0.012798 0.000000 0.000000 0.000000 0.009869 0.000000 0.000000 0.000000 0.007815 0.00000 0.00000 0.00000 Sevrioukova, I. Poulos, T. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 78.138 101.332 127.966 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C34 H32 Fe N4 O4 616.487 PROTOPORPHYRIN IX CONTAINING FE HEME non-polymer C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C25 H32 N4 O3 S 468.612 tert-butyl [(2S)-1-(1H-indol-3-yl)-3-({3-oxo-3-[(pyridin-3-ylmethyl)amino]propyl}sulfanyl)propan-2-yl]carbamate non-polymer C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N C N 138 N C N 139 N C N 140 N C Y 141 N C Y 142 N C Y 143 N C Y 144 N C N 145 N C N 146 N C N 147 N C N 148 N C N 149 N O N 150 N O N 151 N C N 152 N C N 153 N C N 154 N C N 155 N C N 156 N C N 157 N C Y 158 N C Y 159 N C Y 160 N C Y 161 N C N 162 N C N 163 N C N 164 N C N 165 N C N 166 N C N 167 N C N 168 N C N 169 N C N 170 N C N 171 N C N 172 N C N 173 N O N 174 N O Y 175 N N N 176 N N Y 177 N N N 178 N N N 179 N FE N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N N N 213 S C N 214 N C N 215 N O N 216 N C Y 217 N C Y 218 N N Y 219 N C Y 220 N C Y 221 N N N 222 N O N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N O N 234 N H N 235 N H N 236 N N N 237 S C N 238 N C N 239 N O N 240 S C N 241 N C N 242 N C N 243 N C N 244 N O N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N N N 259 S C N 260 N C N 261 N O N 262 N C N 263 N C N 264 N C N 265 N C N 266 N O N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N N N 281 S C N 282 N C N 283 N O N 284 N C N 285 N C N 286 N C N 287 N C N 288 N N N 289 N O N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N N N 306 S C N 307 N C N 308 N O N 309 N C N 310 N C N 311 N S N 312 N C N 313 N O N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N N N 326 S C N 327 N C N 328 N O N 329 N C Y 330 N C Y 331 N C Y 332 N C Y 333 N C Y 334 N C Y 335 N C N 336 N O N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N C N 349 N C N 350 N C N 351 N C N 352 N O N 353 N C N 354 N O N 355 N N N 356 S C N 357 N C N 358 N S N 359 N C N 360 N C N 361 N C N 362 N O N 363 N N N 364 N C Y 365 N C Y 366 N C Y 367 N C Y 368 N C Y 369 N N Y 370 N C N 371 N C Y 372 N C Y 373 N C Y 374 N N Y 375 N C Y 376 N C Y 377 N C Y 378 N C Y 379 N C Y 380 N C N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N N N 414 S C N 415 N C N 416 N O N 417 N C N 418 N C N 419 N C N 420 N O N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N N N 431 S C N 432 N C N 433 N O N 434 N C N 435 N O N 436 N O N 437 N H N 438 N H N 439 N H N 440 N H N 441 N H N 442 N H N 443 N H N 444 N N N 445 S C N 446 N C N 447 N O N 448 R C N 449 N O N 450 N C N 451 N O N 452 N H N 453 N H N 454 N H N 455 N H N 456 N H N 457 N H N 458 N H N 459 N H N 460 N H N 461 N N N 462 S C N 463 N C N 464 N O N 465 N C Y 466 N C Y 467 N C Y 468 N C Y 469 N N Y 470 N C Y 471 N C Y 472 N C Y 473 N C Y 474 N C N 475 N O N 476 N H N 477 N H N 478 N H N 479 N H N 480 N H N 481 N H N 482 N H N 483 N H N 484 N H N 485 N H N 486 N H N 487 N H N 488 N N N 489 S C N 490 N C N 491 N O N 492 N C Y 493 N C Y 494 N C Y 495 N C Y 496 N C Y 497 N C Y 498 N C N 499 N O N 500 N O N 501 N H N 502 N H N 503 N H N 504 N H N 505 N H N 506 N H N 507 N H N 508 N H N 509 N H N 510 N H N 511 N H N 512 N N N 513 S C N 514 N C N 515 N O N 516 N C N 517 N C N 518 N C N 519 N O N 520 N H N 521 N H N 522 N H N 523 N H N 524 N H N 525 N H N 526 N H N 527 N H N 528 N H N 529 N H N 530 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N