental model
MRD
1188
3
MRD
MRD
1188
A
CL
1189
4
CL
CL
1189
A
CL
1190
4
CL
CL
1190
A
CL
1191
4
CL
CL
1191
A
CL
1188
4
CL
CL
1188
C
HOH
2001
5
HOH
HOH
2001
A
HOH
2002
5
HOH
HOH
2002
A
HOH
2003
5
HOH
HOH
2003
A
HOH
2004
5
HOH
HOH
2004
A
HOH
2005
5
HOH
HOH
2005
A
HOH
2006
5
HOH
HOH
2006
A
HOH
2007
5
HOH
HOH
2007
A
HOH
2008
5
HOH
HOH
2008
A
HOH
2009
5
HOH
HOH
2009
A
HOH
2010
5
HOH
HOH
2010
A
HOH
2011
5
HOH
HOH
2011
A
HOH
2012
5
HOH
HOH
2012
A
HOH
2013
5
HOH
HOH
2013
A
HOH
2014
5
HOH
HOH
2014
A
HOH
2015
5
HOH
HOH
2015
A
HOH
2016
5
HOH
HOH
2016
A
HOH
2017
5
HOH
HOH
2017
A
HOH
2018
5
HOH
HOH
2018
A
HOH
2019
5
HOH
HOH
2019
A
HOH
2020
5
HOH
HOH
2020
A
HOH
2021
5
HOH
HOH
2021
A
HOH
2022
5
HOH
HOH
2022
A
HOH
2023
5
HOH
HOH
2023
A
HOH
2024
5
HOH
HOH
2024
A
HOH
2025
5
HOH
HOH
2025
A
HOH
2026
5
HOH
HOH
2026
A
HOH
2027
5
HOH
HOH
2027
A
HOH
2028
5
HOH
HOH
2028
A
HOH
2029
5
HOH
HOH
2029
A
HOH
2030
5
HOH
HOH
2030
A
HOH
2031
5
HOH
HOH
2031
A
HOH
2032
5
HOH
HOH
2032
A
HOH
2033
5
HOH
HOH
2033
A
HOH
2034
5
HOH
HOH
2034
A
HOH
2035
5
HOH
HOH
2035
A
HOH
2036
5
HOH
HOH
2036
A
HOH
2037
5
HOH
HOH
2037
A
HOH
2038
5
HOH
HOH
2038
A
HOH
2039
5
HOH
HOH
2039
A
HOH
2040
5
HOH
HOH
2040
A
HOH
2041
5
HOH
HOH
2041
A
HOH
2042
5
HOH
HOH
2042
A
HOH
2043
5
HOH
HOH
2043
A
HOH
2044
5
HOH
HOH
2044
A
HOH
2045
5
HOH
HOH
2045
A
HOH
2046
5
HOH
HOH
2046
A
HOH
2047
5
HOH
HOH
2047
A
HOH
2048
5
HOH
HOH
2048
A
HOH
2049
5
HOH
HOH
2049
A
HOH
2050
5
HOH
HOH
2050
A
HOH
2051
5
HOH
HOH
2051
A
HOH
2052
5
HOH
HOH
2052
A
HOH
2053
5
HOH
HOH
2053
A
HOH
2054
5
HOH
HOH
2054
A
HOH
2055
5
HOH
HOH
2055
A
HOH
2056
5
HOH
HOH
2056
A
HOH
2057
5
HOH
HOH
2057
A
HOH
2058
5
HOH
HOH
2058
A
HOH
2059
5
HOH
HOH
2059
A
HOH
2060
5
HOH
HOH
2060
A
HOH
2061
5
HOH
HOH
2061
A
HOH
2062
5
HOH
HOH
2062
A
HOH
2063
5
HOH
HOH
2063
A
HOH
2001
5
HOH
HOH
2001
B
HOH
2002
5
HOH
HOH
2002
B
HOH
2003
5
HOH
HOH
2003
B
HOH
2001
5
HOH
HOH
2001
C
HOH
2002
5
HOH
HOH
2002
C
HOH
2003
5
HOH
HOH
2003
C
HOH
2004
5
HOH
HOH
2004
C
HOH
2005
5
HOH
HOH
2005
C
HOH
2006
5
HOH
HOH
2006
C
HOH
2007
5
HOH
HOH
2007
C
HOH
2008
5
HOH
HOH
2008
C
HOH
2009
5
HOH
HOH
2009
C
HOH
2010
5
HOH
HOH
2010
C
HOH
2011
5
HOH
HOH
2011
C
HOH
2012
5
HOH
HOH
2012
C
HOH
2013
5
HOH
HOH
2013
C
HOH
2014
5
HOH
HOH
2014
C
HOH
2015
5
HOH
HOH
2015
C
HOH
2016
5
HOH
HOH
2016
C
HOH
2017
5
HOH
HOH
2017
C
HOH
2018
5
HOH
HOH
2018
C
HOH
2019
5
HOH
HOH
2019
C
HOH
2020
5
HOH
HOH
2020
C
HOH
2021
5
HOH
HOH
2021
C
HOH
2022
5
HOH
HOH
2022
C
HOH
2023
5
HOH
HOH
2023
C
HOH
2024
5
HOH
HOH
2024
C
HOH
2025
5
HOH
HOH
2025
C
HOH
2026
5
HOH
HOH
2026