doub N 131 N sing N 132 N sing N 133 N doub N 134 N sing N 135 N sing N 136 N doub N 137 N sing N 138 N doub N 139 N sing N 140 N sing Y 141 N doub Y 142 N sing Y 143 N sing N 144 N sing Y 145 N doub N 146 N sing Y 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N doub N 158 N sing N 159 N sing N 160 N sing N 161 N doub N 162 N sing N 163 N sing N 164 N sing N 165 N doub N 166 N sing N 167 N sing N 168 N sing N 169 N doub N 170 N sing N 171 N sing N 172 N sing Y 173 N sing Y 174 N sing Y 175 N doub N 176 N sing Y 177 N sing N 178 N sing Y 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N doub N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N doub N 189 N doub N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N doub N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N doub N 218 N sing N 219 N sing N 220 N sing N 221 N sing Y 222 N sing Y 223 N doub Y 224 N doub N 225 N sing Y 226 N sing N 227 N sing Y 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N doub N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N doub N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N doub N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N doub N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N doub N 326 N sing N 327 N sing N 328 N sing N 329 N sing Y 330 N doub Y 331 N sing Y 332 N sing N 333 N sing Y 334 N doub N 335 N sing Y 336 N doub N 337 N sing Y 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N doub N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N doub N 357 N sing N 358 N sing N 359 N sing Y 360 N doub Y 361 N sing Y 362 N sing Y 363 N doub Y 364 N sing Y 365 N doub N 366 N sing Y 367 N doub Y 368 N sing Y 369 N sing Y 370 N sing Y 371 N doub Y 372 N sing Y 373 N sing Y 374 N doub Y 375 N sing Y 376 N doub N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N doub N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N doub N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N doub N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N doub N 462 N sing N 463 N sing N 464 N sing N 465 N sing Y 466 N doub Y 467 N sing Y 468 N sing N 469 N sing Y 470 N doub Y 471 N sing Y 472 N sing N 473 N sing Y 474 N sing Y 475 N doub N 476 N sing Y 477 N doub N 478 N sing Y 479 N sing N 480 N sing N 481 N sing N 482 N sing N 483 N sing N 484 N sing N 485 N sing N 486 N sing N 487 N sing N 488 N sing N 489 N doub N 490 N sing N 491 N sing N 492 N sing N 493 N sing Y 494 N doub Y 495 N sing Y 496 N sing N 497 N sing Y 498 N doub N 499 N sing Y 500 N doub N 501 N sing Y 502 N sing N 503 N sing N 504 N sing N 505 N sing N 506 N sing N 507 N sing N 508 N sing N 509 N sing N 510 N sing N 511 N sing N 512 N sing N 513 N doub N 514 N sing N 515 N sing N 516 N sing N 517 N sing N 518 N sing N 519 N sing N 520 N sing N 521 N sing N 522 N sing N 523 N sing N 524 N sing US J.Med.Chem. JMCMAR 0151 0022-2623 59 4210 10.1021/ACS.JMEDCHEM.5B01146 26371436 Structure-Based Inhibitor Design for Evaluation of a Cyp3A4 Pharmacophore Model. 2016 10.2210/pdb4d7d/pdb pdb_00004d7d 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 113 1 MIRRORS CCD 2013-07-27 ADSC CCD SINGLE WAVELENGTH M x-ray 1 0.98 1.0 BL11-1 SSRL 0.98 SYNCHROTRON SSRL BEAMLINE BL11-1 55757.812 CYTOCHROME P450 3A4 1.14.13.157, 1.14.13.32, 1.14.13.67, 1.14.13.97 CATALYTIC DOMAIN, UNP RESIDUES 23-503 1 man polymer 616.487 PROTOPORPHYRIN IX CONTAINING FE 1 syn non-polymer 468.612 tert-butyl [(2S)-1-(1H-indol-3-yl)-3-({3-oxo-3-[(pyridin-3-ylmethyl)amino]propyl}sulfanyl)propan-2-yl]carbamate 1 syn non-polymer 18.015 water 10 nat water 1,8-CINEOLE 2-EXO-MONOOXYGENASE, ALBENDAZOLE MONOOXYGENASE, ALBENDAZOLE SULFOXIDASE, CYPIIIA3, CYPIIIA4, CYTOCHROME P450 3A3, CYTOCHROME P450 HLP, CYTOCHROME P450 NF-25, CYTOCHROME P450-PCN1, NIFEDIPINE OXIDASE, QUININE 3-MONOOXYGENASE, TAUROCHENODEOXYCHOLA TE 6-ALPHA-HYDROXYLASE no no MAYLYGTHSHGLFKKLGIPGPTPLPFLGNILSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYS VFTNRRPFGPVGFMKSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYS MDVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESR LEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLP NKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFS KKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGLLQPEKPVVLKVESRDGTV SGAHHHH MAYLYGTHSHGLFKKLGIPGPTPLPFLGNILSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYS VFTNRRPFGPVGFMKSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYS MDVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESR LEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLP NKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFS KKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGLLQPEKPVVLKVESRDGTV SGAHHHH A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n HUMAN sample 9606 HOMO SAPIENS 511693 ESCHERICHIA COLI BL21 PLASMID PCWORI 1 2.53 51.47 NONE MICROBATCH 5.0 MICROBATCH UNDER OIL WITH 11% PEG 3350 AND 60 MM SODIUM MALONATE PH 5.0 exptl_crystal_grow pdbx_database_proc pdbx_database_status struct_biol chem_comp_atom chem_comp_bond database_2 pdbx_database_status pdbx_initial_refinement_model struct_site repository Initial release Database references Database references Data collection Experimental preparation Other Data collection Database references Derived calculations Other Refinement description 1 0 2015-09-23 1 1 2015-09-30 1 2 2016-05-25 1 3 2019-05-08 1 4 2023-12-20 _exptl_crystal_grow.method _pdbx_database_status.recvd_author_approval _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.status_code_sf _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id CYTOCHROME P450 3A4 BOUND TO IMIDAZOLE AND AN INHIBITOR CYTOCHROME P450 3A4 BOUND TO AN INHIBITOR CYTOCHROME P450 3A4 BOUND TO AN INHIBITOR PDBE Y PDBE 2014-11-22 REL REL HEM PROTOPORPHYRIN IX CONTAINING FE PKT tert-butyl [(2S)-1-(1H-indol-3-yl)-3-({3-oxo-3-[(pyridin-3-ylmethyl)amino]propyl}sulfanyl)propan-2-yl]carbamate HOH water NEEDS TO BE NAMED (PKT): FIGURE WITH THE PKT STRUCTURE IS ATTACHED 1TQN PDB ENTRY 1TQN PDB experimental model HEM 1500 2 HEM HEM 1500 A PKT 1600 3 PKT PKT 1600 A HOH 2001 4 HOH HOH 2001 A HOH 2002 4 HOH HOH 2002 A HOH 2003 4 HOH HOH 2003 A HOH 2004 4 HOH HOH 2004 A HOH 2005 4 HOH HOH 2005 A HOH 2006 4 HOH HOH 2006 A HOH 2007 4 HOH HOH 2007 A HOH 2008 4 HOH HOH 2008 A HOH 2009 4 HOH HOH 2009 A HOH 2010 4 HOH HOH 2010 A n 1 21 A n 2 22 A n 3 23 A n 4 24 A n 5 25 A n 6 26 A n 7 27 A n 8 28 A SER 29 n 9 SER 29 A HIS 30 n 10 HIS 30 A GLY 31 n 11 GLY 31 A LEU 32 n 12 LEU 32 A PHE 33 n 13 PHE 33 A LYS 34 n 14 LYS 34 A LYS 35 n 15 LYS 35 A LEU 36 n 16 LEU 36 A GLY 37 n 17 GLY 37 A ILE 38 n 18 ILE 38 A PRO 39 n 19 PRO 39 A GLY 40 n 20 GLY 40 A PRO 41 n 21 PRO 41 A THR 42 n 22 THR 42 A PRO 43 n 23 PRO 43 A LEU 44 n 24 LEU 44 A PRO 45 n 25 PRO 45 A PHE 46 n 26 PHE 46 A LEU 47 n 27 LEU 47 A GLY 48 n 28 GLY 48 A ASN 49 n 29 ASN 49 A ILE 50 n 30 ILE 50 A LEU 51 n 31 LEU 51 A SER 52 n 32 SER 52 A TYR 53 n 33 TYR 53 A HIS 54 n 34 HIS 54 A LYS 55 n 35 LYS 55 A GLY 56 n 36 GLY 56 A PHE 57 n 37 PHE 57 A CYS 58 n 38 CYS 58 A MET 59 n 39 MET 59 A PHE 60 n 40 PHE 60 A ASP 61 n 41 ASP 