C
HOH
2027
5
HOH
HOH
2027
C
HOH
2028
5
HOH
HOH
2028
C
HOH
2029
5
HOH
HOH
2029
C
HOH
2030
5
HOH
HOH
2030
C
HOH
2031
5
HOH
HOH
2031
C
HOH
2032
5
HOH
HOH
2032
C
HOH
2033
5
HOH
HOH
2033
C
HOH
2034
5
HOH
HOH
2034
C
HOH
2035
5
HOH
HOH
2035
C
HOH
2036
5
HOH
HOH
2036
C
HOH
2037
5
HOH
HOH
2037
C
HOH
2038
5
HOH
HOH
2038
C
HOH
2039
5
HOH
HOH
2039
C
HOH
2040
5
HOH
HOH
2040
C
HOH
2041
5
HOH
HOH
2041
C
HOH
2042
5
HOH
HOH
2042
C
HOH
2043
5
HOH
HOH
2043
C
HOH
2044
5
HOH
HOH
2044
C
HOH
2045
5
HOH
HOH
2045
C
HOH
2046
5
HOH
HOH
2046
C
HOH
2047
5
HOH
HOH
2047
C
HOH
2048
5
HOH
HOH
2048
C
HOH
2049
5
HOH
HOH
2049
C
HOH
2050
5
HOH
HOH
2050
C
HOH
2051
5
HOH
HOH
2051
C
HOH
2052
5
HOH
HOH
2052
C
HOH
2053
5
HOH
HOH
2053
C
HOH
2054
5
HOH
HOH
2054
C
HOH
2001
5
HOH
HOH
2001
D
HOH
2002
5
HOH
HOH
2002
D
HOH
2009
5
HOH
HOH
2009
D
n
1
5
A
n
2
6
A
n
3
7
A
n
4
8
A
n
5
9
A
n
6
10
A
n
7
11
A
n
8
12
A
n
9
13
A
n
10
14
A
n
11
15
A
n
12
16
A
n
13
17
A
n
14
18
A
n
15
19
A
n
16
20
A
n
17
21
A
n
18
22
A
n
19
23
A
n
20
24
A
n
21
25
A
n
22
26
A
n
23
27
A
n
24
28
A
n
25
29
A
n
26
30
A
n
27
31
A
n
28
32
A
n
29
33
A
n
30
34
A
n
31
35
A
n
32
36
A
n
33
37
A
n
34
38
A
n
35
39
A
n
36
40
A
n
37
41
A
n
38
42
A
n
39
43
A
n
40
44
A
n
41
45
A
n
42
46
A
n
43
47
A
n
44
48
A
n
45
49
A
n
46
50
A
ILE
51
n
47
ILE
51
A
LEU
52
n
48
LEU
52
A
ASP
53
n
49
ASP
53
A
TYR
54
n
50
TYR
54
A
LEU
55
n
51
LEU
55
A
SER
56
n
52
SER
56
A
THR
57
n
53
THR
57
A
GLU
58
n
54
GLU
58
A
ARG
59
n
55
ARG
59
A
ASP
60
n
56
ASP
60
A
HIS
61
n
57
HIS
61
A
VAL
62
n
58
VAL
62
A
MET
63
n
59
MET
63
A
MET
64
n
60
MET
64
A
ALA
65
n
61
ALA
65
A
VAL
66
n
62
VAL
66
A
ARG
67
n
63
ARG
67
A
TYR
68
n
64
TYR
68
A
TYR
69
n
65
TYR
69
A
MET
70
n
66
MET
70
A
SER
71
n
67
SER
71
A
LYS
72
n
68
LYS
72
A
GLN
73
n
69
GLN
73
A
ARG
74
n
70
ARG
74
A
LEU
75
n
71
LEU
75
A
ASP
76
n
72
ASP
76
A
ASP
77
n
73
ASP
77
A
LEU
78
n
74
LEU
78
A
TYR
79
n
75
TYR
79
A
ARG
80
n
76
ARG
80
A
GLN
81
n
77
GLN
81
A
LEU
82
n
78
LEU
82
A
PRO
83
n
79
PRO
83
A
THR
84
n
80
THR
84
A
LYS
85
n
81
LYS
85
A
THR
86
n
82
THR
86
A
ARG
87
n
83
ARG
87
A
SER
88
n
84
SER
88
A
TYR
89
n
85
TYR
89
A
ILE
90
n
86
ILE
90
A
ASP
91
n
87
ASP
91
A
ILE
92
n
88
ILE
92
A
ILE
93
n
89
ILE
93
A
ASN
94
n
90
ASN
94
A
ILE
95
n
91
ILE
95
A
TYR
96
n
92
TYR
96
A
CYS
97
n
93
CYS
97
A
ASP
98
n
94
ASP
98
A
LYS
99
n
95
LYS
99
A
VAL
100
n
96
VAL
100
A
SER
101
n
97
SER
101
A
ASN
102
n
98
ASN
102
A
ASP
103
n
99
ASP
103
A
TYR
104
n
100
TYR
104
A
ASN
105
n
101
ASN
105
A
ARG
106
n
102
ARG
106
A
ASP
107
n
103
ASP
107
A
MET
108
n
104
MET
108
A
ASN
109
n
105
ASN
109
A