61 A MET 62 n 42 MET 62 A GLU 63 n 43 GLU 63 A CYS 64 n 44 CYS 64 A HIS 65 n 45 HIS 65 A LYS 66 n 46 LYS 66 A LYS 67 n 47 LYS 67 A TYR 68 n 48 TYR 68 A GLY 69 n 49 GLY 69 A LYS 70 n 50 LYS 70 A VAL 71 n 51 VAL 71 A TRP 72 n 52 TRP 72 A GLY 73 n 53 GLY 73 A PHE 74 n 54 PHE 74 A TYR 75 n 55 TYR 75 A ASP 76 n 56 ASP 76 A GLY 77 n 57 GLY 77 A GLN 78 n 58 GLN 78 A GLN 79 n 59 GLN 79 A PRO 80 n 60 PRO 80 A VAL 81 n 61 VAL 81 A LEU 82 n 62 LEU 82 A ALA 83 n 63 ALA 83 A ILE 84 n 64 ILE 84 A THR 85 n 65 THR 85 A ASP 86 n 66 ASP 86 A PRO 87 n 67 PRO 87 A ASP 88 n 68 ASP 88 A MET 89 n 69 MET 89 A ILE 90 n 70 ILE 90 A LYS 91 n 71 LYS 91 A THR 92 n 72 THR 92 A VAL 93 n 73 VAL 93 A LEU 94 n 74 LEU 94 A VAL 95 n 75 VAL 95 A LYS 96 n 76 LYS 96 A GLU 97 n 77 GLU 97 A CYS 98 n 78 CYS 98 A TYR 99 n 79 TYR 99 A SER 100 n 80 SER 100 A VAL 101 n 81 VAL 101 A PHE 102 n 82 PHE 102 A THR 103 n 83 THR 103 A ASN 104 n 84 ASN 104 A ARG 105 n 85 ARG 105 A ARG 106 n 86 ARG 106 A PRO 107 n 87 PRO 107 A PHE 108 n 88 PHE 108 A GLY 109 n 89 GLY 109 A PRO 110 n 90 PRO 110 A VAL 111 n 91 VAL 111 A GLY 112 n 92 GLY 112 A PHE 113 n 93 PHE 113 A MET 114 n 94 MET 114 A LYS 115 n 95 LYS 115 A SER 116 n 96 SER 116 A ALA 117 n 97 ALA 117 A ILE 118 n 98 ILE 118 A SER 119 n 99 SER 119 A ILE 120 n 100 ILE 120 A ALA 121 n 101 ALA 121 A GLU 122 n 102 GLU 122 A ASP 123 n 103 ASP 123 A GLU 124 n 104 GLU 124 A GLU 125 n 105 GLU 125 A TRP 126 n 106 TRP 126 A LYS 127 n 107 LYS 127 A ARG 128 n 108 ARG 128 A LEU 129 n 109 LEU 129 A ARG 130 n 110 ARG 130 A SER 131 n 111 SER 131 A LEU 132 n 112 LEU 132 A LEU 133 n 113 LEU 133 A SER 134 n 114 SER 134 A PRO 135 n 115 PRO 135 A THR 136 n 116 THR 136 A PHE 137 n 117 PHE 137 A THR 138 n 118 THR 138 A SER 139 n 119 SER 139 A GLY 140 n 120 GLY 140 A LYS 141 n 121 LYS 141 A LEU 142 n 122 LEU 142 A LYS 143 n 123 LYS 143 A GLU 144 n 124 GLU 144 A MET 145 n 125 MET 145 A VAL 146 n 126 VAL 146 A PRO 147 n 127 PRO 147 A ILE 148 n 128 ILE 148 A ILE 149 n 129 ILE 149 A ALA 150 n 130 ALA 150 A GLN 151 n 131 GLN 151 A TYR 152 n 132 TYR 152 A GLY 153 n 133 GLY 153 A ASP 154 n 134 ASP 154 A VAL 155 n 135 VAL 155 A LEU 156 n 136 LEU 156 A VAL 157 n 137 VAL 157 A ARG 158 n 138 ARG 158 A ASN 159 n 139 ASN 159 A LEU 160 n 140 LEU 160 A ARG 161 n 141 ARG 161 A ARG 162 n 142 ARG 162 A GLU 163 n 143 GLU 163 A ALA 164 n 144 ALA 164 A GLU 165 n 145 GLU 165 A THR 166 n 146 THR 166 A GLY 167 n 147 GLY 167 A LYS 168 n 148 LYS 168 A PRO 169 n 149 PRO 169 A VAL 170 n 150 VAL 170 A THR 171 n 151 THR 171 A LEU 172 n 152 LEU 172 A LYS 173 n 153 LYS 173 A ASP 174 n 154 ASP 174 A VAL 175 n 155 VAL 175 A PHE 176 n 156 PHE 176 A GLY 177 n 157 GLY 177 A ALA 178 n 158 ALA 178 A TYR 179 n 159 TYR 179 A SER 180 n 160 SER 180 A MET 181 n 161 MET 181 A ASP 182 n 162 ASP 182 A VAL 183 n 163 VAL 183 A ILE 184 n 164 ILE 184 A THR 185 n 165 THR 185 A SER 186 n 166 SER 186 A THR 187 n 167 THR 187 A SER 188 n 168 SER 188 A PHE 189 n 169 PHE 189 A GLY 190 n 170 GLY 190 A VAL 191 n 171 VAL 191 A ASN 192 n 172 ASN 192 A ILE 193 n 173 ILE 193 A ASP 194 n 174 ASP 194 A SER 195 n 175 SER 195 A LEU 196 n 176 LEU 196 A ASN 197 n 177 ASN 197 A ASN 198 n 178 ASN 198 A PRO 199 n 179 PRO 199 A GLN 200 n 180 GLN 200 A ASP 201 n 181 ASP 201 A PRO 202 n 182 PRO 202 A PHE 203 n 183 PHE 203 A VAL 204 n 184 VAL 204 A GLU 205 n 185 GLU 205 A ASN 206 n 186 ASN 206 A THR 207 n 187 THR 207 A LYS 208 n 188 LYS 208 A LYS 209 n 189 LYS 209 A LEU 210 n 190 LEU 210 A LEU 211 n 191 LEU 211 A ARG 212 n 192 ARG 212 A PHE 213 n 193 PHE 213 A ASP 214 n 194 ASP 214 A PHE 215 n 195 PHE 215 A LEU 216 n 196 LEU 216 A ASP 217 n 197 ASP 217 A PRO 218 n 198 PRO 218 A PHE 219 n 199 PHE 219 A PHE 220 n 200 PHE 220 A LEU 221 n 201 LEU 221 A SER 222 n 202 SER 222 A ILE 223 n 203 ILE 223 A THR 224 n 204 THR 224 A VAL 225 n 205 VAL 225 A PHE 226 n 206 PHE 226 A PRO 227 n 207 PRO 227 A PHE 228 n 208 PHE 228 A LEU 229 n 209 LEU 229 A ILE 230 n 210 ILE 230 A PRO 231 n 211 PRO 231 A ILE 232 n 212 ILE 232 A LEU 233 n 213 LEU 233 A GLU 234 n 214 GLU 234 A VAL 235 n 215 VAL 235 A LEU 236 n 216 LEU 236 A ASN 237 n 217 ASN 237 A ILE 238 n 218 ILE 238 A CYS 239 n 219 CYS 239 A VAL 240 n 220 VAL 240 A PHE 241 n 221 PHE 241 A PRO 242 n 222 PRO 242 A ARG 243 n 223 ARG 243 A GLU 244 n 224 GLU 244 A VAL 245 n 225 VAL 245 A THR 246 n 226 THR 246 A ASN 247 n 227 ASN 247 A PHE 248 n 228 PHE 248 A LEU 249 n 229 LEU 249 A ARG 250 n 230 ARG 250 A LYS 251 n 231 LYS 251 A SER 252 n 232 SER 252 A VAL 253 n 233 VAL 253 A LYS 254 n 234 LYS 254 A ARG 255 n 235 ARG 255 A MET 256 n 236 MET 256 A LYS 257 n 237 LYS 257 A GLU 258 n 238 GLU 258 A SER 259 n 239 SER 259 A ARG 260 n 240 ARG 260 A LEU 261 n 241 LEU 261 A GLU 262 n 242 GLU 262 A ASP 263 n 243 ASP 263 A THR 264 n 244 THR 264 A n 245 265 A n 246 266 A HIS 267 n 247 HIS 267 A ARG 268 n 248 ARG 268 A VAL 269 n 249 VAL 269 A ASP 270 n 250 ASP 270 A PHE 271 n 251 PHE 271 A LEU 272 n 252 LEU 272 A GLN 273 n 253 GLN 273 A LEU 274 n 254 LEU 274 A MET 275 n 255 MET 275 A ILE 276 n 256 ILE 276 A ASP 277 n 257 ASP 277 A SER 278 n 258 SER 278 A GLN 279 n 259 GLN 279 A ASN 280 n 260 ASN 280 A n 261 281 A n 262 282 A n 263 283 A n 264 284 A n 265 285 A n 266 286 A n 267 287 A n 268 288 A ALA 289 n 269 ALA 289 A LEU 290 n 270 LEU 290 A SER 291 n 271 SER 291 A ASP 292 n 272 ASP 292 A LEU 293 n 273 LEU 293 A GLU 294 n 274 GLU 294 A LEU 295 n 275 LEU 295 A VAL 296 n 276 VAL 296 A ALA 297 n 277 ALA 297 A GLN 298 n 278 GLN 298 A SER 299 n 279 SER 299 A ILE 300 n 280 ILE 300 A ILE 301 n 281 ILE 301 A PHE 302 n 282 PHE 302 A ILE 303 n 283 ILE 303 A PHE 304 n 284 PHE 304 A ALA 305 n 285 ALA 305 A GLY 306 n 286 GLY 306 A TYR 307 n 287 TYR 307 A GLU 308 n 288 GLU 308 A THR 309 n 289 THR 309 A THR 310 n 290 THR 310 A SER 311 n 291 SER 311 A SER 312 n 292 SER 312 A VAL 313 n 293 VAL 313 A LEU 314 n 294 LEU 314 A SER 315 n 295 SER 315 A PHE 316 n 296 PHE 316 A ILE 317 n 297 ILE 317 A MET 318 n 298 MET 318 A TYR 319 n 299 TYR 319 A GLU 320 n 300 GLU 320 A LEU 321 n 301 LEU 321 A ALA 322 n 302 ALA 322 A THR 323 n 303 THR 323 A HIS 324 n 304 HIS 324 A PRO 325 n 305 PRO 325 A ASP 326 n 306 ASP 326 A VAL 327 n 307 VAL 327 A GLN 328 n 308 GLN 328 A GLN 329 n 309 GLN 329 A LYS 330 n 310 LYS 330 A LEU 331 n 311 LEU 331 A GLN 332 n 312 GLN 332 A GLU 333 n 313 GLU 333 A GLU 334 n 314 GLU 334 A ILE 335 n 315 ILE 335 A ASP 336 n 316 ASP 336 A ALA 337 n 317 ALA 337 A VAL 338 n 318 VAL 338 A LEU 339 n 319 LEU 339 A PRO 340 n 320 PRO 340 A ASN 341 n 321 ASN 341 A LYS 342 n 322 LYS 342 A ALA 343 n 323 ALA 343 A PRO 344 n 324 PRO 344 A PRO 345 n 325 PRO 345 A THR 346 n 326 THR 346 A TYR 347 n 327 TYR 347 A ASP 348 n 328 ASP 348 A THR 349 n 329 THR 349 A VAL 350 n 330 VAL 350 A LEU 351 n 331 LEU 351 A GLN 352 n 332 GLN 352 A MET 353 n 333 MET 353 A GLU 354 n 334 GLU 354 A TYR 355 n 335 TYR 355 A LEU 356 n 336 LEU 356 A ASP 357 n 337 ASP 357 A MET 358 n 338 MET 358 A VAL 359 n 339 VAL 359 A VAL 360 n 340 VAL 360 A ASN 361 n 341 ASN 361 A GLU 362 n 342 GLU 362 A THR 363 n 343 THR 363 A LEU 364 n 344 LEU 364 A ARG 365 n 345 ARG 365 A LEU 366 n 346 LEU 366 A PHE 367 n 347 PHE 367 A PRO 