ILE
110
n
106
ILE
110
A
MET
111
n
107
MET
111
A
TYR
112
n
108
TYR
112
A
ASP
113
n
109
ASP
113
A
MET
114
n
110
MET
114
A
ALA
115
n
111
ALA
115
A
SER
116
n
112
SER
116
A
THR
117
n
113
THR
117
A
LYS
118
n
114
LYS
118
A
SER
119
n
115
SER
119
A
PHE
120
n
116
PHE
120
A
THR
121
n
117
THR
121
A
VAL
122
n
118
VAL
122
A
TYR
123
n
119
TYR
123
A
ASP
124
n
120
ASP
124
A
PHE
125
n
121
PHE
125
A
ASN
126
n
122
ASN
126
A
ASN
127
n
123
ASN
127
A
GLU
128
n
124
GLU
128
A
VAL
129
n
125
VAL
129
A
ASN
130
n
126
ASN
130
A
THR
131
n
127
THR
131
A
ILE
132
n
128
ILE
132
A
MET
133
n
129
MET
133
A
LEU
134
n
130
LEU
134
A
ASP
135
n
131
ASP
135
A
ASN
136
n
132
ASN
136
A
LYS
137
n
133
LYS
137
A
GLY
138
n
134
GLY
138
A
LEU
139
n
135
LEU
139
A
GLY
140
n
136
GLY
140
A
VAL
141
n
137
VAL
141
A
ARG
142
n
138
ARG
142
A
LEU
143
n
139
LEU
143
A
ALA
144
n
140
ALA
144
A
THR
145
n
141
THR
145
A
ILE
146
n
142
ILE
146
A
SER
147
n
143
SER
147
A
PHE
148
n
144
PHE
148
A
ILE
149
n
145
ILE
149
A
THR
150
n
146
THR
150
A
GLU
151
n
147
GLU
151
A
LEU
152
n
148
LEU
152
A
GLY
153
n
149
GLY
153
A
ARG
154
n
150
ARG
154
A
ARG
155
n
151
ARG
155
A
CME
156
n
152
CME
156
A
MET
157
n
153
MET
157
A
ASN
158
n
154
ASN
158
A
PRO
159
n
155
PRO
159
A
VAL
160
n
156
VAL
160
A
LYS
161
n
157
LYS
161
A
THR
162
n
158
THR
162
A
ILE
163
n
159
ILE
163
A
LYS
164
n
160
LYS
164
A
MET
165
n
161
MET
165
A
PHE
166
n
162
PHE
166
A
THR
167
n
163
THR
167
A
LEU
168
n
164
LEU
168
A
LEU
169
n
165
LEU
169
A
SER
170
n
166
SER
170
A
HIS
171
n
167
HIS
171
A
THR
172
n
168
THR
172
A
ILE
173
n
169
ILE
173
A
CYS
174
n
170
CYS
174
A
ASP
175
n
171
ASP
175
A
ASP
176
n
172
ASP
176
A
CYS
177
n
173
CYS
177
A
PHE
178
n
174
PHE
178
A
VAL
179
n
175
VAL
179
A
ASP
180
n
176
ASP
180
A
TYR
181
n
177
TYR
181
A
ILE
182
n
178
ILE
182
A
THR
183
n
179
THR
183
A
ASP
184
n
180
ASP
184
A
ILE
185
n
181
ILE
185
A
SER
186
n
182
SER
186
A
n
1
51
B
n
2
52
B
ARG
53
n
3
ARG
53
B
PRO
54
n
4
PRO
54
B
GLU
55
n
5
GLU
55
B
ILE
56
n
6
ILE
56
B
TRP
57
n
7
TRP
57
B
ILE
58
n
8
ILE
58
B
ALA
59
n
9
ALA
59
B
GLN
60
n
10
GLN
60
B
GLU
61
n
11
GLU
61
B
LEU
62
n
12
LEU
62
B
ARG
63
n
13
ARG
63
B
ARG
64
n
14
ARG
64
B
ILE
65
n
15
ILE
65
B
GLY
66
n
16
GLY
66
B
ASP
67
n
17
ASP
67
B
GLU
68
n
18
GLU
68
B
PHE
69
n
19
PHE
69
B
ASN
70
n
20
ASN
70
B
ALA
71
n
21
ALA
71
B
TYR
72
n
22
TYR
72
B
TYR
73
n
23
TYR
73
B
ALA
74
n
24
ALA
74
B
n
25
75
B
n
26
76
B
n
1
5
C
n
2
6
C
n
3
7
C
n
4
8
C
n
5
9
C
n
6
10
C
n
7
11
C
n
8
12
C
n
9
13
C
n
10
14
C
n
11
15
C
n
12
16
C
n
13
17
C
n
14
18
C
n
15
19
C
n
16
20
C
n
17
21
C
n
18
22
C
n
19
23
C
n
20
24
C
n
21
25
C
n
22
26
C
n
23
27
C
n
24
28
C
n
25
29
C
n
26
30
C
n
27
31
C
n
28
32
C
n
29
33
C
n
30
34
C
n
31
35
C
n
32
36
C
n
33
37
C
n
34
38
C
n
35
39
C
n
36
40
C
n
37
41
C
n
38
42
C
n
39
43
C
n
40
44
C
n
41
45
C
n
42
46
C
n
43
47
C
n
44
48
C
n
45
49
C
n
46
50
C
ILE
51
n
47
ILE
51
C
LEU
52
n
48
LEU
52
C
ASP
53
n
49
ASP
53
C
TYR
54
n
50
TYR
54
C
LEU
55
n
51
LEU
55
C
SER
56
n
52
SER
56
C
THR
57
n
53
THR
57
C
GLU
58
n
54
GLU
58
C
ARG
59
n
55
ARG
59
C
ASP
60
n
56
ASP
60
C
HIS
61
n
57
HIS
61
C
VAL
62
n
58
VAL
62
C
MET
63
n
59
MET
63
C
MET
64
n
60
MET
64
C
ALA
65
n
61
ALA
65
C
VAL
66
n
62
VAL
66
C
ARG
67
n
63
ARG
67
C
TYR
68
n
64
TYR
68
C
TYR
69
n
65
TYR
69
C
MET
70
n
66
MET
70
C
SER
71
n
67
SER
71
C
LYS
72
n
68
LYS
72
C
GLN
73
n
69
GLN
73
C
ARG
74
n
70
ARG
74
C
LEU
75
n
71
LEU
75
C
ASP
76
n
72
ASP
76
C
ASP
77
n
73
ASP
77
C
LEU
78
n
74
LEU
78
C
TYR
79
n
75
TYR
79
C
ARG
80
n
76
ARG
80
C
GLN
81
n
77
GLN
81
C
LEU
82
n
78
LEU
82
C
PRO
83
n
79
PRO
83
C
THR
84
n
80
THR
84
C
LYS
85
n
81
LYS
85
C
THR
86
n
82
THR
86
C
ARG
87
n
83
ARG
87
C
SER
88
n
84
SER
88
C
TYR
89
n
85
TYR
89
C
ILE
90
n
86
ILE
90
C
ASP
91
n
87
ASP
91
C
ILE
92
n
88
ILE
92
C
ILE
93
n
89
ILE
93
C
ASN
94
n
90
ASN
94
C
ILE
95
n
91
ILE
95
C
TYR
96
n
92
TYR
96
C
CYS
97
n
93
CYS
97
C
ASP
98
n
94
ASP
98
C
LYS
99
n
95
LYS
99
C
VAL
100
n
96
VAL
100
C
SER
101
n
97
SER
101
C
ASN
102
n
98
ASN
102
C
ASP
103
n
99
ASP
103
C
TYR
104
n
100
TYR
104
C
ASN
105
n
101
ASN
105
C
ARG
106
n
102
ARG
106
C
ASP
107
n
103
ASP
107
C
MET
108
n
104
MET
108
C
ASN
109
n
105
ASN
109
C
ILE
110
n
106
ILE
110
C
MET
111
n
107
MET
111
C
TYR
112
n
108
TYR
112
C
ASP
113
n
109
ASP
113
C
MET
114
n
110
MET
114
C
ALA
115
n
111
ALA
115
C
SER
116
n
112
SER
116
C
THR
117
n
113
THR
117
C
LYS
118
n
114
LYS
118
C
SER
119
n
115
SER
119
C
PHE
120
n
116
PHE
120
C
THR
121
n
117
THR
121
C
VAL
122
n
118
VAL
122
C
TYR
123
n
119
TYR
123
C
ASP
124
n
120
ASP
124
C
PHE
125
n
121
PHE
125
C
ASN
126
n
122
ASN
126
C
ASN
127
n
123
ASN
127
C
GLU
128
n
124
GLU
128
C
VAL
129
n
125
VAL
129
C
ASN
130
n
126
ASN
130
C
THR
131
n
127
THR
131
C
ILE
132
n
128
ILE
132
C
MET
133
n
129
MET
133
C
LEU
134
n
130
LEU
134
C
ASP
135
n
131
ASP
135
C
ASN
136
n
132
ASN
136
C
LYS
137
n
133
LYS
137
C
GLY
138
n
134
GLY
138
C
LEU
139
n
135
LEU
139
C
GLY
140
n
136
GLY
140
C
VAL
141
n
137
VAL
141
C
ARG
142
n
138
ARG
142
C
LEU
143
n
139
LEU
143
C
ALA
144
n
140
ALA
144
C
THR
145
n
141
THR
145
C
ILE
146
n
142
ILE
146
C
SER
147
n
143
SER
147
C
PHE
148
n
144
PHE
148
C
ILE
149
n
145
ILE
149
C
THR
150
n
146
THR
150
C
GLU