368 n 348 PRO 368 A ILE 369 n 349 ILE 369 A ALA 370 n 350 ALA 370 A MET 371 n 351 MET 371 A ARG 372 n 352 ARG 372 A LEU 373 n 353 LEU 373 A GLU 374 n 354 GLU 374 A ARG 375 n 355 ARG 375 A VAL 376 n 356 VAL 376 A CYS 377 n 357 CYS 377 A LYS 378 n 358 LYS 378 A LYS 379 n 359 LYS 379 A ASP 380 n 360 ASP 380 A VAL 381 n 361 VAL 381 A GLU 382 n 362 GLU 382 A ILE 383 n 363 ILE 383 A ASN 384 n 364 ASN 384 A GLY 385 n 365 GLY 385 A MET 386 n 366 MET 386 A PHE 387 n 367 PHE 387 A ILE 388 n 368 ILE 388 A PRO 389 n 369 PRO 389 A LYS 390 n 370 LYS 390 A GLY 391 n 371 GLY 391 A VAL 392 n 372 VAL 392 A VAL 393 n 373 VAL 393 A VAL 394 n 374 VAL 394 A MET 395 n 375 MET 395 A ILE 396 n 376 ILE 396 A PRO 397 n 377 PRO 397 A SER 398 n 378 SER 398 A TYR 399 n 379 TYR 399 A ALA 400 n 380 ALA 400 A LEU 401 n 381 LEU 401 A HIS 402 n 382 HIS 402 A ARG 403 n 383 ARG 403 A ASP 404 n 384 ASP 404 A PRO 405 n 385 PRO 405 A LYS 406 n 386 LYS 406 A TYR 407 n 387 TYR 407 A TRP 408 n 388 TRP 408 A THR 409 n 389 THR 409 A GLU 410 n 390 GLU 410 A PRO 411 n 391 PRO 411 A GLU 412 n 392 GLU 412 A LYS 413 n 393 LYS 413 A PHE 414 n 394 PHE 414 A LEU 415 n 395 LEU 415 A PRO 416 n 396 PRO 416 A GLU 417 n 397 GLU 417 A ARG 418 n 398 ARG 418 A PHE 419 n 399 PHE 419 A SER 420 n 400 SER 420 A LYS 421 n 401 LYS 421 A LYS 422 n 402 LYS 422 A ASN 423 n 403 ASN 423 A LYS 424 n 404 LYS 424 A ASP 425 n 405 ASP 425 A ASN 426 n 406 ASN 426 A ILE 427 n 407 ILE 427 A ASP 428 n 408 ASP 428 A PRO 429 n 409 PRO 429 A TYR 430 n 410 TYR 430 A ILE 431 n 411 ILE 431 A TYR 432 n 412 TYR 432 A THR 433 n 413 THR 433 A PRO 434 n 414 PRO 434 A PHE 435 n 415 PHE 435 A GLY 436 n 416 GLY 436 A SER 437 n 417 SER 437 A GLY 438 n 418 GLY 438 A PRO 439 n 419 PRO 439 A ARG 440 n 420 ARG 440 A ASN 441 n 421 ASN 441 A CYS 442 n 422 CYS 442 A ILE 443 n 423 ILE 443 A GLY 444 n 424 GLY 444 A MET 445 n 425 MET 445 A ARG 446 n 426 ARG 446 A PHE 447 n 427 PHE 447 A ALA 448 n 428 ALA 448 A LEU 449 n 429 LEU 449 A MET 450 n 430 MET 450 A ASN 451 n 431 ASN 451 A MET 452 n 432 MET 452 A LYS 453 n 433 LYS 453 A LEU 454 n 434 LEU 454 A ALA 455 n 435 ALA 455 A LEU 456 n 436 LEU 456 A ILE 457 n 437 ILE 457 A ARG 458 n 438 ARG 458 A VAL 459 n 439 VAL 459 A LEU 460 n 440 LEU 460 A GLN 461 n 441 GLN 461 A ASN 462 n 442 ASN 462 A PHE 463 n 443 PHE 463 A SER 464 n 444 SER 464 A PHE 465 n 445 PHE 465 A LYS 466 n 446 LYS 466 A PRO 467 n 447 PRO 467 A CYS 468 n 448 CYS 468 A LYS 469 n 449 LYS 469 A GLU 470 n 450 GLU 470 A THR 471 n 451 THR 471 A GLN 472 n 452 GLN 472 A ILE 473 n 453 ILE 473 A PRO 474 n 454 PRO 474 A LEU 475 n 455 LEU 475 A LYS 476 n 456 LYS 476 A LEU 477 n 457 LEU 477 A SER 478 n 458 SER 478 A LEU 479 n 459 LEU 479 A GLY 480 n 460 GLY 480 A GLY 481 n 461 GLY 481 A LEU 482 n 462 LEU 482 A LEU 483 n 463 LEU 483 A GLN 484 n 464 GLN 484 A PRO 485 n 465 PRO 485 A GLU 486 n 466 GLU 486 A LYS 487 n 467 LYS 487 A PRO 488 n 468 PRO 488 A VAL 489 n 469 VAL 489 A VAL 490 n 470 VAL 490 A LEU 491 n 471 LEU 491 A LYS 492 n 472 LYS 492 A VAL 493 n 473 VAL 493 A GLU 494 n 474 GLU 494 A SER 495 n 475 SER 495 A ARG 496 n 476 ARG 496 A ASP 497 n 477 ASP 497 A n 478 498 A n 479 499 A n 480 500 A n 481 501 A n 482 502 A n 483 503 A n 484 504 A n 485 505 A n 486 506 A n 487 507 A 2.1436 1.3521 0.6070 4.6299 0.9822 2.3950 -0.1209 -0.1248 0.2489 -0.5207 0.0174 0.0311 -0.3763 -0.1712 0.1034 0.1015 0.0227 -0.0039 0.1980 -0.0427 0.1049 refined -19.5430 23.9665 13.0517 X-RAY DIFFRACTION A 29 A 497 X-RAY DIFFRACTION 1 author_defined_assembly 1 monomeric A CYS 442 A SG CYS 422 1_555 A HEM 1500 B