151
n
147
GLU
151
C
LEU
152
n
148
LEU
152
C
GLY
153
n
149
GLY
153
C
ARG
154
n
150
ARG
154
C
ARG
155
n
151
ARG
155
C
CME
156
n
152
CME
156
C
MET
157
n
153
MET
157
C
ASN
158
n
154
ASN
158
C
PRO
159
n
155
PRO
159
C
VAL
160
n
156
VAL
160
C
LYS
161
n
157
LYS
161
C
THR
162
n
158
THR
162
C
ILE
163
n
159
ILE
163
C
LYS
164
n
160
LYS
164
C
MET
165
n
161
MET
165
C
PHE
166
n
162
PHE
166
C
THR
167
n
163
THR
167
C
LEU
168
n
164
LEU
168
C
LEU
169
n
165
LEU
169
C
SER
170
n
166
SER
170
C
HIS
171
n
167
HIS
171
C
THR
172
n
168
THR
172
C
ILE
173
n
169
ILE
173
C
CYS
174
n
170
CYS
174
C
ASP
175
n
171
ASP
175
C
ASP
176
n
172
ASP
176
C
CYS
177
n
173
CYS
177
C
PHE
178
n
174
PHE
178
C
VAL
179
n
175
VAL
179
C
ASP
180
n
176
ASP
180
C
TYR
181
n
177
TYR
181
C
ILE
182
n
178
ILE
182
C
THR
183
n
179
THR
183
C
ASP
184
n
180
ASP
184
C
ILE
185
n
181
ILE
185
C
SER
186
n
182
SER
186
C
n
1
51
D
n
2
52
D
ARG
53
n
3
ARG
53
D
PRO
54
n
4
PRO
54
D
GLU
55
n
5
GLU
55
D
ILE
56
n
6
ILE
56
D
TRP
57
n
7
TRP
57
D
ILE
58
n
8
ILE
58
D
ALA
59
n
9
ALA
59
D
GLN
60
n
10
GLN
60
D
GLU
61
n
11
GLU
61
D
LEU
62
n
12
LEU
62
D
ARG
63
n
13
ARG
63
D
ARG
64
n
14
ARG
64
D
ILE
65
n
15
ILE
65
D
GLY
66
n
16
GLY
66
D
ASP
67
n
17
ASP
67
D
GLU
68
n
18
GLU
68
D
PHE
69
n
19
PHE
69
D
ASN
70
n
20
ASN
70
D
ALA
71
n
21
ALA
71
D
TYR
72
n
22
TYR
72
D
TYR
73
n
23
TYR
73
D
n
24
74
D
n
25
75
D
n
26
76
D
5.6790
-0.8081
-0.3945
1.8798
0.4938
2.0212
-0.0104
-0.1500
0.2064
-0.4171
-0.0881
0.2642
0.0251
-0.2453
0.1708
0.4404
-0.0665
-0.0946
0.2689
0.0003
0.2455
refined
5.2716
15.6293
-16.6723
X-RAY DIFFRACTION
2.3834
-0.3306
0.3346
2.8322
-0.1196
2.9129
0.0539
0.0916
-0.3169
-0.2235
-0.0566
-0.0886
0.2828
0.0136
0.0292
0.4086
-0.0325
0.0747
0.2404
-0.0352
0.2619
refined
21.5845
-0.1327
-13.2535
X-RAY DIFFRACTION
4.2844
-0.3793
2.5009
1.6320
0.0823
3.6098
0.3518
0.2276
-1.4053
-0.3263
-0.5054
-0.7602
1.4125
0.5326
0.6359
0.7993
0.0441
0.0344
0.2905
0.0337
0.7854
refined
23.8839
-12.1752
-12.9796
X-RAY DIFFRACTION
5.1036
-1.1320
0.2336
1.6172
-0.5769
1.9379
-0.0288
-0.7284
0.4486
-0.0507
-0.1105
-0.0615
-0.5412
0.1319
0.1247
0.5705
-0.1056
0.0550
0.3242
-0.0450
0.3013
refined
20.9653
10.8431
-16.7805
X-RAY DIFFRACTION
2.2848
-0.6808
-0.5175
2.8043
-0.0530
2.5979
0.0289
0.0876
0.3242
-0.2473
-0.0009
0.0110
-0.2823
-0.0155
-0.0417
0.4316
-0.0491
-0.0391
0.2967
0.0132
0.3161
refined
4.7609
26.6355
-13.1270
X-RAY DIFFRACTION
2.3265
-0.6401
-0.4119
1.8178
-0.8566
3.0745
0.1760
0.2295
0.8271
-0.2804
-0.4853
-0.1974
-0.9456
-0.3855
0.2912
0.9029
0.1218
-0.0222
0.3433
0.0009
0.7075
refined
2.8756
38.8158
-12.4239
X-RAY DIFFRACTION
X-RAY DIFFRACTION
1
CHAIN 'A' AND (RESID 51 THROUGH 81 )
X-RAY DIFFRACTION
2
CHAIN 'A' AND (RESID 82 THROUGH 186 )
X-RAY DIFFRACTION
3
CHAIN 'B' AND (RESID 53 THROUGH 74 )
X-RAY DIFFRACTION
4
CHAIN 'C' AND (RESID 51 THROUGH 81 )
X-RAY DIFFRACTION
5
CHAIN 'C' AND (RESID 82 THROUGH 186 )
X-RAY DIFFRACTION
6
CHAIN 'D' AND (RESID 53 THROUGH 73 )
author_and_software_defined_assembly
PISA
8
octameric
24260
-285.7
25780
A
CME
156
S,S-(2-HYDROXYETHYL)THIOCYSTEINE
A
CME
152
CYS
C
CME
156
S,S-(2-HYDROXYETHYL)THIOCYSTEINE
C
CME
152
CYS
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
7_555
y,x,-z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
1
A
CL
1189
F
CL
1
C
CL
1188
I
CL
1
A
MET
5
A
MET
1
1
Y
1
A
GLY
6
A
GLY
2
1
Y
1
A
SER
7
A
SER
3
1
Y
1
A
HIS
8
A
HIS
4
1
Y
1
A
HIS
9
A
HIS
5
1
Y
1
A
HIS
10
A
HIS
6
1
Y
1
A
HIS
11
A
HIS
7
1
Y
1
A
HIS
12
A
HIS
8
1
Y
1
A
HIS
13
A
HIS
9
1
Y
1
A
SER
14
A
SER
10
1
Y
1
A
GLN
15
A
GLN
11
1
Y
1
A
ASP
16
A
ASP
12
1
Y
1
A
PRO
17
A
PRO
13
1
Y
1
A
VAL
18
A
VAL
14
1
Y
1
A
GLN
19
A
GLN
15
1
Y
1
A
ASP
20
A
ASP
16
1
Y
1
A
ILE
21
A
ILE
17
1
Y
1
A
GLU
22
A
GLU
18
1
Y
1
A
ASP
23
A
ASP
19
1
Y
1
A
GLU
24
A
GLU
20
1
Y
1
A
ALA
25
A
ALA
21
1
Y
1
A
SER
26
A
SER
22
1
Y
1
A
ASN
27
A
ASN
23
1
Y
1
A
ASN
28
A
ASN
24
1
Y
1
A
VAL
29
A
VAL
25
1
Y
1
A
ASP
30
A
ASP
26
1
Y
1
A
HIS
31
A
HIS
27
1
Y
1
A
ASP
32
A
ASP
28
1
Y
1
A
TYR
33
A
TYR
29
1
Y
1
A
VAL
34
A
VAL
30
1
Y
1
A
TYR
35
A
TYR
31
1
Y
1
A
PRO
36
A
PRO
32
1
Y
1
A
LEU
37
A
LEU
33
1
Y
1
A
PRO
38
A
PRO
34
1
Y
1
A
GLU
39
A
GLU
35
1
Y
1
A
ASN
40
A
ASN
36
1
Y
1
A
MET
41
A
MET
37
1
Y
1
A
VAL
42
A
VAL
38
1
Y
1
A
TYR
43
A
TYR
39
1
Y
1
A
ARG
44
A
ARG
40
1
Y
1
A
PHE
45
A
PHE
41
1
Y
1
A
ASP
46
A
ASP
42
1
Y
1
A
LYS
47
A
LYS
43
1
Y
1
A
SER
48
A
SER
44
1
Y
1
A
THR
49
A
THR
45
1
Y
1
A
ASN
50
A
ASN
46
1
Y
1
B
ASP
51
B
ASP
1
1
Y
1
B
MET
52
B
MET
2
1
Y
1
B
ARG
75
B
ARG
25
1
Y
1
B
ARG
76
B
ARG
26
1
Y
1
C
MET
5
C
MET
1
1
Y
1
C
GLY
6
C
GLY
2
1
Y
1
C
SER
7
C
SER
3
1
Y
1
C
HIS
8
C
HIS
4
1
Y
1
C
HIS
9
C
HIS
5
1
Y
1
C
HIS
10
C
HIS
6
1
Y
1
C
HIS
11
C
HIS
7
1
Y
1
C
HIS
12
C
HIS
8
1
Y
1
C
HIS
13
C
HIS
9
1
Y
1
C
SER
14
C
SER
10
1
Y
1
C
GLN
15
C
GLN
11
1
Y
1
C
ASP
16
C
ASP
12
1
Y
1
C
PRO
17
C
PRO
13
1
Y
1
C
VAL
18
C
VAL
14
1
Y
1
C
GLN
19
C
GLN
15
1
Y
1
C
ASP
20
C
ASP
16
1
Y
1
C
ILE
21
C
ILE
17
1
Y
1
C
GLU
22
C
GLU
18
1
Y
1
C
ASP
23
C
ASP
19
1
Y
1
C
GLU
24
C
GLU
20
1
Y
1
C
ALA
25
C
ALA
21
1
Y
1
C
SER
26
C
SER
22
1
Y
1
C
ASN
27
C
ASN
23
1
Y
1
C
ASN
28
C
ASN
24
1
Y
1
C
VAL
29
C
VAL
25
1
Y
1
C