FE HEM 1_555 A HEM 1500 B NA HEM 1_555 113.0 A CYS 442 A SG CYS 422 1_555 A HEM 1500 B FE HEM 1_555 A HEM 1500 B NB HEM 1_555 94.2 A HEM 1500 B NA HEM 1_555 A HEM 1500 B FE HEM 1_555 A HEM 1500 B NB HEM 1_555 84.1 A CYS 442 A SG CYS 422 1_555 A HEM 1500 B FE HEM 1_555 A HEM 1500 B NC HEM 1_555 97.3 A HEM 1500 B NA HEM 1_555 A HEM 1500 B FE HEM 1_555 A HEM 1500 B NC HEM 1_555 149.3 A HEM 1500 B NB HEM 1_555 A HEM 1500 B FE HEM 1_555 A HEM 1500 B NC HEM 1_555 89.7 A CYS 442 A SG CYS 422 1_555 A HEM 1500 B FE HEM 1_555 A HEM 1500 B ND HEM 1_555 101.6 A HEM 1500 B NA HEM 1_555 A HEM 1500 B FE HEM 1_555 A HEM 1500 B ND HEM 1_555 87.6 A HEM 1500 B NB HEM 1_555 A HEM 1500 B FE HEM 1_555 A HEM 1500 B ND HEM 1_555 164.0 A HEM 1500 B NC HEM 1_555 A HEM 1500 B FE HEM 1_555 A HEM 1500 B ND HEM 1_555 90.5 A CYS 442 A SG CYS 422 1_555 A HEM 1500 B FE HEM 1_555 A PKT 1600 C N22 PKT 1_555 173.3 A HEM 1500 B NA HEM 1_555 A HEM 1500 B FE HEM 1_555 A PKT 1600 C N22 PKT 1_555 73.6 A HEM 1500 B NB HEM 1_555 A HEM 1500 B FE HEM 1_555 A PKT 1600 C N22 PKT 1_555 85.2 A HEM 1500 B NC HEM 1_555 A HEM 1500 B FE HEM 1_555 A PKT 1600 C N22 PKT 1_555 76.0 A HEM 1500 B ND HEM 1_555 A HEM 1500 B FE HEM 1_555 A PKT 1600 C N22 PKT 1_555 79.3 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N ASP 76 A N ASP 56 A O GLN 79 A O GLN 59 A N LEU 82 A N LEU 62 A O VAL 393 A O VAL 373 A N ILE 396 A N ILE 376 A O LEU 373 A O LEU 353 A N VAL 170 A N VAL 150 A O LEU 491 A O LEU 471 A N GLU 494 A N GLU 474 A O SER 464 A O SER 444 A N ILE 383 A N ILE 363 A O MET 386 A O MET 366 1 A CA ASP 497 A CA ASP 477 1 Y 1 A C ASP 497 A C ASP 477 1 Y 1 A O ASP 497 A O ASP 477 1 Y 1 A CB ASP 497 A CB ASP 477 1 Y 1 A CG ASP 497 A CG ASP 477 1 Y 1 A OD1 ASP 497 A OD1 ASP 477 1 Y 1 A OD2 ASP 497 A OD2 ASP 477 1 Y 1 A MET 21 A MET 1 1 Y 1 A ALA 22 A ALA 2 1 Y 1 A TYR 23 A TYR 3 1 Y 1 A LEU 24 A LEU 4 1 Y 1 A TYR 25 A TYR 5 1 Y 1 A GLY 26 A GLY 6 1 Y 1 A THR 27 A THR 7 1 Y 1 A HIS 28 A HIS 8 1 Y 1 A GLN 265 A GLN 245 1 Y 1 A LYS 266 A LYS 246 1 Y 1 A SER 281 A SER 261 1 Y 1 A LYS 282 A LYS 262 1 Y 1 A GLU 283 A GLU 263 1 Y 1 A THR 284 A THR 264 1 Y 1 A GLU 285 A GLU 265 1 Y 1 A SER 286 A SER 266 1 Y 1 A HIS 287 A HIS 267 1 Y 1 A LYS 288 A LYS 268 1 Y 1 A GLY 498 A GLY 478 1 Y 1 A THR 499 A THR 479 1 Y 1 A VAL 500 A VAL 480 1 Y 1 A SER 501 A SER 481 1 Y 1 A GLY 502 A GLY 482 1 Y 1 A ALA 503 A ALA 483 1 Y 1 A HIS 504 A HIS 484 1 Y 1 A HIS 505 A HIS 485 1 Y 1 A HIS 506 A HIS 486 1 Y 1 A HIS 507 A HIS 487 1 Y 1 A ARG 268 0.234 SIDE CHAIN 1 9.67 1.50 119.30 128.97 A A A C N CA LYS PRO PRO 168 169 169 Y 1 A PHE 46 70.86 -49.21 1 A VAL 95 -120.94 -58.62 1 A VAL 101 -133.07 -57.03 1 A ASP 123 39.60 -133.71 1 A PRO 135 -59.28 -1.56 1 A THR 138 -123.39 -165.75 1 A PRO 169 -44.81 166.22 1 A PRO 199 -76.23 29.64 1 A PHE 219 -62.17 -70.22 1 A VAL 225 144.02 -16.84 1 A PHE 226 -143.31 54.19 1 A PHE 241 -155.65 50.18 1 A PRO 242 -43.29 84.30 1 A ARG 243 72.98 -21.52 1 A PHE 248 -54.44 -70.89 1 A LEU 261 -43.28 -15.12 1 A MET 371 71.64 -55.93 1 A GLU 410 38.22 67.06 1 A THR 433 -141.23 59.99 1 A CYS 468 -129.26 -158.46 109.133 0.05 0 0 -0.05 0 0 0.964 0.925 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. RESIDUES 265-266 AND 281-288 ARE DISORDERED 0.27778 0.20030 0.20401 2.76 37.44 645 12401 4.9 97.25 41.794 0.380 RANDOM 1 THROUGHOUT 0 MOLECULAR REPLACEMENT 0 0.435 0.80 0.80 1.20 PDB ENTRY 1TQN MAXIMUM LIKELIHOOD MASK 2.76 37.44 10 3775 76 0 3689 0.009 0.020 3863 1.934 2.013 5240 6.451 5.000 455 34.706 23.851 161 20.045 15.000 689 14.241 15.000 22 0.097 