ASP
30
C
ASP
26
1
Y
1
C
HIS
31
C
HIS
27
1
Y
1
C
ASP
32
C
ASP
28
1
Y
1
C
TYR
33
C
TYR
29
1
Y
1
C
VAL
34
C
VAL
30
1
Y
1
C
TYR
35
C
TYR
31
1
Y
1
C
PRO
36
C
PRO
32
1
Y
1
C
LEU
37
C
LEU
33
1
Y
1
C
PRO
38
C
PRO
34
1
Y
1
C
GLU
39
C
GLU
35
1
Y
1
C
ASN
40
C
ASN
36
1
Y
1
C
MET
41
C
MET
37
1
Y
1
C
VAL
42
C
VAL
38
1
Y
1
C
TYR
43
C
TYR
39
1
Y
1
C
ARG
44
C
ARG
40
1
Y
1
C
PHE
45
C
PHE
41
1
Y
1
C
ASP
46
C
ASP
42
1
Y
1
C
LYS
47
C
LYS
43
1
Y
1
C
SER
48
C
SER
44
1
Y
1
C
THR
49
C
THR
45
1
Y
1
C
ASN
50
C
ASN
46
1
Y
1
D
ASP
51
D
ASP
1
1
Y
1
D
MET
52
D
MET
2
1
Y
1
D
ALA
74
D
ALA
24
1
Y
1
D
ARG
75
D
ARG
25
1
Y
1
D
ARG
76
D
ARG
26
1
Y
1
A
A
O
O
ILE
HOH
185
2059
2.18
1
A
LEU
55
-104.89
68.77
RESIDUE C156 HARBOURS A COVALENT MODIFICATION THAT WAS INTERPRETED AS BME.
0.2550
0.2148
0.2168
2.10
37.788
1181
23008
5.1
99.77
0.24
1
1.90
MOLECULAR REPLACEMENT
26.06
0.90
1.11
PDB ENTRY 2VTY
ML
FLAT BULK SOLVENT MODEL
2.10
37.788
123
2756
12
0
2621
0.003
2674
0.626
3607
12.875
1007
0.026
404
0.002
453
0.3229
0.2465
2.1956
146
2618
100.00
0.2864
0.2390
2.3113
156
2641
100.00
0.2730
0.2213
2.4561
137
2727
100.00
0.2686
0.2250
2.6457
162
2654
100.00
0.2264
0.2080
2.9119
156
2702
100.00
0.2660
0.2204
3.3330
136
2754
100.00
0.2467
0.1990
4.1984
144
2772
100.00
0.2410
0.2140
37.7936
144
2959
99.00
35.05
2.10
46.54
4D2M
23011
2.0
0.06
1
23.20
11.7
99.9
0.48
2.10
2.21
5.30
1
12
100.0
refinement
PHENIX
(PHENIX.REFINE)
data reduction
XDS
data scaling
SCALA
phasing
PHASER
Vaccinia Virus F1L bound to Bim BH3
1
N
N
2
N
N
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
4
N
N
4
N
N
5
N
N
5
N
N
5
N
N
5
N
N
A
THR
57
A
THR
53
HELX_P
A
LEU
82
A
LEU
78
1
1
26
A
PRO
83
A
PRO
79
HELX_P
A
TYR
104
A
TYR
100
1
2
22
A
TYR
104
A
TYR
100
HELX_P
A
SER
116
A
SER
112
1
3
13
A
THR
121
A
THR
117
HELX_P
A
ASN
136
A
ASN
132
1
4
16
A
GLY
138
A
GLY
134
HELX_P
A
ARG
155
A
ARG
151
1
5
18
A
ASN
158
A
ASN
154
HELX_P
A
CYS
174
A
CYS
170
1
6
17
A
ASP
175
A
ASP
171
HELX_P
A
ILE
185
A
ILE
181
1
7
11
B
ARG
53
B
ARG
3
HELX_P
B
ALA
74
B
ALA
24
1
8
22
C
THR
57
C
THR
53
HELX_P
C
LEU
82
C
LEU
78
1
9
26
C
PRO
83
C
PRO
79
HELX_P
C
TYR
104
C
TYR
100
1
10
22
C
TYR
104
C
TYR
100
HELX_P
C
SER
116
C
SER
112
1
11
13
C
THR
121
C
THR
117
HELX_P
C
ASN
136
C
ASN
132
1
12
16
C
GLY
138
C
GLY
134
HELX_P
C
ARG
155
C
ARG
151
1
13
18
C
ASN
158
C
ASN
154
HELX_P
C
CYS
174
C
CYS
170
1
14
17
C
ASP
175
C
ASP
171
HELX_P
C
SER
186
C
SER
182
1
15
12
D
ARG
53
D
ARG
3
HELX_P
D
TYR
73
D
TYR
23
1
16
21
covale
1.329
both
A
ARG
155
A
C
ARG
151
1_555
A
CME
156
A
N
CME
152
1_555
covale
1.328
both
A
CME
156
A
C
CME
152
1_555
A
MET
157
A
N
MET
153
1_555
covale
1.330
both
C
ARG
155
C
C
ARG
151
1_555
C
CME
156
C
N
CME
152
1_555
covale
1.331
both
C
CME
156
C
C
CME
152
1_555
C
MET
157
C
N
MET
153
1_555
APOPTOSIS
APOPTOSIS
F1_VACCA
UNP
1
O57173
B2L11_HUMAN
UNP
2
O43521
18
186
4D2M
18
186
O57173
A
1
14
182
141
166
4D2M
51
76
O43521
B
2
1
26
18
186
4D2M
18
186
O57173
C
1
14
182
141
166
4D2M
51
76
O43521
D
2
1
26
1
expression tag
MET
5
4D2M
A
O57173
UNP
1
1
expression tag
GLY
6
4D2M
A
O57173
UNP
2
1
expression tag
SER
7
4D2M
A
O57173
UNP
3
1
expression tag
HIS
8
4D2M
A
O57173
UNP
4
1
expression tag
HIS
9
4D2M
A
O57173
UNP
5
1
expression tag
HIS
10
4D2M
A
O57173
UNP
6
1
expression tag
HIS
11
4D2M
A
O57173
UNP
7
1
expression tag
HIS
12
4D2M
A
O57173
UNP
8
1
expression tag
HIS
13
4D2M
A
O57173
UNP
9
1
expression tag
SER
14
4D2M
A
O57173
UNP
10
1
expression tag
GLN
15
4D2M
A
O57173
UNP
11
1
expression tag
ASP
16
4D2M
A
O57173
UNP
12
1
expression tag
PRO
17
4D2M
A
O57173
UNP
13
1
ILE
engineered mutation
PHE
125
4D2M
A
O57173
UNP
125
121
1
LEU
conflict
MET
133
4D2M
A
O57173
UNP
133
129
1
MET
conflict
LEU
134
4D2M
A
O57173
UNP
134
130
3
expression tag
MET
5
4D2M
C
O57173
UNP
1
3
expression tag
GLY
6
4D2M
C
O57173
UNP
2
3
expression tag
SER
7
4D2M
C
O57173
UNP
3
3
expression tag
HIS
8
4D2M
C
O57173
UNP
4
3
expression tag
HIS
9
4D2M
C
O57173
UNP
5
3
expression tag
HIS
10
4D2M
C
O57173
UNP
6
3
expression tag
HIS
11
4D2M
C
O57173
UNP
7
3
expression tag
HIS
12
4D2M
C
O57173
UNP
8
3
expression tag
HIS
13
4D2M
C
O57173
UNP
9
3
expression tag
SER
14
4D2M
C
O57173
UNP
10
3
expression tag
GLN
15
4D2M
C
O57173
UNP
11
3
expression tag
ASP
16
4D2M
C
O57173
UNP
12
3
expression tag
PRO
17
4D2M
C
O57173
UNP
13
3
ILE
engineered mutation
PHE
125
4D2M
C
O57173
UNP
125
121
3
LEU
conflict
MET
133
4D2M
C
O57173
UNP
133
129
3
MET
conflict
LEU
134
4D2M
C
O57173
UNP
134
130
BINDING SITE FOR RESIDUE MRD A 1188
A
MRD
1188
Software
5
BINDING SITE FOR RESIDUE CL A 1189
A
CL
1189
Software
2
BINDING SITE FOR RESIDUE CL C 1188
C
CL
1188
Software
4
BINDING SITE FOR RESIDUE CL A 1190
A
CL
1190
Software
1
BINDING SITE FOR RESIDUE CL A 1191
A
CL
1191
Software
1
A
SER
71
A
SER
67
5
1_555
A
CL
1191
H
CL
5
1_555
C
SER
71
C
SER
67
5
1_555
C
LEU
75
C
LEU
71
5
1_555
C
ILE
163
C
ILE
159
5
1_555
A
LYS
164
A
LYS
160
2
1_555
A
LYS
164
A
LYS
160
2
7_555
C
LYS
161
C
LYS
157
4
7_555
C
LYS
161
C
LYS
157
4
1_555
C
HOH
2043
L
HOH
4
7_555
C
HOH
2043
L
HOH
4
1_555
A
ARG
74
A
ARG
70
1
1_555
A
MRD
1188
E
MRD
1
1_555
92
P 41 21 2