0.200 575 0.008 0.021 2879 0.356 0.325 2.833 36 656 20 74.49 2.76 37.40 4D7D 13205 2.0 0.08 1 13.70 9.6 98.3 1.50 2.76 2.91 1.10 1 8.0 89.0 refinement REFMAC 5.6 data reduction MOSFLM data scaling SCALA phasing PHASER Cytochrome P450 3A4 bound to an inhibitor 1 N N 2 N N 3 N N 4 N N A GLY 31 A GLY 11 HELX_P A LEU 36 A LEU 16 1 1 6 A ASN 49 A ASN 29 HELX_P A LYS 55 A LYS 35 5 2 7 A GLY 56 A GLY 36 HELX_P A GLY 69 A GLY 49 1 3 14 A ASP 86 A ASP 66 HELX_P A VAL 95 A VAL 75 1 4 10 A VAL 111 A VAL 91 HELX_P A ALA 117 A ALA 97 5 5 7 A GLU 122 A GLU 102 HELX_P A SER 134 A SER 114 1 6 13 A PRO 135 A PRO 115 HELX_P A PHE 137 A PHE 117 5 7 3 A THR 138 A THR 118 HELX_P A GLU 144 A GLU 124 1 8 7 A MET 145 A MET 125 HELX_P A GLY 167 A GLY 147 1 9 23 A LEU 172 A LEU 152 HELX_P A GLY 190 A GLY 170 1 10 19 A ASP 194 A ASP 174 HELX_P A ASN 198 A ASN 178 5 11 5 A ASP 201 A ASP 181 HELX_P A LYS 209 A LYS 189 1 12 9 A ASP 217 A ASP 197 HELX_P A THR 224 A THR 204 1 13 8 A PHE 226 A PHE 206 HELX_P A PHE 228 A PHE 208 5 14 3 A LEU 229 A LEU 209 HELX_P A ASN 237 A ASN 217 1 15 9 A ARG 243 A ARG 223 HELX_P A LEU 261 A LEU 241 1 16 19 A ASP 270 A ASP 250 HELX_P A SER 278 A SER 258 1 17 9 A SER 291 A SER 271 HELX_P A HIS 324 A HIS 304 1 18 34 A HIS 324 A HIS 304 HELX_P A LEU 339 A LEU 319 1 19 16 A THR 346 A THR 326 HELX_P A MET 353 A MET 333 1 20 8 A MET 353 A MET 333 HELX_P A PHE 367 A PHE 347 1 21 15 A PRO 397 A PRO 377 HELX_P A HIS 402 A HIS 382 1 22 6 A LEU 415 A LEU 395 HELX_P A SER 420 A SER 400 5 23 6 A GLY 444 A GLY 424 HELX_P A GLN 461 A GLN 441 1 24 18 metalc 2.246 A CYS 442 A SG CYS 422 1_555 A HEM 1500 B FE HEM 1_555 metalc 2.008 A HEM 1500 B FE HEM 1_555 A PKT 1600 C N22 PKT 1_555 OXIDOREDUCTASE OXIDOREDUCTASE, MONOOXYGENASE, HUMAN CYP3A4, INHIBITORY COMPLEX A ILE 473 A ILE 453 1 A PRO 474 A PRO 454 -5.02 CP3A4_HUMAN UNP 1 P08684 23 503 4D7D 23 503 P08684 A 1 3 483 1 expression tag MET 21 4D7D A P08684 UNP 1 1 expression tag ALA 22 4D7D A P08684 UNP 2 1 expression tag HIS 504 4D7D A P08684 UNP 484 1 expression tag HIS 505 4D7D A P08684 UNP 485 1 expression tag HIS 506 4D7D A P08684 UNP 486 1 expression tag HIS 507 4D7D A P08684 UNP 487 4 3 2 anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel A VAL 71 A VAL 51 A ASP 76 A ASP 56 A GLN 79 A GLN 59 A ILE 84 A ILE 64 A VAL 393 A VAL 373 A ILE 396 A ILE 376 A LEU 373 A LEU 353 A VAL 376 A VAL 356 A VAL 170 A VAL 150 A THR 171 A THR 151 A VAL 490 A VAL 470 A SER 495 A SER 475 A PHE 463 A PHE 443 A LYS 466 A LYS 446 A VAL 381 A VAL 361 A ILE 383 A ILE 363 A MET 386 A MET 366 A ILE 388 A ILE 368 BINDING SITE FOR RESIDUE HEM A 1500 A HEM 1500 Software 21 BINDING SITE FOR RESIDUE PKT A 1600 A PKT 1600 Software 9 A ARG 105 A ARG 85 21 1_555 A ILE 118 A ILE 98 21 1_555 A SER 119 A SER 99 21 1_555 A TRP 126 A TRP 106 21 1_555 A ARG 130 A ARG 110 21 1_555 A PHE 137 A PHE 117 21 1_555 A ALA 305 A ALA 285 21 1_555 A THR 309 A THR 289 21 1_555 A VAL 313 A VAL 293 21 1_555 A ALA 370 A ALA 350 21 1_555 A LEU 373 A LEU 353 21 1_555 A ARG 375 A ARG 355 21 1_555 A PRO 434 A PRO 414 21 1_555 A PHE 435 A PHE 415 21 1_555 A GLY 436 A GLY 416 21 1_555 A SER 437 A SER 417 21 1_555 A ARG 440 A ARG 420 21 1_555 A ASN 441 A ASN 421 21 1_555 A CYS 442 A CYS 422 21 1_555 A GLY 444 A GLY 424 21 1_555 A PKT 1600 C PKT 21 1_555 A ARG 105 A ARG 85 9 1_555 A PHE 108 A PHE 88 9 1_555 A SER 119 A SER 99 9 1_555 A LEU 211 A LEU 191 9 1_555 A PHE 304 A PHE 284 9 1_555 A ALA 305 A ALA 285 9 1_555 A THR 309 A THR 289 9 1_555 A ILE 369 A ILE 349 9 1_555 A HEM 1500 B HEM 9 1_555 23 I 2 2 2